AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0352120


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0352120 MtrunA17_Chr3g0087261 95.303 511 24 0 14 524 1 511 0.0 1008
Msa0352120 MtrunA17_Chr3g0087271 82.617 512 88 1 14 524 1 512 0.0 867
Msa0352120 MtrunA17_Chr6g0482131 56.367 479 203 4 49 522 35 512 0.0 572
Msa0352120 MtrunA17_Chr4g0033311 54.492 512 223 6 20 522 5 515 0.0 564
Msa0352120 MtrunA17_Chr2g0329201 54.672 503 221 5 26 522 6 507 0.0 561
Msa0352120 MtrunA17_Chr4g0033321 53.906 512 228 5 23 527 4 514 0.0 556
Msa0352120 MtrunA17_Chr6g0482081 54.813 509 221 5 20 520 4 511 0.0 556
Msa0352120 MtrunA17_Chr4g0033201 51.267 513 242 5 17 522 1 512 0.0 554
Msa0352120 MtrunA17_Chr4g0033401 53.801 513 228 5 23 527 4 515 0.0 552
Msa0352120 MtrunA17_Chr3g0088441 54.118 510 225 6 21 522 6 514 0.0 549
Msa0352120 MtrunA17_Chr4g0033341 53.981 515 226 7 14 522 34 543 0.0 548
Msa0352120 MtrunA17_Chr2g0329191 54.812 478 213 3 48 522 32 509 0.0 547
Msa0352120 MtrunA17_Chr4g0033271 51.946 514 239 5 14 522 1 511 0.0 544
Msa0352120 MtrunA17_Chr6g0482071 52.941 510 228 6 21 525 14 516 0.0 543
Msa0352120 MtrunA17_Chr4g0033331 54.564 493 218 4 33 520 22 513 0.0 542
Msa0352120 MtrunA17_Chr4g0033191 52.697 482 222 4 46 522 39 519 0.0 541
Msa0352120 MtrunA17_Chr4g0010501 52.941 476 218 2 49 522 23 494 0.0 533
Msa0352120 MtrunA17_Chr2g0329321 50.297 505 219 5 21 522 13 488 1.30e-178 511
Msa0352120 MtrunA17_Chr6g0482941 50.495 505 243 6 22 524 15 514 2.09e-174 501
Msa0352120 MtrunA17_Chr4g0043091 47.809 502 255 4 27 524 7 505 2.41e-174 501
Msa0352120 MtrunA17_Chr6g0482951 50.297 505 244 6 22 524 15 514 1.77e-173 499
Msa0352120 MtrunA17_Chr4g0033261 48.235 510 231 4 21 522 9 493 1.10e-172 496
Msa0352120 MtrunA17_Chr4g0033231 48.133 482 220 3 46 522 37 493 1.13e-166 481
Msa0352120 MtrunA17_Chr5g0430451 48.738 515 227 5 21 522 8 498 1.55e-162 471
Msa0352120 MtrunA17_Chr4g0042171 47.908 478 241 5 49 520 23 498 7.53e-161 467
Msa0352120 MtrunA17_Chr3g0090131 45.380 487 251 6 43 526 14 488 8.90e-156 453
Msa0352120 MtrunA17_Chr4g0074561 46.653 478 244 5 55 524 40 514 2.65e-152 446
Msa0352120 MtrunA17_Chr3g0090111 44.235 477 254 4 51 526 20 485 4.13e-152 444
Msa0352120 MtrunA17_Chr7g0242691 45.365 507 253 9 20 522 9 495 2.50e-151 443
Msa0352120 MtrunA17_Chr2g0288071 45.117 512 269 5 20 527 44 547 4.50e-150 441
Msa0352120 MtrunA17_Chr2g0288021 45.833 480 254 4 49 524 34 511 1.24e-148 436
Msa0352120 MtrunA17_Chr2g0317841 44.864 477 254 5 49 520 31 503 1.34e-148 436
Msa0352120 MtrunA17_Chr4g0006111 45.510 490 225 6 48 522 63 525 3.88e-148 435
Msa0352120 MtrunA17_Chr2g0317821 44.421 475 259 4 49 520 31 503 1.15e-147 434
Msa0352120 MtrunA17_Chr4g0006971 44.748 476 247 7 49 520 26 489 2.92e-147 432
Msa0352120 MtrunA17_Chr4g0074551 44.660 515 271 5 16 526 24 528 3.55e-147 434
