AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1416260

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1416260 MtrunA17_Chr5g0442391 98.077 572 11 0 1 572 1 572 0.0 1154
Msa1416260 MtrunA17_Chr3g0095501 76.420 581 128 5 1 572 1 581 0.0 872
Msa1416260 MtrunA17_Chr1g0183051 47.400 500 258 3 53 549 7 504 5.05e-163 474
Msa1416260 MtrunA17_Chr3g0095471 56.747 289 110 5 1 282 1 281 2.39e-88 275
Msa1416260 MtrunA17_Chr1g0185501 29.900 301 202 7 253 548 16 312 9.61e-39 144
Msa1416260 MtrunA17_Chr4g0067151 26.948 308 211 7 253 548 16 321 1.94e-29 119
Msa1416260 MtrunA17_Chr4g0067151 27.536 138 96 2 250 384 148 284 2.04e-11 65.5
Msa1416260 MtrunA17_Chr8g0383711 24.242 297 220 5 252 548 6 297 4.77e-24 102
Msa1416260 MtrunA17_Chr7g0253861 22.742 299 219 8 257 547 48 342 2.84e-19 89.4
Msa1416260 MtrunA17_Chr5g0401661 25.305 328 200 10 257 551 328 643 4.35e-17 85.1
Msa1416260 MtrunA17_Chr5g0401661 27.011 174 113 4 257 420 513 682 8.23e-13 71.2
Msa1416260 MtrunA17_Chr1g0176241 27.124 306 185 13 263 552 160 443 1.20e-16 82.8
Msa1416260 MtrunA17_Chr5g0401671 25.382 327 199 10 257 551 240 553 1.25e-16 83.2
Msa1416260 MtrunA17_Chr5g0401671 27.011 174 113 4 257 420 423 592 6.13e-12 68.6
Msa1416260 MtrunA17_Chr5g0401671 23.305 236 153 8 343 559 240 466 1.92e-11 67.0
Msa1416260 MtrunA17_Chr3g0136971 31.214 173 111 5 263 431 460 628 1.90e-16 82.8
Msa1416260 MtrunA17_Chr4g0053651 24.159 327 211 8 252 550 218 535 4.02e-15 78.6
Msa1416260 MtrunA17_Chr4g0053651 28.161 174 111 5 257 420 406 575 7.87e-11 64.7
Msa1416260 MtrunA17_Chr5g0405851 28.095 210 142 6 226 430 255 460 6.28e-14 74.3
Msa1416260 MtrunA17_Chr3g0103361 24.390 287 202 9 263 543 18 295 8.17e-13 69.7
Msa1416260 MtrunA17_Chr4g0057141 21.338 314 234 8 243 548 336 644 8.53e-13 71.2
Msa1416260 MtrunA17_Chr1g0185891 21.338 314 234 8 243 548 275 583 1.14e-12 70.9
Msa1416260 MtrunA17_Chr8g0352821 22.222 297 178 10 259 551 220 467 1.40e-12 70.5
Msa1416260 MtrunA17_Chr7g0266251 23.659 317 179 8 261 552 66 344 1.80e-12 68.9
Msa1416260 MtrunA17_Chr6g0448921 25.000 160 116 3 250 408 87 243 2.98e-12 69.7
Msa1416260 MtrunA17_Chr3g0099061 22.911 371 243 16 208 548 154 511 5.73e-12 68.2
Msa1416260 MtrunA17_Chr1g0172501 29.240 171 114 5 263 430 397 563 1.16e-11 67.4
Msa1416260 MtrunA17_Chr3g0116561 21.908 283 170 9 270 548 273 508 2.09e-11 66.6
Msa1416260 MtrunA17_Chr3g0093681 29.240 171 114 5 263 430 397 563 2.21e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1416260 AT5G08560.1 59.661 590 216 8 1 570 1 588 0.0 714
Msa1416260 AT5G08560.2 59.661 590 216 8 1 570 1 588 0.0 714
Msa1416260 AT5G08560.3 59.661 590 216 8 1 570 1 588 0.0 714
Msa1416260 AT5G43920.1 48.544 515 252 6 53 555 7 520 1.56e-165 481
Msa1416260 AT4G02730.1 32.013 303 194 10 253 548 32 329 2.76e-34 133
Msa1416260 AT3G49660.1 26.974 304 214 5 251 548 11 312 4.23e-30 120
Msa1416260 AT3G49660.1 31.159 138 91 2 250 384 141 277 7.43e-14 73.2
Msa1416260 AT2G43770.1 24.415 299 214 8 257 547 46 340 2.08e-23 102
Msa1416260 AT5G64730.1 24.916 297 218 5 252 548 6 297 1.32e-22 99.0
Msa1416260 AT5G56130.1 25.472 318 211 12 252 552 6 314 1.85e-17 84.0
Msa1416260 AT5G25150.1 36.441 118 71 2 263 379 459 573 3.10e-17 85.9
Msa1416260 AT5G25150.2 36.441 118 71 2 263 379 459 573 3.39e-17 85.5
Msa1416260 AT5G67320.1 24.169 331 206 11 252 550 253 570 9.40e-15 77.8
Msa1416260 AT1G71840.1 21.725 313 199 7 256 565 62 331 7.31e-14 74.3
Msa1416260 AT3G27640.1 24.567 289 171 9 306 550 126 411 3.60e-13 72.8
Msa1416260 AT3G27640.2 24.567 289 171 9 306 550 107 392 4.69e-13 72.0
Msa1416260 AT1G10580.1 22.186 311 229 8 246 548 267 572 7.38e-13 71.6
Msa1416260 AT5G13480.2 21.886 297 179 10 259 551 171 418 1.08e-12 71.2
Msa1416260 AT5G52820.1 23.121 346 208 11 250 548 137 471 1.36e-12 70.5
Msa1416260 AT5G52820.1 26.056 142 104 1 279 420 332 472 5.61e-11 65.5
Msa1416260 AT5G13480.4 21.886 297 179 10 259 551 148 395 1.38e-12 70.9
Msa1416260 AT5G13480.3 21.886 297 179 10 259 551 148 395 1.41e-12 70.9
Msa1416260 AT5G13480.1 21.886 297 179 10 259 551 160 407 1.57e-12 70.9
Msa1416260 AT2G41500.1 22.143 280 166 7 272 548 263 493 2.24e-12 70.1
Msa1416260 AT2G41500.1 26.818 220 141 6 232 435 335 550 6.45e-12 68.6
Msa1416260 AT2G41500.2 22.143 280 166 7 272 548 263 493 2.24e-12 70.1
Msa1416260 AT2G41500.2 26.818 220 141 6 232 435 335 550 6.45e-12 68.6
Msa1416260 AT5G16750.1 30.189 159 101 6 400 554 27 179 5.53e-12 69.3
Msa1416260 AT1G73720.1 20.152 526 361 21 61 548 5 509 4.11e-11 65.9
Msa1416260 AT2G32700.7 22.615 283 199 11 272 548 537 805 8.59e-11 65.5
Msa1416260 AT2G32700.2 22.615 283 199 11 272 548 518 786 9.66e-11 65.1
Msa1416260 AT2G32700.5 22.615 283 199 11 272 548 518 786 9.66e-11 65.1
Msa1416260 AT2G32700.1 22.615 283 199 11 272 548 518 786 9.66e-11 65.1
Msa1416260 AT2G32700.4 22.615 283 199 11 272 548 518 786 9.66e-11 65.1
Msa1416260 AT2G32700.3 22.615 283 199 11 272 548 518 786 9.66e-11 65.1
Msa1416260 AT2G32700.6 22.615 283 199 11 272 548 516 784 9.99e-11 65.1

Find 178 sgRNAs with CRISPR-Local

Find 358 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTCCAAAGATTAATTTCT+TGG 0.164363 tig0024335:+30035 None:intergenic
CTGTTAAGATTATTAATATA+TGG 0.167131 tig0024335:-33414 Msa1416260:five_prime_UTR
AAATTCTTTGAACTTCTAAA+TGG 0.177095 tig0024335:-32957 Msa1416260:CDS
ATCGCTTAAGATTTCTGATT+TGG 0.214294 tig0024335:-30221 Msa1416260:CDS
AACCCATTTCTTCTGTTTCA+TGG 0.245339 tig0024335:-30468 Msa1416260:CDS
AAACAGAAGAAATGGGTTTC+TGG 0.247488 tig0024335:+30473 None:intergenic
AGCCCTTACCTTGCAGTTAG+AGG 0.290376 tig0024335:-32712 Msa1416260:CDS
AACAAGTACTTGATGGGAAT+TGG 0.300522 tig0024335:-33064 Msa1416260:CDS
TTGAACAGCAATACTGTATT+GGG 0.302367 tig0024335:+30157 None:intergenic
ATGACCGTACAATTCGGATA+TGG 0.302803 tig0024335:-29420 Msa1416260:CDS
TGAACCAAGAAATTAATCTT+TGG 0.323203 tig0024335:-30039 Msa1416260:CDS
TCATTCGAGTAATAAGAATA+AGG 0.330366 tig0024335:-34180 Msa1416260:five_prime_UTR
GGCGCTCGAGGTTTATTATA+AGG 0.334980 tig0024335:-29970 Msa1416260:CDS
