Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0837410 | XP_003611971.1 | 99.415 | 171 | 1 | 0 | 1 | 171 | 1 | 171 | 1.44e-122 | 352 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0837410 | G7KC97 | 99.415 | 171 | 1 | 0 | 1 | 171 | 1 | 171 | 6.87e-123 | 352 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000880 | Msa0837410 | 0.825524 | 4.473575e-54 | -8.615850e-47 |
Msa0002680 | Msa0837410 | 0.845971 | 2.910982e-59 | -8.615850e-47 |
Msa0002710 | Msa0837410 | 0.824977 | 6.024471e-54 | -8.615850e-47 |
Msa0003220 | Msa0837410 | 0.812255 | 4.647491e-51 | -8.615850e-47 |
Msa0007970 | Msa0837410 | 0.808076 | 3.699870e-50 | -8.615850e-47 |
Msa0011930 | Msa0837410 | 0.822006 | 2.984182e-53 | -8.615850e-47 |
Msa0012220 | Msa0837410 | 0.817045 | 4.042837e-52 | -8.615850e-47 |
Msa0012940 | Msa0837410 | 0.835631 | 1.499777e-56 | -8.615850e-47 |
Msa0014570 | Msa0837410 | 0.826691 | 2.360684e-54 | -8.615850e-47 |
Msa0031820 | Msa0837410 | 0.812681 | 3.751377e-51 | -8.615850e-47 |
Msa0032320 | Msa0837410 | 0.803687 | 3.094900e-49 | -8.615850e-47 |
Msa0033880 | Msa0837410 | 0.807890 | 4.052158e-50 | -8.615850e-47 |
Msa0035120 | Msa0837410 | 0.844717 | 6.360294e-59 | -8.615850e-47 |
Msa0039250 | Msa0837410 | 0.816122 | 6.507455e-52 | -8.615850e-47 |
Msa0039570 | Msa0837410 | 0.826317 | 2.898325e-54 | -8.615850e-47 |
Msa0041690 | Msa0837410 | 0.824672 | 7.108894e-54 | -8.615850e-47 |
Msa0049780 | Msa0837410 | 0.807513 | 4.871769e-50 | -8.615850e-47 |
Msa0052870 | Msa0837410 | 0.897912 | 8.865756e-77 | -8.615850e-47 |
Msa0054820 | Msa0837410 | 0.804333 | 2.271465e-49 | -8.615850e-47 |
Msa0056450 | Msa0837410 | 0.814419 | 1.555581e-51 | -8.615850e-47 |
Msa0061340 | Msa0837410 | 0.805282 | 1.439476e-49 | -8.615850e-47 |
Msa0069600 | Msa0837410 | 0.805910 | 1.062488e-49 | -8.615850e-47 |
Msa0077540 | Msa0837410 | 0.811238 | 7.738325e-51 | -8.615850e-47 |
Msa0093850 | Msa0837410 | 0.833664 | 4.684668e-56 | -8.615850e-47 |
Msa0098470 | Msa0837410 | 0.817424 | 3.321375e-52 | -8.615850e-47 |
Msa0100160 | Msa0837410 | 0.802421 | 5.654362e-49 | -8.615850e-47 |
Msa0101880 | Msa0837410 | 0.805641 | 1.210433e-49 | -8.615850e-47 |
Msa0106620 | Msa0837410 | 0.829070 | 6.321674e-55 | -8.615850e-47 |
Msa0106710 | Msa0837410 | 0.804512 | 2.084641e-49 | -8.615850e-47 |
Msa0108390 | Msa0837410 | 0.852945 | 3.309039e-61 | -8.615850e-47 |
Msa0115090 | Msa0837410 | 0.827508 | 1.504831e-54 | -8.615850e-47 |
Msa0116790 | Msa0837410 | 0.869902 | 2.185856e-66 | -8.615850e-47 |
Msa0119320 | Msa0837410 | 0.813846 | 2.081531e-51 | -8.615850e-47 |
Msa0613710 | Msa0837410 | 0.812099 | 5.026755e-51 | -8.615850e-47 |
Msa0615420 | Msa0837410 | 0.819451 | 1.153770e-52 | -8.615850e-47 |
Msa0616450 | Msa0837410 | 0.802154 | 6.418459e-49 | -8.615850e-47 |
Msa0619420 | Msa0837410 | 0.807870 | 4.092826e-50 | -8.615850e-47 |
Msa0624940 | Msa0837410 | 0.801175 | 1.019443e-48 | -8.615850e-47 |
Msa0626270 | Msa0837410 | 0.817074 | 3.981931e-52 | -8.615850e-47 |
Msa0628420 | Msa0837410 | 0.817890 | 2.607584e-52 | -8.615850e-47 |
Msa0630940 | Msa0837410 | 0.805627 | 1.218565e-49 | -8.615850e-47 |
Msa0640500 | Msa0837410 | 0.824441 | 8.056503e-54 | -8.615850e-47 |
Msa0655920 | Msa0837410 | 0.813296 | 2.749563e-51 | -8.615850e-47 |
Msa0664540 | Msa0837410 | 0.814205 | 1.734618e-51 | -8.615850e-47 |
Msa0664600 | Msa0837410 | 0.808226 | 3.436357e-50 | -8.615850e-47 |
Msa0669180 | Msa0837410 | 0.857383 | 1.694653e-62 | -8.615850e-47 |
Msa0679100 | Msa0837410 | 0.848414 | 6.222440e-60 | -8.615850e-47 |
Msa0689760 | Msa0837410 | 0.852283 | 5.109022e-61 | -8.615850e-47 |
Msa0692880 | Msa0837410 | 0.834494 | 2.902554e-56 | -8.615850e-47 |
Msa0698100 | Msa0837410 | 0.827156 | 1.827894e-54 | -8.615850e-47 |
Msa0698640 | Msa0837410 | 0.815328 | 9.778530e-52 | -8.615850e-47 |
Msa0706760 | Msa0837410 | 0.818049 | 2.400800e-52 | -8.615850e-47 |
Msa0710270 | Msa0837410 | 0.804537 | 2.059564e-49 | -8.615850e-47 |
Msa0716410 | Msa0837410 | 0.843145 | 1.677779e-58 | -8.615850e-47 |
Msa0716860 | Msa0837410 | 0.861686 | 8.614759e-64 | -8.615850e-47 |
Msa0744100 | Msa0837410 | 0.819138 | 1.359169e-52 | -8.615850e-47 |
Msa0749400 | Msa0837410 | 0.832603 | 8.605508e-56 | -8.615850e-47 |
Msa0751260 | Msa0837410 | 0.836880 | 7.217824e-57 | -8.615850e-47 |
Msa0753770 | Msa0837410 | 0.804673 | 1.930049e-49 | -8.615850e-47 |
Msa0757800 | Msa0837410 | 0.854374 | 1.284423e-61 | -8.615850e-47 |
Msa0779550 | Msa0837410 | 0.811839 | 5.727649e-51 | -8.615850e-47 |
Msa0788110 | Msa0837410 | 0.814044 | 1.882722e-51 | -8.615850e-47 |
Msa0788120 | Msa0837410 | 0.802801 | 4.722722e-49 | -8.615850e-47 |
Msa0788770 | Msa0837410 | 0.812778 | 3.572534e-51 | -8.615850e-47 |
Msa0795070 | Msa0837410 | 0.821442 | 4.029502e-53 | -8.615850e-47 |
Msa0799000 | Msa0837410 | 0.882444 | 1.036887e-70 | -8.615850e-47 |
Msa0800700 | Msa0837410 | 0.814322 | 1.634291e-51 | -8.615850e-47 |
Msa0825270 | Msa0837410 | 0.812947 | 3.280926e-51 | -8.615850e-47 |
Msa0837410 | Msa0861510 | 0.808372 | 3.198543e-50 | -8.615850e-47 |
Msa0837410 | Msa0861530 | 0.808038 | 3.769463e-50 | -8.615850e-47 |
Msa0837410 | Msa0861600 | 0.802502 | 5.442174e-49 | -8.615850e-47 |
Msa0837410 | Msa0865570 | 0.804686 | 1.917652e-49 | -8.615850e-47 |
Msa0837410 | Msa0868160 | 0.801832 | 7.475145e-49 | -8.615850e-47 |
Msa0837410 | Msa0870650 | 0.822394 | 2.425819e-53 | -8.615850e-47 |
Msa0837410 | Msa0937020 | 0.806311 | 8.749211e-50 | -8.615850e-47 |
Msa0837410 | Msa0947530 | -0.808958 | 2.397894e-50 | -8.615850e-47 |
Msa0837410 | Msa0990590 | 0.806728 | 7.143355e-50 | -8.615850e-47 |
Msa0837410 | Msa1010070 | 0.815549 | 8.733711e-52 | -8.615850e-47 |
Msa0837410 | Msa1016620 | 0.802920 | 4.461439e-49 | -8.615850e-47 |