Msa0352120 MtrunA17_Chr4g0006131 46.094 512 228 10 32 525 23 504 6.67e-147 431
Msa0352120 MtrunA17_Chr7g0242681 45.791 487 241 12 44 524 33 502 2.59e-144 425
Msa0352120 MtrunA17_Chr1g0195611 43.933 478 244 8 50 520 27 487 2.79e-136 404
Msa0352120 MtrunA17_Chr5g0428831 42.376 505 260 9 22 520 9 488 4.75e-135 401
Msa0352120 MtrunA17_Chr2g0301231 48.325 418 177 7 118 522 1 392 2.20e-127 377
Msa0352120 MtrunA17_Chr1g0195641 45.063 395 200 5 49 437 26 409 1.27e-117 353
Msa0352120 MtrunA17_Chr5g0418871 50.595 336 161 3 71 402 4 338 1.84e-117 350
Msa0352120 MtrunA17_Chr3g0087201 49.394 330 162 2 192 520 17 342 3.52e-116 347
Msa0352120 MtrunA17_Chr7g0234091 41.053 475 260 7 51 522 76 533 1.24e-110 339
Msa0352120 MtrunA17_Chr7g0234111 41.263 475 255 7 51 520 76 531 3.01e-109 335
Msa0352120 MtrunA17_Chr7g0234131 40.842 475 258 8 51 520 76 532 1.39e-108 334
Msa0352120 MtrunA17_Chr7g0230651 43.175 359 184 6 106 460 27 369 1.57e-92 287
Msa0352120 MtrunA17_Chr3g0087191 65.068 146 49 1 48 191 20 165 2.08e-62 202
Msa0352120 MtrunA17_Chr7g0227561 39.098 266 130 4 52 316 48 282 2.06e-59 198
Msa0352120 MtrunA17_Chr7g0236731 44.538 238 116 3 140 371 31 258 1.82e-53 182
Msa0352120 MtrunA17_Chr4g0068871 26.969 419 235 10 114 525 183 537 4.04e-30 124
Msa0352120 MtrunA17_Chr5g0418861 53.012 83 38 1 439 520 8 90 7.84e-23 92.8
Msa0352120 MtrunA17_Chr8g0352881 45.631 103 55 1 273 375 57 158 1.54e-22 94.4
Msa0352120 MtrunA17_Chr2g0288031 55.932 59 26 0 201 259 5 63 1.85e-17 76.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0352120 AT2G44480.3 54.622 476 213 2 48 520 64 539 0.0 557
Msa0352120 AT2G44480.1 54.622 476 213 2 48 520 33 508 0.0 556
Msa0352120 AT2G44450.1 51.760 483 226 3 45 524 26 504 2.13e-179 514
Msa0352120 AT5G44640.1 49.603 504 246 4 25 524 6 505 4.24e-179 513
Msa0352120 AT5G42260.1 50.403 496 238 4 25 516 6 497 1.05e-177 510
Msa0352120 AT3G60130.1 51.546 485 222 7 45 523 25 502 1.65e-171 494
Msa0352120 AT1G26560.1 50.209 478 232 4 48 520 30 506 9.71e-170 490
Msa0352120 AT3G18080.1 49.896 479 230 5 48 522 37 509 5.42e-167 483
Msa0352120 AT5G54570.1 49.582 478 234 4 49 520 29 505 6.79e-167 483
Msa0352120 AT2G25630.1 47.695 499 235 6 30 524 10 486 1.06e-165 479
Msa0352120 AT3G18070.1 48.041 485 240 6 44 524 24 500 2.74e-163 473
Msa0352120 AT3G18070.3 47.835 485 235 6 44 524 24 494 6.30e-163 472
Msa0352120 AT2G44480.2 53.448 406 186 2 118 520 1 406 3.66e-162 467
Msa0352120 AT5G24550.1 47.609 481 243 7 50 522 32 511 4.31e-159 464
Msa0352120 AT1G61820.1 47.280 478 246 4 48 520 28 504 6.28e-156 455
Msa0352120 AT1G47600.2 46.465 495 249 7 34 522 26 510 1.53e-155 454
Msa0352120 AT1G47600.1 46.667 495 249 8 34 522 26 511 9.79e-155 452
Msa0352120 AT3G60140.1 46.778 481 248 6 49 522 25 504 6.56e-154 452
Msa0352120 AT1G51470.1 46.465 495 250 8 34 522 26 511 1.94e-152 446
