Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1213810 | sp|Q9SQI3|FATB_GOSHI | 74.279 | 416 | 96 | 6 | 1 | 411 | 1 | 410 | 0.0 | 620 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1213810 | G7JU47 | 98.792 | 414 | 5 | 0 | 1 | 414 | 1 | 414 | 0.0 | 849 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002680 | Msa1213810 | 0.848734 | 5.074033e-60 | -8.615850e-47 |
| Msa0003220 | Msa1213810 | 0.823573 | 1.288144e-53 | -8.615850e-47 |
| Msa0003270 | Msa1213810 | 0.803297 | 3.728934e-49 | -8.615850e-47 |
| Msa0004540 | Msa1213810 | 0.820045 | 8.438469e-53 | -8.615850e-47 |
| Msa0005000 | Msa1213810 | -0.803539 | 3.322590e-49 | -8.615850e-47 |
| Msa0010770 | Msa1213810 | 0.805784 | 1.129254e-49 | -8.615850e-47 |
| Msa0012940 | Msa1213810 | 0.807607 | 4.654829e-50 | -8.615850e-47 |
| Msa0039250 | Msa1213810 | 0.841703 | 4.046057e-58 | -8.615850e-47 |
| Msa0041690 | Msa1213810 | 0.822992 | 1.760225e-53 | -8.615850e-47 |
| Msa0047640 | Msa1213810 | 0.846485 | 2.109051e-59 | -8.615850e-47 |
| Msa0069600 | Msa1213810 | 0.864438 | 1.215627e-64 | -8.615850e-47 |
| Msa0070430 | Msa1213810 | 0.815198 | 1.045282e-51 | -8.615850e-47 |
| Msa0096580 | Msa1213810 | 0.814117 | 1.814125e-51 | -8.615850e-47 |
| Msa0097950 | Msa1213810 | 0.802610 | 5.169388e-49 | -8.615850e-47 |
| Msa0098390 | Msa1213810 | -0.801993 | 6.926306e-49 | -8.615850e-47 |
| Msa0115370 | Msa1213810 | 0.808194 | 3.492011e-50 | -8.615850e-47 |
| Msa0116790 | Msa1213810 | 0.864200 | 1.442442e-64 | -8.615850e-47 |
| Msa0119320 | Msa1213810 | 0.815422 | 9.322795e-52 | -8.615850e-47 |
| Msa0606810 | Msa1213810 | 0.861891 | 7.456682e-64 | -8.615850e-47 |
| Msa0610090 | Msa1213810 | 0.816014 | 6.879943e-52 | -8.615850e-47 |
| Msa0626270 | Msa1213810 | 0.805685 | 1.184915e-49 | -8.615850e-47 |
| Msa0628420 | Msa1213810 | 0.815369 | 9.578815e-52 | -8.615850e-47 |
| Msa0628500 | Msa1213810 | 0.807047 | 6.115608e-50 | -8.615850e-47 |
| Msa0630940 | Msa1213810 | 0.831742 | 1.405144e-55 | -8.615850e-47 |
| Msa0640940 | Msa1213810 | 0.809806 | 1.577507e-50 | -8.615850e-47 |
| Msa0644030 | Msa1213810 | 0.832918 | 7.185622e-56 | -8.615850e-47 |
| Msa0644800 | Msa1213810 | 0.804747 | 1.862610e-49 | -8.615850e-47 |
| Msa0658480 | Msa1213810 | 0.841773 | 3.877414e-58 | -8.615850e-47 |
| Msa0669180 | Msa1213810 | 0.822550 | 2.230916e-53 | -8.615850e-47 |
| Msa0673270 | Msa1213810 | 0.801634 | 8.207037e-49 | -8.615850e-47 |
| Msa0687230 | Msa1213810 | 0.814226 | 1.715835e-51 | -8.615850e-47 |
| Msa0689760 | Msa1213810 | 0.837449 | 5.162863e-57 | -8.615850e-47 |
| Msa0692880 | Msa1213810 | 0.826972 | 2.022757e-54 | -8.615850e-47 |
| Msa0697720 | Msa1213810 | 0.810170 | 1.317035e-50 | -8.615850e-47 |
| Msa0698100 | Msa1213810 | 0.830201 | 3.355102e-55 | -8.615850e-47 |
| Msa0713680 | Msa1213810 | 0.801018 | 1.097228e-48 | -8.615850e-47 |
| Msa0716410 | Msa1213810 | 0.818711 | 1.699476e-52 | -8.615850e-47 |
| Msa0716860 | Msa1213810 | 0.841455 | 4.704378e-58 | -8.615850e-47 |
| Msa0743530 | Msa1213810 | 0.831267 | 1.839269e-55 | -8.615850e-47 |
| Msa0744100 | Msa1213810 | 0.819371 | 1.202839e-52 | -8.615850e-47 |
| Msa0747720 | Msa1213810 | -0.802439 | 5.607258e-49 | -8.615850e-47 |
| Msa0750000 | Msa1213810 | 0.808762 | 2.641524e-50 | -8.615850e-47 |
| Msa0750250 | Msa1213810 | 0.819806 | 9.572287e-53 | -8.615850e-47 |
| Msa0756930 | Msa1213810 | 0.825331 | 4.969082e-54 | -8.615850e-47 |
| Msa0757800 | Msa1213810 | 0.818099 | 2.338790e-52 | -8.615850e-47 |
| Msa0788120 | Msa1213810 | 0.817911 | 2.578711e-52 | -8.615850e-47 |
| Msa0822170 | Msa1213810 | 0.807734 | 4.374065e-50 | -8.615850e-47 |
| Msa0825270 | Msa1213810 | 0.819124 | 1.369072e-52 | -8.615850e-47 |
| Msa0836500 | Msa1213810 | 0.836864 | 7.288738e-57 | -8.615850e-47 |
| Msa0123510 | Msa1213810 | 0.801992 | 6.930436e-49 | -8.615850e-47 |
| Msa0127850 | Msa1213810 | 0.807869 | 4.094865e-50 | -8.615850e-47 |
| Msa0130240 | Msa1213810 | 0.814464 | 1.520092e-51 | -8.615850e-47 |
| Msa0133720 | Msa1213810 | 0.834146 | 3.547625e-56 | -8.615850e-47 |
| Msa0133820 | Msa1213810 | 0.830636 | 2.626528e-55 | -8.615850e-47 |
| Msa0134000 | Msa1213810 | 0.820082 | 8.278563e-53 | -8.615850e-47 |
| Msa0137510 | Msa1213810 | 0.806911 | 6.535139e-50 | -8.615850e-47 |
| Msa0138360 | Msa1213810 | 0.836385 | 9.651582e-57 | -8.615850e-47 |
| Msa0141400 | Msa1213810 | 0.821277 | 4.398683e-53 | -8.615850e-47 |
| Msa0146080 | Msa1213810 | 0.856481 | 3.124748e-62 | -8.615850e-47 |
| Msa0147980 | Msa1213810 | 0.837699 | 4.455949e-57 | -8.615850e-47 |
| Msa0171980 | Msa1213810 | 0.804238 | 2.378154e-49 | -8.615850e-47 |
| Msa0174000 | Msa1213810 | 0.807142 | 5.840418e-50 | -8.615850e-47 |
| Msa0181000 | Msa1213810 | 0.816767 | 4.667510e-52 | -8.615850e-47 |
| Msa0193600 | Msa1213810 | 0.804768 | 1.843645e-49 | -8.615850e-47 |
| Msa0229940 | Msa1213810 | 0.815437 | 9.250896e-52 | -8.615850e-47 |
| Msa0384670 | Msa1213810 | 0.827098 | 1.887198e-54 | -8.615850e-47 |
| Msa0394690 | Msa1213810 | 0.823281 | 1.507542e-53 | -8.615850e-47 |
| Msa0431770 | Msa1213810 | 0.808576 | 2.893881e-50 | -8.615850e-47 |
| Msa0434570 | Msa1213810 | 0.830548 | 2.760866e-55 | -8.615850e-47 |
| Msa0434770 | Msa1213810 | 0.829967 | 3.826999e-55 | -8.615850e-47 |
| Msa0442310 | Msa1213810 | 0.804317 | 2.289373e-49 | -8.615850e-47 |
| Msa0443430 | Msa1213810 | 0.814171 | 1.764869e-51 | -8.615850e-47 |
| Msa0473980 | Msa1213810 | 0.805483 | 1.306082e-49 | -8.615850e-47 |
| Msa0478580 | Msa1213810 | 0.835879 | 1.297508e-56 | -8.615850e-47 |
| Msa0979810 | Msa1213810 | 0.801002 | 1.105715e-48 | -8.615850e-47 |
| Msa1004420 | Msa1213810 | 0.801859 | 7.378758e-49 | -8.615850e-47 |
| Msa1010070 | Msa1213810 | 0.813107 | 3.025206e-51 | -8.615850e-47 |
| Msa1010460 | Msa1213810 | 0.822391 | 2.428607e-53 | -8.615850e-47 |
| Msa1072600 | Msa1213810 | 0.843405 | 1.429539e-58 | -8.615850e-47 |
| Msa1072700 | Msa1213810 | 0.800318 | 1.524527e-48 | -8.615850e-47 |
| Msa1095790 | Msa1213810 | 0.811584 | 6.507821e-51 | -8.615850e-47 |
| Msa0241830 | Msa1213810 | 0.814796 | 1.283900e-51 | -8.615850e-47 |
| Msa0244970 | Msa1213810 | 0.800234 | 1.586022e-48 | -8.615850e-47 |
| Msa0273650 | Msa1213810 | 0.803159 | 3.981075e-49 | -8.615850e-47 |
| Msa0318880 | Msa1213810 | 0.802001 | 6.901580e-49 | -8.615850e-47 |
| Msa0322590 | Msa1213810 | 0.801274 | 9.727548e-49 | -8.615850e-47 |
| Msa0322900 | Msa1213810 | 0.839477 | 1.547841e-57 | -8.615850e-47 |
| Msa0343190 | Msa1213810 | 0.831951 | 1.247730e-55 | -8.615850e-47 |
| Msa0346990 | Msa1213810 | 0.819992 | 8.676822e-53 | -8.615850e-47 |
| Msa0363060 | Msa1213810 | 0.813894 | 2.031588e-51 | -8.615850e-47 |
| Msa1123350 | Msa1213810 | 0.836031 | 1.187193e-56 | -8.615850e-47 |
| Msa1127430 | Msa1213810 | 0.813325 | 2.710790e-51 | -8.615850e-47 |
| Msa1127540 | Msa1213810 | 0.842119 | 3.141865e-58 | -8.615850e-47 |
| Msa1127590 | Msa1213810 | 0.819438 | 1.161424e-52 | -8.615850e-47 |
| Msa1154490 | Msa1213810 | 0.809321 | 2.005016e-50 | -8.615850e-47 |
| Msa1158770 | Msa1213810 | 0.800478 | 1.414353e-48 | -8.615850e-47 |
| Msa1169720 | Msa1213810 | 0.847390 | 1.191795e-59 | -8.615850e-47 |
| Msa1199290 | Msa1213810 | 0.802508 | 5.427832e-49 | -8.615850e-47 |
| Msa1201830 | Msa1213810 | 0.818277 | 2.131577e-52 | -8.615850e-47 |