Msa0837410 | Msa1022820 | 0.820159 | 7.946738e-53 | -8.615850e-47 |
Msa0837410 | Msa1027250 | 0.823447 | 1.378547e-53 | -8.615850e-47 |
Msa0837410 | Msa1027300 | 0.805886 | 1.074866e-49 | -8.615850e-47 |
Msa0837410 | Msa1027360 | 0.830962 | 2.185286e-55 | -8.615850e-47 |
Msa0837410 | Msa1028280 | 0.816728 | 4.762569e-52 | -8.615850e-47 |
Msa0837410 | Msa1034500 | 0.803158 | 3.983465e-49 | -8.615850e-47 |
Msa0837410 | Msa1036280 | 0.824424 | 8.131203e-54 | -8.615850e-47 |
Msa0837410 | Msa1038080 | 0.809255 | 2.070912e-50 | -8.615850e-47 |
Msa0837410 | Msa1050910 | 0.830556 | 2.747184e-55 | -8.615850e-47 |
Msa0837410 | Msa1050960 | 0.840339 | 9.231128e-58 | -8.615850e-47 |
Msa0837410 | Msa1059960 | 0.804705 | 1.900317e-49 | -8.615850e-47 |
Msa0837410 | Msa1061980 | 0.830687 | 2.551944e-55 | -8.615850e-47 |
Msa0837410 | Msa1068100 | 0.807319 | 5.355771e-50 | -8.615850e-47 |
Msa0837410 | Msa1072600 | 0.813418 | 2.585937e-51 | -8.615850e-47 |
Msa0837410 | Msa1076560 | 0.832228 | 1.065677e-55 | -8.615850e-47 |
Msa0837410 | Msa1088410 | 0.821764 | 3.393745e-53 | -8.615850e-47 |
Msa0837410 | Msa1098890 | 0.806823 | 6.822356e-50 | -8.615850e-47 |
Msa0837410 | Msa1113590 | 0.801435 | 9.017490e-49 | -8.615850e-47 |
Msa0837410 | Msa1129690 | 0.812274 | 4.602983e-51 | -8.615850e-47 |
Msa0837410 | Msa1168590 | 0.808993 | 2.356579e-50 | -8.615850e-47 |
Msa0837410 | Msa1169720 | 0.804624 | 1.975374e-49 | -8.615850e-47 |
Msa0837410 | Msa1174530 | 0.803265 | 3.785333e-49 | -8.615850e-47 |
Msa0837410 | Msa1181170 | -0.832315 | 1.014185e-55 | -8.615850e-47 |
Msa0837410 | Msa1188560 | 0.834607 | 2.718304e-56 | -8.615850e-47 |
Msa0837410 | Msa1201640 | 0.818821 | 1.604852e-52 | -8.615850e-47 |
Msa0837410 | Msa1204100 | -0.823752 | 1.169754e-53 | -8.615850e-47 |
Msa0837410 | Msa1208160 | 0.800939 | 1.139125e-48 | -8.615850e-47 |
Msa0837410 | Msa1211340 | 0.826025 | 3.401857e-54 | -8.615850e-47 |
Msa0837410 | Msa1223330 | 0.804785 | 1.828079e-49 | -8.615850e-47 |
Msa0837410 | Msa1259640 | 0.830864 | 2.309967e-55 | -8.615850e-47 |
Msa0837410 | Msa1262960 | 0.828078 | 1.097881e-54 | -8.615850e-47 |
Msa0837410 | Msa1276660 | 0.826351 | 2.845191e-54 | -8.615850e-47 |
Msa0837410 | Msa1276970 | 0.805710 | 1.170572e-49 | -8.615850e-47 |
Msa0837410 | Msa1300450 | 0.829365 | 5.362100e-55 | -8.615850e-47 |
Msa0837410 | Msa1302060 | 0.852071 | 5.872431e-61 | -8.615850e-47 |
Msa0837410 | Msa1320820 | 0.822899 | 1.850500e-53 | -8.615850e-47 |
Msa0837410 | Msa1323690 | 0.806424 | 8.281992e-50 | -8.615850e-47 |
Msa0837410 | Msa1328640 | 0.802540 | 5.345438e-49 | -8.615850e-47 |
Msa0837410 | Msa1329050 | -0.820799 | 5.665618e-53 | -8.615850e-47 |
Msa0837410 | Msa1329450 | 0.829040 | 6.427919e-55 | -8.615850e-47 |
Msa0837410 | Msa1329790 | 0.841853 | 3.694371e-58 | -8.615850e-47 |
Msa0837410 | Msa1338830 | 0.822456 | 2.346586e-53 | -8.615850e-47 |
Msa0837410 | Msa1344310 | 0.811151 | 8.081534e-51 | -8.615850e-47 |
Msa0837410 | Msa1356610 | 0.806348 | 8.591427e-50 | -8.615850e-47 |
Msa0837410 | Msa1364430 | 0.807201 | 5.674239e-50 | -8.615850e-47 |
Msa0837410 | Msa1365760 | 0.830214 | 3.331428e-55 | -8.615850e-47 |
Msa0837410 | Msa1371520 | 0.870403 | 1.498162e-66 | -8.615850e-47 |
Msa0837410 | Msa1373820 | 0.838914 | 2.166231e-57 | -8.615850e-47 |
Msa0837410 | Msa1379590 | 0.805915 | 1.059900e-49 | -8.615850e-47 |
Msa0837410 | Msa1393820 | 0.813983 | 1.941425e-51 | -8.615850e-47 |
Msa0837410 | Msa1396780 | 0.806885 | 6.619214e-50 | -8.615850e-47 |
Msa0837410 | Msa1409950 | 0.826800 | 2.223900e-54 | -8.615850e-47 |
Msa0837410 | Msa1410420 | 0.828169 | 1.043695e-54 | -8.615850e-47 |
Msa0837410 | Msa1411950 | 0.822447 | 2.357680e-53 | -8.615850e-47 |
Msa0837410 | Msa1418240 | 0.826846 | 2.167933e-54 | -8.615850e-47 |
Msa0837410 | Msa1420250 | 0.850971 | 1.202320e-60 | -8.615850e-47 |
Msa0837410 | Msa1424640 | 0.804649 | 1.951610e-49 | -8.615850e-47 |
Msa0837410 | Msa1432920 | 0.805656 | 1.201476e-49 | -8.615850e-47 |
Msa0837410 | Msa1439610 | 0.828864 | 7.092455e-55 | -8.615850e-47 |
Msa0837410 | Msa1443930 | 0.802688 | 4.981152e-49 | -8.615850e-47 |
Msa0837410 | Msa1446780 | 0.814977 | 1.170351e-51 | -8.615850e-47 |
Msa0837410 | Msa1454530 | 0.830886 | 2.281181e-55 | -8.615850e-47 |
Msa0837410 | Msa1459460 | 0.813081 | 3.065139e-51 | -8.615850e-47 |
Msa0127850 | Msa0837410 | 0.808256 | 3.385762e-50 | -8.615850e-47 |
Msa0130110 | Msa0837410 | 0.819122 | 1.370880e-52 | -8.615850e-47 |
Msa0130240 | Msa0837410 | 0.805092 | 1.576917e-49 | -8.615850e-47 |
Msa0133720 | Msa0837410 | 0.825301 | 5.051143e-54 | -8.615850e-47 |
Msa0133820 | Msa0837410 | 0.839699 | 1.355640e-57 | -8.615850e-47 |
Msa0134000 | Msa0837410 | 0.803443 | 3.477919e-49 | -8.615850e-47 |
Msa0138360 | Msa0837410 | 0.873503 | 1.398503e-67 | -8.615850e-47 |
Msa0138750 | Msa0837410 | 0.813036 | 3.136127e-51 | -8.615850e-47 |
Msa0141400 | Msa0837410 | 0.830045 | 3.662834e-55 | -8.615850e-47 |
Msa0144360 | Msa0837410 | 0.849001 | 4.278001e-60 | -8.615850e-47 |
Msa0147980 | Msa0837410 | 0.864765 | 9.610709e-65 | -8.615850e-47 |
Msa0152400 | Msa0837410 | 0.814550 | 1.455187e-51 | -8.615850e-47 |
Msa0154440 | Msa0837410 | 0.817922 | 2.565233e-52 | -8.615850e-47 |
Msa0168870 | Msa0837410 | 0.822617 | 2.152591e-53 | -8.615850e-47 |
Msa0171850 | Msa0837410 | 0.821026 | 5.024365e-53 | -8.615850e-47 |
Msa0173890 | Msa0837410 | 0.804258 | 2.355279e-49 | -8.615850e-47 |
Msa0174000 | Msa0837410 | 0.815117 | 1.089650e-51 | -8.615850e-47 |
Msa0176050 | Msa0837410 | 0.812285 | 4.577421e-51 | -8.615850e-47 |
Msa0181000 | Msa0837410 | 0.821624 | 3.656500e-53 | -8.615850e-47 |
Msa0181230 | Msa0837410 | 0.844294 | 8.262733e-59 | -8.615850e-47 |
Msa0187030 | Msa0837410 | 0.842516 | 2.465166e-58 | -8.615850e-47 |