GCAGGGATAGTAGTAGAATT+CGG 0.341628 tig0024335:-32881 Msa1416260:CDS
ATTGAACAGCAATACTGTAT+TGG 0.342346 tig0024335:+30156 None:intergenic
AGGAGATTACTCCACTTTGC+AGG 0.342931 tig0024335:-32899 Msa1416260:CDS
GAGGCACTGCCTGGTCATTC+AGG 0.344214 tig0024335:-29502 Msa1416260:CDS
CAATTGCAATGATAATAAAA+AGG 0.346452 tig0024335:+29296 None:intergenic
GTCGGCCGCGTGTTTGATAT+TGG 0.346912 tig0024335:-32985 Msa1416260:CDS
ATGATCAAACTGCAATCATC+TGG 0.349518 tig0024335:-30807 Msa1416260:CDS
AGTGGGAAACATATACTTTC+TGG 0.350799 tig0024335:-30313 Msa1416260:CDS
CTGGCTTAGTCTCCTGTACA+TGG 0.354065 tig0024335:-30342 Msa1416260:CDS
GATTTCTGATTTGGATATAA+CGG 0.356904 tig0024335:-30212 Msa1416260:CDS
TTTCTTGATTATTATTCTAC+TGG 0.356996 tig0024335:+34282 None:intergenic
ACTCCATGAAACAGAAGAAA+TGG 0.360475 tig0024335:+30465 None:intergenic
TAAAGAGAGACGAGTTTGTT+AGG 0.364649 tig0024335:-33193 Msa1416260:CDS
TGAAAAGAGGTTGGAACATC+TGG 0.366917 tig0024335:-32742 Msa1416260:CDS
ATTTGCATGTGGGAATTAGA+TGG 0.371375 tig0024335:-30274 Msa1416260:CDS
CTAACCTGTACTGTTCTAGA+TGG 0.373437 tig0024335:+32618 None:intergenic
ATAATGTCTCAGGAATTAAA+AGG 0.377105 tig0024335:+29167 None:intergenic
GAGTAATAAGAATAAGGTTT+GGG 0.377781 tig0024335:-34174 Msa1416260:five_prime_UTR
AATTCTTTGAACTTCTAAAT+GGG 0.379699 tig0024335:-32956 Msa1416260:CDS
GTCTCTCTTTATAACCCCTT+TGG 0.381651 tig0024335:+33205 None:intergenic
GTGAGGAGCTCTTCGTCATT+AGG 0.382343 tig0024335:+30442 None:intergenic
CAGGGATAGTAGTAGAATTC+GGG 0.384222 tig0024335:-32880 Msa1416260:CDS
TTAATGATAAGTGTATATAT+TGG 0.386133 tig0024335:-29138 Msa1416260:three_prime_UTR
CGAGTAATAAGAATAAGGTT+TGG 0.389657 tig0024335:-34175 Msa1416260:five_prime_UTR
TTTGAAACGTATGAAGGTTT+CGG 0.391023 tig0024335:-33345 Msa1416260:CDS
GCAGATATTGTGTTCCTTTG+AGG 0.393339 tig0024335:-33490 Msa1416260:intron
CTTCTTTGTAGGTCTACATA+TGG 0.393962 tig0024335:-29549 Msa1416260:intron
TGTTAAGATTATTAATATAT+GGG 0.403593 tig0024335:-33413 Msa1416260:five_prime_UTR
ATTATAAGGTCTTGCTTTGG+TGG 0.406114 tig0024335:-29956 Msa1416260:CDS
GTGGAGTGGAGGAATCTATT+AGG 0.413571 tig0024335:-30417 Msa1416260:CDS
GCGCGGCTAGAGGAGGAGTC+TGG 0.418206 tig0024335:-33125 Msa1416260:CDS
ATAAATTTGGAGACACTTGC+CGG 0.419366 tig0024335:+30378 None:intergenic
TTTATTATAAGGTCTTGCTT+TGG 0.419821 tig0024335:-29959 Msa1416260:CDS
GCTAACATGTGGGGATTAGC+TGG 0.424867 tig0024335:+29454 None:intergenic
TTTACGCAACAAGTACTTGA+TGG 0.428247 tig0024335:-33071 Msa1416260:CDS
AATTAGTTGGATTGTCGAAC+GGG 0.431277 tig0024335:-33316 Msa1416260:CDS
TTGTACTTCCCAATGAGCTT+AGG 0.432048 tig0024335:+30001 None:intergenic
CGTGTAAAGCATAGATTATC+TGG 0.433494 tig0024335:-30499 Msa1416260:CDS
GTAGCTACATTGCGTAAGAT+TGG 0.437473 tig0024335:-33032 Msa1416260:CDS
ACCGTCCGAAGGGGACGATC+AGG 0.440225 tig0024335:-33237 Msa1416260:CDS
ACCTTCATACGTTTCAAAGC+TGG 0.443185 tig0024335:+33350 None:intergenic
TACATATGGCACCGAAGCTC+AGG 0.443665 tig0024335:-29535 Msa1416260:CDS
TTGCCCATTTCACAACTCAT+TGG 0.447546 tig0024335:-32688 Msa1416260:CDS
TGATCCAATGAGTTGTGAAA+TGG 0.449737 tig0024335:+32684 None:intergenic
TGACCGTACAATTCGGATAT+GGG 0.450477 tig0024335:-29419 Msa1416260:CDS
GTTTCGGCGAAAGAATTAGT+TGG 0.451790 tig0024335:-33329 Msa1416260:CDS
ATTAATCTTTGGAATATTGA+AGG 0.452243 tig0024335:-30028 Msa1416260:CDS
ACCTTTACAATATCTTGCTT+AGG 0.458978 tig0024335:+32828 None:intergenic
ACAAGTACTTGATGGGAATT+GGG 0.460130 tig0024335:-33063 Msa1416260:CDS
GAAGGCGATCCTAAGCTCAT+TGG 0.460407 tig0024335:-30010 Msa1416260:CDS
ATGGGAAAGAAGTGGAGTCT+TGG 0.463584 tig0024335:-30255 Msa1416260:CDS
AAGTTCCTCCATTGCAGTAA+TGG 0.463877 tig0024335:+29347 None:intergenic
AAGAGAGAAATGATCGGAAT+CGG 0.466798 tig0024335:+34021 None:intergenic
AAGCCTCTAACTGCAAGGTA+AGG 0.469272 tig0024335:+32709 None:intergenic
CTATCGGCTCTCCTGAGCTT+CGG 0.473900 tig0024335:+29524 None:intergenic
AAGGCGATCCTAAGCTCATT+GGG 0.475240 tig0024335:-30009 Msa1416260:CDS
GGAGGAATCTATTAGGCGTT+GGG 0.480100 tig0024335:-30410 Msa1416260:CDS
CCAGTGATGACCGTACAATT+CGG 0.481345 tig0024335:-29426 Msa1416260:CDS
ACCAGCTTTGAAACGTATGA+AGG 0.489309 tig0024335:-33351 Msa1416260:CDS
TTCCATGAGTCTAATTCACT+TGG 0.493155 tig0024335:+29100 None:intergenic
TTGGGAAGTACAAAGGTCAT+AGG 0.494292 tig0024335:-29991 Msa1416260:CDS
GGAATACCTTTGCACTCACC+TGG 0.496485 tig0024335:-33104 Msa1416260:CDS
ACAATATCTTGCTTAGGAGA+TGG 0.500640 tig0024335:+32834 None:intergenic
ATTTGGATATAACGGCTGAC+GGG 0.500965 tig0024335:-30204 Msa1416260:CDS
TCAGGTATCATCACTGTTGG+AGG 0.502498 tig0024335:+32762 None:intergenic
GCAAAGGCATTGTATTCGCT+TGG 0.504088 tig0024335:-33164 Msa1416260:CDS
TCACTTGAGAAACTTCCAAC+AGG 0.504215 tig0024335:+33278 None:intergenic
ATGATCGGAATCGGAGTTTG+AGG 0.506112 tig0024335:+34030 None:intergenic
CCGAATTGTACGGTCATCAC+TGG 0.507746 tig0024335:+29426 None:intergenic
ATCAGGTTGTCGGTTCCAAA+GGG 0.509238 tig0024335:-33220 Msa1416260:CDS
AGGCGTTGGGATGTTTCTAC+CGG 0.511324 tig0024335:-30397 Msa1416260:CDS
TGGAGGAATCTATTAGGCGT+TGG 0.513191 tig0024335:-30411 Msa1416260:CDS
GACAACCTGATCGTCCCCTT+CGG 0.518549 tig0024335:+33232 None:intergenic
CTCCATGAAACAGAAGAAAT+GGG 0.519066 tig0024335:+30466 None:intergenic
GATCCAATGAGTTGTGAAAT+GGG 0.522742 tig0024335:+32685 None:intergenic
GATCAGGTTGTCGGTTCCAA+AGG 0.527948 tig0024335:-33221 Msa1416260:CDS
TTACGCAACAAGTACTTGAT+GGG 0.533338 tig0024335:-33070 Msa1416260:CDS
AAGTTTCTCAAGTGACTCCA+TGG 0.534561 tig0024335:-33270 Msa1416260:CDS
GAAAGTATATGTTTCCCACT+TGG 0.535435 tig0024335:+30316 None:intergenic
GGAAGCATTGAAGACCTTGA+GGG 0.536828 tig0024335:-32922 Msa1416260:CDS
GAAGGGGACGATCAGGTTGT+CGG 0.536973 tig0024335:-33230 Msa1416260:CDS
ATTCTTTGAACTTCTAAATG+GGG 0.538918 tig0024335:-32955 Msa1416260:CDS
AAGCTCAGGAGAGCCGATAG+AGG 0.539387 tig0024335:-29521 Msa1416260:CDS
TGACAGATGACACTATTGTC+AGG 0.541344 tig0024335:-33007 Msa1416260:CDS
TTTGCATGTGGGAATTAGAT+GGG 0.543867 tig0024335:-30273 Msa1416260:CDS
CAGTGATGATACCTGAAAAG+AGG 0.546109 tig0024335:-32755 Msa1416260:CDS
GATTATTAATATATGGGCTG+AGG 0.546954 tig0024335:-33407 Msa1416260:five_prime_UTR