| Msa1205480 | Msa1213810 | 0.827573 | 1.452182e-54 | -8.615850e-47 |
| Msa1205590 | Msa1213810 | 0.820589 | 6.332570e-53 | -8.615850e-47 |
| Msa1206650 | Msa1213810 | 0.830515 | 2.812275e-55 | -8.615850e-47 |
| Msa1207740 | Msa1213810 | 0.810099 | 1.363946e-50 | -8.615850e-47 |
| Msa1211340 | Msa1213810 | 0.824408 | 8.204788e-54 | -8.615850e-47 |
| Msa1213810 | Msa1214320 | 0.967240 | 5.252971e-127 | -8.615850e-47 |
| Msa1213810 | Msa1223330 | 0.804337 | 2.267352e-49 | -8.615850e-47 |
| Msa1213810 | Msa1234550 | 0.818163 | 2.261847e-52 | -8.615850e-47 |
| Msa1213810 | Msa1242640 | 0.806239 | 9.060325e-50 | -8.615850e-47 |
| Msa1213810 | Msa1259640 | 0.822126 | 2.799140e-53 | -8.615850e-47 |
| Msa1213810 | Msa1261070 | 0.948670 | 5.954494e-107 | -8.615850e-47 |
| Msa1213810 | Msa1262960 | 0.806158 | 9.421452e-50 | -8.615850e-47 |
| Msa1213810 | Msa1266330 | 0.810389 | 1.181213e-50 | -8.615850e-47 |
| Msa1213810 | Msa1273330 | 0.820583 | 6.353691e-53 | -8.615850e-47 |
| Msa1213810 | Msa1277080 | 0.823104 | 1.657400e-53 | -8.615850e-47 |
| Msa1213810 | Msa1299000 | 0.808099 | 3.657590e-50 | -8.615850e-47 |
| Msa1213810 | Msa1299330 | 0.821725 | 3.465533e-53 | -8.615850e-47 |
| Msa1213810 | Msa1300450 | 0.807563 | 4.756220e-50 | -8.615850e-47 |
| Msa1213810 | Msa1302060 | 0.811184 | 7.950338e-51 | -8.615850e-47 |
| Msa1213810 | Msa1320820 | 0.815991 | 6.961219e-52 | -8.615850e-47 |
| Msa1213810 | Msa1329450 | 0.813022 | 3.157794e-51 | -8.615850e-47 |
| Msa1213810 | Msa1329790 | 0.817063 | 4.005353e-52 | -8.615850e-47 |
| Msa1213810 | Msa1333970 | 0.806128 | 9.560689e-50 | -8.615850e-47 |
| Msa1213810 | Msa1335160 | 0.825595 | 4.301740e-54 | -8.615850e-47 |
| Msa1213810 | Msa1338830 | 0.801950 | 7.068083e-49 | -8.615850e-47 |
| Msa1213810 | Msa1344310 | 0.820068 | 8.339237e-53 | -8.615850e-47 |
| Msa1213810 | Msa1356610 | 0.813367 | 2.652702e-51 | -8.615850e-47 |
| Msa1213810 | Msa1359920 | 0.810149 | 1.330273e-50 | -8.615850e-47 |
| Msa1213810 | Msa1371520 | 0.823918 | 1.069377e-53 | -8.615850e-47 |
| Msa1213810 | Msa1373820 | 0.816775 | 4.646306e-52 | -8.615850e-47 |
| Msa1213810 | Msa1393820 | 0.823448 | 1.377613e-53 | -8.615850e-47 |
| Msa1213810 | Msa1411950 | 0.833728 | 4.514717e-56 | -8.615850e-47 |
| Msa1213810 | Msa1416260 | 0.822749 | 2.005359e-53 | -8.615850e-47 |
| Msa1213810 | Msa1420250 | 0.837850 | 4.075020e-57 | -8.615850e-47 |
| Msa1213810 | Msa1426910 | 0.837709 | 4.429494e-57 | -8.615850e-47 |
| Msa1213810 | Msa1432480 | 0.824467 | 7.945859e-54 | -8.615850e-47 |
| Msa0487780 | Msa1213810 | 0.807567 | 4.746854e-50 | -8.615850e-47 |
| Msa0491000 | Msa1213810 | 0.814559 | 1.448665e-51 | -8.615850e-47 |
| Msa0518030 | Msa1213810 | 0.813531 | 2.441727e-51 | -8.615850e-47 |
| Msa0518960 | Msa1213810 | 0.804877 | 1.749323e-49 | -8.615850e-47 |
| Msa0527190 | Msa1213810 | 0.819105 | 1.382691e-52 | -8.615850e-47 |
| Msa0531250 | Msa1213810 | 0.824604 | 7.376038e-54 | -8.615850e-47 |
| Msa0534400 | Msa1213810 | 0.803744 | 3.012190e-49 | -8.615850e-47 |
| Msa0544730 | Msa1213810 | 0.800109 | 1.681399e-48 | -8.615850e-47 |
| Msa0547990 | Msa1213810 | 0.837912 | 3.928897e-57 | -8.615850e-47 |
| Msa0556010 | Msa1213810 | 0.841876 | 3.640997e-58 | -8.615850e-47 |
| Msa0583500 | Msa1213810 | 0.833109 | 6.439473e-56 | -8.615850e-47 |
| Msa0584550 | Msa1213810 | 0.802137 | 6.471691e-49 | -8.615850e-47 |
| Msa0588120 | Msa1213810 | 0.805049 | 1.610555e-49 | -8.615850e-47 |
| Msa0590640 | Msa1213810 | 0.802624 | 5.135486e-49 | -8.615850e-47 |
| Msa0597770 | Msa1213810 | 0.860726 | 1.689436e-63 | -8.615850e-47 |
| Msa0599900 | Msa1213810 | 0.800691 | 1.279860e-48 | -8.615850e-47 |
| Msa0850150 | Msa1213810 | 0.810914 | 9.093190e-51 | -8.615850e-47 |
| Msa0851470 | Msa1213810 | 0.800159 | 1.642199e-48 | -8.615850e-47 |
| Msa0870650 | Msa1213810 | 0.808079 | 3.693444e-50 | -8.615850e-47 |
| Msa0888940 | Msa1213810 | 0.803261 | 3.792157e-49 | -8.615850e-47 |
| Msa0903780 | Msa1213810 | 0.839980 | 1.145189e-57 | -8.615850e-47 |
| Msa0905590 | Msa1213810 | 0.809973 | 1.451858e-50 | -8.615850e-47 |
| Msa0937430 | Msa1213810 | 0.818618 | 1.784284e-52 | -8.615850e-47 |
| Msa0943170 | Msa1213810 | 0.806540 | 7.828786e-50 | -8.615850e-47 |
| Msa0969330 | Msa1213810 | 0.831001 | 2.137602e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1213810 | MtrunA17_Chr4g0062811 | 98.792 | 414 | 5 | 0 | 1 | 414 | 1 | 414 | 0.0 | 849 |
| Msa1213810 | MtrunA17_Chr2g0306391 | 78.520 | 419 | 81 | 5 | 1 | 414 | 1 | 415 | 0.0 | 660 |
| Msa1213810 | MtrunA17_Chr3g0132041 | 53.025 | 281 | 124 | 4 | 126 | 398 | 103 | 383 | 2.23e-103 | 311 |
| Msa1213810 | MtrunA17_Chr7g0235761 | 46.179 | 301 | 140 | 6 | 119 | 398 | 67 | 366 | 4.01e-84 | 261 |
| Msa1213810 | MtrunA17_Chr1g0208941 | 43.631 | 314 | 118 | 4 | 119 | 398 | 75 | 363 | 3.46e-81 | 254 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1213810 | AT1G08510.1 | 74.010 | 404 | 97 | 3 | 1 | 398 | 1 | 402 | 0.0 | 609 |
| Msa1213810 | AT3G25110.1 | 48.814 | 295 | 135 | 7 | 119 | 399 | 68 | 360 | 3.93e-90 | 277 |
| Msa1213810 | AT4G13050.1 | 46.667 | 300 | 134 | 7 | 121 | 398 | 69 | 364 | 1.90e-87 | 270 |
Find 169 sgRNAs with CRISPR-Local
Find 340 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGACTTCTTCCGGAATTT+TGG | 0.170299 | 8_1:+74000842 | None:intergenic |
| ATTTAATTGTTCGCTTAAAA+TGG | 0.207001 | 8_1:-73999114 | Msa1213810:three_prime_UTR |
| CCCTGTTACTTCATCCTTGC+CGG | 0.219883 | 8_1:-74002402 | Msa1213810:CDS |
| TCTATCAGATCGTATGAAAT+TGG | 0.224730 | 8_1:-74002011 | Msa1213810:CDS |
| CTGTCATCTTCTTCCAGAAT+TGG | 0.234599 | 8_1:+74000786 | None:intergenic |
| ACCAGAAAATAAATGAAATT+TGG | 0.239522 | 8_1:+73999167 | None:intergenic |
| TGTGGAATCTGCACCAATTC+TGG | 0.245449 | 8_1:-74000799 | Msa1213810:CDS |
| TTGGAGTAGTGATTGATTAT+AGG | 0.248424 | 8_1:+74003928 | None:intergenic |
| ATGATTCATTATTGTATCTA+TGG | 0.249215 | 8_1:+74001971 | None:intergenic |
| ACGTCCCACATGGGAATTAT+TGG | 0.254710 | 8_1:-73998939 | Msa1213810:three_prime_UTR |
| TATTATTATAACATGCTTAA+AGG | 0.258827 | 8_1:+73998898 | None:intergenic |
| CCACTTTGATATTGTGAATC+AGG | 0.261585 | 8_1:-73999422 | Msa1213810:CDS |
| AAGAAAATTGCATCTTTAGA+AGG | 0.262385 | 8_1:+73999057 | None:intergenic |
| CATGCCCCTCCCAAGATTAA+TGG | 0.282466 | 8_1:-74002284 | Msa1213810:CDS |
| ATCAAAGTGGTTCACAGGTT+TGG | 0.283485 | 8_1:+73999435 | None:intergenic |
| GTTAAAACTGCGGGGCTTCT+TGG | 0.293306 | 8_1:-74001786 | Msa1213810:CDS |
| GTGTTGCTTTGGTGCGTAAA+AGG | 0.296067 | 8_1:-73999254 | Msa1213810:three_prime_UTR |
| GACTCTGGTGGCAACAAAAT+TGG | 0.296666 | 8_1:-74002380 | Msa1213810:CDS |
| TCAAAGTGGTTCACAGGTTT+GGG | 0.298152 | 8_1:+73999436 | None:intergenic |
| GGAAATGAGATTATTTAAAC+AGG | 0.315443 | 8_1:+74003856 | None:intergenic |
| AACTTTGGTTCCATTAATCT+TGG | 0.321274 | 8_1:+74002274 | None:intergenic |
| CCTTCTAATTTGTGTTGCTT+TGG | 0.321827 | 8_1:-73999265 | Msa1213810:three_prime_UTR |
| GTCTGTGCTTTCAGCCTAGA+TGG | 0.322191 | 8_1:-74000620 | Msa1213810:intron |
| TGGAGTAGTGATTGATTATA+GGG | 0.334581 | 8_1:+74003929 | None:intergenic |
| TGGTATAGGCAAAATTGTTC+AGG | 0.344538 | 8_1:-74002060 | Msa1213810:CDS |
| ATCTCTCCTCTGACTTCTTC+CGG | 0.345295 | 8_1:+74000834 | None:intergenic |
| GAAGTACATTGGCTGGATTC+TGG | 0.345569 | 8_1:-74000562 | Msa1213810:CDS |