Msa0207350 | Msa0837410 | 0.822261 | 2.604211e-53 | -8.615850e-47 |
Msa0218350 | Msa0837410 | 0.806855 | 6.717330e-50 | -8.615850e-47 |
Msa0220730 | Msa0837410 | 0.806663 | 7.372960e-50 | -8.615850e-47 |
Msa0221480 | Msa0837410 | 0.815803 | 7.665721e-52 | -8.615850e-47 |
Msa0225480 | Msa0837410 | 0.801074 | 1.068978e-48 | -8.615850e-47 |
Msa0225670 | Msa0837410 | 0.808598 | 2.863109e-50 | -8.615850e-47 |
Msa0230150 | Msa0837410 | 0.844105 | 9.291787e-59 | -8.615850e-47 |
Msa0230370 | Msa0837410 | 0.825933 | 3.578061e-54 | -8.615850e-47 |
Msa0384670 | Msa0837410 | 0.831357 | 1.747202e-55 | -8.615850e-47 |
Msa0392200 | Msa0837410 | 0.841098 | 5.837904e-58 | -8.615850e-47 |
Msa0403660 | Msa0837410 | 0.847453 | 1.145258e-59 | -8.615850e-47 |
Msa0411410 | Msa0837410 | 0.845786 | 3.268422e-59 | -8.615850e-47 |
Msa0421300 | Msa0837410 | -0.807429 | 5.076788e-50 | -8.615850e-47 |
Msa0428050 | Msa0837410 | 0.801350 | 9.386008e-49 | -8.615850e-47 |
Msa0430640 | Msa0837410 | 0.804062 | 2.586550e-49 | -8.615850e-47 |
Msa0433610 | Msa0837410 | 0.802044 | 6.763104e-49 | -8.615850e-47 |
Msa0434570 | Msa0837410 | 0.853346 | 2.538813e-61 | -8.615850e-47 |
Msa0434770 | Msa0837410 | 0.847717 | 9.694211e-60 | -8.615850e-47 |
Msa0451070 | Msa0837410 | 0.800956 | 1.129976e-48 | -8.615850e-47 |
Msa0451360 | Msa0837410 | 0.830296 | 3.181526e-55 | -8.615850e-47 |
Msa0467100 | Msa0837410 | 0.809706 | 1.657035e-50 | -8.615850e-47 |
Msa0468250 | Msa0837410 | 0.806351 | 8.580931e-50 | -8.615850e-47 |
Msa0468800 | Msa0837410 | 0.838548 | 2.694237e-57 | -8.615850e-47 |
Msa0471420 | Msa0837410 | 0.820890 | 5.399950e-53 | -8.615850e-47 |
Msa0478580 | Msa0837410 | 0.832128 | 1.128046e-55 | -8.615850e-47 |
Msa0479200 | Msa0837410 | 0.851601 | 7.982106e-61 | -8.615850e-47 |
Msa0241830 | Msa0837410 | 0.810746 | 9.886544e-51 | -8.615850e-47 |
Msa0244380 | Msa0837410 | 0.825776 | 3.898829e-54 | -8.615850e-47 |
Msa0253290 | Msa0837410 | 0.807780 | 4.275455e-50 | -8.615850e-47 |
Msa0277420 | Msa0837410 | 0.825913 | 3.616979e-54 | -8.615850e-47 |
Msa0279850 | Msa0837410 | 0.839808 | 1.269327e-57 | -8.615850e-47 |
Msa0289950 | Msa0837410 | 0.822718 | 2.039485e-53 | -8.615850e-47 |
Msa0299880 | Msa0837410 | 0.800132 | 1.663450e-48 | -8.615850e-47 |
Msa0307570 | Msa0837410 | 0.894518 | 2.287307e-75 | -8.615850e-47 |
Msa0312530 | Msa0837410 | 0.805606 | 1.230713e-49 | -8.615850e-47 |
Msa0317270 | Msa0837410 | 0.813410 | 2.595845e-51 | -8.615850e-47 |
Msa0322900 | Msa0837410 | 0.850783 | 1.357926e-60 | -8.615850e-47 |
Msa0341690 | Msa0837410 | 0.826997 | 1.994897e-54 | -8.615850e-47 |
Msa0342010 | Msa0837410 | 0.825128 | 5.549101e-54 | -8.615850e-47 |
Msa0346990 | Msa0837410 | 0.823231 | 1.548196e-53 | -8.615850e-47 |
Msa0358400 | Msa0837410 | 0.815569 | 8.644709e-52 | -8.615850e-47 |
Msa0358890 | Msa0837410 | 0.811568 | 6.560330e-51 | -8.615850e-47 |
Msa0363060 | Msa0837410 | 0.810961 | 8.885960e-51 | -8.615850e-47 |
Msa0363400 | Msa0837410 | 0.810191 | 1.303112e-50 | -8.615850e-47 |
Msa0363810 | Msa0837410 | 0.831184 | 1.927868e-55 | -8.615850e-47 |
Msa0483740 | Msa0837410 | 0.806599 | 7.605864e-50 | -8.615850e-47 |
Msa0485240 | Msa0837410 | 0.819977 | 8.747369e-53 | -8.615850e-47 |
Msa0510290 | Msa0837410 | 0.808712 | 2.706158e-50 | -8.615850e-47 |
Msa0516120 | Msa0837410 | 0.819220 | 1.301903e-52 | -8.615850e-47 |
Msa0518030 | Msa0837410 | 0.857030 | 2.153854e-62 | -8.615850e-47 |
Msa0518960 | Msa0837410 | 0.829816 | 4.165846e-55 | -8.615850e-47 |
Msa0527190 | Msa0837410 | 0.857325 | 1.762820e-62 | -8.615850e-47 |
Msa0531250 | Msa0837410 | 0.816927 | 4.297263e-52 | -8.615850e-47 |
Msa0544660 | Msa0837410 | 0.816558 | 5.199406e-52 | -8.615850e-47 |
Msa0553200 | Msa0837410 | 0.808754 | 2.651368e-50 | -8.615850e-47 |
Msa0556010 | Msa0837410 | 0.857322 | 1.765845e-62 | -8.615850e-47 |
Msa0573380 | Msa0837410 | 0.816312 | 5.902309e-52 | -8.615850e-47 |
Msa0576680 | Msa0837410 | 0.820158 | 7.949933e-53 | -8.615850e-47 |
Msa0578090 | Msa0837410 | 0.803901 | 2.793749e-49 | -8.615850e-47 |
Msa0579660 | Msa0837410 | 0.814349 | 1.612232e-51 | -8.615850e-47 |
Msa0581690 | Msa0837410 | 0.899421 | 2.015365e-77 | -8.615850e-47 |
Msa0583500 | Msa0837410 | 0.817582 | 3.060976e-52 | -8.615850e-47 |
Msa0584550 | Msa0837410 | 0.823335 | 1.464391e-53 | -8.615850e-47 |
Msa0588090 | Msa0837410 | 0.803546 | 3.310623e-49 | -8.615850e-47 |
Msa0590640 | Msa0837410 | 0.804972 | 1.671254e-49 | -8.615850e-47 |
Msa0597770 | Msa0837410 | 0.817023 | 4.088994e-52 | -8.615850e-47 |
Msa0601950 | Msa0837410 | 0.813912 | 2.013082e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0837410 | MtrunA17_Chr5g0403851 | 99.415 | 171 | 1 | 0 | 1 | 171 | 1 | 171 | 1.32e-126 | 352 |
Msa0837410 | MtrunA17_Chr3g0141491 | 67.416 | 89 | 26 | 2 | 48 | 133 | 6 | 94 | 1.73e-34 | 118 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0837410 | AT4G36660.1 | 70.588 | 170 | 40 | 2 | 1 | 160 | 1 | 170 | 1.12e-78 | 232 |
Msa0837410 | AT5G65650.1 | 69.186 | 172 | 46 | 2 | 1 | 165 | 1 | 172 | 2.76e-76 | 226 |
Msa0837410 | AT1G19380.1 | 54.622 | 119 | 53 | 1 | 30 | 147 | 25 | 143 | 6.15e-37 | 125 |
Find 71 sgRNAs with CRISPR-Local
Find 255 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGAAAGGAAGGTACAAATTT+TGG | 0.094967 | 5_4:+11389543 | Msa0837410:CDS |
ATACATAATCATCTTGCTTA+TGG | 0.256319 | 5_4:-11393246 | None:intergenic |
TTCCTTTGTCAGCTTGCTTA+AGG | 0.283386 | 5_4:-11393095 | None:intergenic |
AACATGGATTCAGGTTTGTT+TGG | 0.284349 | 5_4:+11389521 | Msa0837410:CDS |
GGATCAGGTTGCCGAGGTTT+TGG | 0.290545 | 5_4:+11389869 | Msa0837410:CDS |
ACTTGTGCATTTAGCATAGT+TGG | 0.331228 | 5_4:-11393383 | None:intergenic |
ACATGGATTCAGGTTTGTTT+GGG | 0.340632 | 5_4:+11389522 | Msa0837410:CDS |