TTCTTTGAACTTCTAAATGG+GGG 0.550524 tig0024335:-32954 Msa1416260:CDS
CTCGGCTACTACCGTCCGAA+GGG 0.555270 tig0024335:-33247 Msa1416260:CDS
GATTTGGATATAACGGCTGA+CGG 0.556339 tig0024335:-30205 Msa1416260:CDS
GATGATACCTGAAAAGAGGT+TGG 0.556463 tig0024335:-32751 Msa1416260:CDS
GAGTGGGGCGCGGCTAGAGG+AGG 0.557951 tig0024335:-33132 Msa1416260:CDS
AAAGAGTGGGGCGCGGCTAG+AGG 0.558493 tig0024335:-33135 Msa1416260:CDS
GGACGGTAGTAGCCGAGCCA+TGG 0.559268 tig0024335:+33253 None:intergenic
CCTGTACATGGTTTCCAAGT+GGG 0.561775 tig0024335:-30330 Msa1416260:CDS
GGAGATTACTCCACTTTGCA+GGG 0.564765 tig0024335:-32898 Msa1416260:CDS
TCGCTTGGTTATAGAAAGAG+TGG 0.565963 tig0024335:-33149 Msa1416260:CDS
GAATTAGTTGGATTGTCGAA+CGG 0.567473 tig0024335:-33317 Msa1416260:CDS
GAGCAAGCTTTCGTTGCAAG+TGG 0.568125 tig0024335:-29929 Msa1416260:CDS
AAACACATGATGATGAGGTA+TGG 0.568303 tig0024335:-30876 Msa1416260:CDS
AAGTGGAAGTGAGGATTCAC+AGG 0.569174 tig0024335:-29912 Msa1416260:intron
GAGCCGATAGAGGCACTGCC+TGG 0.571510 tig0024335:-29511 Msa1416260:CDS
GTGATAAGAGCATTTGCATG+TGG 0.571565 tig0024335:-30285 Msa1416260:CDS
CCCACTTGGAAACCATGTAC+AGG 0.572154 tig0024335:+30330 None:intergenic
GCTCGGCTACTACCGTCCGA+AGG 0.572516 tig0024335:-33248 Msa1416260:CDS
TGATCAAACTGCAATCATCT+GGG 0.573879 tig0024335:-30806 Msa1416260:CDS
AGCCTCTAACTGCAAGGTAA+GGG 0.576761 tig0024335:+32710 None:intergenic
TCCTAAGCAAGATATTGTAA+AGG 0.577339 tig0024335:-32829 Msa1416260:CDS
GTTTGTTAGGATAATTGCAA+AGG 0.580074 tig0024335:-33180 Msa1416260:CDS
ACTGGCAGAGGCTAACATGT+GGG 0.581947 tig0024335:+29444 None:intergenic
GATACCATCTAGAACAGTAC+AGG 0.582230 tig0024335:-32622 Msa1416260:intron
TGGAGTAATCTCCTCCCTCA+AGG 0.585707 tig0024335:+32908 None:intergenic
TCTTCTTCTAAAGAGCCTGT+TGG 0.587005 tig0024335:-33293 Msa1416260:CDS
ATAAAGAAACAAAGGATGAG+AGG 0.587569 tig0024335:-30135 Msa1416260:CDS
AGCCAAGTGAATTAGACTCA+TGG 0.587645 tig0024335:-29102 Msa1416260:three_prime_UTR
GGCATCCATTACTGCAATGG+AGG 0.591892 tig0024335:-29352 Msa1416260:CDS
GGAATTAGATGGGAAAGAAG+TGG 0.592587 tig0024335:-30263 Msa1416260:CDS
TTTCGTTGCAAGTGGAAGTG+AGG 0.593078 tig0024335:-29921 Msa1416260:CDS
CGCTTGGTTATAGAAAGAGT+GGG 0.593369 tig0024335:-33148 Msa1416260:CDS
TGTACGGTCATCACTGGCAG+AGG 0.595492 tig0024335:+29432 None:intergenic
GCTGTTCAATAAAGAAACAA+AGG 0.597283 tig0024335:-30143 Msa1416260:CDS
GACGAAGAGCTCCTCACATG+TGG 0.597893 tig0024335:-30436 Msa1416260:CDS
AAAAGAAAGAGAGAAATGAT+CGG 0.598904 tig0024335:+34015 None:intergenic
GCTCCTCACATGTGGAGTGG+AGG 0.600384 tig0024335:-30428 Msa1416260:CDS
ATATTGTAAAGGTGAGATCT+CGG 0.600496 tig0024335:-32818 Msa1416260:CDS
TGCCATTGCTGTGCGCATGT+TGG 0.601143 tig0024335:+29371 None:intergenic
TTTAAAGGTTGGCGTAAATG+GGG 0.602976 tig0024335:-30524 Msa1416260:intron
ACCTGATCGTCCCCTTCGGA+CGG 0.603999 tig0024335:+33236 None:intergenic
AGGAGATGGAGACACTAAGC+AGG 0.606908 tig0024335:+32848 None:intergenic
TCTCAAGTGACTCCATGGCT+CGG 0.607266 tig0024335:-33265 Msa1416260:CDS
TTCAGATCATCATTGTGGAA+AGG 0.608588 tig0024335:-32649 Msa1416260:CDS
CTTAGAAACACATGATGATG+AGG 0.609621 tig0024335:-30881 Msa1416260:CDS
GAGCTGTTAATTGTGTGAGC+TGG 0.609857 tig0024335:-29480 Msa1416260:CDS
TTATATTCAGATCATCATTG+TGG 0.610290 tig0024335:-32654 Msa1416260:CDS
TGGAAGCATTGAAGACCTTG+AGG 0.611400 tig0024335:-32923 Msa1416260:CDS
TGACCAGGCAGTGCCTCTAT+CGG 0.611974 tig0024335:+29508 None:intergenic
AATGGCATCCATTACTGCAA+TGG 0.618205 tig0024335:-29355 Msa1416260:CDS
GGCCCCATATCCGAATTGTA+CGG 0.618933 tig0024335:+29416 None:intergenic
TGATAAGAGCATTTGCATGT+GGG 0.619083 tig0024335:-30284 Msa1416260:CDS
ATCTCGGTCAAAGCTTCTAG+AGG 0.620596 tig0024335:-32802 Msa1416260:CDS
AAGCTCATTGGGAAGTACAA+AGG 0.624344 tig0024335:-29998 Msa1416260:CDS
GACCGTACAATTCGGATATG+GGG 0.628939 tig0024335:-29418 Msa1416260:CDS
AGAGCTCCTCACATGTGGAG+TGG 0.631004 tig0024335:-30431 Msa1416260:CDS
CACTGGCAGAGGCTAACATG+TGG 0.632424 tig0024335:+29443 None:intergenic
CTGGCAGAGGCTAACATGTG+GGG 0.632842 tig0024335:+29445 None:intergenic
TTTGGATATAACGGCTGACG+GGG 0.633962 tig0024335:-30203 Msa1416260:CDS
ACAAAGGTCATAGGCGCTCG+AGG 0.635818 tig0024335:-29982 Msa1416260:CDS
AAAGAAGTGGAGTCTTGGAA+AGG 0.636859 tig0024335:-30250 Msa1416260:CDS
TGGGCAAGCCTCTAACTGCA+AGG 0.638184 tig0024335:+32704 None:intergenic
TTGACACCAGGTGAGTGCAA+AGG 0.639008 tig0024335:+33098 None:intergenic
TCCTGTACATGGTTTCCAAG+TGG 0.639029 tig0024335:-30331 Msa1416260:CDS
TTAACAGCTCCTGAATGACC+AGG 0.643672 tig0024335:+29493 None:intergenic
AGATGACACTATTGTCAGGT+CGG 0.645072 tig0024335:-33003 Msa1416260:CDS
CTACTACTATCCCTGCAAAG+TGG 0.645119 tig0024335:+32888 None:intergenic
TACCAACATGCGCACAGCAA+TGG 0.645886 tig0024335:-29373 Msa1416260:CDS
ATTCCTCCACTCCACATGTG+AGG 0.658511 tig0024335:+30425 None:intergenic
AGCATTGAAGACCTTGAGGG+AGG 0.665437 tig0024335:-32919 Msa1416260:CDS
TGCGTAAACAGATTGACACC+AGG 0.666046 tig0024335:+33086 None:intergenic
TAACTGAACAGAGAAGAAGA+AGG 0.667440 tig0024335:-34115 Msa1416260:five_prime_UTR
CTGTTCCAATATCAAACACG+CGG 0.669040 tig0024335:+32980 None:intergenic
GTTATAGAAAGAGTGGGGCG+CGG 0.677569 tig0024335:-33142 Msa1416260:CDS
TCGGCTACTACCGTCCGAAG+GGG 0.678925 tig0024335:-33246 Msa1416260:CDS
TCAGGTTGTCGGTTCCAAAG+GGG 0.696509 tig0024335:-33219 Msa1416260:CDS
GCTTGGTTATAGAAAGAGTG+GGG 0.698893 tig0024335:-33147 Msa1416260:CDS
TCAAACTGCAATCATCTGGG+AGG 0.712903 tig0024335:-30803 Msa1416260:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTATTTAAAAATATAT+TGG - tig0024335:31257-31276 Msa1416260:intron 0.0%
!! TGTTAAGATTATTAATATAT+GGG - tig0024335:29987-30006 Msa1416260:CDS 10.0%
!!! AAGTATTAATTTTTGTAAAT+TGG - tig0024335:31389-31408 Msa1416260:intron 10.0%
!!! AGTATTAATTTTTGTAAATT+GGG - tig0024335:31390-31409 Msa1416260:intron 10.0%
!!! TTTATAGAATTTTTACTATA+AGG + tig0024335:32206-32225 None:intergenic 10.0%
!! AGATTAAAAATAATATAGAT+AGG + tig0024335:32312-32331 None:intergenic 10.0%
!! AAAGATTAAGATATATGAAT+CGG + tig0024335:29480-29499 None:intergenic 15.0%
!! CTGTTAAGATTATTAATATA+TGG - tig0024335:29986-30005 Msa1416260:CDS 15.0%