| GGGCTTCTTGGTGATGGCTT+TGG | 0.357333 | 8_1:-74001774 | Msa1213810:CDS |
| GCTAATTACAATGAGATATA+TGG | 0.358437 | 8_1:+73999221 | None:intergenic |
| TACAATAATGAATCATTTGC+AGG | 0.359879 | 8_1:-74001964 | Msa1213810:intron |
| CAGAAAGCTGTCCAAAATTC+CGG | 0.364635 | 8_1:-74000853 | Msa1213810:CDS |
| CAGCATCAGATACAGAAGTT+AGG | 0.369505 | 8_1:+73999557 | None:intergenic |
| TCTCTTCCCTAGGGTTAAAC+TGG | 0.377506 | 8_1:-73999345 | Msa1213810:three_prime_UTR |
| GTGCTATGACTTTGGAGTAT+AGG | 0.377990 | 8_1:-73999612 | Msa1213810:CDS |
| CATTTGCTTCGACTTGAAGA+TGG | 0.382701 | 8_1:-73999493 | Msa1213810:CDS |
| TGTTGCTTTGGTGCGTAAAA+GGG | 0.382744 | 8_1:-73999253 | Msa1213810:three_prime_UTR |
| TGAGCTTTGTGCTATGACTT+TGG | 0.385914 | 8_1:-73999620 | Msa1213810:CDS |
| TTTCGTGATCGACAGTGTTT+GGG | 0.391693 | 8_1:-74000895 | Msa1213810:intron |
| TCCGGCAAGGATGAAGTAAC+AGG | 0.392133 | 8_1:+74002401 | None:intergenic |
| GAAGAAGTCAGAGGAGAGAT+AGG | 0.399585 | 8_1:-74000831 | Msa1213810:CDS |
| GAAACTTGGGTTTCTGCATC+GGG | 0.406812 | 8_1:-74001370 | Msa1213810:CDS |
| CCAAAGCAACACAAATTAGA+AGG | 0.409398 | 8_1:+73999265 | None:intergenic |
| AAACCTTAGGTGCTTCCTGC+TGG | 0.412033 | 8_1:+73999397 | None:intergenic |
| GGTGGGAATGCGAACCTTGG+AGG | 0.413247 | 8_1:-74002356 | Msa1213810:CDS |
| GGAAGAAGATGACAGAAAAC+TGG | 0.423587 | 8_1:-74000778 | Msa1213810:CDS |
| TTCTACAGATGTAGAAACTT+TGG | 0.428061 | 8_1:+74002259 | None:intergenic |
| ATTAATCTTGGGAGGGGCAT+GGG | 0.432092 | 8_1:+74002286 | None:intergenic |
| GACATGCTGATTGACCCTTT+TGG | 0.434816 | 8_1:-74002080 | Msa1213810:CDS |
| CGTCCCACATGGGAATTATT+GGG | 0.436232 | 8_1:-73998938 | Msa1213810:three_prime_UTR |
| TTTCTGGTTGCTATAGTGCT+AGG | 0.437871 | 8_1:-73999152 | Msa1213810:three_prime_UTR |
| GCATGCTCCAGTCAGGTAAC+TGG | 0.441878 | 8_1:+74002180 | None:intergenic |
| GGTTCCATTAATCTTGGGAG+GGG | 0.445528 | 8_1:+74002280 | None:intergenic |
| CATTAATCTTGGGAGGGGCA+TGG | 0.448502 | 8_1:+74002285 | None:intergenic |
| GCAAATGCTGGCACTCAATC+CGG | 0.451066 | 8_1:+73999509 | None:intergenic |
| ACTTCATCCTTGCCGGACTC+TGG | 0.452399 | 8_1:-74002395 | Msa1213810:CDS |
| CTTAATCATGTTAAAACTGC+GGG | 0.456249 | 8_1:-74001795 | Msa1213810:CDS |
| ACTTTGGTTCCATTAATCTT+GGG | 0.456944 | 8_1:+74002275 | None:intergenic |
| TGCCGTCGTCGCAATCCTCT+AGG | 0.464686 | 8_1:-74002214 | Msa1213810:CDS |
| CTAACTTCTGTATCTGATGC+TGG | 0.466418 | 8_1:-73999556 | Msa1213810:CDS |
| ATCGAGAATGAGAAGAAGGA+AGG | 0.473005 | 8_1:+74003751 | None:intergenic |
| ATTTGCTTCGACTTGAAGAT+GGG | 0.475110 | 8_1:-73999492 | Msa1213810:CDS |
| TATAACATGCTTAAAGGAGA+AGG | 0.476987 | 8_1:+73998904 | None:intergenic |
| ATATTATAAGACATGTAGAT+TGG | 0.477574 | 8_1:+73999289 | None:intergenic |
| GCAAGAAGCATGCTCCAGTC+AGG | 0.478605 | 8_1:+74002173 | None:intergenic |
| ACAATGTGAAGTACATTGGC+TGG | 0.478806 | 8_1:-74000569 | Msa1213810:CDS |
| GTTTCTGCATCGGGCAAGAA+TGG | 0.484024 | 8_1:-74001361 | Msa1213810:CDS |
| ATGTTGTTCATGTAGAAACT+TGG | 0.487017 | 8_1:-74001384 | Msa1213810:CDS |
| GAGAGATAGAGTAGTAGAGC+AGG | 0.489020 | 8_1:+73999197 | None:intergenic |
| TGGTTGCTATAGTGCTAGGC+TGG | 0.490240 | 8_1:-73999148 | Msa1213810:three_prime_UTR |
| AGCATCAGATACAGAAGTTA+GGG | 0.491194 | 8_1:+73999558 | None:intergenic |
| GTATACAATCACAGTTGTAT+TGG | 0.492198 | 8_1:+73998982 | None:intergenic |
| ACAATATCAAAGTGGTTCAC+AGG | 0.493409 | 8_1:+73999430 | None:intergenic |
| AACAGTGGATGATGCTCGAT+TGG | 0.493658 | 8_1:-74002118 | Msa1213810:CDS |
| ACTGCGGGGCTTCTTGGTGA+TGG | 0.497472 | 8_1:-74001780 | Msa1213810:CDS |
| AGAAAATTGCATCTTTAGAA+GGG | 0.502651 | 8_1:+73999058 | None:intergenic |
| AGAAACTTGGGTTTCTGCAT+CGG | 0.502842 | 8_1:-74001371 | Msa1213810:CDS |
| AGAATGGTATGCGTCGTGAT+TGG | 0.502971 | 8_1:-74001345 | Msa1213810:CDS |
| ACATCTAGATCACTCCATCT+AGG | 0.503730 | 8_1:+74000606 | None:intergenic |
| GTTCCAGCAGGAAGCACCTA+AGG | 0.506583 | 8_1:-73999400 | Msa1213810:exon |
| TCGAGAATGAGAAGAAGGAA+GGG | 0.507050 | 8_1:+74003752 | None:intergenic |
| ATTGGACTATGGTGTTGGAT+TGG | 0.509250 | 8_1:+74003909 | None:intergenic |
| GTGGGAATGCGAACCTTGGA+GGG | 0.511900 | 8_1:-74002355 | Msa1213810:CDS |
| GTCCTAGAGGATTGCGACGA+CGG | 0.514658 | 8_1:+74002212 | None:intergenic |
| AGAAATCGAGAATGAGAAGA+AGG | 0.515121 | 8_1:+74003747 | None:intergenic |
| GTGAAATCAGAGGAAGAAGA+AGG | 0.517956 | 8_1:+74003778 | None:intergenic |
| ATCAGAGGAAGAAGAAGGAA+AGG | 0.518581 | 8_1:+74003783 | None:intergenic |
| GTAATCTAGCTCAAAGCGGC+CGG | 0.520723 | 8_1:-73999528 | Msa1213810:CDS |
| CTTTCTTCTCTTCTTCACTC+TGG | 0.520960 | 8_1:-74003710 | Msa1213810:intron |
| TTATCAACCAGTTACCTGAC+TGG | 0.521390 | 8_1:-74002187 | Msa1213810:CDS |
| AAATCTAAACATGCGTCTGC+GGG | 0.521491 | 8_1:-74002329 | Msa1213810:CDS |
| CTATGACTTTGGAGTATAGG+AGG | 0.523086 | 8_1:-73999609 | Msa1213810:CDS |
| CATGAACCATTCAAAACCTT+AGG | 0.524151 | 8_1:+73999384 | None:intergenic |
| TGCCATGTCTCGGATATATG+TGG | 0.524343 | 8_1:-73998859 | Msa1213810:three_prime_UTR |
| GTTAGAACCAGTTTAACCCT+AGG | 0.525979 | 8_1:+73999338 | None:intergenic |
| ATCATATCAGTCTCTTCCCT+AGG | 0.526127 | 8_1:-73999355 | Msa1213810:three_prime_UTR |
| GCCATGTCTCGGATATATGT+GGG | 0.533513 | 8_1:-73998858 | Msa1213810:three_prime_UTR |
| CTTCAAGTCGAAGCAAATGC+TGG | 0.533924 | 8_1:+73999497 | None:intergenic |
| TGGTTCCATTAATCTTGGGA+GGG | 0.538281 | 8_1:+74002279 | None:intergenic |
| TGTTGTTCATGTAGAAACTT+GGG | 0.541342 | 8_1:-74001383 | Msa1213810:CDS |
| ACAGCGGATTATATCCGCTC+GGG | 0.549430 | 8_1:-74000738 | Msa1213810:CDS |
| TTGGTTCCATTAATCTTGGG+AGG | 0.550365 | 8_1:+74002278 | None:intergenic |
| GTCTGCGGGCTTGCAAGTAA+AGG | 0.550821 | 8_1:-74002315 | Msa1213810:CDS |
| GGAAGGGAAGGTGAAATCAG+AGG | 0.552484 | 8_1:+74003768 | None:intergenic |
| CAGATACAGAAGTTAGGGAC+TGG | 0.555844 | 8_1:+73999563 | None:intergenic |
| TAAATCTAAACATGCGTCTG+CGG | 0.556057 | 8_1:-74002330 | Msa1213810:CDS |
| ATAACATGCTTAAAGGAGAA+GGG | 0.557867 | 8_1:+73998905 | None:intergenic |
| ATTGTTCGCTTAAAATGGCT+AGG | 0.558748 | 8_1:-73999109 | Msa1213810:three_prime_UTR |
| GGTGGCAACAAAATTGGTGG+TGG | 0.558849 | 8_1:-74002374 | Msa1213810:CDS |
| TTGTGAGGGGTAGAACTAAG+TGG | 0.561099 | 8_1:-73999462 | Msa1213810:CDS |
| AAATCTTGACGAGAGCCTCC+AGG | 0.565088 | 8_1:-74001297 | Msa1213810:intron |
| GAATGAGAAGAAGGAAGGGA+AGG | 0.566032 | 8_1:+74003756 | None:intergenic |
| TGCTCGATTGGAAGCCAAGA+CGG | 0.569855 | 8_1:-74002106 | Msa1213810:CDS |
| TCTGTATCTGATGCTGGTGT+TGG | 0.570023 | 8_1:-73999550 | Msa1213810:CDS |
| GTTGCTTTGGTGCGTAAAAG+GGG | 0.571711 | 8_1:-73999252 | Msa1213810:three_prime_UTR |
| TGAAATTGGTGCGGATCGAA+CGG | 0.573921 | 8_1:-74001997 | Msa1213810:CDS |
| GGTGGTGGGAATGCGAACCT+TGG | 0.574054 | 8_1:-74002359 | Msa1213810:CDS |
| ATGTATGCAAACGTCCCACA+TGG | 0.574395 | 8_1:-73998949 | Msa1213810:three_prime_UTR |
| ATCAGCATGTCAGACCGTCT+TGG | 0.574490 | 8_1:+74002092 | None:intergenic |
| CACAGCGGATTATATCCGCT+CGG | 0.579496 | 8_1:-74000739 | Msa1213810:CDS |
| ACGTTTGCATACATACAAGC+TGG | 0.582191 | 8_1:+73998958 | None:intergenic |
| GTTTAGATTTAAGCCCTCCA+AGG | 0.590994 | 8_1:+74002342 | None:intergenic |
| TCATCCTTGCCGGACTCTGG+TGG | 0.592944 | 8_1:-74002392 | Msa1213810:CDS |
| ATTGTGAATCAGGTTCCAGC+AGG | 0.595303 | 8_1:-73999412 | Msa1213810:CDS |
| TCAGAGGAAGAAGAAGGAAA+GGG | 0.596772 | 8_1:+74003784 | None:intergenic |