ACCGTTTCTCTTCGTTGGTC+TGG | 0.356252 | 5_4:+11389614 | Msa0837410:CDS |
GACGGCGGCGATTAACAAAA+AGG | 0.382742 | 5_4:+11389496 | Msa0837410:CDS |
AACTGACTATATGTTCTTGT+AGG | 0.392162 | 5_4:+11393355 | Msa0837410:three_prime_UTR |
CTGGTACCGTTTCTCTTCGT+TGG | 0.412184 | 5_4:+11389609 | Msa0837410:CDS |
AATGGAGGAGAGGGAGAAAG+TGG | 0.421490 | 5_4:+11389810 | Msa0837410:CDS |
CGATCTGATTGTGTAAATGA+AGG | 0.432492 | 5_4:-11389285 | None:intergenic |
TCAAGGGTCTGGCTTGTGCT+TGG | 0.446945 | 5_4:+11393159 | Msa0837410:three_prime_UTR |
ACATCGAGATCGTCGTGAAT+CGG | 0.453320 | 5_4:-11389671 | None:intergenic |
AGAAAGTGGTGAGGCATATG+TGG | 0.462069 | 5_4:+11389824 | Msa0837410:CDS |
AGTATCGAGGTCACTGGATA+AGG | 0.465982 | 5_4:-11389648 | None:intergenic |
CTCTATTATTATTATTGTTG+TGG | 0.469091 | 5_4:-11389343 | None:intergenic |
ATTATTGTAGATTATTAGAT+CGG | 0.476671 | 5_4:+11389442 | Msa0837410:five_prime_UTR |
AAGGAAAACTAACCGTGGAT+TGG | 0.488593 | 5_4:-11390014 | None:intergenic |
TGTTGTGGTAGATGAACAAC+GGG | 0.490230 | 5_4:-11389328 | None:intergenic |
CAGGTTTGTTTGGGAAAGGA+AGG | 0.501755 | 5_4:+11389531 | Msa0837410:CDS |
ACACCAACAGCCGTAGGATC+AGG | 0.511562 | 5_4:+11389854 | Msa0837410:CDS |
ATAAATCAATAACGCGGTGC+CGG | 0.513005 | 5_4:+11389242 | Msa0837410:five_prime_UTR |
TTAATCGCCGCCGTCGTCGT+TGG | 0.517902 | 5_4:-11389488 | None:intergenic |
TCTAGGAGCAGTCAAGGGTC+TGG | 0.518590 | 5_4:+11393148 | Msa0837410:three_prime_UTR |
GACCACTCTAGGAGCAGTCA+AGG | 0.524656 | 5_4:+11393142 | Msa0837410:three_prime_UTR |
GATTATTAGATCGGAAATGA+AGG | 0.534187 | 5_4:+11389451 | Msa0837410:exon |
GATTCAGGTTTGTTTGGGAA+AGG | 0.536575 | 5_4:+11389527 | Msa0837410:CDS |
CAACCTGATCCTACGGCTGT+TGG | 0.537984 | 5_4:-11389857 | None:intergenic |
GCGTGCTTAAAGACCACTCT+AGG | 0.544127 | 5_4:+11393131 | Msa0837410:exon |
CTTCATTTACACAATCAGAT+CGG | 0.547440 | 5_4:+11389286 | Msa0837410:five_prime_UTR |
CGGAAATGAAGGATGACGAT+GGG | 0.550371 | 5_4:+11389462 | Msa0837410:exon |
ACCAGACCAACGAAGAGAAA+CGG | 0.550644 | 5_4:-11389615 | None:intergenic |
GAAAGTGGTGAGGCATATGT+GGG | 0.551973 | 5_4:+11389825 | Msa0837410:CDS |
ACCCTTGACTGCTCCTAGAG+TGG | 0.554244 | 5_4:-11393144 | None:intergenic |
ACCGTGGATTGGATAGGAGG+TGG | 0.560306 | 5_4:-11390003 | None:intergenic |
CTAACCGTGGATTGGATAGG+AGG | 0.562418 | 5_4:-11390006 | None:intergenic |
AAACTAACCGTGGATTGGAT+AGG | 0.566662 | 5_4:-11390009 | None:intergenic |
AATCAATAACGCGGTGCCGG+TGG | 0.566971 | 5_4:+11389245 | Msa0837410:five_prime_UTR |
TGTGTAGGAAATGGAGGAGA+GGG | 0.567688 | 5_4:+11389801 | Msa0837410:intron |
AATCGGAGTATCGAGGTCAC+TGG | 0.567901 | 5_4:-11389654 | None:intergenic |
TTTGTGTGTGTAGGAAATGG+AGG | 0.573209 | 5_4:+11389795 | Msa0837410:intron |
ACCTCGGCAACCTGATCCTA+CGG | 0.573548 | 5_4:-11389864 | None:intergenic |
AGCCTTAAGCAAGCTGACAA+AGG | 0.595487 | 5_4:+11393093 | Msa0837410:CDS |
GAATTGACAAGTGATGTTCC+TGG | 0.596743 | 5_4:+11389919 | Msa0837410:CDS |
CATCATATTTCAGAGAGCAC+AGG | 0.597960 | 5_4:+11393059 | Msa0837410:intron |
GCTGTGATGCAAAATGAAGA+TGG | 0.601135 | 5_4:-11389199 | None:intergenic |
AGGAGAGGGAGAAAGTGGTG+AGG | 0.601765 | 5_4:+11389815 | Msa0837410:CDS |
TGGGCTTCCAACGACGACGG+CGG | 0.609391 | 5_4:+11389481 | Msa0837410:CDS |
TTGTTGTGGTAGATGAACAA+CGG | 0.611604 | 5_4:-11389329 | None:intergenic |
AGAAACGGTACCAGTAAACA+TGG | 0.615388 | 5_4:-11389600 | None:intergenic |
GCCGTAGGATCAGGTTGCCG+AGG | 0.615991 | 5_4:+11389863 | Msa0837410:CDS |
ATGTGAATGTGAGACACCAC+CGG | 0.617048 | 5_4:-11389261 | None:intergenic |
AAAGCCTCTTGCCAAAACCT+CGG | 0.619602 | 5_4:-11389880 | None:intergenic |
AAATGAAGATGGTGAAATGA+CGG | 0.622155 | 5_4:-11389188 | None:intergenic |
GTATAAATTGAATTTATGTG+TGG | 0.628850 | 5_4:+11393457 | Msa0837410:three_prime_UTR |
CGATGGGCTTCCAACGACGA+CGG | 0.632047 | 5_4:+11389478 | Msa0837410:CDS |
TCCACCTCCTATCCAATCCA+CGG | 0.641814 | 5_4:+11390002 | Msa0837410:CDS |
TCGGAAATGAAGGATGACGA+TGG | 0.646801 | 5_4:+11389461 | Msa0837410:exon |
ACCACTCTAGGAGCAGTCAA+GGG | 0.647727 | 5_4:+11393143 | Msa0837410:three_prime_UTR |
AAAAGATTGCGAAGAAACAG+TGG | 0.656108 | 5_4:+11393192 | Msa0837410:three_prime_UTR |
GTGTGTAGGAAATGGAGGAG+AGG | 0.656261 | 5_4:+11389800 | Msa0837410:intron |
GATTGCGAAGAAACAGTGGT+GGG | 0.658478 | 5_4:+11393196 | Msa0837410:three_prime_UTR |
AGATTGCGAAGAAACAGTGG+TGG | 0.662809 | 5_4:+11393195 | Msa0837410:three_prime_UTR |
AATTTGTACGACAACAAACG+TGG | 0.674259 | 5_4:-11393331 | None:intergenic |
CGTCGTGAATCGGAGTATCG+AGG | 0.677291 | 5_4:-11389661 | None:intergenic |
ATAGCATCATCTCTAACACC+AGG | 0.678366 | 5_4:-11389937 | None:intergenic |
ATGTGTACACCAACAGCCGT+AGG | 0.683663 | 5_4:+11389848 | Msa0837410:CDS |
CTGATAATAAATCAATAACG+CGG | 0.702407 | 5_4:+11389236 | Msa0837410:five_prime_UTR |
ACAAAGGAAAAGAAGCGATG+CGG | 0.741207 | 5_4:+11393109 | Msa0837410:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTATTTTTATTTTTAATAAA+GGG | - | chr5_4:11392225-11392244 | None:intergenic | 0.0% |
!!! | TTTATTTTTATTTTTAATAA+AGG | - | chr5_4:11392226-11392245 | None:intergenic | 0.0% |
!!! | ATTATATTTTAATTATTATT+TGG | + | chr5_4:11393413-11393432 | Msa0837410:three_prime_UTR | 0.0% |
!! | TAAATATTTAAGTAATATCT+TGG | - | chr5_4:11389760-11389779 | None:intergenic | 10.0% |
!! | ATAAATCTTTATATGTTTAT+AGG | - | chr5_4:11390663-11390682 | None:intergenic | 10.0% |
!! | ATTATTGTAGATTATTAGAT+CGG | + | chr5_4:11389442-11389461 | Msa0837410:five_prime_UTR | 15.0% |
!! | TTAAATATGAATGAGATTAA+AGG | - | chr5_4:11389715-11389734 | None:intergenic | 15.0% |
!!! | TTTACAATTTGTATGTTTTT+TGG | + | chr5_4:11391017-11391036 | Msa0837410:intron | 15.0% |
!!! | AGATGATTATGTATTTTAAT+AGG | + | chr5_4:11393255-11393274 | Msa0837410:three_prime_UTR | 15.0% |
!!! | TTGGTAAACAAATATTTTAT+TGG | + | chr5_4:11393432-11393451 | Msa0837410:three_prime_UTR | 15.0% |