!!! AAAGGATAATAAATTTTTGT+TGG - tig0024335:33329-33348 Msa1416260:CDS 15.0%
!!! TTTGCAAAATAAAATTCTTT+TGG - tig0024335:33571-33590 Msa1416260:intron 15.0%
!! ATTAGATATAAAATGTAGTT+TGG - tig0024335:33687-33706 Msa1416260:intron 15.0%
!! TTAATGATAAGTGTATATAT+TGG - tig0024335:34262-34281 Msa1416260:five_prime_UTR 15.0%
!! TTTCTTGATTATTATTCTAC+TGG + tig0024335:29121-29140 None:intergenic 20.0%
!!! ATGATTATCTTGATTTTAGA+TGG - tig0024335:29587-29606 Msa1416260:intron 20.0%
!!! TTATTTGTTGTTTAAGTTTG+AGG - tig0024335:29699-29718 Msa1416260:intron 20.0%
!! AAATTCTTTGAACTTCTAAA+TGG - tig0024335:30443-30462 Msa1416260:CDS 20.0%
!! AATTCTTTGAACTTCTAAAT+GGG - tig0024335:30444-30463 Msa1416260:CDS 20.0%
!! AAAATATATTGGATACCTTA+AGG - tig0024335:31268-31287 Msa1416260:intron 20.0%
!!! ACGTCAAAAATTTGAAATTT+AGG + tig0024335:31718-31737 None:intergenic 20.0%
!!! TATCCAATTATGATAGATTT+TGG - tig0024335:31854-31873 Msa1416260:intron 20.0%
!! TTTCCAAAATCTATCATAAT+TGG + tig0024335:31860-31879 None:intergenic 20.0%
!!! TTTGTACAATTTTCACATAA+TGG - tig0024335:32547-32566 Msa1416260:intron 20.0%
!!! TTGTACAATTTTCACATAAT+GGG - tig0024335:32548-32567 Msa1416260:intron 20.0%
!!! GGGTTTTAGATTTTAATTTT+TGG - tig0024335:32846-32865 Msa1416260:CDS 20.0%
!!! ATTTTTGGTCTTCTTTTTAA+AGG - tig0024335:32861-32880 Msa1416260:CDS 20.0%
!! AAGAAAAAGAAGTTATTGTT+TGG + tig0024335:33305-33324 None:intergenic 20.0%
!! TATTCCAAAGATTAATTTCT+TGG + tig0024335:33368-33387 None:intergenic 20.0%
!!! ATTAATCTTTGGAATATTGA+AGG - tig0024335:33372-33391 Msa1416260:CDS 20.0%
!! TTATCACTTTATGTCTTATA+AGG - tig0024335:33605-33624 Msa1416260:intron 20.0%
!! TATCACTTTATGTCTTATAA+GGG - tig0024335:33606-33625 Msa1416260:intron 20.0%
!!! AGTAAATATGGATTTTCTAA+AGG + tig0024335:33632-33651 None:intergenic 20.0%
!!! TACATTTTATATCTAATCTC+AGG + tig0024335:33684-33703 None:intergenic 20.0%
!!! ACTTTTTATTCAGACTATTA+AGG + tig0024335:34008-34027 None:intergenic 20.0%
!! CAATTGCAATGATAATAAAA+AGG + tig0024335:34107-34126 None:intergenic 20.0%
!! TTAAAAACTAATAATGTCTC+AGG + tig0024335:34246-34265 None:intergenic 20.0%
! TCATTCGAGTAATAAGAATA+AGG - tig0024335:29220-29239 Msa1416260:three_prime_UTR 25.0%
! GAGTAATAAGAATAAGGTTT+GGG - tig0024335:29226-29245 Msa1416260:three_prime_UTR 25.0%
! AAAAGAAAGAGAGAAATGAT+CGG + tig0024335:29388-29407 None:intergenic 25.0%
! CTGTTATATATCATGTAATC+TGG - tig0024335:29613-29632 Msa1416260:intron 25.0%
! TGATACTCATTCATTCTATT+TGG + tig0024335:29797-29816 None:intergenic 25.0%
!!! GATGTTTTCGCTTTTATTTA+AGG - tig0024335:29830-29849 Msa1416260:intron 25.0%
! ATTCTTTGAACTTCTAAATG+GGG - tig0024335:30445-30464 Msa1416260:CDS 25.0%
! TTATATTCAGATCATCATTG+TGG - tig0024335:30746-30765 Msa1416260:intron 25.0%
! AAGAATAGAAGTCAAACAAA+TGG + tig0024335:30858-30877 None:intergenic 25.0%
! GAAATTGCGATATTTATTGA+TGG - tig0024335:30893-30912 Msa1416260:intron 25.0%
! AAAATTATGTTGTGATGTAC+TGG - tig0024335:31024-31043 Msa1416260:intron 25.0%
! ATTATGTGGATACTAAATTG+TGG - tig0024335:31047-31066 Msa1416260:intron 25.0%
! TAAATCATTCGTATACTTCT+GGG + tig0024335:31323-31342 None:intergenic 25.0%
! TTAAATCATTCGTATACTTC+TGG + tig0024335:31324-31343 None:intergenic 25.0%
! ATATTGACCATTACTTGAAA+AGG - tig0024335:31419-31438 Msa1416260:intron 25.0%
! TATTGACCATTACTTGAAAA+GGG - tig0024335:31420-31439 Msa1416260:intron 25.0%
!! GTTGTTTATATGGTATGTTT+TGG - tig0024335:31482-31501 Msa1416260:intron 25.0%
!!! TATGGTATGTTTTGGTTTAA+AGG - tig0024335:31490-31509 Msa1416260:intron 25.0%
!! TTGAAATTTAGGATACGATA+CGG + tig0024335:31707-31726 None:intergenic 25.0%
! ATCTGAGTTCACTAAATTAA+TGG - tig0024335:31908-31927 Msa1416260:intron 25.0%
! AACTAGACAAAATCTTCTAT+TGG - tig0024335:31937-31956 Msa1416260:intron 25.0%
!!! GTCACATTTTTTTAATACCA+GGG - tig0024335:32091-32110 Msa1416260:intron 25.0%
! TTACAACTAGGATTTCAAAT+TGG + tig0024335:32713-32732 None:intergenic 25.0%
! TGAAGGAAAAAATTACAACT+AGG + tig0024335:32725-32744 None:intergenic 25.0%
!!! AACCAGCTTTTTCATAAATT+TGG + tig0024335:33038-33057 None:intergenic 25.0%
!!! GATTTCTGATTTGGATATAA+CGG - tig0024335:33188-33207 Msa1416260:CDS 25.0%
!! AACTTCTTTTTCTTTGTCAA+AGG - tig0024335:33311-33330 Msa1416260:CDS 25.0%
! TGAACCAAGAAATTAATCTT+TGG - tig0024335:33361-33380 Msa1416260:CDS 25.0%
! TTTATTATAAGGTCTTGCTT+TGG - tig0024335:33441-33460 Msa1416260:five_prime_UTR 25.0%
! TACAAGATATTATCCTTCAA+AGG + tig0024335:33550-33569 None:intergenic 25.0%
!! ATCCATATTTACTTGTTTCT+AGG - tig0024335:33639-33658 Msa1416260:intron 25.0%
! ATAATGTCTCAGGAATTAAA+AGG + tig0024335:34236-34255 None:intergenic 25.0%
CGAGTAATAAGAATAAGGTT+TGG - tig0024335:29225-29244 Msa1416260:three_prime_UTR 30.0%
! TCTCTCTTTCTTTTGTAAGT+CGG - tig0024335:29394-29413 Msa1416260:CDS 30.0%
GCAATCATTCTCAAACTTAT+TGG - tig0024335:29437-29456 Msa1416260:CDS 30.0%
! GATTATTAATATATGGGCTG+AGG - tig0024335:29993-30012 Msa1416260:CDS 30.0%
! TTTGAAACGTATGAAGGTTT+CGG - tig0024335:30055-30074 Msa1416260:CDS 30.0%
! GTTTGTTAGGATAATTGCAA+AGG - tig0024335:30220-30239 Msa1416260:CDS 30.0%
TTCTTTGAACTTCTAAATGG+GGG - tig0024335:30446-30465 Msa1416260:CDS 30.0%
TCCTAAGCAAGATATTGTAA+AGG - tig0024335:30571-30590 Msa1416260:intron 30.0%
ACCTTTACAATATCTTGCTT+AGG + tig0024335:30575-30594 None:intergenic 30.0%
ATATTGTAAAGGTGAGATCT+CGG - tig0024335:30582-30601 Msa1416260:intron 30.0%
AATGGATGTGATTATTGTTG+AGG - tig0024335:31079-31098 Msa1416260:intron 30.0%
AACCAGAAAAATCTAAATCC+CGG + tig0024335:31106-31125 None:intergenic 30.0%
TAAATCATTCGGATACTTCT+GGG + tig0024335:31232-31251 None:intergenic 30.0%
TTAAATCATTCGGATACTTC+TGG + tig0024335:31233-31252 None:intergenic 30.0%
ATACTACCTTAGTATCATCA+TGG - tig0024335:31454-31473 Msa1416260:intron 30.0%
TTAAAGGATGCTATCTTAGT+TGG - tig0024335:31506-31525 Msa1416260:intron 30.0%
TACACCAAGTCAAAATACAA+TGG + tig0024335:31540-31559 None:intergenic 30.0%
ATCACCAACAAGTAGTTAAT+CGG + tig0024335:31835-31854 None:intergenic 30.0%
TACTTCACGAATTGAGATTT+GGG + tig0024335:32052-32071 None:intergenic 30.0%