Msa0352120 AT5G24540.1 47.817 481 242 7 50 522 32 511 3.89e-151 443
Msa0352120 AT2G32860.2 47.257 474 241 7 55 520 99 571 3.10e-149 441
Msa0352120 AT1G02850.2 45.208 480 243 7 50 525 26 489 4.85e-148 434
Msa0352120 AT2G44470.3 44.112 501 271 8 30 522 8 507 6.36e-148 437
Msa0352120 AT3G60120.1 45.979 485 253 8 45 522 9 491 1.00e-147 435
Msa0352120 AT5G25980.2 45.898 512 255 12 25 520 17 522 1.49e-147 434
Msa0352120 AT2G32860.1 46.934 473 243 7 55 520 99 570 2.93e-147 436
Msa0352120 AT1G61810.1 43.676 506 276 5 20 520 6 507 7.46e-146 429
Msa0352120 AT5G54570.3 48.821 424 211 3 49 467 29 451 2.14e-144 423
Msa0352120 AT3G60130.2 51.435 418 190 7 112 523 40 450 4.71e-144 422
Msa0352120 AT5G26000.1 46.109 514 255 12 21 520 6 511 5.02e-144 425
Msa0352120 AT2G44490.1 44.399 491 260 9 40 520 5 492 1.21e-143 425
Msa0352120 AT1G02850.5 43.340 503 242 8 50 525 26 512 3.46e-143 422
Msa0352120 AT5G36890.2 43.975 473 252 5 51 520 17 479 3.46e-142 419
Msa0352120 AT5G36890.1 43.975 473 252 5 51 520 17 479 4.16e-142 419
Msa0352120 AT5G54570.2 49.633 409 199 4 118 520 1 408 5.21e-142 416
Msa0352120 AT1G61810.3 45.238 462 247 4 51 507 34 494 1.48e-141 419
Msa0352120 AT1G02850.4 43.254 504 242 9 50 525 26 513 2.27e-141 418
Msa0352120 AT4G21760.2 41.714 525 285 8 6 524 16 525 3.75e-141 418
Msa0352120 AT1G66280.1 43.836 511 274 9 21 523 8 513 1.64e-139 413
Msa0352120 AT4G27830.1 42.012 507 263 10 22 520 1 484 2.38e-139 412
Msa0352120 AT2G44460.1 44.711 501 264 9 30 520 7 504 5.98e-139 414
Msa0352120 AT2G44480.4 61.538 312 117 2 48 357 64 374 3.19e-138 405
Msa0352120 AT4G27820.1 44.167 480 241 8 49 520 22 482 4.24e-137 406
Msa0352120 AT3G03640.1 43.922 510 271 9 22 522 11 514 5.76e-137 407
Msa0352120 AT3G60130.3 50.239 418 184 8 112 523 40 439 7.39e-137 404
Msa0352120 AT1G66270.1 44.330 485 256 9 48 523 34 513 2.82e-136 405
Msa0352120 AT3G21370.1 42.593 486 265 9 49 523 32 514 4.48e-136 404
Msa0352120 AT1G02850.1 43.333 480 225 8 50 525 26 462 1.74e-135 401
Msa0352120 AT1G75940.1 44.033 486 258 9 50 523 37 520 4.65e-135 402
Msa0352120 AT4G22100.1 43.882 474 248 6 51 520 23 482 6.46e-135 401
Msa0352120 AT1G45191.6 44.239 486 243 9 50 524 29 497 5.71e-134 399
Msa0352120 AT4G21760.1 40.762 525 280 9 6 524 16 515 7.83e-134 399
Msa0352120 AT3G09260.1 42.430 502 278 9 29 523 16 513 9.43e-134 399
Msa0352120 AT1G66270.2 44.124 485 255 10 48 523 34 511 2.94e-133 397
Msa0352120 AT1G45191.1 43.813 493 247 9 50 524 29 509 5.59e-133 397
Msa0352120 AT1G45191.4 43.802 484 237 9 50 524 29 486 6.65e-133 395
Msa0352120 AT1G45191.2 44.215 484 241 9 50 524 29 492 6.76e-133 396
Msa0352120 AT3G62750.2 41.061 509 262 10 18 520 23 499 1.79e-131 392
Msa0352120 AT3G62750.1 41.600 500 253 10 27 520 7 473 2.09e-131 392
Msa0352120 AT1G60090.2 43.933 478 242 8 50 520 24 482 2.15e-131 392
Msa0352120 AT1G60090.1 42.827 481 250 6 50 520 24 489 3.75e-131 391