!!! | TGGTAAACAAATATTTTATT+GGG | + | chr5_4:11393433-11393452 | Msa0837410:three_prime_UTR | 15.0% |
!! | CTCTATTATTATTATTGTTG+TGG | - | chr5_4:11389346-11389365 | None:intergenic | 20.0% |
!!! | ACTCATTGTTAATTTGTTAT+TGG | + | chr5_4:11390107-11390126 | Msa0837410:intron | 20.0% |
!! | ATAATATTGCACAAGAAATT+TGG | + | chr5_4:11390161-11390180 | Msa0837410:intron | 20.0% |
!! | GAACAAAAGATAAATTAAAG+TGG | - | chr5_4:11390394-11390413 | None:intergenic | 20.0% |
!!! | TTTTTAAATGTTGTTTCGTT+TGG | + | chr5_4:11390623-11390642 | Msa0837410:intron | 20.0% |
!! | TATATGTTTATAGGTGTTTA+TGG | - | chr5_4:11390654-11390673 | None:intergenic | 20.0% |
!! | TGTAAGTAAATAGACAAAAA+AGG | - | chr5_4:11391299-11391318 | None:intergenic | 20.0% |
!! | GATATTGTTAGTTAGATAAA+AGG | + | chr5_4:11391508-11391527 | Msa0837410:intron | 20.0% |
!!! | TTCATATTTGATAGTTTAAC+TGG | + | chr5_4:11391547-11391566 | Msa0837410:intron | 20.0% |
!!! | TGTTTATGTCAATGATTTTA+AGG | + | chr5_4:11392156-11392175 | Msa0837410:intron | 20.0% |
!!! | GTTTATGTCAATGATTTTAA+GGG | + | chr5_4:11392157-11392176 | Msa0837410:intron | 20.0% |
!!! | TGTTTAGTTTTGTTTTCTAA+GGG | - | chr5_4:11392466-11392485 | None:intergenic | 20.0% |
!!! | ATGTTTAGTTTTGTTTTCTA+AGG | - | chr5_4:11392467-11392486 | None:intergenic | 20.0% |
!! | TAAAATGAATGTTTGAATAG+AGG | - | chr5_4:11392526-11392545 | None:intergenic | 20.0% |
!!! | ATCATTTTGGAAACATTTTA+AGG | + | chr5_4:11392605-11392624 | Msa0837410:intron | 20.0% |
!!! | TCATTTTGGAAACATTTTAA+GGG | + | chr5_4:11392606-11392625 | Msa0837410:intron | 20.0% |
!! | TAATCTAAATTAACTGAGAA+TGG | - | chr5_4:11392751-11392770 | None:intergenic | 20.0% |
!! | TCATACTAGAGTATATATTA+TGG | + | chr5_4:11393020-11393039 | Msa0837410:intron | 20.0% |
!!! | TTATGTATTTTAATAGGTTG+TGG | + | chr5_4:11393261-11393280 | Msa0837410:three_prime_UTR | 20.0% |
!! | GTATAAATTGAATTTATGTG+TGG | + | chr5_4:11393457-11393476 | Msa0837410:three_prime_UTR | 20.0% |
! | CTGATAATAAATCAATAACG+CGG | + | chr5_4:11389236-11389255 | Msa0837410:five_prime_UTR | 25.0% |
! | GATTAACAAAAAGGAAAACA+TGG | + | chr5_4:11389505-11389524 | Msa0837410:CDS | 25.0% |
! | TGAATGAGATTAAAGGAAAA+TGG | - | chr5_4:11389708-11389727 | None:intergenic | 25.0% |
!! | TTCATCATTTCAAGTAAGTA+TGG | - | chr5_4:11390080-11390099 | None:intergenic | 25.0% |
!!! | TTGTTAATTTGTTATTGGTC+TGG | + | chr5_4:11390112-11390131 | Msa0837410:intron | 25.0% |
!!! | TTTTTTGTCAAGTCTTTTTG+TGG | - | chr5_4:11390510-11390529 | None:intergenic | 25.0% |
! | CAGACTAATTTCAACTAATA+CGG | - | chr5_4:11390594-11390613 | None:intergenic | 25.0% |
!!! | GATTGGTTTTATTTTGAATG+TGG | + | chr5_4:11390765-11390784 | Msa0837410:intron | 25.0% |
! | TATGTTTGCAATTTGCAAAT+GGG | + | chr5_4:11390810-11390829 | Msa0837410:intron | 25.0% |
!! | CATTATTTAAAGCATTTCCT+GGG | + | chr5_4:11390862-11390881 | Msa0837410:intron | 25.0% |
!!! | TCTTTGTTGTTTGCATAATA+CGG | + | chr5_4:11391062-11391081 | Msa0837410:intron | 25.0% |
!! | ATTCAACTTTAAAAGTGATG+TGG | - | chr5_4:11391239-11391258 | None:intergenic | 25.0% |
!!! | CATCACTTTTAAAGTTGAAT+TGG | + | chr5_4:11391239-11391258 | Msa0837410:intron | 25.0% |
! | AAAAGTTTATAAGTGTGTGT+AGG | - | chr5_4:11391275-11391294 | None:intergenic | 25.0% |
! | CAATTACATGGTAGAAATAA+TGG | + | chr5_4:11391373-11391392 | Msa0837410:intron | 25.0% |
!! | TCCAATTTGCATAAACTTTT+AGG | + | chr5_4:11391418-11391437 | Msa0837410:intron | 25.0% |
! | TCCTAAAAGTTTATGCAAAT+TGG | - | chr5_4:11391422-11391441 | None:intergenic | 25.0% |
! | TTAAGTGAACAAGAATTAGA+AGG | + | chr5_4:11391670-11391689 | Msa0837410:intron | 25.0% |
!! | CTTAAAAGTATAGTTAGAGA+GGG | - | chr5_4:11391735-11391754 | None:intergenic | 25.0% |
!!! | TAAAAGTTGAGCCTTTTTTA+GGG | - | chr5_4:11392039-11392058 | None:intergenic | 25.0% |
!! | AAAAACTCAATTTTAGATGG+AGG | - | chr5_4:11392105-11392124 | None:intergenic | 25.0% |
!! | CACAAAAACTCAATTTTAGA+TGG | - | chr5_4:11392108-11392127 | None:intergenic | 25.0% |
!!! | AATGATTTTAAGGGACAATA+TGG | + | chr5_4:11392166-11392185 | Msa0837410:intron | 25.0% |
! | AAGTTTAGAAACTATTCTCA+AGG | - | chr5_4:11392359-11392378 | None:intergenic | 25.0% |
! | TTGAGAATAGTTTCTAAACT+TGG | + | chr5_4:11392358-11392377 | Msa0837410:intron | 25.0% |
!! | TAAACTTGGCATTTTTGTAT+TGG | + | chr5_4:11392372-11392391 | Msa0837410:intron | 25.0% |
! | AGTCTTCAAGAAAAATAAAC+TGG | + | chr5_4:11392489-11392508 | Msa0837410:intron | 25.0% |
! | GTCTTCAAGAAAAATAAACT+GGG | + | chr5_4:11392490-11392509 | Msa0837410:intron | 25.0% |
! | AAAGTAGAAAGAGATGTTAT+TGG | + | chr5_4:11392640-11392659 | Msa0837410:intron | 25.0% |
! | GAAAGACTAATTAAAACAAC+AGG | - | chr5_4:11392719-11392738 | None:intergenic | 25.0% |
!!! | GCAATAGTAGTTTTAAATGT+AGG | + | chr5_4:11392817-11392836 | Msa0837410:intron | 25.0% |
! | TTCTAAGCTCAATTATTTGA+AGG | + | chr5_4:11392886-11392905 | Msa0837410:intron | 25.0% |
! | TCTAAGCTCAATTATTTGAA+GGG | + | chr5_4:11392887-11392906 | Msa0837410:intron | 25.0% |
! | CTTATGTGAAAAAAATGAGT+TGG | + | chr5_4:11392932-11392951 | Msa0837410:intron | 25.0% |
! | ATACATAATCATCTTGCTTA+TGG | - | chr5_4:11393249-11393268 | None:intergenic | 25.0% |
AAATGAAGATGGTGAAATGA+CGG | - | chr5_4:11389191-11389210 | None:intergenic | 30.0% | |
CTTCATTTACACAATCAGAT+CGG | + | chr5_4:11389286-11389305 | Msa0837410:five_prime_UTR | 30.0% | |
GATTATTAGATCGGAAATGA+AGG | + | chr5_4:11389451-11389470 | Msa0837410:exon | 30.0% | |
AAAAAGGAAAACATGGATTC+AGG | + | chr5_4:11389512-11389531 | Msa0837410:CDS | 30.0% | |
!! | GAAAGGAAGGTACAAATTTT+GGG | + | chr5_4:11389544-11389563 | Msa0837410:CDS | 30.0% |
! | TAGATGTAATTTGTGTGTGT+AGG | + | chr5_4:11389786-11389805 | Msa0837410:intron | 30.0% |
! | TAATTTGTGTGTGTAGGAAA+TGG | + | chr5_4:11389792-11389811 | Msa0837410:intron | 30.0% |