| TTAGAACCAGTTTAACCCTA+GGG | 0.601322 | 8_1:+73999339 | None:intergenic |
| AAAATAGAATCTCATTATGG+TGG | 0.602507 | 8_1:-74002444 | Msa1213810:exon |
| TCATATCAGTCTCTTCCCTA+GGG | 0.611662 | 8_1:-73999354 | Msa1213810:three_prime_UTR |
| ACAAGGTACCAAGCAAAATG+TGG | 0.614024 | 8_1:+73998807 | None:intergenic |
| TCTGGTGGCAACAAAATTGG+TGG | 0.617307 | 8_1:-74002377 | Msa1213810:CDS |
| TGCTTTGGTGCGTAAAAGGG+GGG | 0.617854 | 8_1:-73999250 | Msa1213810:three_prime_UTR |
| GTTAACAATGTGAAGTACAT+TGG | 0.619008 | 8_1:-74000573 | Msa1213810:CDS |
| AGATGGGGCTGAAATTGTGA+GGG | 0.620618 | 8_1:-73999476 | Msa1213810:CDS |
| GAAATGAGATTATTTAAACA+GGG | 0.622857 | 8_1:+74003857 | None:intergenic |
| CCATGTCTCGGATATATGTG+GGG | 0.624563 | 8_1:-73998857 | Msa1213810:three_prime_UTR |
| GTATAGGAGGGAGTGTGGCA+AGG | 0.625777 | 8_1:-73999596 | Msa1213810:CDS |
| CTGGTTGATAAAAGTCCTAG+AGG | 0.628361 | 8_1:+74002199 | None:intergenic |
| TTTGCTTCGACTTGAAGATG+GGG | 0.629398 | 8_1:-73999491 | Msa1213810:CDS |
| TTGGAGTATAGGAGGGAGTG+TGG | 0.631407 | 8_1:-73999601 | Msa1213810:CDS |
| CCTGATTCACAATATCAAAG+TGG | 0.634270 | 8_1:+73999422 | None:intergenic |
| CACAAAGCTCATGACTCTCG+AGG | 0.634653 | 8_1:+73999632 | None:intergenic |
| CCCCACATATATCCGAGACA+TGG | 0.635277 | 8_1:+73998857 | None:intergenic |
| TGTAGAAAACTATAAGCATG+AGG | 0.636729 | 8_1:-74002243 | Msa1213810:CDS |
| TTTACGTGATTATAATACTG+GGG | 0.636769 | 8_1:-74001320 | Msa1213810:CDS |
| AAGATGGGGCTGAAATTGTG+AGG | 0.638157 | 8_1:-73999477 | Msa1213810:CDS |
| GTTGCCACCAGAGTCCGGCA+AGG | 0.642093 | 8_1:+74002388 | None:intergenic |
| TGCACCCAATAATTCCCATG+TGG | 0.645028 | 8_1:+73998934 | None:intergenic |
| GTGGCAACAAAATTGGTGGT+GGG | 0.645115 | 8_1:-74002373 | Msa1213810:CDS |
| ACACAAGCAAAACTCTTCAG+AGG | 0.647990 | 8_1:+73999316 | None:intergenic |
| ATAGGCAAAATTGTTCAGGA+TGG | 0.648420 | 8_1:-74002056 | Msa1213810:CDS |
| TTGCTTTGGTGCGTAAAAGG+GGG | 0.650036 | 8_1:-73999251 | Msa1213810:three_prime_UTR |
| TTGTTGATCGTTATCCTACG+TGG | 0.650683 | 8_1:-74001692 | Msa1213810:intron |
| GCACCCAATAATTCCCATGT+GGG | 0.652186 | 8_1:+73998935 | None:intergenic |
| CATGTCTCGGATATATGTGG+GGG | 0.656755 | 8_1:-73998856 | Msa1213810:three_prime_UTR |
| ACTTAATATGGGTAGTTGCG+CGG | 0.660135 | 8_1:-74001725 | Msa1213810:CDS |
| GTACATTGGCTGGATTCTGG+AGG | 0.665676 | 8_1:-74000559 | Msa1213810:intron |
| TATGACTTTGGAGTATAGGA+GGG | 0.670410 | 8_1:-73999608 | Msa1213810:CDS |
| ACTTAATCATGTTAAAACTG+CGG | 0.670918 | 8_1:-74001796 | Msa1213810:CDS |
| TGTATGCAAACGTCCCACAT+GGG | 0.675368 | 8_1:-73998948 | Msa1213810:three_prime_UTR |
| CCGGCAAGGATGAAGTAACA+GGG | 0.676128 | 8_1:+74002402 | None:intergenic |
| AAAATTCCGGAAGAAGTCAG+AGG | 0.678251 | 8_1:-74000840 | Msa1213810:CDS |
| TTAATCATGTTAAAACTGCG+GGG | 0.691366 | 8_1:-74001794 | Msa1213810:CDS |
| GATGGGGCTGAAATTGTGAG+GGG | 0.696909 | 8_1:-73999475 | Msa1213810:CDS |
| TGACTCTCGAGGATTGACTG+TGG | 0.701079 | 8_1:+73999643 | None:intergenic |
| TGAGGGGTAGAACTAAGTGG+AGG | 0.718786 | 8_1:-73999459 | Msa1213810:CDS |
| CAGATCGTATGAAATTGGTG+CGG | 0.718974 | 8_1:-74002006 | Msa1213810:CDS |
| GACATACACTTAAACCCGAG+CGG | 0.720447 | 8_1:+74000724 | None:intergenic |
| GTTGGTAATCTAGCTCAAAG+CGG | 0.743042 | 8_1:-73999532 | Msa1213810:CDS |
| GTATGGATGACTTACCACGT+AGG | 0.760670 | 8_1:+74001678 | None:intergenic |
| TAAACTTGATGACAGCACAG+CGG | 0.795237 | 8_1:-74000754 | Msa1213810:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTTTGGAAAAAAAAT+TGG | + | chr8_1:73998850-73998869 | None:intergenic | 10.0% |
| !!! | TAAAAATGAATCTTTATTTA+TGG | - | chr8_1:74000799-74000818 | Msa1213810:CDS | 10.0% |
| !!! | TTTTGATAAATTTGTTTATT+TGG | + | chr8_1:74001615-74001634 | None:intergenic | 10.0% |
| !!! | GTTTTTTTTTTTGTTAGTAT+TGG | - | chr8_1:73999728-73999747 | Msa1213810:intron | 15.0% |
| !! | TAAAAAATAGAATCTCATTA+TGG | - | chr8_1:74000291-74000310 | Msa1213810:intron | 15.0% |
| !!! | TTATTCTACAGATTTTAATA+TGG | + | chr8_1:74001715-74001734 | None:intergenic | 15.0% |
| !! | AAATTAAATAAAATTCTCGA+TGG | - | chr8_1:74002286-74002305 | Msa1213810:CDS | 15.0% |
| !! | AATGTTAGTATATATTGTTT+AGG | - | chr8_1:74002507-74002526 | Msa1213810:intron | 15.0% |
| !! | ATGTTAGTATATATTGTTTA+GGG | - | chr8_1:74002508-74002527 | Msa1213810:intron | 15.0% |
| !!! | ATATTATTATTCTTTTCTCT+TGG | - | chr8_1:74003657-74003676 | Msa1213810:intron | 15.0% |
| !! | TATTATTATAACATGCTTAA+AGG | + | chr8_1:74003843-74003862 | None:intergenic | 15.0% |
| !!! | GTGTATGTATAGTATTTTTT+TGG | + | chr8_1:73998862-73998881 | None:intergenic | 20.0% |
| !! | GAAATGAGATTATTTAAACA+GGG | + | chr8_1:73998884-73998903 | None:intergenic | 20.0% |
| !!! | ATTGTGTAATTTTAGATCAT+AGG | + | chr8_1:73998932-73998951 | None:intergenic | 20.0% |
| !!! | TTAATTTTGAAATTATCGAG+AGG | - | chr8_1:73999210-73999229 | Msa1213810:three_prime_UTR | 20.0% |
| !!! | TTTTTACTTTTCTTGTTTTG+CGG | - | chr8_1:73999343-73999362 | Msa1213810:three_prime_UTR | 20.0% |
| !!! | AGTTGTTATTTGTTTACTTT+TGG | - | chr8_1:73999396-73999415 | Msa1213810:exon | 20.0% |
| !! | AAATTCTACATCATCTAAAA+TGG | + | chr8_1:73999500-73999519 | None:intergenic | 20.0% |
| !!! | TTTTTGTTAGTATTGGAATT+AGG | - | chr8_1:73999735-73999754 | Msa1213810:intron | 20.0% |
| !! | TATAAAGAGAAACATAAGTT+TGG | + | chr8_1:74000068-74000087 | None:intergenic | 20.0% |
| !! | ATGATTCATTATTGTATCTA+TGG | + | chr8_1:74000770-74000789 | None:intergenic | 20.0% |
| !!! | ACAATTATTTGTTTGATAAC+AGG | - | chr8_1:74000912-74000931 | Msa1213810:intron | 20.0% |
| !!! | TAGTTGTTTTGATCTTTATA+AGG | - | chr8_1:74001143-74001162 | Msa1213810:intron | 20.0% |
| !!! | TCAAGTATCTATATTTTTTC+AGG | - | chr8_1:74001327-74001346 | Msa1213810:CDS | 20.0% |
| !!! | CAAGTATCTATATTTTTTCA+GGG | - | chr8_1:74001328-74001347 | Msa1213810:CDS | 20.0% |
| !!! | AAGTATCTATATTTTTTCAG+GGG | - | chr8_1:74001329-74001348 | Msa1213810:CDS | 20.0% |
| !!! | TTTTACGTGATTATAATACT+GGG | - | chr8_1:74001417-74001436 | Msa1213810:intron | 20.0% |
| !! | ACACAATATGTAATCTAATT+AGG | + | chr8_1:74002100-74002119 | None:intergenic | 20.0% |
| !! | AAATGAAACATGATATAACT+TGG | - | chr8_1:74002837-74002856 | Msa1213810:intron | 20.0% |
| !! | AATATGCGACTAATTAATTA+GGG | + | chr8_1:74002967-74002986 | None:intergenic | 20.0% |
| !! | ATATTATAAGACATGTAGAT+TGG | + | chr8_1:74003452-74003471 | None:intergenic | 20.0% |
| !!! | TCCAAATTTCATTTATTTTC+TGG | - | chr8_1:74003570-74003589 | Msa1213810:intron | 20.0% |
| !! | ACCAGAAAATAAATGAAATT+TGG | + | chr8_1:74003574-74003593 | None:intergenic | 20.0% |
| !! | ATTTAATTGTTCGCTTAAAA+TGG | - | chr8_1:74003624-74003643 | Msa1213810:intron | 20.0% |
| ! | TTGGAAAAAAAATTGGACTA+TGG | + | chr8_1:73998843-73998862 | None:intergenic | 25.0% |
| ! | GGAAATGAGATTATTTAAAC+AGG | + | chr8_1:73998885-73998904 | None:intergenic | 25.0% |
| !!! | TCTCTTCTTTTCTTAATTTG+TGG | + | chr8_1:73998906-73998925 | None:intergenic | 25.0% |
| !! | TAAATTTGAAAAGCACGTTA+AGG | + | chr8_1:73999083-73999102 | None:intergenic | 25.0% |
| ! | GATGAAAAATGCAGAAAAAA+CGG | + | chr8_1:73999154-73999173 | None:intergenic | 25.0% |
| ! | GCAAAACAAGAAAAGTAAAA+AGG | + | chr8_1:73999344-73999363 | None:intergenic | 25.0% |
| ! | ACGTATCATGATTATATGAA+TGG | - | chr8_1:73999580-73999599 | Msa1213810:CDS | 25.0% |
| ! | CAGAAGTTGCAAATATTATA+TGG | - | chr8_1:73999686-73999705 | Msa1213810:intron | 25.0% |