TTACTTCACGAATTGAGATT+TGG + tig0024335:32053-32072 None:intergenic 30.0%
! GTAACTTTTCTGTCAAAATG+TGG - tig0024335:32069-32088 Msa1416260:intron 30.0%
!!! GGTCACATTTTTTTAATACC+AGG - tig0024335:32090-32109 Msa1416260:intron 30.0%
!! AGTAACAAGTAGAGTATTGT+CGG + tig0024335:32143-32162 None:intergenic 30.0%
GGTTATTGAGTTCTTATTGA+AGG + tig0024335:32185-32204 None:intergenic 30.0%
GCATACATACTCATGTAAAT+GGG + tig0024335:32253-32272 None:intergenic 30.0%
GACTTCAATTTGATGAATGA+GGG + tig0024335:32275-32294 None:intergenic 30.0%
! GCTATATAGAAAGTAATGGA+GGG + tig0024335:32442-32461 None:intergenic 30.0%
AGCTATATAGAAAGTAATGG+AGG + tig0024335:32443-32462 None:intergenic 30.0%
TCGAGCTATATAGAAAGTAA+TGG + tig0024335:32446-32465 None:intergenic 30.0%
!!! CTGTTTTCATGCTTTTTTTC+TGG - tig0024335:32660-32679 Msa1416260:CDS 30.0%
!! TTGGTCTTCTTTTTAAAGGT+TGG - tig0024335:32865-32884 Msa1416260:CDS 30.0%
!! TTTTTAAAGGTTGGCGTAAA+TGG - tig0024335:32874-32893 Msa1416260:CDS 30.0%
!! TTTTAAAGGTTGGCGTAAAT+GGG - tig0024335:32875-32894 Msa1416260:CDS 30.0%
CTCCAAATTTATGAAAAAGC+TGG - tig0024335:33033-33052 Msa1416260:CDS 30.0%
! ATTTATGAAAAAGCTGGTTC+TGG - tig0024335:33039-33058 Msa1416260:CDS 30.0%
ATCGCTTAAGATTTCTGATT+TGG - tig0024335:33179-33198 Msa1416260:CDS 30.0%
TTGAACAGCAATACTGTATT+GGG + tig0024335:33246-33265 None:intergenic 30.0%
ATTGAACAGCAATACTGTAT+TGG + tig0024335:33247-33266 None:intergenic 30.0%
GCTGTTCAATAAAGAAACAA+AGG - tig0024335:33257-33276 Msa1416260:CDS 30.0%
ATAAAGAAACAAAGGATGAG+AGG - tig0024335:33265-33284 Msa1416260:CDS 30.0%
CACCTAGAAACAAGTAAATA+TGG + tig0024335:33644-33663 None:intergenic 30.0%
CTACTATAATCAGAGATGTT+AGG + tig0024335:33780-33799 None:intergenic 30.0%
TGATTTCATTCCTTCTTTGT+AGG - tig0024335:33840-33859 Msa1416260:intron 30.0%
!! TCTACTTTTGATGACAGTAA+TGG + tig0024335:34138-34157 None:intergenic 30.0%
TAACTGAACAGAGAAGAAGA+AGG - tig0024335:29285-29304 Msa1416260:three_prime_UTR 35.0%
GAAGAAGAAGAAGAAGAAGA+AGG - tig0024335:29311-29330 Msa1416260:three_prime_UTR 35.0%
AAGAGAGAAATGATCGGAAT+CGG + tig0024335:29382-29401 None:intergenic 35.0%
!!! TCCTTTGAGGTTTTTTTCAG+AGG - tig0024335:29923-29942 Msa1416260:CDS 35.0%
! ACCTCTGAAAAAAACCTCAA+AGG + tig0024335:29927-29946 None:intergenic 35.0%
GAATTAGTTGGATTGTCGAA+CGG - tig0024335:30083-30102 Msa1416260:CDS 35.0%
AATTAGTTGGATTGTCGAAC+GGG - tig0024335:30084-30103 Msa1416260:CDS 35.0%
! TAAAGAGAGACGAGTTTGTT+AGG - tig0024335:30207-30226 Msa1416260:CDS 35.0%
TTTACGCAACAAGTACTTGA+TGG - tig0024335:30329-30348 Msa1416260:CDS 35.0%
TTACGCAACAAGTACTTGAT+GGG - tig0024335:30330-30349 Msa1416260:CDS 35.0%
AACAAGTACTTGATGGGAAT+TGG - tig0024335:30336-30355 Msa1416260:CDS 35.0%
ACAAGTACTTGATGGGAATT+GGG - tig0024335:30337-30356 Msa1416260:CDS 35.0%
ACAATATCTTGCTTAGGAGA+TGG + tig0024335:30569-30588 None:intergenic 35.0%
!!! TTTTCAGGTATCATCACTGT+TGG + tig0024335:30644-30663 None:intergenic 35.0%
GATCCAATGAGTTGTGAAAT+GGG + tig0024335:30718-30737 None:intergenic 35.0%
TGATCCAATGAGTTGTGAAA+TGG + tig0024335:30719-30738 None:intergenic 35.0%
TTCAGATCATCATTGTGGAA+AGG - tig0024335:30751-30770 Msa1416260:intron 35.0%
GTATACAATAGTCTCAGCAA+AGG + tig0024335:30961-30980 None:intergenic 35.0%
TTGTGATGTACTGGATTATG+TGG - tig0024335:31033-31052 Msa1416260:intron 35.0%
AAATTGTGGCATCTTGCAAA+TGG - tig0024335:31061-31080 Msa1416260:intron 35.0%
ATGTGATTATTGTTGAGGTC+CGG - tig0024335:31084-31103 Msa1416260:intron 35.0%
GATACCTTAAGGATACGTTA+AGG - tig0024335:31279-31298 Msa1416260:intron 35.0%
GTATCCTTAACGTATCCTTA+AGG + tig0024335:31286-31305 None:intergenic 35.0%
!!! TACTCACCCTTTTCAAGTAA+TGG + tig0024335:31429-31448 None:intergenic 35.0%
!! ATGCTATCTTAGTTGGTGAA+TGG - tig0024335:31513-31532 Msa1416260:intron 35.0%
!!! TGGTCCATTGTATTTTGACT+TGG - tig0024335:31533-31552 Msa1416260:intron 35.0%
TCACCAACAAGTAGTTAATC+GGG + tig0024335:31834-31853 None:intergenic 35.0%
GAAAGAAAAACATCAAACCC+TGG + tig0024335:32111-32130 None:intergenic 35.0%
!! GTAACAAGTAGAGTATTGTC+GGG + tig0024335:32142-32161 None:intergenic 35.0%
ATACTCATGTAAATGGGCAT+GGG + tig0024335:32247-32266 None:intergenic 35.0%
GGCATACATACTCATGTAAA+TGG + tig0024335:32254-32273 None:intergenic 35.0%
GGACTTCAATTTGATGAATG+AGG + tig0024335:32276-32295 None:intergenic 35.0%
CGCTGTACTAAATAGCAAAA+GGG + tig0024335:32414-32433 None:intergenic 35.0%
TCGCTGTACTAAATAGCAAA+AGG + tig0024335:32415-32434 None:intergenic 35.0%
! TATAGAAAGTAATGGAGGGA+AGG + tig0024335:32438-32457 None:intergenic 35.0%
! CTTAGAAACACATGATGATG+AGG - tig0024335:32519-32538 Msa1416260:intron 35.0%
! AAACACATGATGATGAGGTA+TGG - tig0024335:32524-32543 Msa1416260:intron 35.0%
ATGATCAAACTGCAATCATC+TGG - tig0024335:32593-32612 Msa1416260:intron 35.0%
TGATCAAACTGCAATCATCT+GGG - tig0024335:32594-32613 Msa1416260:intron 35.0%
!! TTTTGTGCATTGATGAGTGA+GGG + tig0024335:32763-32782 None:intergenic 35.0%
!! TTTTTGTGCATTGATGAGTG+AGG + tig0024335:32764-32783 None:intergenic 35.0%
! GTGCACTCACATTTAGAATA+TGG - tig0024335:32806-32825 Msa1416260:CDS 35.0%
TTTAAAGGTTGGCGTAAATG+GGG - tig0024335:32876-32895 Msa1416260:CDS 35.0%
CGTGTAAAGCATAGATTATC+TGG - tig0024335:32901-32920 Msa1416260:CDS 35.0%
! AAACAGAAGAAATGGGTTTC+TGG + tig0024335:32930-32949 None:intergenic 35.0%
AACCCATTTCTTCTGTTTCA+TGG - tig0024335:32932-32951 Msa1416260:CDS 35.0%
CTCCATGAAACAGAAGAAAT+GGG + tig0024335:32937-32956 None:intergenic 35.0%
ACTCCATGAAACAGAAGAAA+TGG + tig0024335:32938-32957 None:intergenic 35.0%
ATAAATTTGGAGACACTTGC+CGG + tig0024335:33025-33044 None:intergenic 35.0%
!! TGATAAGAGCATTTGCATGT+GGG - tig0024335:33116-33135 Msa1416260:CDS 35.0%
ATTTGCATGTGGGAATTAGA+TGG - tig0024335:33126-33145 Msa1416260:CDS 35.0%
TTTGCATGTGGGAATTAGAT+GGG - tig0024335:33127-33146 Msa1416260:CDS 35.0%
ATTATAAGGTCTTGCTTTGG+TGG - tig0024335:33444-33463 Msa1416260:five_prime_UTR 35.0%
GAATGAACACAATCCTTTGA+AGG - tig0024335:33534-33553 Msa1416260:intron 35.0%
GCTGTGAATCTTCTTTCATT+TGG - tig0024335:33728-33747 Msa1416260:intron 35.0%
TAGTCTCCATTGCTTAAATG+TGG - tig0024335:33797-33816 Msa1416260:intron 35.0%