ATATTGCTGATCAAACTCAA+TGG | + | chr5_4:11390231-11390250 | Msa0837410:intron | 30.0% | |
AAGACTTAATTGAACGCTTA+TGG | - | chr5_4:11390462-11390481 | None:intergenic | 30.0% | |
GGAGAAATTTAACTCATGTT+TGG | - | chr5_4:11390489-11390508 | None:intergenic | 30.0% | |
CTATGTTTGCAATTTGCAAA+TGG | + | chr5_4:11390809-11390828 | Msa0837410:intron | 30.0% | |
ATGTTTGCAATTTGCAAATG+GGG | + | chr5_4:11390811-11390830 | Msa0837410:intron | 30.0% | |
! | GCATTATTTAAAGCATTTCC+TGG | + | chr5_4:11390861-11390880 | Msa0837410:intron | 30.0% |
AATTGTAAACCAACGAATCT+CGG | - | chr5_4:11391006-11391025 | None:intergenic | 30.0% | |
TGAAATCAGTTTCCATTACA+AGG | + | chr5_4:11391096-11391115 | Msa0837410:intron | 30.0% | |
!!! | GAGATCTTGTTTTCTTTGAA+AGG | + | chr5_4:11391196-11391215 | Msa0837410:intron | 30.0% |
TGTCTATTTACTTACACTGT+TGG | + | chr5_4:11391303-11391322 | Msa0837410:intron | 30.0% | |
!! | TGCATAAACTTTTAGGAAGA+TGG | + | chr5_4:11391425-11391444 | Msa0837410:intron | 30.0% |
ATATGAAGAACATTGCAACA+GGG | - | chr5_4:11391534-11391553 | None:intergenic | 30.0% | |
AATATGAAGAACATTGCAAC+AGG | - | chr5_4:11391535-11391554 | None:intergenic | 30.0% | |
TCTTCTTTCCTTGAATCTTT+GGG | - | chr5_4:11391595-11391614 | None:intergenic | 30.0% | |
TTCTTCTTTCCTTGAATCTT+TGG | - | chr5_4:11391596-11391615 | None:intergenic | 30.0% | |
TAGCATCTTGGATCAATTAA+AGG | - | chr5_4:11391635-11391654 | None:intergenic | 30.0% | |
TTAATTGATCCAAGATGCTA+AGG | + | chr5_4:11391635-11391654 | Msa0837410:intron | 30.0% | |
GAATTTCCTGTACTAAATAG+AGG | - | chr5_4:11391699-11391718 | None:intergenic | 30.0% | |
! | CCTTAAAAGTATAGTTAGAG+AGG | - | chr5_4:11391736-11391755 | None:intergenic | 30.0% |
! | CCTCTCTAACTATACTTTTA+AGG | + | chr5_4:11391733-11391752 | Msa0837410:intron | 30.0% |
TAATTGGTGAAGATCCATTA+TGG | + | chr5_4:11391979-11391998 | Msa0837410:intron | 30.0% | |
! | AGAAAATACAGGTTCTAGTT+TGG | + | chr5_4:11392012-11392031 | Msa0837410:intron | 30.0% |
!!! | CTAAAAGTTGAGCCTTTTTT+AGG | - | chr5_4:11392040-11392059 | None:intergenic | 30.0% |
GATGCAATCTAGGAATTTAA+AGG | - | chr5_4:11392258-11392277 | None:intergenic | 30.0% | |
! | TTGAATTTAAGACTGAGCTA+AGG | - | chr5_4:11392994-11393013 | None:intergenic | 30.0% |
TATGATGCAGTAAATACATC+AGG | - | chr5_4:11393046-11393065 | None:intergenic | 30.0% | |
AACTGACTATATGTTCTTGT+AGG | + | chr5_4:11393355-11393374 | Msa0837410:three_prime_UTR | 30.0% | |
CGATCTGATTGTGTAAATGA+AGG | - | chr5_4:11389288-11389307 | None:intergenic | 35.0% | |
TTGTTGTGGTAGATGAACAA+CGG | - | chr5_4:11389332-11389351 | None:intergenic | 35.0% | |
! | AACATGGATTCAGGTTTGTT+TGG | + | chr5_4:11389521-11389540 | Msa0837410:CDS | 35.0% |
! | ACATGGATTCAGGTTTGTTT+GGG | + | chr5_4:11389522-11389541 | Msa0837410:CDS | 35.0% |
!! | GGAAAGGAAGGTACAAATTT+TGG | + | chr5_4:11389543-11389562 | Msa0837410:CDS | 35.0% |
! | AGTTTTCCTTTCTCAATCCA+TGG | + | chr5_4:11390027-11390046 | Msa0837410:intron | 35.0% |
CAAGTAGTTAGTTATGTCAG+TGG | - | chr5_4:11390287-11390306 | None:intergenic | 35.0% | |
AAAACCAATCAACAAGACTC+AGG | - | chr5_4:11390755-11390774 | None:intergenic | 35.0% | |
AATTTGCAAATGGGGTTGTT+TGG | + | chr5_4:11390819-11390838 | Msa0837410:intron | 35.0% | |
! | TTTTCCTACATAAGTCTCAC+AGG | - | chr5_4:11390942-11390961 | None:intergenic | 35.0% |
ATTGTAAACCAACGAATCTC+GGG | - | chr5_4:11391005-11391024 | None:intergenic | 35.0% | |
ATAGTTTAACTGGAAGTTCC+TGG | + | chr5_4:11391557-11391576 | Msa0837410:intron | 35.0% | |
TACAATCACCCAAAGATTCA+AGG | + | chr5_4:11391584-11391603 | Msa0837410:intron | 35.0% | |
GATCAATTAAAGGACACTCT+GGG | - | chr5_4:11391625-11391644 | None:intergenic | 35.0% | |
CAATTATGACCTTAGCATCT+TGG | - | chr5_4:11391647-11391666 | None:intergenic | 35.0% | |
AGGTTTCCTCTATTTAGTAC+AGG | + | chr5_4:11391690-11391709 | Msa0837410:intron | 35.0% | |
CTTCGTCTTGGATCAATTAA+AGG | - | chr5_4:11391765-11391784 | None:intergenic | 35.0% | |
CAAACTTGTGACGAATTAGA+TGG | + | chr5_4:11391800-11391819 | Msa0837410:intron | 35.0% | |
GTCATGTCAAGTCATAAGTA+TGG | + | chr5_4:11391835-11391854 | Msa0837410:intron | 35.0% | |
!! | CCACACTATTTCTGCATTAT+CGG | - | chr5_4:11391933-11391952 | None:intergenic | 35.0% |
AATGCAGAAATAGTGTGGTT+AGG | + | chr5_4:11391935-11391954 | Msa0837410:intron | 35.0% | |
! | TCTAGTTTGGTCCCTAAAAA+AGG | + | chr5_4:11392025-11392044 | Msa0837410:intron | 35.0% |
! | CTCAATTTTAGATGGAGGTT+GGG | - | chr5_4:11392100-11392119 | None:intergenic | 35.0% |
! | ACTCAATTTTAGATGGAGGT+TGG | - | chr5_4:11392101-11392120 | None:intergenic | 35.0% |
AATGTTTGAATAGAGGACTC+AGG | - | chr5_4:11392519-11392538 | None:intergenic | 35.0% | |
TTTCCAAAATGATGACACAG+TGG | - | chr5_4:11392598-11392617 | None:intergenic | 35.0% | |
AGATAATCACTTGACTCTCA+AGG | + | chr5_4:11392773-11392792 | Msa0837410:intron | 35.0% | |
GATAATCACTTGACTCTCAA+GGG | + | chr5_4:11392774-11392793 | Msa0837410:intron | 35.0% | |
AAAAGATTGCGAAGAAACAG+TGG | + | chr5_4:11393192-11393211 | Msa0837410:three_prime_UTR | 35.0% | |
GAAGCATGAAAAACTGAGTA+GGG | - | chr5_4:11393227-11393246 | None:intergenic | 35.0% | |
AATTTGTACGACAACAAACG+TGG | - | chr5_4:11393334-11393353 | None:intergenic | 35.0% | |
ACTTGTGCATTTAGCATAGT+TGG | - | chr5_4:11393386-11393405 | None:intergenic | 35.0% | |
GCTGTGATGCAAAATGAAGA+TGG | - | chr5_4:11389202-11389221 | None:intergenic | 40.0% | |
ATAAATCAATAACGCGGTGC+CGG | + | chr5_4:11389242-11389261 | Msa0837410:five_prime_UTR | 40.0% | |
TGTTGTGGTAGATGAACAAC+GGG | - | chr5_4:11389331-11389350 | None:intergenic | 40.0% | |
! | GATTCAGGTTTGTTTGGGAA+AGG | + | chr5_4:11389527-11389546 | Msa0837410:CDS | 40.0% |
!! | CGATTTTGCTTCTCGCTTTT+TGG | + | chr5_4:11389576-11389595 | Msa0837410:CDS | 40.0% |
!! | GCTTTTTGGTCCATGTTTAC+TGG | + | chr5_4:11389590-11389609 | Msa0837410:CDS | 40.0% |