| !! | TTATACCTTTTCTCTCATTT+AGG | - | chr8_1:73999768-73999787 | Msa1213810:intron | 25.0% |
| !!! | ATGTTGCTATTGTTTGTTAT+TGG | - | chr8_1:74000182-74000201 | Msa1213810:intron | 25.0% |
| !!! | TGTTGCTATTGTTTGTTATT+GGG | - | chr8_1:74000183-74000202 | Msa1213810:intron | 25.0% |
| !!! | GCGTTGATACATTTTTTTTT+AGG | - | chr8_1:74000225-74000244 | Msa1213810:intron | 25.0% |
| ! | AAAATAGAATCTCATTATGG+TGG | - | chr8_1:74000294-74000313 | Msa1213810:intron | 25.0% |
| ! | TACAATAATGAATCATTTGC+AGG | - | chr8_1:74000774-74000793 | Msa1213810:CDS | 25.0% |
| !! | TGAATCTTTATTTATGGTCT+TGG | - | chr8_1:74000805-74000824 | Msa1213810:CDS | 25.0% |
| !! | GAATCTTTATTTATGGTCTT+GGG | - | chr8_1:74000806-74000825 | Msa1213810:CDS | 25.0% |
| ! | TATACATATAAGCTTGTATG+AGG | + | chr8_1:74000890-74000909 | None:intergenic | 25.0% |
| ! | ACTTAATCATGTTAAAACTG+CGG | - | chr8_1:74000942-74000961 | Msa1213810:intron | 25.0% |
| ! | TGTGCAAAAAGAACTTAATA+TGG | - | chr8_1:74001001-74001020 | Msa1213810:intron | 25.0% |
| ! | GTGCAAAAAGAACTTAATAT+GGG | - | chr8_1:74001002-74001021 | Msa1213810:intron | 25.0% |
| !!! | GTTTTGATCTTTATAAGGAA+TGG | - | chr8_1:74001148-74001167 | Msa1213810:intron | 25.0% |
| ! | AAGTTAGATAATCTGTTATG+TGG | - | chr8_1:74001267-74001286 | Msa1213810:intron | 25.0% |
| !! | ATCTGTTATGTGGATTATTA+TGG | - | chr8_1:74001277-74001296 | Msa1213810:intron | 25.0% |
| !! | CTTTTACGTGATTATAATAC+TGG | - | chr8_1:74001416-74001435 | Msa1213810:intron | 25.0% |
| ! | TTTACGTGATTATAATACTG+GGG | - | chr8_1:74001418-74001437 | Msa1213810:intron | 25.0% |
| ! | TTTGAAAACAAGTTTATTGC+TGG | + | chr8_1:74001510-74001529 | None:intergenic | 25.0% |
| !!! | AGCAATAAACTTGTTTTCAA+AGG | - | chr8_1:74001509-74001528 | Msa1213810:intron | 25.0% |
| !!! | CATCTATCATTTTTTGATCT+TGG | - | chr8_1:74001813-74001832 | Msa1213810:intron | 25.0% |
| ! | ATACCAATAACAACAAAGAA+TGG | + | chr8_1:74002039-74002058 | None:intergenic | 25.0% |
| ! | TAATTAGGAAACATCATCTA+GGG | + | chr8_1:74002085-74002104 | None:intergenic | 25.0% |
| ! | GGAGAAAAGACAAAAATAAT+TGG | + | chr8_1:74002236-74002255 | None:intergenic | 25.0% |
| !!! | ATCATAATTTGACTAGCTTA+AGG | - | chr8_1:74002323-74002342 | Msa1213810:CDS | 25.0% |
| ! | TTAGTATATATTGTTTAGGG+TGG | - | chr8_1:74002511-74002530 | Msa1213810:intron | 25.0% |
| !! | TAGTATATATTGTTTAGGGT+GGG | - | chr8_1:74002512-74002531 | Msa1213810:intron | 25.0% |
| ! | GCTGATGAAAATTATTGATA+TGG | - | chr8_1:74002452-74002471 | Msa1213810:five_prime_UTR | 25.0% |
| ! | TTAGAAAAGAACTTTATCGT+AGG | + | chr8_1:74002601-74002620 | None:intergenic | 25.0% |
| !!! | ATCTTAGACTTTGAGATATA+AGG | + | chr8_1:74002727-74002746 | None:intergenic | 25.0% |
| !!! | AAGTATTTTATTTGCCATAG+CGG | - | chr8_1:74002748-74002767 | Msa1213810:intron | 25.0% |
| ! | TTACAGAAAGTTAAACAACA+CGG | - | chr8_1:74002904-74002923 | Msa1213810:intron | 25.0% |
| ! | ATATGCGACTAATTAATTAG+GGG | + | chr8_1:74002966-74002985 | None:intergenic | 25.0% |
| ! | CAATATGCGACTAATTAATT+AGG | + | chr8_1:74002968-74002987 | None:intergenic | 25.0% |
| !!! | TTGTTTAGTTTGTTATGTGA+TGG | - | chr8_1:74003014-74003033 | Msa1213810:intron | 25.0% |
| !!! | TGTTTAGTTTGTTATGTGAT+GGG | - | chr8_1:74003015-74003034 | Msa1213810:intron | 25.0% |
| ! | GCTAATTACAATGAGATATA+TGG | + | chr8_1:74003520-74003539 | None:intergenic | 25.0% |
| !! | AGAAAATTGCATCTTTAGAA+GGG | + | chr8_1:74003683-74003702 | None:intergenic | 25.0% |
| ! | AAGAAAATTGCATCTTTAGA+AGG | + | chr8_1:74003684-74003703 | None:intergenic | 25.0% |
| TGGAGTAGTGATTGATTATA+GGG | + | chr8_1:73998812-73998831 | None:intergenic | 30.0% | |
| TTGGAGTAGTGATTGATTAT+AGG | + | chr8_1:73998813-73998832 | None:intergenic | 30.0% | |
| AAAAAATTGGACTATGGTGT+TGG | + | chr8_1:73998837-73998856 | None:intergenic | 30.0% | |
| !!! | ATTTTGAAATTATCGAGAGG+TGG | - | chr8_1:73999213-73999232 | Msa1213810:three_prime_UTR | 30.0% |
| TCCAAAGGAAAATTGTAGAA+CGG | + | chr8_1:73999457-73999476 | None:intergenic | 30.0% | |
| ! | AGTGATGGTGAAAAAAACAA+AGG | + | chr8_1:73999535-73999554 | None:intergenic | 30.0% |
| ! | GATACGTTTTTACTCAAAGT+GGG | + | chr8_1:73999567-73999586 | None:intergenic | 30.0% |
| ! | TGATACGTTTTTACTCAAAG+TGG | + | chr8_1:73999568-73999587 | None:intergenic | 30.0% |
| !! | TTTGTTCTCCTTTGAAATTG+AGG | - | chr8_1:73999641-73999660 | Msa1213810:CDS | 30.0% |
| TTAAGCTACTTATCCAAACA+AGG | + | chr8_1:73999794-73999813 | None:intergenic | 30.0% | |
| !!! | CTGTTTTTATGAGCTAATCT+TGG | - | chr8_1:73999927-73999946 | Msa1213810:intron | 30.0% |
| GGGTGAAATATGATTATGTA+TGG | - | chr8_1:74000203-74000222 | Msa1213810:intron | 30.0% | |
| ! | ACTTTGGTTCCATTAATCTT+GGG | + | chr8_1:74000466-74000485 | None:intergenic | 30.0% |
| ! | AACTTTGGTTCCATTAATCT+TGG | + | chr8_1:74000467-74000486 | None:intergenic | 30.0% |
| TTCTACAGATGTAGAAACTT+TGG | + | chr8_1:74000482-74000501 | None:intergenic | 30.0% | |
| TGTAGAAAACTATAAGCATG+AGG | - | chr8_1:74000495-74000514 | Msa1213810:intron | 30.0% | |
| ! | TGCTATAACAACGATTTTCT+TGG | - | chr8_1:74000588-74000607 | Msa1213810:CDS | 30.0% |
| ! | CAATTTTGCCTATACCAAAA+GGG | + | chr8_1:74000675-74000694 | None:intergenic | 30.0% |
| ! | ACAATTTTGCCTATACCAAA+AGG | + | chr8_1:74000676-74000695 | None:intergenic | 30.0% |
| TCTATCAGATCGTATGAAAT+TGG | - | chr8_1:74000727-74000746 | Msa1213810:intron | 30.0% | |
| CTTAATCATGTTAAAACTGC+GGG | - | chr8_1:74000943-74000962 | Msa1213810:intron | 30.0% | |
| TTAATCATGTTAAAACTGCG+GGG | - | chr8_1:74000944-74000963 | Msa1213810:intron | 30.0% | |
| ! | AAGTTCTTTTTGCACATTTC+AGG | + | chr8_1:74000997-74001016 | None:intergenic | 30.0% |
| AACTGCTAAATAAATGCAGA+AGG | + | chr8_1:74001205-74001224 | None:intergenic | 30.0% | |
| ATGTTGTTCATGTAGAAACT+TGG | - | chr8_1:74001354-74001373 | Msa1213810:CDS | 30.0% | |
| TGTTGTTCATGTAGAAACTT+GGG | - | chr8_1:74001355-74001374 | Msa1213810:CDS | 30.0% | |
| TTCATTACTAAGTATAAGCC+CGG | - | chr8_1:74001750-74001769 | Msa1213810:CDS | 30.0% | |
| !!! | CTATCATTTTTTGATCTTGG+TGG | - | chr8_1:74001816-74001835 | Msa1213810:intron | 30.0% |
| !!! | AGAGATAGGTTCTTATTTTG+TGG | - | chr8_1:74001921-74001940 | Msa1213810:intron | 30.0% |
| !! | TGTCCATTCTTTGTTGTTAT+TGG | - | chr8_1:74002033-74002052 | Msa1213810:CDS | 30.0% |
| CTAATTAGGAAACATCATCT+AGG | + | chr8_1:74002086-74002105 | None:intergenic | 30.0% | |
| GTTAACAATGTGAAGTACAT+TGG | - | chr8_1:74002165-74002184 | Msa1213810:CDS | 30.0% | |
| ! | TTTTGTCTTTTCTCCTTTCA+CGG | - | chr8_1:74002241-74002260 | Msa1213810:CDS | 30.0% |
| !!! | GACTAAAGACTAGGTTTTTT+TGG | + | chr8_1:74002389-74002408 | None:intergenic | 30.0% |
| ! | ATCAATAATTTTCATCAGCC+TGG | + | chr8_1:74002451-74002470 | None:intergenic | 30.0% |
| AGTTTCATTAGTGTTGTGTT+CGG | - | chr8_1:74002633-74002652 | Msa1213810:intron | 30.0% | |
| !! | TAGACTTTGAGATATAAGGT+GGG | + | chr8_1:74002723-74002742 | None:intergenic | 30.0% |
| !! | TTAGACTTTGAGATATAAGG+TGG | + | chr8_1:74002724-74002743 | None:intergenic | 30.0% |
| TGAAACATGATATAACTTGG+TGG | - | chr8_1:74002840-74002859 | Msa1213810:intron | 30.0% | |
| TATGCGACTAATTAATTAGG+GGG | + | chr8_1:74002965-74002984 | None:intergenic | 30.0% | |
| !! | TTAGTCGCATATTGATTTCT+TGG | - | chr8_1:74002974-74002993 | Msa1213810:intron | 30.0% |