Msa0352120 AT5G25980.3 45.295 457 230 10 25 467 17 467 1.52e-130 388
Msa0352120 AT5G25980.1 45.295 457 230 10 25 467 17 467 1.52e-130 388
Msa0352120 AT1G52400.3 41.860 516 274 10 21 520 10 515 5.21e-130 389
Msa0352120 AT1G52400.1 41.860 516 274 10 21 520 10 515 5.21e-130 389
Msa0352120 AT5G24540.2 47.642 424 214 6 50 466 32 454 1.70e-128 382
Msa0352120 AT5G28510.1 39.844 512 294 8 24 523 13 522 1.66e-127 383
Msa0352120 AT5G26000.2 45.534 459 230 10 21 467 6 456 3.21e-126 377
Msa0352120 AT2G44450.2 50.420 357 172 2 169 524 1 353 4.62e-124 367
Msa0352120 AT2G44470.1 42.793 444 246 7 30 466 8 450 5.86e-124 371
Msa0352120 AT1G61810.5 44.938 405 217 4 121 520 4 407 1.14e-122 366
Msa0352120 AT1G02850.3 44.363 408 192 5 50 431 26 424 6.18e-122 365
Msa0352120 AT1G61810.4 44.604 417 223 4 20 431 6 419 7.36e-122 364
Msa0352120 AT3G60140.2 46.272 389 202 5 49 431 25 412 5.44e-121 363
Msa0352120 AT3G18070.4 50.291 344 162 4 44 383 24 362 4.27e-120 358
Msa0352120 AT3G62740.1 39.623 477 263 8 49 520 22 478 3.97e-119 360
Msa0352120 AT3G62750.4 40.919 457 233 9 18 469 23 447 4.90e-116 351
Msa0352120 AT4G27830.2 42.195 410 216 7 118 520 1 396 9.25e-115 346
Msa0352120 AT1G61820.3 46.556 363 189 3 162 520 4 365 4.40e-113 340
Msa0352120 AT4G27820.2 43.137 408 210 7 121 520 4 397 7.16e-111 336
Msa0352120 AT4G27820.3 43.137 408 210 7 121 520 4 397 7.16e-111 336
Msa0352120 AT1G52400.2 40.998 461 247 9 21 466 10 460 8.91e-110 335
Msa0352120 AT2G44470.2 47.353 340 173 5 30 364 8 346 1.46e-109 332
Msa0352120 AT1G45191.3 45.902 366 178 4 50 405 29 384 2.08e-108 330
Msa0352120 AT5G48375.1 39.752 483 223 9 34 513 22 439 5.71e-108 329
Msa0352120 AT1G45191.5 46.974 347 172 2 50 389 29 370 2.15e-107 327
Msa0352120 AT3G62740.2 42.377 387 205 6 49 431 22 394 9.19e-107 326
Msa0352120 AT1G60270.1 46.647 343 176 2 50 389 24 362 8.11e-106 322
Msa0352120 AT3G62750.7 43.396 371 185 5 27 392 7 357 2.01e-105 320
Msa0352120 AT3G62750.8 43.396 371 185 5 27 392 7 357 2.01e-105 320
Msa0352120 AT3G62750.6 41.076 409 214 8 118 520 1 388 1.81e-104 319
Msa0352120 AT3G62750.5 41.076 409 214 8 118 520 1 388 1.81e-104 319
Msa0352120 AT2G44480.5 48.837 301 153 1 221 520 2 302 2.36e-104 315
Msa0352120 AT3G62750.3 43.011 372 188 5 18 384 23 375 2.77e-104 320
Msa0352120 AT3G18070.2 47.164 335 168 4 194 524 94 423 3.53e-104 319
Msa0352120 AT3G18070.2 52.174 69 32 1 44 112 24 91 6.57e-14 74.3
Msa0352120 AT3G18070.7 46.835 316 159 4 213 524 1 311 6.41e-97 296
Msa0352120 AT1G61810.2 51.311 267 129 1 51 316 34 300 1.98e-94 290
Msa0352120 AT2G44460.2 45.000 360 190 6 167 520 1 358 3.05e-94 294
Msa0352120 AT1G51490.1 44.509 346 167 9 58 394 28 357 3.24e-88 278
Msa0352120 AT1G60270.2 47.253 273 141 1 120 389 3 275 3.69e-84 263
Msa0352120 AT3G18070.5 48.148 243 120 2 194 432 94 334 1.25e-74 240
Msa0352120 AT3G18070.5 52.174 69 32 1 44 112 24 91 3.37e-14 74.3