CATTGTCCACATTTAAGCAA+TGG + tig0024335:33806-33825 None:intergenic 35.0%
CATATGTAGACCTACAAAGA+AGG + tig0024335:33853-33872 None:intergenic 35.0%
CTTCTTTGTAGGTCTACATA+TGG - tig0024335:33851-33870 Msa1416260:intron 35.0%
TTCCATGAGTCTAATTCACT+TGG + tig0024335:34303-34322 None:intergenic 35.0%
! CTCTTTCTTTTGTAAGTCGG+TGG - tig0024335:29397-29416 Msa1416260:CDS 40.0%
GCAGATATTGTGTTCCTTTG+AGG - tig0024335:29910-29929 Msa1416260:intron 40.0%
!! ACCAGCTTTGAAACGTATGA+AGG - tig0024335:30049-30068 Msa1416260:CDS 40.0%
ACCTTCATACGTTTCAAAGC+TGG + tig0024335:30053-30072 None:intergenic 40.0%
GTTTCGGCGAAAGAATTAGT+TGG - tig0024335:30071-30090 Msa1416260:CDS 40.0%
! TCTTCTTCTAAAGAGCCTGT+TGG - tig0024335:30107-30126 Msa1416260:CDS 40.0%
TCACTTGAGAAACTTCCAAC+AGG + tig0024335:30125-30144 None:intergenic 40.0%
AAGTTTCTCAAGTGACTCCA+TGG - tig0024335:30130-30149 Msa1416260:CDS 40.0%
GTCTCTCTTTATAACCCCTT+TGG + tig0024335:30198-30217 None:intergenic 40.0%
TCGCTTGGTTATAGAAAGAG+TGG - tig0024335:30251-30270 Msa1416260:CDS 40.0%
CGCTTGGTTATAGAAAGAGT+GGG - tig0024335:30252-30271 Msa1416260:CDS 40.0%
GCTTGGTTATAGAAAGAGTG+GGG - tig0024335:30253-30272 Msa1416260:CDS 40.0%
GTAGCTACATTGCGTAAGAT+TGG - tig0024335:30368-30387 Msa1416260:CDS 40.0%
TGACAGATGACACTATTGTC+AGG - tig0024335:30393-30412 Msa1416260:CDS 40.0%
AGATGACACTATTGTCAGGT+CGG - tig0024335:30397-30416 Msa1416260:CDS 40.0%
CTGTTCCAATATCAAACACG+CGG + tig0024335:30423-30442 None:intergenic 40.0%
TGAACTTCTAAATGGGGGAA+AGG - tig0024335:30451-30470 Msa1416260:CDS 40.0%
TCTAAATGGGGGAAAGGTTA+TGG - tig0024335:30457-30476 Msa1416260:CDS 40.0%
GCAGGGATAGTAGTAGAATT+CGG - tig0024335:30519-30538 Msa1416260:CDS 40.0%
CAGGGATAGTAGTAGAATTC+GGG - tig0024335:30520-30539 Msa1416260:CDS 40.0%
CAGTGATGATACCTGAAAAG+AGG - tig0024335:30645-30664 Msa1416260:intron 40.0%
GATGATACCTGAAAAGAGGT+TGG - tig0024335:30649-30668 Msa1416260:intron 40.0%
! AGATGTTCCAACCTCTTTTC+AGG + tig0024335:30659-30678 None:intergenic 40.0%
TGAAAAGAGGTTGGAACATC+TGG - tig0024335:30658-30677 Msa1416260:intron 40.0%
TTGCCCATTTCACAACTCAT+TGG - tig0024335:30712-30731 Msa1416260:intron 40.0%
! GATACCATCTAGAACAGTAC+AGG - tig0024335:30778-30797 Msa1416260:intron 40.0%
! CTAACCTGTACTGTTCTAGA+TGG + tig0024335:30785-30804 None:intergenic 40.0%
!! GCTGACTTGTTGATCAGTAA+CGG - tig0024335:30915-30934 Msa1416260:intron 40.0%
TGTGATTATTGTTGAGGTCC+GGG - tig0024335:31085-31104 Msa1416260:intron 40.0%
! GTCCGGGATTTAGATTTTTC+TGG - tig0024335:31101-31120 Msa1416260:intron 40.0%
!! ATACTTCTGGGATACGTATC+CGG + tig0024335:31220-31239 None:intergenic 40.0%
!! ATACTTCTGGGATACGTATC+CGG + tig0024335:31220-31239 None:intergenic 40.0%
CATGGTGCAGGTTGTTTATA+TGG - tig0024335:31472-31491 Msa1416260:intron 40.0%
! ATTTAGGATACGATACGGCT+TGG + tig0024335:31702-31721 None:intergenic 40.0%
AACAAGTAGTTAATCGGGGT+TGG + tig0024335:31829-31848 None:intergenic 40.0%
AACCCCGATTAACTACTTGT+TGG - tig0024335:31828-31847 Msa1416260:intron 40.0%
CACCAACAAGTAGTTAATCG+GGG + tig0024335:31833-31852 None:intergenic 40.0%
! TGATGTTTTTCTTTCGCCCT+TGG - tig0024335:32116-32135 Msa1416260:intron 40.0%
CATACTCATGTAAATGGGCA+TGG + tig0024335:32248-32267 None:intergenic 40.0%
AAAAATCATCCCCAAAAGCC+AGG - tig0024335:32342-32361 Msa1416260:intron 40.0%
AAAATCATCCCCAAAAGCCA+GGG - tig0024335:32343-32362 Msa1416260:intron 40.0%
AGATCTGTCACAGTATTAGC+AGG + tig0024335:32501-32520 None:intergenic 40.0%
ATGGCTTAACTCTGCAACAT+TGG - tig0024335:32825-32844 Msa1416260:CDS 40.0%
TGGCTTAACTCTGCAACATT+GGG - tig0024335:32826-32845 Msa1416260:CDS 40.0%
!! GTGATAAGAGCATTTGCATG+TGG - tig0024335:33115-33134 Msa1416260:CDS 40.0%
GGAATTAGATGGGAAAGAAG+TGG - tig0024335:33137-33156 Msa1416260:CDS 40.0%
AAAGAAGTGGAGTCTTGGAA+AGG - tig0024335:33150-33169 Msa1416260:CDS 40.0%
GATTTGGATATAACGGCTGA+CGG - tig0024335:33195-33214 Msa1416260:CDS 40.0%
ATTTGGATATAACGGCTGAC+GGG - tig0024335:33196-33215 Msa1416260:CDS 40.0%
TTGTACTTCCCAATGAGCTT+AGG + tig0024335:33402-33421 None:intergenic 40.0%
! AAGCTCATTGGGAAGTACAA+AGG - tig0024335:33402-33421 Msa1416260:five_prime_UTR 40.0%
! TTGGGAAGTACAAAGGTCAT+AGG - tig0024335:33409-33428 Msa1416260:five_prime_UTR 40.0%
TTCTAGGTGTGATGTTCAGT+AGG - tig0024335:33655-33674 Msa1416260:intron 40.0%
! ATCAGAGATGTTAGGTACTG+CGG + tig0024335:33772-33791 None:intergenic 40.0%
ATGACCGTACAATTCGGATA+TGG - tig0024335:33980-33999 Msa1416260:intron 40.0%
TGACCGTACAATTCGGATAT+GGG - tig0024335:33981-34000 Msa1416260:intron 40.0%
AATGGCATCCATTACTGCAA+TGG - tig0024335:34045-34064 Msa1416260:five_prime_UTR 40.0%
AAGTTCCTCCATTGCAGTAA+TGG + tig0024335:34056-34075 None:intergenic 40.0%
AGCCAAGTGAATTAGACTCA+TGG - tig0024335:34298-34317 Msa1416260:five_prime_UTR 40.0%
ATGATCGGAATCGGAGTTTG+AGG + tig0024335:29373-29392 None:intergenic 45.0%
! GGCTGAGGTGAACTTTTCAT+GGG - tig0024335:30008-30027 Msa1416260:CDS 45.0%
! TGAGGTGAACTTTTCATGGG+AGG - tig0024335:30011-30030 Msa1416260:CDS 45.0%
! TGAACTTTTCATGGGAGGTG+TGG - tig0024335:30016-30035 Msa1416260:CDS 45.0%
!! ATCAGGTTGTCGGTTCCAAA+GGG - tig0024335:30180-30199 Msa1416260:CDS 45.0%
!! GCAAAGGCATTGTATTCGCT+TGG - tig0024335:30236-30255 Msa1416260:CDS 45.0%
TGCGTAAACAGATTGACACC+AGG + tig0024335:30317-30336 None:intergenic 45.0%
!! TGGAAGCATTGAAGACCTTG+AGG - tig0024335:30477-30496 Msa1416260:CDS 45.0%
!! GGAAGCATTGAAGACCTTGA+GGG - tig0024335:30478-30497 Msa1416260:CDS 45.0%
AGGAGATTACTCCACTTTGC+AGG - tig0024335:30501-30520 Msa1416260:CDS 45.0%
GGAGATTACTCCACTTTGCA+GGG - tig0024335:30502-30521 Msa1416260:CDS 45.0%
CTACTACTATCCCTGCAAAG+TGG + tig0024335:30515-30534 None:intergenic 45.0%
ATCTCGGTCAAAGCTTCTAG+AGG - tig0024335:30598-30617 Msa1416260:intron 45.0%
TCAGGTATCATCACTGTTGG+AGG + tig0024335:30641-30660 None:intergenic 45.0%
AGCCTCTAACTGCAAGGTAA+GGG + tig0024335:30693-30712 None:intergenic 45.0%
AAGCCTCTAACTGCAAGGTA+AGG + tig0024335:30694-30713 None:intergenic 45.0%
AAAGGTTCCAGTCTACAAGG+CGG + tig0024335:30943-30962 None:intergenic 45.0%
AGCAAAGGTTCCAGTCTACA+AGG + tig0024335:30946-30965 None:intergenic 45.0%