AGAAACGGTACCAGTAAACA+TGG | - | chr5_4:11389603-11389622 | None:intergenic | 40.0% | |
TTTGTGTGTGTAGGAAATGG+AGG | + | chr5_4:11389795-11389814 | Msa0837410:intron | 40.0% | |
GAATTGACAAGTGATGTTCC+TGG | + | chr5_4:11389919-11389938 | Msa0837410:CDS | 40.0% | |
ATAGCATCATCTCTAACACC+AGG | - | chr5_4:11389940-11389959 | None:intergenic | 40.0% | |
!! | AAACTAACCGTGGATTGGAT+AGG | - | chr5_4:11390012-11390031 | None:intergenic | 40.0% |
AAGGAAAACTAACCGTGGAT+TGG | - | chr5_4:11390017-11390036 | None:intergenic | 40.0% | |
TGAGAAAGGAAAACTAACCG+TGG | - | chr5_4:11390022-11390041 | None:intergenic | 40.0% | |
AACATTAACTAACTGCGCCA+TGG | - | chr5_4:11390047-11390066 | None:intergenic | 40.0% | |
TCAAACTCAATGGTCCTGTT+TGG | + | chr5_4:11390241-11390260 | Msa0837410:intron | 40.0% | |
TCAATGGTCCTGTTTGGATT+GGG | + | chr5_4:11390247-11390266 | Msa0837410:intron | 40.0% | |
TCGTATAACCCAATCCAAAC+AGG | - | chr5_4:11390258-11390277 | None:intergenic | 40.0% | |
GAGTTGTCAACACCTTGTAA+TGG | - | chr5_4:11391111-11391130 | None:intergenic | 40.0% | |
GTGATGTGGATGCATAAAGA+GGG | - | chr5_4:11391225-11391244 | None:intergenic | 40.0% | |
AGTGATGTGGATGCATAAAG+AGG | - | chr5_4:11391226-11391245 | None:intergenic | 40.0% | |
GTGTCATCACGAGTTAGTAA+AGG | - | chr5_4:11391349-11391368 | None:intergenic | 40.0% | |
GATGACACGACTCAATTACA+TGG | + | chr5_4:11391361-11391380 | Msa0837410:intron | 40.0% | |
GGATCAATTAAAGGACACTC+TGG | - | chr5_4:11391626-11391645 | None:intergenic | 40.0% | |
! | ATGAACTGTTAGCTTCGTCT+TGG | - | chr5_4:11391777-11391796 | None:intergenic | 40.0% |
CCGATAATGCAGAAATAGTG+TGG | + | chr5_4:11391930-11391949 | Msa0837410:intron | 40.0% | |
AAGATCCATTATGGTCACTG+AGG | + | chr5_4:11391988-11392007 | Msa0837410:intron | 40.0% | |
TTCTTCCTCAGTGACCATAA+TGG | - | chr5_4:11391996-11392015 | None:intergenic | 40.0% | |
GTCACTGAGGAAGAAAATAC+AGG | + | chr5_4:11392001-11392020 | Msa0837410:intron | 40.0% | |
GTCCTCGCAACAAATAAACT+AGG | + | chr5_4:11392059-11392078 | Msa0837410:intron | 40.0% | |
! | GTCCTAGTTTATTTGTTGCG+AGG | - | chr5_4:11392064-11392083 | None:intergenic | 40.0% |
TCAGTCTGTAGTCATTGTCA+GGG | - | chr5_4:11392193-11392212 | None:intergenic | 40.0% | |
TCAGGAAGAAGATGCAATCT+AGG | - | chr5_4:11392268-11392287 | None:intergenic | 40.0% | |
CTATTCTCAAGGACCAGAAT+AGG | - | chr5_4:11392348-11392367 | None:intergenic | 40.0% | |
TGCTCCTTGAGAAAAAAACC+TGG | + | chr5_4:11392427-11392446 | Msa0837410:intron | 40.0% | |
GCTCCTTGAGAAAAAAACCT+GGG | + | chr5_4:11392428-11392447 | Msa0837410:intron | 40.0% | |
!!! | GTTCCCAGGTTTTTTTCTCA+AGG | - | chr5_4:11392434-11392453 | None:intergenic | 40.0% |
AAAAAACCTGGGAACCAGTT+TGG | + | chr5_4:11392439-11392458 | Msa0837410:intron | 40.0% | |
!! | TGTTTTCTAAGGGACCAAAC+TGG | - | chr5_4:11392456-11392475 | None:intergenic | 40.0% |
! | TGTCCACTGTGTCATCATTT+TGG | + | chr5_4:11392592-11392611 | Msa0837410:intron | 40.0% |
ACAGGAATGCAAATGTGAAG+AGG | - | chr5_4:11392701-11392720 | None:intergenic | 40.0% | |
GGAATTTAGCGAAAGTAGAG+AGG | + | chr5_4:11392795-11392814 | Msa0837410:intron | 40.0% | |
! | CATCATATTTCAGAGAGCAC+AGG | + | chr5_4:11393059-11393078 | Msa0837410:intron | 40.0% |
! | TTCCTTTGTCAGCTTGCTTA+AGG | - | chr5_4:11393098-11393117 | None:intergenic | 40.0% |
ACAAAGGAAAAGAAGCGATG+CGG | + | chr5_4:11393109-11393128 | Msa0837410:CDS | 40.0% | |
! | GGAAGCATGAAAAACTGAGT+AGG | - | chr5_4:11393228-11393247 | None:intergenic | 40.0% |
ATGTGAATGTGAGACACCAC+CGG | - | chr5_4:11389264-11389283 | None:intergenic | 45.0% | |
TCGGAAATGAAGGATGACGA+TGG | + | chr5_4:11389461-11389480 | Msa0837410:exon | 45.0% | |
CGGAAATGAAGGATGACGAT+GGG | + | chr5_4:11389462-11389481 | Msa0837410:exon | 45.0% | |
! | CAGGTTTGTTTGGGAAAGGA+AGG | + | chr5_4:11389531-11389550 | Msa0837410:CDS | 45.0% |
ACCAGACCAACGAAGAGAAA+CGG | - | chr5_4:11389618-11389637 | None:intergenic | 45.0% | |
! | AGTATCGAGGTCACTGGATA+AGG | - | chr5_4:11389651-11389670 | None:intergenic | 45.0% |
ACATCGAGATCGTCGTGAAT+CGG | - | chr5_4:11389674-11389693 | None:intergenic | 45.0% | |
TGTGTAGGAAATGGAGGAGA+GGG | + | chr5_4:11389801-11389820 | Msa0837410:intron | 45.0% | |
AGAAAGTGGTGAGGCATATG+TGG | + | chr5_4:11389824-11389843 | Msa0837410:CDS | 45.0% | |
GAAAGTGGTGAGGCATATGT+GGG | + | chr5_4:11389825-11389844 | Msa0837410:CDS | 45.0% | |
AAAGCCTCTTGCCAAAACCT+CGG | - | chr5_4:11389883-11389902 | None:intergenic | 45.0% | |
!! | GTTTTGGCAAGAGGCTTTTG+AGG | + | chr5_4:11389885-11389904 | Msa0837410:CDS | 45.0% |
CTCAATGGTCCTGTTTGGAT+TGG | + | chr5_4:11390246-11390265 | Msa0837410:intron | 45.0% | |
CCAATCAACAAGACTCAGGT+TGG | - | chr5_4:11390751-11390770 | None:intergenic | 45.0% | |
!! | CCAACCTGAGTCTTGTTGAT+TGG | + | chr5_4:11390748-11390767 | Msa0837410:intron | 45.0% |
TGCAAATGGGGTTGTTTGGT+TGG | + | chr5_4:11390823-11390842 | Msa0837410:intron | 45.0% | |
GCAAATGGGGTTGTTTGGTT+GGG | + | chr5_4:11390824-11390843 | Msa0837410:intron | 45.0% | |
CAAATGGGGTTGTTTGGTTG+GGG | + | chr5_4:11390825-11390844 | Msa0837410:intron | 45.0% | |
CATCATGAGACTTCTTACCC+AGG | - | chr5_4:11390882-11390901 | None:intergenic | 45.0% | |
TTCGCCTGTGAGACTTATGT+AGG | + | chr5_4:11390935-11390954 | Msa0837410:intron | 45.0% | |
GTTTAACTGGAAGTTCCTGG+TGG | + | chr5_4:11391560-11391579 | Msa0837410:intron | 45.0% | |
ATGAAGCAAAGCTGTCTGTC+TGG | + | chr5_4:11391895-11391914 | Msa0837410:intron | 45.0% | |
TTTAGATGGAGGTTGGGAGA+GGG | - | chr5_4:11392094-11392113 | None:intergenic | 45.0% | |
! | TTTTAGATGGAGGTTGGGAG+AGG | - | chr5_4:11392095-11392114 | None:intergenic | 45.0% |
GTCAGTCTGTAGTCATTGTC+AGG | - | chr5_4:11392194-11392213 | None:intergenic | 45.0% | |
ATAACGTCCAGGACGAAGAA+AGG | - | chr5_4:11392295-11392314 | None:intergenic | 45.0% | |
TTCGTCCTGGACGTTATTGA+AGG | + | chr5_4:11392298-11392317 | Msa0837410:intron | 45.0% | |