| GTATACAATCACAGTTGTAT+TGG | + | chr8_1:74003759-74003778 | None:intergenic | 30.0% | |
| ATAACATGCTTAAAGGAGAA+GGG | + | chr8_1:74003836-74003855 | None:intergenic | 30.0% | |
| TATAACATGCTTAAAGGAGA+AGG | + | chr8_1:74003837-74003856 | None:intergenic | 30.0% | |
| ! | TATCTTTTAATGCCATGTCT+CGG | - | chr8_1:74003869-74003888 | Msa1213810:five_prime_UTR | 30.0% |
| AGAAATCGAGAATGAGAAGA+AGG | + | chr8_1:73998994-73999013 | None:intergenic | 35.0% | |
| ! | TTTGCGGTGTTTTCTAGATT+CGG | - | chr8_1:73999359-73999378 | Msa1213810:three_prime_UTR | 35.0% |
| ! | TCCGTTCTACAATTTTCCTT+TGG | - | chr8_1:73999453-73999472 | Msa1213810:CDS | 35.0% |
| ! | TCATTTTCTCACGTTTCCAA+AGG | + | chr8_1:73999472-73999491 | None:intergenic | 35.0% |
| GAACAAATCAAAAACGTCAC+AGG | + | chr8_1:73999628-73999647 | None:intergenic | 35.0% | |
| CTAGTGAACCTCAATTTCAA+AGG | + | chr8_1:73999652-73999671 | None:intergenic | 35.0% | |
| TAAATCTAAACATGCGTCTG+CGG | - | chr8_1:74000408-74000427 | Msa1213810:intron | 35.0% | |
| TGGTATAGGCAAAATTGTTC+AGG | - | chr8_1:74000678-74000697 | Msa1213810:intron | 35.0% | |
| ATAGGCAAAATTGTTCAGGA+TGG | - | chr8_1:74000682-74000701 | Msa1213810:intron | 35.0% | |
| ! | TGGGAGATAAAAAGTTGGTT+AGG | - | chr8_1:74000825-74000844 | Msa1213810:CDS | 35.0% |
| CATACAACAAGTGATGAGTA+TGG | + | chr8_1:74001080-74001099 | None:intergenic | 35.0% | |
| CAAAACAACTAGCAGAGAAA+TGG | + | chr8_1:74001134-74001153 | None:intergenic | 35.0% | |
| ! | TGTACCTTGTTTATCAGAGT+TGG | - | chr8_1:74001227-74001246 | Msa1213810:intron | 35.0% |
| ! | ACGACTTCATAAAAGTGTGT+AGG | + | chr8_1:74001576-74001595 | None:intergenic | 35.0% |
| ACTCTGTGATTTATATGCAC+CGG | + | chr8_1:74001772-74001791 | None:intergenic | 35.0% | |
| !!! | TCATTTTTTGATCTTGGTGG+TGG | - | chr8_1:74001819-74001838 | Msa1213810:intron | 35.0% |
| TCAAGATATTTGTCCGTGAA+AGG | + | chr8_1:74002257-74002276 | None:intergenic | 35.0% | |
| !!! | AAGACTAGGTTTTTTTGGTG+AGG | + | chr8_1:74002384-74002403 | None:intergenic | 35.0% |
| ! | AAACCTAGTCTTTAGTCTGT+TGG | - | chr8_1:74002392-74002411 | Msa1213810:CDS | 35.0% |
| ! | AACCTAGTCTTTAGTCTGTT+GGG | - | chr8_1:74002393-74002412 | Msa1213810:CDS | 35.0% |
| GTCTTTAGTCTGCAAAGTAA+GGG | - | chr8_1:74002415-74002434 | Msa1213810:CDS | 35.0% | |
| ! | TGGTAATGATACTAGAGAGA+GGG | + | chr8_1:74002545-74002564 | None:intergenic | 35.0% |
| ! | ATCTGGGATTCTTAACCAAA+GGG | - | chr8_1:74003046-74003065 | Msa1213810:intron | 35.0% |
| AAAATCAAAACACAGCCCTT+TGG | + | chr8_1:74003064-74003083 | None:intergenic | 35.0% | |
| !! | TATGACTTTGGAGTATAGGA+GGG | - | chr8_1:74003130-74003149 | Msa1213810:intron | 35.0% |
| AGCATCAGATACAGAAGTTA+GGG | + | chr8_1:74003183-74003202 | None:intergenic | 35.0% | |
| ! | ATTTGCTTCGACTTGAAGAT+GGG | - | chr8_1:74003246-74003265 | Msa1213810:intron | 35.0% |
| ACAATATCAAAGTGGTTCAC+AGG | + | chr8_1:74003311-74003330 | None:intergenic | 35.0% | |
| CCTGATTCACAATATCAAAG+TGG | + | chr8_1:74003319-74003338 | None:intergenic | 35.0% | |
| CCACTTTGATATTGTGAATC+AGG | - | chr8_1:74003316-74003335 | Msa1213810:intron | 35.0% | |
| CATGAACCATTCAAAACCTT+AGG | + | chr8_1:74003357-74003376 | None:intergenic | 35.0% | |
| !!! | CTAAGGTTTTGAATGGTTCA+TGG | - | chr8_1:74003355-74003374 | Msa1213810:intron | 35.0% |
| TTAGAACCAGTTTAACCCTA+GGG | + | chr8_1:74003402-74003421 | None:intergenic | 35.0% | |
| CCAAAGCAACACAAATTAGA+AGG | + | chr8_1:74003476-74003495 | None:intergenic | 35.0% | |
| !! | CCTTCTAATTTGTGTTGCTT+TGG | - | chr8_1:74003473-74003492 | Msa1213810:intron | 35.0% |
| ATTGTTCGCTTAAAATGGCT+AGG | - | chr8_1:74003629-74003648 | Msa1213810:intron | 35.0% | |
| ! | ATTGGACTATGGTGTTGGAT+TGG | + | chr8_1:73998832-73998851 | None:intergenic | 40.0% |
| TCAGAGGAAGAAGAAGGAAA+GGG | + | chr8_1:73998957-73998976 | None:intergenic | 40.0% | |
| ATCAGAGGAAGAAGAAGGAA+AGG | + | chr8_1:73998958-73998977 | None:intergenic | 40.0% | |
| GTGAAATCAGAGGAAGAAGA+AGG | + | chr8_1:73998963-73998982 | None:intergenic | 40.0% | |
| TCGAGAATGAGAAGAAGGAA+GGG | + | chr8_1:73998989-73999008 | None:intergenic | 40.0% | |
| ATCGAGAATGAGAAGAAGGA+AGG | + | chr8_1:73998990-73999009 | None:intergenic | 40.0% | |
| CTTTCTTCTCTTCTTCACTC+TGG | - | chr8_1:73999028-73999047 | Msa1213810:three_prime_UTR | 40.0% | |
| TAAGGTGAAGTGTAGATCAG+AGG | + | chr8_1:73999065-73999084 | None:intergenic | 40.0% | |
| AGTGGGAAAAAACTCAGTGA+TGG | + | chr8_1:73999550-73999569 | None:intergenic | 40.0% | |
| CAAGGCCTAAATGAGAGAAA+AGG | + | chr8_1:73999776-73999795 | None:intergenic | 40.0% | |
| !! | TCTCTCATTTAGGCCTTGTT+TGG | - | chr8_1:73999778-73999797 | Msa1213810:intron | 40.0% |
| GAGCGCTAACAATACTGTTT+AGG | + | chr8_1:74000015-74000034 | None:intergenic | 40.0% | |
| GCTGCATGTTAAATTGAAGC+AGG | + | chr8_1:74000266-74000285 | None:intergenic | 40.0% | |
| AGTAACAGGGAAAAAAGCAG+CGG | + | chr8_1:74000326-74000345 | None:intergenic | 40.0% | |
| GTTTAGATTTAAGCCCTCCA+AGG | + | chr8_1:74000399-74000418 | None:intergenic | 40.0% | |
| AAATCTAAACATGCGTCTGC+GGG | - | chr8_1:74000409-74000428 | Msa1213810:intron | 40.0% | |
| TGGTTCCATTAATCTTGGGA+GGG | + | chr8_1:74000462-74000481 | None:intergenic | 40.0% | |
| TTGGTTCCATTAATCTTGGG+AGG | + | chr8_1:74000463-74000482 | None:intergenic | 40.0% | |
| !! | CTGGTTGATAAAAGTCCTAG+AGG | + | chr8_1:74000542-74000561 | None:intergenic | 40.0% |
| TTATCAACCAGTTACCTGAC+TGG | - | chr8_1:74000551-74000570 | Msa1213810:intron | 40.0% | |
| ! | CTGATTGACCCTTTTGGTAT+AGG | - | chr8_1:74000664-74000683 | Msa1213810:intron | 40.0% |
| CAGATCGTATGAAATTGGTG+CGG | - | chr8_1:74000732-74000751 | Msa1213810:CDS | 40.0% | |
| GGTCTTGGGAGATAAAAAGT+TGG | - | chr8_1:74000820-74000839 | Msa1213810:CDS | 40.0% | |
| TCGTTGTGCAGAATAGATAG+TGG | - | chr8_1:74000861-74000880 | Msa1213810:CDS | 40.0% | |
| ACTTAATATGGGTAGTTGCG+CGG | - | chr8_1:74001013-74001032 | Msa1213810:intron | 40.0% | |
| TTGTTGATCGTTATCCTACG+TGG | - | chr8_1:74001046-74001065 | Msa1213810:intron | 40.0% | |
| GAAGCCAACTCTGATAAACA+AGG | + | chr8_1:74001234-74001253 | None:intergenic | 40.0% | |
| ! | GTTTATCAGAGTTGGCTTCT+TGG | - | chr8_1:74001235-74001254 | Msa1213810:intron | 40.0% |
| AGAAACTTGGGTTTCTGCAT+CGG | - | chr8_1:74001367-74001386 | Msa1213810:CDS | 40.0% | |
| AGAGAATGATTTCTACCTGG+AGG | + | chr8_1:74001459-74001478 | None:intergenic | 40.0% | |
| TCCAGGTAGAAATCATTCTC+TGG | - | chr8_1:74001458-74001477 | Msa1213810:intron | 40.0% | |
| TCCAGAGAATGATTTCTACC+TGG | + | chr8_1:74001462-74001481 | None:intergenic | 40.0% | |
| ! | AGTTTATTGCTGGCTGCAAA+AGG | + | chr8_1:74001500-74001519 | None:intergenic | 40.0% |
| ! | GGTTTTCTGAATGTGCATGA+AGG | - | chr8_1:74001530-74001549 | Msa1213810:intron | 40.0% |
| CTCTGTGATTTATATGCACC+GGG | + | chr8_1:74001771-74001790 | None:intergenic | 40.0% | |
| ! | TTTTCGTGATCGACAGTGTT+TGG | - | chr8_1:74001842-74001861 | Msa1213810:intron | 40.0% |
| TTTCGTGATCGACAGTGTTT+GGG | - | chr8_1:74001843-74001862 | Msa1213810:intron | 40.0% | |
| CAGAAAGCTGTCCAAAATTC+CGG | - | chr8_1:74001885-74001904 | Msa1213810:intron | 40.0% | |
| ! | TCTGACTTCTTCCGGAATTT+TGG | + | chr8_1:74001899-74001918 | None:intergenic | 40.0% |
| AAAATTCCGGAAGAAGTCAG+AGG | - | chr8_1:74001898-74001917 | Msa1213810:intron | 40.0% | |
| CTGTCATCTTCTTCCAGAAT+TGG | + | chr8_1:74001955-74001974 | None:intergenic | 40.0% | |