GGCTTCATAGATGCAAAGAC+AGG + tig0024335:31129-31148 None:intergenic 45.0%
GTCTTTGCATCTATGAAGCC+CGG - tig0024335:31129-31148 Msa1416260:intron 45.0%
TATCCGATACGTATCCGACA+CGG + tig0024335:31177-31196 None:intergenic 45.0%
!! TACTTCTGGGATACGTATCC+GGG + tig0024335:31219-31238 None:intergenic 45.0%
GGATACGTTAAGGATACTCC+CGG - tig0024335:31289-31308 Msa1416260:intron 45.0%
!! TACTTCTGGGATACGTATCC+GGG + tig0024335:31219-31238 None:intergenic 45.0%
CCTGCACCATGATGATACTA+AGG + tig0024335:31463-31482 None:intergenic 45.0%
CCTTAGTATCATCATGGTGC+AGG - tig0024335:31460-31479 Msa1416260:intron 45.0%
ATACGGATACGGGTACGATA+CGG + tig0024335:31751-31770 None:intergenic 45.0%
TGCAATATGAAGCCCCGATA+CGG + tig0024335:31774-31793 None:intergenic 45.0%
GGGGCTTCATATTGCATCAA+AGG - tig0024335:31778-31797 Msa1416260:intron 45.0%
!! TTTTCTCCTCCCTGGCTTTT+GGG + tig0024335:32355-32374 None:intergenic 45.0%
!! ATTTTCTCCTCCCTGGCTTT+TGG + tig0024335:32356-32375 None:intergenic 45.0%
! TTTCTCGATTTTCTCCTCCC+TGG + tig0024335:32363-32382 None:intergenic 45.0%
GGGAGGAGAAAATCGAGAAA+AGG - tig0024335:32363-32382 Msa1416260:intron 45.0%
TCAAACTGCAATCATCTGGG+AGG - tig0024335:32597-32616 Msa1416260:intron 45.0%
GGCATTTGGCTGTGATTTGA+AGG + tig0024335:32742-32761 None:intergenic 45.0%
!! CATTGATGAGTGAGGGCATT+TGG + tig0024335:32756-32775 None:intergenic 45.0%
GTGGAGTGGAGGAATCTATT+AGG - tig0024335:32983-33002 Msa1416260:CDS 45.0%
TGGAGGAATCTATTAGGCGT+TGG - tig0024335:32989-33008 Msa1416260:CDS 45.0%
GGAGGAATCTATTAGGCGTT+GGG - tig0024335:32990-33009 Msa1416260:CDS 45.0%
ATGGGAAAGAAGTGGAGTCT+TGG - tig0024335:33145-33164 Msa1416260:CDS 45.0%
TTTGGATATAACGGCTGACG+GGG - tig0024335:33197-33216 Msa1416260:CDS 45.0%
AAGGCGATCCTAAGCTCATT+GGG - tig0024335:33391-33410 Msa1416260:exon 45.0%
GGCGCTCGAGGTTTATTATA+AGG - tig0024335:33430-33449 Msa1416260:five_prime_UTR 45.0%
TTTCGTTGCAAGTGGAAGTG+AGG - tig0024335:33479-33498 Msa1416260:five_prime_UTR 45.0%
AAGTGGAAGTGAGGATTCAC+AGG - tig0024335:33488-33507 Msa1416260:five_prime_UTR 45.0%
GAAGTGAGGATTCACAGGTA+TGG - tig0024335:33493-33512 Msa1416260:intron 45.0%
! AGATGTTAGGTACTGCGGTA+TGG + tig0024335:33767-33786 None:intergenic 45.0%
TTAACAGCTCCTGAATGACC+AGG + tig0024335:33910-33929 None:intergenic 45.0%
GAGCTGTTAATTGTGTGAGC+TGG - tig0024335:33920-33939 Msa1416260:intron 45.0%
CCAGTGATGACCGTACAATT+CGG - tig0024335:33974-33993 Msa1416260:intron 45.0%
GACCGTACAATTCGGATATG+GGG - tig0024335:33982-34001 Msa1416260:intron 45.0%
!! AAAAATTAAATTAAATCATT+CGG + tig0024335:31243-31262 None:intergenic 5.0%
! GGGCTGAGGTGAACTTTTCA+TGG - tig0024335:30007-30026 Msa1416260:CDS 50.0%
TCTCAAGTGACTCCATGGCT+CGG - tig0024335:30135-30154 Msa1416260:CDS 50.0%
!! GATCAGGTTGTCGGTTCCAA+AGG - tig0024335:30179-30198 Msa1416260:CDS 50.0%
!! TCAGGTTGTCGGTTCCAAAG+GGG - tig0024335:30181-30200 Msa1416260:CDS 50.0%
GTTATAGAAAGAGTGGGGCG+CGG - tig0024335:30258-30277 Msa1416260:CDS 50.0%
GGAATACCTTTGCACTCACC+TGG - tig0024335:30296-30315 Msa1416260:CDS 50.0%
TTGACACCAGGTGAGTGCAA+AGG + tig0024335:30305-30324 None:intergenic 50.0%
! AGCATTGAAGACCTTGAGGG+AGG - tig0024335:30481-30500 Msa1416260:CDS 50.0%
TGGAGTAATCTCCTCCCTCA+AGG + tig0024335:30495-30514 None:intergenic 50.0%
AGGAGATGGAGACACTAAGC+AGG + tig0024335:30555-30574 None:intergenic 50.0%
AGCCCTTACCTTGCAGTTAG+AGG - tig0024335:30688-30707 Msa1416260:intron 50.0%
GAAGCCCGGATACTCCAAAA+TGG - tig0024335:31143-31162 Msa1416260:intron 50.0%
!!! GGCACCATTTTGGAGTATCC+GGG + tig0024335:31150-31169 None:intergenic 50.0%
!!! CGGCACCATTTTGGAGTATC+CGG + tig0024335:31151-31170 None:intergenic 50.0%
ATACGTATCCGACACGGGTA+CGG + tig0024335:31171-31190 None:intergenic 50.0%
TACCCGTGTCGGATACGTAT+CGG - tig0024335:31171-31190 Msa1416260:intron 50.0%
ATCCGATACGTATCCGACAC+GGG + tig0024335:31176-31195 None:intergenic 50.0%
TATCGGATACCGATACTCCG+CGG - tig0024335:31188-31207 Msa1416260:intron 50.0%
TACGGATACGGGTACGATAC+GGG + tig0024335:31750-31769 None:intergenic 50.0%
ACCCGTATCCGTATCCGTAT+CGG - tig0024335:31757-31776 Msa1416260:intron 50.0%
ATGAAGCCCCGATACGGATA+CGG + tig0024335:31768-31787 None:intergenic 50.0%
!! GTAGAGTATTGTCGGGCCAA+GGG + tig0024335:32135-32154 None:intergenic 50.0%
!! AGTAGAGTATTGTCGGGCCA+AGG + tig0024335:32136-32155 None:intergenic 50.0%
GGCATGGGTTTGCATCGAAA+AGG + tig0024335:32232-32251 None:intergenic 50.0%
!! TAGATAGGAGCACTGACTCG+TGG + tig0024335:32297-32316 None:intergenic 50.0%
!! TTTCTCCTCCCTGGCTTTTG+GGG + tig0024335:32354-32373 None:intergenic 50.0%
GTGAGGAGCTCTTCGTCATT+AGG + tig0024335:32961-32980 None:intergenic 50.0%
ATTCCTCCACTCCACATGTG+AGG + tig0024335:32978-32997 None:intergenic 50.0%
!! AGGCGTTGGGATGTTTCTAC+CGG - tig0024335:33003-33022 Msa1416260:CDS 50.0%
CTGGCTTAGTCTCCTGTACA+TGG - tig0024335:33058-33077 Msa1416260:CDS 50.0%
GAAGGCGATCCTAAGCTCAT+TGG - tig0024335:33390-33409 Msa1416260:exon 50.0%
GAGCAAGCTTTCGTTGCAAG+TGG - tig0024335:33471-33490 Msa1416260:five_prime_UTR 50.0%
! TACATATGGCACCGAAGCTC+AGG - tig0024335:33865-33884 Msa1416260:intron 50.0%
! GCTAACATGTGGGGATTAGC+TGG + tig0024335:33949-33968 None:intergenic 50.0%
ACTGGCAGAGGCTAACATGT+GGG + tig0024335:33959-33978 None:intergenic 50.0%
CCGAATTGTACGGTCATCAC+TGG + tig0024335:33977-33996 None:intergenic 50.0%
GGCCCCATATCCGAATTGTA+CGG + tig0024335:33987-34006 None:intergenic 50.0%
TACCAACATGCGCACAGCAA+TGG - tig0024335:34027-34046 Msa1416260:five_prime_UTR 50.0%
GGCATCCATTACTGCAATGG+AGG - tig0024335:34048-34067 Msa1416260:five_prime_UTR 50.0%
GACAACCTGATCGTCCCCTT+CGG + tig0024335:30171-30190 None:intergenic 55.0%
! GAAGGGGACGATCAGGTTGT+CGG - tig0024335:30170-30189 Msa1416260:CDS 55.0%
GTCGGCCGCGTGTTTGATAT+TGG - tig0024335:30415-30434 Msa1416260:CDS 55.0%
TGGGCAAGCCTCTAACTGCA+AGG + tig0024335:30699-30718 None:intergenic 55.0%
! ACACGGGTACGGCACCATTT+TGG + tig0024335:31160-31179 None:intergenic 55.0%
!! AAATGGTGCCGTACCCGTGT+CGG - tig0024335:31160-31179 Msa1416260:intron 55.0%
!! TACGTATCCGGGAGTATCCG+CGG + tig0024335:31208-31227 None:intergenic 55.0%