AAGGTCCTTCAATAACGTCC+AGG | - | chr5_4:11392306-11392325 | None:intergenic | 45.0% | |
TGGACGTTATTGAAGGACCT+TGG | + | chr5_4:11392305-11392324 | Msa0837410:intron | 45.0% | |
ATTGAAGGACCTTGGAGAAC+TGG | + | chr5_4:11392313-11392332 | Msa0837410:intron | 45.0% | |
TCTTGAACACCAGTTCTCCA+AGG | - | chr5_4:11392325-11392344 | None:intergenic | 45.0% | |
CTGGTGTTCAAGACCTATTC+TGG | + | chr5_4:11392332-11392351 | Msa0837410:intron | 45.0% | |
AATGTGAAGAGGCTCAGATG+CGG | - | chr5_4:11392690-11392709 | None:intergenic | 45.0% | |
GGCTTCTTCGCATATGTTAC+TGG | - | chr5_4:11392973-11392992 | None:intergenic | 45.0% | |
AGCCTTAAGCAAGCTGACAA+AGG | + | chr5_4:11393093-11393112 | Msa0837410:CDS | 45.0% | |
AGATTGCGAAGAAACAGTGG+TGG | + | chr5_4:11393195-11393214 | Msa0837410:three_prime_UTR | 45.0% | |
GATTGCGAAGAAACAGTGGT+GGG | + | chr5_4:11393196-11393215 | Msa0837410:three_prime_UTR | 45.0% | |
!! | TTTAAAAGTTAAATAATAAT+TGG | + | chr5_4:11391963-11391982 | Msa0837410:intron | 5.0% |
GACGGCGGCGATTAACAAAA+AGG | + | chr5_4:11389496-11389515 | Msa0837410:CDS | 50.0% | |
CTGGTACCGTTTCTCTTCGT+TGG | + | chr5_4:11389609-11389628 | Msa0837410:CDS | 50.0% | |
ACCGTTTCTCTTCGTTGGTC+TGG | + | chr5_4:11389614-11389633 | Msa0837410:CDS | 50.0% | |
!! | AATCGGAGTATCGAGGTCAC+TGG | - | chr5_4:11389657-11389676 | None:intergenic | 50.0% |
GTGTGTAGGAAATGGAGGAG+AGG | + | chr5_4:11389800-11389819 | Msa0837410:intron | 50.0% | |
AATGGAGGAGAGGGAGAAAG+TGG | + | chr5_4:11389810-11389829 | Msa0837410:CDS | 50.0% | |
ATGTGTACACCAACAGCCGT+AGG | + | chr5_4:11389848-11389867 | Msa0837410:CDS | 50.0% | |
TCCACCTCCTATCCAATCCA+CGG | + | chr5_4:11390002-11390021 | Msa0837410:CDS | 50.0% | |
!! | CTAACCGTGGATTGGATAGG+AGG | - | chr5_4:11390009-11390028 | None:intergenic | 50.0% |
! | ACTGCGCCATGGATTGAGAA+AGG | - | chr5_4:11390036-11390055 | None:intergenic | 50.0% |
TCATGCTTCCCGAGATTCGT+TGG | + | chr5_4:11390994-11391013 | Msa0837410:intron | 50.0% | |
TTTGGGTGATTGTAGCCACC+AGG | - | chr5_4:11391578-11391597 | None:intergenic | 50.0% | |
!! | AGGACGAAGAAAGGCGTTTC+AGG | - | chr5_4:11392286-11392305 | None:intergenic | 50.0% |
TGAAACGCCTTTCTTCGTCC+TGG | + | chr5_4:11392285-11392304 | Msa0837410:intron | 50.0% | |
GCGTGCTTAAAGACCACTCT+AGG | + | chr5_4:11393131-11393150 | Msa0837410:exon | 50.0% | |
! | ACCACTCTAGGAGCAGTCAA+GGG | + | chr5_4:11393143-11393162 | Msa0837410:three_prime_UTR | 50.0% |
! | AATCAATAACGCGGTGCCGG+TGG | + | chr5_4:11389245-11389264 | Msa0837410:five_prime_UTR | 55.0% |
!! | CGTCGTGAATCGGAGTATCG+AGG | - | chr5_4:11389664-11389683 | None:intergenic | 55.0% |
AGGAGAGGGAGAAAGTGGTG+AGG | + | chr5_4:11389815-11389834 | Msa0837410:CDS | 55.0% | |
ACACCAACAGCCGTAGGATC+AGG | + | chr5_4:11389854-11389873 | Msa0837410:CDS | 55.0% | |
CAACCTGATCCTACGGCTGT+TGG | - | chr5_4:11389860-11389879 | None:intergenic | 55.0% | |
ACCTCGGCAACCTGATCCTA+CGG | - | chr5_4:11389867-11389886 | None:intergenic | 55.0% | |
!! | GGATCAGGTTGCCGAGGTTT+TGG | + | chr5_4:11389869-11389888 | Msa0837410:CDS | 55.0% |
!! | GTTGCCGAGGTTTTGGCAAG+AGG | + | chr5_4:11389876-11389895 | Msa0837410:CDS | 55.0% |
!! | ACCGTGGATTGGATAGGAGG+TGG | - | chr5_4:11390006-11390025 | None:intergenic | 55.0% |
GGCTGTGTCAGCAAACAGAG+AGG | + | chr5_4:11391394-11391413 | Msa0837410:intron | 55.0% | |
! | AAGGGACCAAACTGGTTCCC+AGG | - | chr5_4:11392448-11392467 | None:intergenic | 55.0% |
GGTCCTAGACCTAGTGTTGC+CGG | + | chr5_4:11392661-11392680 | Msa0837410:intron | 55.0% | |
GTCCTAGACCTAGTGTTGCC+GGG | + | chr5_4:11392662-11392681 | Msa0837410:intron | 55.0% | |
! | GACCACTCTAGGAGCAGTCA+AGG | + | chr5_4:11393142-11393161 | Msa0837410:three_prime_UTR | 55.0% |
ACCCTTGACTGCTCCTAGAG+TGG | - | chr5_4:11393147-11393166 | None:intergenic | 55.0% | |
TCTAGGAGCAGTCAAGGGTC+TGG | + | chr5_4:11393148-11393167 | Msa0837410:three_prime_UTR | 55.0% | |
! | TCAAGGGTCTGGCTTGTGCT+TGG | + | chr5_4:11393159-11393178 | Msa0837410:three_prime_UTR | 55.0% |
! | CGATGGGCTTCCAACGACGA+CGG | + | chr5_4:11389478-11389497 | Msa0837410:CDS | 60.0% |
TTAATCGCCGCCGTCGTCGT+TGG | - | chr5_4:11389491-11389510 | None:intergenic | 60.0% | |
CACCCGGCAACACTAGGTCT+AGG | - | chr5_4:11392667-11392686 | None:intergenic | 60.0% | |
TGGGCTTCCAACGACGACGG+CGG | + | chr5_4:11389481-11389500 | Msa0837410:CDS | 65.0% | |
! | GCCGTAGGATCAGGTTGCCG+AGG | + | chr5_4:11389863-11389882 | Msa0837410:CDS | 65.0% |
ATGCGGCACCCGGCAACACT+AGG | - | chr5_4:11392673-11392692 | None:intergenic | 65.0% | |
AGAGGCTCAGATGCGGCACC+CGG | - | chr5_4:11392683-11392702 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_4 | gene | 11389188 | 11393512 | 11389188 | ID=Msa0837410;Name=Msa0837410 |
chr5_4 | mRNA | 11389188 | 11393512 | 11389188 | ID=Msa0837410-mRNA-1;Parent=Msa0837410;Name=Msa0837410-mRNA-1;_AED=0.02;_eAED=0.02;_QI=279|1|1|1|1|1|3|372|171 |
chr5_4 | exon | 11389188 | 11389697 | 11389188 | ID=Msa0837410-mRNA-1:exon:4943;Parent=Msa0837410-mRNA-1 |
chr5_4 | exon | 11389808 | 11390023 | 11389808 | ID=Msa0837410-mRNA-1:exon:4944;Parent=Msa0837410-mRNA-1 |
chr5_4 | exon | 11393072 | 11393512 | 11393072 | ID=Msa0837410-mRNA-1:exon:4945;Parent=Msa0837410-mRNA-1 |
chr5_4 | five_prime_UTR | 11389188 | 11389466 | 11389188 | ID=Msa0837410-mRNA-1:five_prime_utr;Parent=Msa0837410-mRNA-1 |
chr5_4 | CDS | 11389467 | 11389697 | 11389467 | ID=Msa0837410-mRNA-1:cds;Parent=Msa0837410-mRNA-1 |
chr5_4 | CDS | 11389808 | 11390023 | 11389808 | ID=Msa0837410-mRNA-1:cds;Parent=Msa0837410-mRNA-1 |
chr5_4 | CDS | 11393072 | 11393140 | 11393072 | ID=Msa0837410-mRNA-1:cds;Parent=Msa0837410-mRNA-1 |
chr5_4 | three_prime_UTR | 11393141 | 11393512 | 11393141 | ID=Msa0837410-mRNA-1:three_prime_utr;Parent=Msa0837410-mRNA-1 |
Gene Sequence |
Protein sequence |