| GGAAGAAGATGACAGAAAAC+TGG | - | chr8_1:74001960-74001979 | Msa1213810:intron | 40.0% | |
| ! | TAAACTTGATGACAGCACAG+CGG | - | chr8_1:74001984-74002003 | Msa1213810:CDS | 40.0% |
| ACATCTAGATCACTCCATCT+AGG | + | chr8_1:74002135-74002154 | None:intergenic | 40.0% | |
| ACAATGTGAAGTACATTGGC+TGG | - | chr8_1:74002169-74002188 | Msa1213810:CDS | 40.0% | |
| !!! | GACTAGCTTAAGGTCTTTTG+CGG | - | chr8_1:74002333-74002352 | Msa1213810:CDS | 40.0% |
| !! | ACTAGCTTAAGGTCTTTTGC+GGG | - | chr8_1:74002334-74002353 | Msa1213810:CDS | 40.0% |
| GGTCTTTAGTCTGCAAAGTA+AGG | - | chr8_1:74002414-74002433 | Msa1213810:CDS | 40.0% | |
| ! | CTGGTAATGATACTAGAGAG+AGG | + | chr8_1:74002546-74002565 | None:intergenic | 40.0% |
| CTCTCTCTAGTATCATTACC+AGG | - | chr8_1:74002544-74002563 | Msa1213810:intron | 40.0% | |
| TCAAATGTCAATGACCGCTA+TGG | + | chr8_1:74002765-74002784 | None:intergenic | 40.0% | |
| ATTGACATTTGATGCCTCAC+AGG | - | chr8_1:74002773-74002792 | Msa1213810:intron | 40.0% | |
| ! | CATCTGGGATTCTTAACCAA+AGG | - | chr8_1:74003045-74003064 | Msa1213810:intron | 40.0% |
| ! | TGAGCTTTGTGCTATGACTT+TGG | - | chr8_1:74003118-74003137 | Msa1213810:intron | 40.0% |
| !! | GTGCTATGACTTTGGAGTAT+AGG | - | chr8_1:74003126-74003145 | Msa1213810:intron | 40.0% |
| !! | CTATGACTTTGGAGTATAGG+AGG | - | chr8_1:74003129-74003148 | Msa1213810:intron | 40.0% |
| CAGCATCAGATACAGAAGTT+AGG | + | chr8_1:74003184-74003203 | None:intergenic | 40.0% | |
| CTAACTTCTGTATCTGATGC+TGG | - | chr8_1:74003182-74003201 | Msa1213810:intron | 40.0% | |
| !! | GTTGGTAATCTAGCTCAAAG+CGG | - | chr8_1:74003206-74003225 | Msa1213810:intron | 40.0% |
| ! | CATTTGCTTCGACTTGAAGA+TGG | - | chr8_1:74003245-74003264 | Msa1213810:intron | 40.0% |
| ! | TTTGCTTCGACTTGAAGATG+GGG | - | chr8_1:74003247-74003266 | Msa1213810:intron | 40.0% |
| TCAAAGTGGTTCACAGGTTT+GGG | + | chr8_1:74003305-74003324 | None:intergenic | 40.0% | |
| ATCAAAGTGGTTCACAGGTT+TGG | + | chr8_1:74003306-74003325 | None:intergenic | 40.0% | |
| !!! | GAAGCACCTAAGGTTTTGAA+TGG | - | chr8_1:74003348-74003367 | Msa1213810:intron | 40.0% |
| !!! | GGTTTTGAATGGTTCATGGT+TGG | - | chr8_1:74003359-74003378 | Msa1213810:intron | 40.0% |
| ATCATATCAGTCTCTTCCCT+AGG | - | chr8_1:74003383-74003402 | Msa1213810:intron | 40.0% | |
| TCATATCAGTCTCTTCCCTA+GGG | - | chr8_1:74003384-74003403 | Msa1213810:intron | 40.0% | |
| GTTAGAACCAGTTTAACCCT+AGG | + | chr8_1:74003403-74003422 | None:intergenic | 40.0% | |
| ACACAAGCAAAACTCTTCAG+AGG | + | chr8_1:74003425-74003444 | None:intergenic | 40.0% | |
| !! | TGTTGCTTTGGTGCGTAAAA+GGG | - | chr8_1:74003485-74003504 | Msa1213810:intron | 40.0% |
| !! | TTTCTGGTTGCTATAGTGCT+AGG | - | chr8_1:74003586-74003605 | Msa1213810:intron | 40.0% |
| ACGTTTGCATACATACAAGC+TGG | + | chr8_1:74003783-74003802 | None:intergenic | 40.0% | |
| ! | TGTCTAGTCCACATTTTGCT+TGG | - | chr8_1:74003923-74003942 | Msa1213810:five_prime_UTR | 40.0% |
| ! | ACAAGGTACCAAGCAAAATG+TGG | + | chr8_1:74003934-74003953 | None:intergenic | 40.0% |
| ! | CATTTTGCTTGGTACCTTGT+TGG | - | chr8_1:74003934-74003953 | Msa1213810:five_prime_UTR | 40.0% |
| GAATGAGAAGAAGGAAGGGA+AGG | + | chr8_1:73998985-73999004 | None:intergenic | 45.0% | |
| CAACGAACACGATGCATCAT+TGG | + | chr8_1:73999250-73999269 | None:intergenic | 45.0% | |
| ! | ATTTTGTTGCCACCAGAGTC+CGG | + | chr8_1:74000358-74000377 | None:intergenic | 45.0% |
| GACTCTGGTGGCAACAAAAT+TGG | - | chr8_1:74000358-74000377 | Msa1213810:intron | 45.0% | |
| TCTGGTGGCAACAAAATTGG+TGG | - | chr8_1:74000361-74000380 | Msa1213810:intron | 45.0% | |
| ! | GTGGCAACAAAATTGGTGGT+GGG | - | chr8_1:74000365-74000384 | Msa1213810:intron | 45.0% |
| ! | ATTAATCTTGGGAGGGGCAT+GGG | + | chr8_1:74000455-74000474 | None:intergenic | 45.0% |
| GGTTCCATTAATCTTGGGAG+GGG | + | chr8_1:74000461-74000480 | None:intergenic | 45.0% | |
| TCTTGGCAGCTGAAAAACAG+TGG | - | chr8_1:74000605-74000624 | Msa1213810:CDS | 45.0% | |
| AACAGTGGATGATGCTCGAT+TGG | - | chr8_1:74000620-74000639 | Msa1213810:intron | 45.0% | |
| !! | GACATGCTGATTGACCCTTT+TGG | - | chr8_1:74000658-74000677 | Msa1213810:intron | 45.0% |
| TGAAATTGGTGCGGATCGAA+CGG | - | chr8_1:74000741-74000760 | Msa1213810:CDS | 45.0% | |
| GTATGGATGACTTACCACGT+AGG | + | chr8_1:74001063-74001082 | None:intergenic | 45.0% | |
| GAAACTTGGGTTTCTGCATC+GGG | - | chr8_1:74001368-74001387 | Msa1213810:CDS | 45.0% | |
| AGAATGGTATGCGTCGTGAT+TGG | - | chr8_1:74001393-74001412 | Msa1213810:intron | 45.0% | |
| ! | CGGAATTTTGGACAGCTTTC+TGG | + | chr8_1:74001887-74001906 | None:intergenic | 45.0% |
| ATCTCTCCTCTGACTTCTTC+CGG | + | chr8_1:74001907-74001926 | None:intergenic | 45.0% | |
| GAAGAAGTCAGAGGAGAGAT+AGG | - | chr8_1:74001907-74001926 | Msa1213810:intron | 45.0% | |
| TGTGGAATCTGCACCAATTC+TGG | - | chr8_1:74001939-74001958 | Msa1213810:intron | 45.0% | |
| GACATACACTTAAACCCGAG+CGG | + | chr8_1:74002017-74002036 | None:intergenic | 45.0% | |
| ! | GAAGTACATTGGCTGGATTC+TGG | - | chr8_1:74002176-74002195 | Msa1213810:CDS | 45.0% |
| GACCCAACAGACTAAAGACT+AGG | + | chr8_1:74002398-74002417 | None:intergenic | 45.0% | |
| CATTAGTGTTGTGTTCGGAG+TGG | - | chr8_1:74002638-74002657 | Msa1213810:intron | 45.0% | |
| AGTGAAGGAGCGAAATGACA+AGG | + | chr8_1:74002680-74002699 | None:intergenic | 45.0% | |
| CTCACAAGTCAATACCTGTG+AGG | + | chr8_1:74002790-74002809 | None:intergenic | 45.0% | |
| !! | TATTGACTTGTGAGCAAGCG+AGG | - | chr8_1:74002796-74002815 | Msa1213810:intron | 45.0% |
| !! | ATTGACTTGTGAGCAAGCGA+GGG | - | chr8_1:74002797-74002816 | Msa1213810:intron | 45.0% |
| !! | TGTGATGGGTTGATCACATC+TGG | - | chr8_1:74003029-74003048 | Msa1213810:intron | 45.0% |
| !! | GTGATGGGTTGATCACATCT+GGG | - | chr8_1:74003030-74003049 | Msa1213810:intron | 45.0% |
| CAGATACAGAAGTTAGGGAC+TGG | + | chr8_1:74003178-74003197 | None:intergenic | 45.0% | |
| TCTGTATCTGATGCTGGTGT+TGG | - | chr8_1:74003188-74003207 | Msa1213810:intron | 45.0% | |
| CTTCAAGTCGAAGCAAATGC+TGG | + | chr8_1:74003244-74003263 | None:intergenic | 45.0% | |
| AAGATGGGGCTGAAATTGTG+AGG | - | chr8_1:74003261-74003280 | Msa1213810:intron | 45.0% | |
| AGATGGGGCTGAAATTGTGA+GGG | - | chr8_1:74003262-74003281 | Msa1213810:intron | 45.0% | |
| TTGTGAGGGGTAGAACTAAG+TGG | - | chr8_1:74003276-74003295 | Msa1213810:intron | 45.0% | |
| ATTGTGAATCAGGTTCCAGC+AGG | - | chr8_1:74003326-74003345 | Msa1213810:intron | 45.0% | |
| TCTCTTCCCTAGGGTTAAAC+TGG | - | chr8_1:74003393-74003412 | Msa1213810:intron | 45.0% | |
| !! | GTGTTGCTTTGGTGCGTAAA+AGG | - | chr8_1:74003484-74003503 | Msa1213810:intron | 45.0% |
| ! | GTTGCTTTGGTGCGTAAAAG+GGG | - | chr8_1:74003486-74003505 | Msa1213810:intron | 45.0% |
| ! | TTGCTTTGGTGCGTAAAAGG+GGG | - | chr8_1:74003487-74003506 | Msa1213810:intron | 45.0% |
| GAGAGATAGAGTAGTAGAGC+AGG | + | chr8_1:74003544-74003563 | None:intergenic | 45.0% | |
| ATGTATGCAAACGTCCCACA+TGG | - | chr8_1:74003789-74003808 | Msa1213810:five_prime_UTR | 45.0% | |
| TGTATGCAAACGTCCCACAT+GGG | - | chr8_1:74003790-74003809 | Msa1213810:five_prime_UTR | 45.0% | |
| ACGTCCCACATGGGAATTAT+TGG | - | chr8_1:74003799-74003818 | Msa1213810:five_prime_UTR | 45.0% | |
| CGTCCCACATGGGAATTATT+GGG | - | chr8_1:74003800-74003819 | Msa1213810:five_prime_UTR | 45.0% | |
| GCACCCAATAATTCCCATGT+GGG | + | chr8_1:74003806-74003825 | None:intergenic | 45.0% | |