CCCGATACGGATACGGATAC+GGG + tig0024335:31761-31780 None:intergenic 55.0%
CCCGTATCCGTATCCGTATC+GGG - tig0024335:31758-31777 Msa1416260:intron 55.0%
CCCCGATACGGATACGGATA+CGG + tig0024335:31762-31781 None:intergenic 55.0%
CCGTATCCGTATCCGTATCG+GGG - tig0024335:31759-31778 Msa1416260:intron 55.0%
ATCATCCCCAAAAGCCAGGG+AGG - tig0024335:32346-32365 Msa1416260:intron 55.0%
GACGAAGAGCTCCTCACATG+TGG - tig0024335:32964-32983 Msa1416260:CDS 55.0%
AGAGCTCCTCACATGTGGAG+TGG - tig0024335:32969-32988 Msa1416260:CDS 55.0%
ACAAAGGTCATAGGCGCTCG+AGG - tig0024335:33418-33437 Msa1416260:five_prime_UTR 55.0%
!! CTATCGGCTCTCCTGAGCTT+CGG + tig0024335:33879-33898 None:intergenic 55.0%
AAGCTCAGGAGAGCCGATAG+AGG - tig0024335:33879-33898 Msa1416260:intron 55.0%
TGACCAGGCAGTGCCTCTAT+CGG + tig0024335:33895-33914 None:intergenic 55.0%
CTGGCAGAGGCTAACATGTG+GGG + tig0024335:33958-33977 None:intergenic 55.0%
CACTGGCAGAGGCTAACATG+TGG + tig0024335:33960-33979 None:intergenic 55.0%
TGTACGGTCATCACTGGCAG+AGG + tig0024335:33971-33990 None:intergenic 55.0%
TGCCATTGCTGTGCGCATGT+TGG + tig0024335:34032-34051 None:intergenic 55.0%
CTCGGCTACTACCGTCCGAA+GGG - tig0024335:30153-30172 Msa1416260:CDS 60.0%
TCGGCTACTACCGTCCGAAG+GGG - tig0024335:30154-30173 Msa1416260:CDS 60.0%
ACCTGATCGTCCCCTTCGGA+CGG + tig0024335:30167-30186 None:intergenic 60.0%
AACGGCACCGCCTTGTAGAC+TGG - tig0024335:30933-30952 Msa1416260:intron 60.0%
!! CGGGAGTATCCGCGGAGTAT+CGG + tig0024335:31200-31219 None:intergenic 60.0%
CGATACTCCGCGGATACTCC+CGG - tig0024335:31198-31217 Msa1416260:intron 60.0%
GCTCCTCACATGTGGAGTGG+AGG - tig0024335:32972-32991 Msa1416260:CDS 60.0%
!! GAGGCACTGCCTGGTCATTC+AGG - tig0024335:33898-33917 Msa1416260:intron 60.0%
GGACGGTAGTAGCCGAGCCA+TGG + tig0024335:30150-30169 None:intergenic 65.0%
GCTCGGCTACTACCGTCCGA+AGG - tig0024335:30152-30171 Msa1416260:CDS 65.0%
ACCGTCCGAAGGGGACGATC+AGG - tig0024335:30163-30182 Msa1416260:CDS 65.0%
AAAGAGTGGGGCGCGGCTAG+AGG - tig0024335:30265-30284 Msa1416260:CDS 65.0%
!! GAGCCGATAGAGGCACTGCC+TGG - tig0024335:33889-33908 Msa1416260:intron 65.0%
GCGCGGCTAGAGGAGGAGTC+TGG - tig0024335:30275-30294 Msa1416260:CDS 70.0%
GAGTGGGGCGCGGCTAGAGG+AGG - tig0024335:30268-30287 Msa1416260:CDS 75.0%
Chromosome Type Strat End Strand Name
tig0024335 gene 29090 34332 29090 ID=Msa1416260;Name=Msa1416260
tig0024335 mRNA 29090 34332 29090 ID=Msa1416260-mRNA-1;Parent=Msa1416260;Name=Msa1416260-mRNA-1;_AED=0.01;_eAED=0.01;_QI=430|1|1|1|0.75|0.6|5|255|572
tig0024335 exon 29090 29560 29090 ID=Msa1416260-mRNA-1:exon:22852;Parent=Msa1416260-mRNA-1
tig0024335 exon 29913 30539 29913 ID=Msa1416260-mRNA-1:exon:22851;Parent=Msa1416260-mRNA-1
tig0024335 exon 30804 30905 30804 ID=Msa1416260-mRNA-1:exon:22850;Parent=Msa1416260-mRNA-1
tig0024335 exon 32623 33508 32623 ID=Msa1416260-mRNA-1:exon:22849;Parent=Msa1416260-mRNA-1
tig0024335 exon 34015 34332 34015 ID=Msa1416260-mRNA-1:exon:22848;Parent=Msa1416260-mRNA-1
tig0024335 five_prime_UTR 34015 34332 34015 ID=Msa1416260-mRNA-1:five_prime_utr;Parent=Msa1416260-mRNA-1
tig0024335 five_prime_UTR 33397 33508 33397 ID=Msa1416260-mRNA-1:five_prime_utr;Parent=Msa1416260-mRNA-1
tig0024335 CDS 32623 33396 32623 ID=Msa1416260-mRNA-1:cds;Parent=Msa1416260-mRNA-1
tig0024335 CDS 30804 30905 30804 ID=Msa1416260-mRNA-1:cds;Parent=Msa1416260-mRNA-1
tig0024335 CDS 29913 30539 29913 ID=Msa1416260-mRNA-1:cds;Parent=Msa1416260-mRNA-1
tig0024335 CDS 29345 29560 29345 ID=Msa1416260-mRNA-1:cds;Parent=Msa1416260-mRNA-1
tig0024335 three_prime_UTR 29090 29344 29090 ID=Msa1416260-mRNA-1:three_prime_utr;Parent=Msa1416260-mRNA-1
Gene Sequence

>Msa1416260

ATGGGAGGTGTGGACGATGAAGAACCAGCTTTGAAACGTATGAAGGTTTCGGCGAAAGAATTAGTTGGATTGTCGAACGGGTCTTCTTCTAAAGAGCCTGTTGGAAGTTTCTCAAGTGACTCCATGGCTCGGCTACTACCGTCCGAAGGGGACGATCAGGTTGTCGGTTCCAAAGGGGTTATAAAGAGAGACGAGTTTGTTAGGATAATTGCAAAGGCATTGTATTCGCTTGGTTATAGAAAGAGTGGGGCGCGGCTAGAGGAGGAGTCTGGAATACCTTTGCACTCACCTGGTGTCAATCTGTTTACGCAACAAGTACTTGATGGGAATTGGGATGAGAGTGTAGCTACATTGCGTAAGATTGGTTTGACAGATGACACTATTGTCAGGTCGGCCGCGTGTTTGATATTGGAACAGAAATTCTTTGAACTTCTAAATGGGGGAAAGGTTATGGAAGCATTGAAGACCTTGAGGGAGGAGATTACTCCACTTTGCAGGGATAGTAGTAGAATTCGGGAACTTTCGTCCTGCTTAGTGTCTCCATCTCCTAAGCAAGATATTGTAAAGGTGAGATCTCGGTCAAAGCTTCTAGAGGAATTGCAGAAACTGCTTCCTCCAACAGTGATGATACCTGAAAAGAGGTTGGAACATCTGGTTGAACAAGCCCTTACCTTGCAGTTAGAGGCTTGCCCATTTCACAACTCATTGGATCAGATGTCGTTATATTCAGATCATCATTGTGGAAAGGATCTGATACCATCTAGAACAGTACAGATCTTAGAAACACATGATGATGAGGTATGGTTTGTACAATTTTCACATAATGGGAAGTATTTAGCTTCAGCGTCAAATGATCAAACTGCAATCATCTGGGAGGTTGGCGTAAATGGGGTGCGTGTAAAGCATAGATTATCTGGTCACCAGAAACCCATTTCTTCTGTTTCATGGAGTCCTAATGACGAAGAGCTCCTCACATGTGGAGTGGAGGAATCTATTAGGCGTTGGGATGTTTCTACCGGCAAGTGTCTCCAAATTTATGAAAAAGCTGGTTCTGGCTTAGTCTCCTGTACATGGTTTCCAAGTGGGAAACATATACTTTCTGGCGTAAGTGATAAGAGCATTTGCATGTGGGAATTAGATGGGAAAGAAGTGGAGTCTTGGAAAGGACAAAAATCGCTTAAGATTTCTGATTTGGATATAACGGCTGACGGGGAAGAGATTATAAGTATCTGTAAACCCAATACAGTATTGCTGTTCAATAAAGAAACAAAGGATGAGAGGTTTATTGAAGAGCGCCAAACAATAACTTCTTTTTCTTTGTCAAAGGATAATAAATTTTTGTTGGTTAATCTTTTGAACCAAGAAATTAATCTTTGGAATATTGAAGGCGATCCTAAGCTCATTGGGAAGTACAAAGGTCATAGGCGCTCGAGGTTTATTATAAGGTCTTGCTTTGGTGGACTTGAGCAAGCTTTCGTTGCAAGTGGAAGTGAGGATTCACAGGTCTACATATGGCACCGAAGCTCAGGAGAGCCGATAGAGGCACTGCCTGGTCATTCAGGAGCTGTTAATTGTGTGAGCTGGAATCCAGCTAATCCCCACATGTTAGCCTCTGCCAGTGATGACCGTACAATTCGGATATGGGGCCTTAATAGTCTGAATAAAAAGTACCAACATGCGCACAGCAATGGCATCCATTACTGCAATGGAGGAACTTAG
Protein sequence

>Msa1416260

MGGVDDEEPALKRMKVSAKELVGLSNGSSSKEPVGSFSSDSMARLLPSEGDDQVVGSKGVIKRDEFVRIIAKALYSLGYRKSGARLEEESGIPLHSPGVNLFTQQVLDGNWDESVATLRKIGLTDDTIVRSAACLILEQKFFELLNGGKVMEALKTLREEITPLCRDSSRIRELSSCLVSPSPKQDIVKVRSRSKLLEELQKLLPPTVMIPEKRLEHLVEQALTLQLEACPFHNSLDQMSLYSDHHCGKDLIPSRTVQILETHDDEVWFVQFSHNGKYLASASNDQTAIIWEVGVNGVRVKHRLSGHQKPISSVSWSPNDEELLTCGVEESIRRWDVSTGKCLQIYEKAGSGLVSCTWFPSGKHILSGVSDKSICMWELDGKEVESWKGQKSLKISDLDITADGEEIISICKPNTVLLFNKETKDERFIEERQTITSFSLSKDNKFLLVNLLNQEINLWNIEGDPKLIGKYKGHRRSRFIIRSCFGGLEQAFVASGSEDSQVYIWHRSSGEPIEALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLNSLNKKYQHAHSNGIHYCNGGT*