| TGCACCCAATAATTCCCATG+TGG | + | chr8_1:74003807-74003826 | None:intergenic | 45.0% | |
| TGCCATGTCTCGGATATATG+TGG | - | chr8_1:74003879-74003898 | Msa1213810:five_prime_UTR | 45.0% | |
| GCCATGTCTCGGATATATGT+GGG | - | chr8_1:74003880-74003899 | Msa1213810:five_prime_UTR | 45.0% | |
| CCATGTCTCGGATATATGTG+GGG | - | chr8_1:74003881-74003900 | Msa1213810:five_prime_UTR | 45.0% | |
| CATGTCTCGGATATATGTGG+GGG | - | chr8_1:74003882-74003901 | Msa1213810:five_prime_UTR | 45.0% | |
| GGAAGGGAAGGTGAAATCAG+AGG | + | chr8_1:73998973-73998992 | None:intergenic | 50.0% | |
| TTGCGAGCTTCGATCTCTGA+AGG | + | chr8_1:73999110-73999129 | None:intergenic | 50.0% | |
| CCGGCAAGGATGAAGTAACA+GGG | + | chr8_1:74000339-74000358 | None:intergenic | 50.0% | |
| ! | CCCTGTTACTTCATCCTTGC+CGG | - | chr8_1:74000336-74000355 | Msa1213810:intron | 50.0% |
| TCCGGCAAGGATGAAGTAAC+AGG | + | chr8_1:74000340-74000359 | None:intergenic | 50.0% | |
| GGTGGCAACAAAATTGGTGG+TGG | - | chr8_1:74000364-74000383 | Msa1213810:intron | 50.0% | |
| CATTAATCTTGGGAGGGGCA+TGG | + | chr8_1:74000456-74000475 | None:intergenic | 50.0% | |
| CATGCCCCTCCCAAGATTAA+TGG | - | chr8_1:74000454-74000473 | Msa1213810:intron | 50.0% | |
| TGCTCGATTGGAAGCCAAGA+CGG | - | chr8_1:74000632-74000651 | Msa1213810:intron | 50.0% | |
| ATCAGCATGTCAGACCGTCT+TGG | + | chr8_1:74000649-74000668 | None:intergenic | 50.0% | |
| GTTAAAACTGCGGGGCTTCT+TGG | - | chr8_1:74000952-74000971 | Msa1213810:intron | 50.0% | |
| GTTTCTGCATCGGGCAAGAA+TGG | - | chr8_1:74001377-74001396 | Msa1213810:CDS | 50.0% | |
| AAATCTTGACGAGAGCCTCC+AGG | - | chr8_1:74001441-74001460 | Msa1213810:intron | 50.0% | |
| !! | CACAGCGGATTATATCCGCT+CGG | - | chr8_1:74001999-74002018 | Msa1213810:CDS | 50.0% |
| !! | ACAGCGGATTATATCCGCTC+GGG | - | chr8_1:74002000-74002019 | Msa1213810:CDS | 50.0% |
| GTCTGTGCTTTCAGCCTAGA+TGG | - | chr8_1:74002118-74002137 | Msa1213810:CDS | 50.0% | |
| ! | GTACATTGGCTGGATTCTGG+AGG | - | chr8_1:74002179-74002198 | Msa1213810:CDS | 50.0% |
| ! | AGTAAGGGTGTGCTCTTGTG+AGG | - | chr8_1:74002430-74002449 | Msa1213810:CDS | 50.0% |
| GAGCGAAATGACAAGGACAG+AGG | + | chr8_1:74002673-74002692 | None:intergenic | 50.0% | |
| TAAGGTGGGCCTCATTGTTG+AGG | + | chr8_1:74002709-74002728 | None:intergenic | 50.0% | |
| TGACTCTCGAGGATTGACTG+TGG | + | chr8_1:74003098-74003117 | None:intergenic | 50.0% | |
| CACAAAGCTCATGACTCTCG+AGG | + | chr8_1:74003109-74003128 | None:intergenic | 50.0% | |
| TTGGAGTATAGGAGGGAGTG+TGG | - | chr8_1:74003137-74003156 | Msa1213810:intron | 50.0% | |
| ! | GTAATCTAGCTCAAAGCGGC+CGG | - | chr8_1:74003210-74003229 | Msa1213810:intron | 50.0% |
| GCAAATGCTGGCACTCAATC+CGG | + | chr8_1:74003232-74003251 | None:intergenic | 50.0% | |
| GATGGGGCTGAAATTGTGAG+GGG | - | chr8_1:74003263-74003282 | Msa1213810:intron | 50.0% | |
| TGAGGGGTAGAACTAAGTGG+AGG | - | chr8_1:74003279-74003298 | Msa1213810:intron | 50.0% | |
| AAACCTTAGGTGCTTCCTGC+TGG | + | chr8_1:74003344-74003363 | None:intergenic | 50.0% | |
| ! | TGCTTTGGTGCGTAAAAGGG+GGG | - | chr8_1:74003488-74003507 | Msa1213810:intron | 50.0% |
| TGGTTGCTATAGTGCTAGGC+TGG | - | chr8_1:74003590-74003609 | Msa1213810:intron | 50.0% | |
| CCCCACATATATCCGAGACA+TGG | + | chr8_1:74003884-74003903 | None:intergenic | 50.0% | |
| AGGGAAAAAAGCAGCGGCAG+TGG | + | chr8_1:74000320-74000339 | None:intergenic | 55.0% | |
| ACTTCATCCTTGCCGGACTC+TGG | - | chr8_1:74000343-74000362 | Msa1213810:intron | 55.0% | |
| GTGGGAATGCGAACCTTGGA+GGG | - | chr8_1:74000383-74000402 | Msa1213810:intron | 55.0% | |
| GTCTGCGGGCTTGCAAGTAA+AGG | - | chr8_1:74000423-74000442 | Msa1213810:intron | 55.0% | |
| GTCCTAGAGGATTGCGACGA+CGG | + | chr8_1:74000529-74000548 | None:intergenic | 55.0% | |
| GCATGCTCCAGTCAGGTAAC+TGG | + | chr8_1:74000561-74000580 | None:intergenic | 55.0% | |
| ! | GCAAGAAGCATGCTCCAGTC+AGG | + | chr8_1:74000568-74000587 | None:intergenic | 55.0% |
| !! | GGGCTTCTTGGTGATGGCTT+TGG | - | chr8_1:74000964-74000983 | Msa1213810:intron | 55.0% |
| TTGTTGAGGTGGGGGAGTGA+AGG | + | chr8_1:74002695-74002714 | None:intergenic | 55.0% | |
| ACTCCCCCACCTCAACAATG+AGG | - | chr8_1:74002697-74002716 | Msa1213810:intron | 55.0% | |
| TGGGCCTCATTGTTGAGGTG+GGG | + | chr8_1:74002704-74002723 | None:intergenic | 55.0% | |
| GTGGGCCTCATTGTTGAGGT+GGG | + | chr8_1:74002705-74002724 | None:intergenic | 55.0% | |
| ! | GTATAGGAGGGAGTGTGGCA+AGG | - | chr8_1:74003142-74003161 | Msa1213810:intron | 55.0% |
| !! | GTTCCAGCAGGAAGCACCTA+AGG | - | chr8_1:74003338-74003357 | Msa1213810:intron | 55.0% |
| TCATCCTTGCCGGACTCTGG+TGG | - | chr8_1:74000346-74000365 | Msa1213810:intron | 60.0% | |
| !! | GGTGGTGGGAATGCGAACCT+TGG | - | chr8_1:74000379-74000398 | Msa1213810:intron | 60.0% |
| GGTGGGAATGCGAACCTTGG+AGG | - | chr8_1:74000382-74000401 | Msa1213810:intron | 60.0% | |
| TGCCGTCGTCGCAATCCTCT+AGG | - | chr8_1:74000524-74000543 | Msa1213810:intron | 60.0% | |
| ACTGCGGGGCTTCTTGGTGA+TGG | - | chr8_1:74000958-74000977 | Msa1213810:intron | 60.0% | |
| GGGCCTCATTGTTGAGGTGG+GGG | + | chr8_1:74002703-74002722 | None:intergenic | 60.0% | |
| GGTGGGCCTCATTGTTGAGG+TGG | + | chr8_1:74002706-74002725 | None:intergenic | 60.0% | |
| GTTGCCACCAGAGTCCGGCA+AGG | + | chr8_1:74000353-74000372 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 73998801 | 74003959 | 73998801 | ID=Msa1213810;Name=Msa1213810 |
| chr8_1 | mRNA | 73998801 | 74003959 | 73998801 | ID=Msa1213810-mRNA-1;Parent=Msa1213810;Name=Msa1213810-mRNA-1;_AED=0.08;_eAED=0.08;_QI=274|1|1|1|0.83|0.71|7|601|414 |
| chr8_1 | exon | 73998801 | 73999671 | 73998801 | ID=Msa1213810-mRNA-1:exon:25348;Parent=Msa1213810-mRNA-1 |
| chr8_1 | exon | 74000560 | 74000628 | 74000560 | ID=Msa1213810-mRNA-1:exon:25347;Parent=Msa1213810-mRNA-1 |
| chr8_1 | exon | 74000731 | 74000902 | 74000731 | ID=Msa1213810-mRNA-1:exon:25346;Parent=Msa1213810-mRNA-1 |
| chr8_1 | exon | 74001298 | 74001411 | 74001298 | ID=Msa1213810-mRNA-1:exon:25345;Parent=Msa1213810-mRNA-1 |
| chr8_1 | exon | 74001693 | 74001826 | 74001693 | ID=Msa1213810-mRNA-1:exon:25344;Parent=Msa1213810-mRNA-1 |
| chr8_1 | exon | 74001965 | 74002475 | 74001965 | ID=Msa1213810-mRNA-1:exon:25343;Parent=Msa1213810-mRNA-1 |
| chr8_1 | exon | 74003711 | 74003959 | 74003711 | ID=Msa1213810-mRNA-1:exon:25342;Parent=Msa1213810-mRNA-1 |
| chr8_1 | five_prime_UTR | 74003711 | 74003959 | 74003711 | ID=Msa1213810-mRNA-1:five_prime_utr;Parent=Msa1213810-mRNA-1 |
| chr8_1 | five_prime_UTR | 74002451 | 74002475 | 74002451 | ID=Msa1213810-mRNA-1:five_prime_utr;Parent=Msa1213810-mRNA-1 |
| chr8_1 | CDS | 74001965 | 74002450 | 74001965 | ID=Msa1213810-mRNA-1:cds;Parent=Msa1213810-mRNA-1 |
| chr8_1 | CDS | 74001693 | 74001826 | 74001693 | ID=Msa1213810-mRNA-1:cds;Parent=Msa1213810-mRNA-1 |
| chr8_1 | CDS | 74001298 | 74001411 | 74001298 | ID=Msa1213810-mRNA-1:cds;Parent=Msa1213810-mRNA-1 |
| chr8_1 | CDS | 74000731 | 74000902 | 74000731 | ID=Msa1213810-mRNA-1:cds;Parent=Msa1213810-mRNA-1 |
| chr8_1 | CDS | 74000560 | 74000628 | 74000560 | ID=Msa1213810-mRNA-1:cds;Parent=Msa1213810-mRNA-1 |
| chr8_1 | CDS | 73999402 | 73999671 | 73999402 | ID=Msa1213810-mRNA-1:cds;Parent=Msa1213810-mRNA-1 |
| chr8_1 | three_prime_UTR | 73998801 | 73999401 | 73998801 | ID=Msa1213810-mRNA-1:three_prime_utr;Parent=Msa1213810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