Msa0352120 AT3G18070.6 47.768 224 111 2 213 432 1 222 1.89e-67 218
Msa0352120 AT5G16580.1 39.583 288 155 5 194 477 27 299 8.11e-57 192
Msa0352120 AT3G06510.1 26.977 430 235 13 107 525 153 514 2.69e-28 119
Msa0352120 AT3G06510.2 26.067 445 254 15 107 525 153 548 8.02e-25 108

Find 119 sgRNAs with CRISPR-Local

Find 322 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAACAAAGATATCATAATT+TGG 0.153192 3_1:+19889509 None:intergenic
GCCATTAAGCATTACATAAT+TGG 0.185949 3_1:+19887695 None:intergenic
ACCAATTATGTAATGCTTAA+TGG 0.213587 3_1:-19887696 Msa0352120:three_prime_UTR
CCAGTGTACATTACTGAAAA+TGG 0.258317 3_1:-19888784 Msa0352120:intron
CTCAAGGTGGTGAAAGAAAT+TGG 0.260524 3_1:-19891919 Msa0352120:CDS
AGAGAAAATCATGAGGAAAA+AGG 0.269873 3_1:+19893356 None:intergenic
TTGGTTGAGCAGATAAGATT+TGG 0.275910 3_1:-19892105 Msa0352120:intron
TTTGATTCTCTAGCAACTTA+AGG 0.279204 3_1:-19887620 Msa0352120:three_prime_UTR
AGCTCTTGAAGATGAATATA+AGG 0.279995 3_1:-19891145 Msa0352120:CDS
ATGGGAGGGGACCAAGTATA+TGG 0.281964 3_1:-19892443 Msa0352120:CDS
CAATAGTGTTGCTGATAAAA+AGG 0.286184 3_1:-19889987 Msa0352120:CDS
CAACAAAGATATCATAATTT+GGG 0.295754 3_1:+19889510 None:intergenic
TCAGCAACACTATTGGAATA+TGG 0.298995 3_1:+19889995 None:intergenic
AGATGTCACTACTTCATCTT+TGG 0.306241 3_1:-19893516 Msa0352120:CDS
CCAAATTATGATATCTTTGT+TGG 0.310176 3_1:-19889509 Msa0352120:CDS
CCATTGATGGTGTATGAATA+AGG 0.315978 3_1:+19890827 None:intergenic
GGTAGTGGAGATGGTCATTA+TGG 0.318482 3_1:+19888573 None:intergenic
TTCCTATGTATTGAGATAAT+TGG 0.329047 3_1:-19887723 Msa0352120:three_prime_UTR
CCTTTGTAACTCTCTTTCAT+TGG 0.333579 3_1:-19891179 Msa0352120:CDS
GAAGGAGCTTCAGATATAGA+TGG 0.339718 3_1:-19892462 Msa0352120:CDS
GCTTCAAGACATTTGGAGAT+AGG 0.339805 3_1:-19890877 Msa0352120:CDS
TACACCATCAATGGATATAA+TGG 0.360639 3_1:-19890818 Msa0352120:CDS
GTGTCATAGGCTCATCAAAA+AGG 0.361616 3_1:-19890055 Msa0352120:intron
CTTTGTAACTCTCTTTCATT+GGG 0.363734 3_1:-19891178 Msa0352120:CDS
TAGCTCGTAAAGATGGTATT+AGG 0.367113 3_1:-19888604 Msa0352120:CDS
TTGATTCTCTAGCAACTTAA+GGG 0.369888 3_1:-19887619 Msa0352120:three_prime_UTR
ACTCATACTTTATTCCTTCA+AGG 0.387045 3_1:+19888549 None:intergenic
AATTGGTTCTTCTGCTTACC+AGG 0.392026 3_1:-19893329 Msa0352120:intron
AGTATACAAGAGAAAATATC+AGG 0.393019 3_1:-19890675 Msa0352120:intron
GTTATAGAATTTCACTCCTA+AGG 0.398406 3_1:+19891351 None:intergenic
GTCAATATGCTTCATTCAAT+AGG 0.402198 3_1:-19893381 Msa0352120:CDS
TCAGTTCTGTCATTTAATCA+TGG 0.402494 3_1:+19893573 None:intergenic
TGGAGATAGGGTTAAGCATT+GGG 0.413839 3_1:-19890864 Msa0352120:CDS
ATTCACACCAAGAAAATCAT+AGG 0.423764 3_1:+19889435 None:intergenic
GCAGGGTACACAGTACGATT+TGG 0.425268 3_1:-19887917 Msa0352120:CDS
AATATCAATAAATAAATTGT+TGG 0.429504 3_1:-19887653 Msa0352120:three_prime_UTR
CTTCAAGACATTTGGAGATA+GGG 0.430530 3_1:-19890876 Msa0352120:CDS
TGGTTGAGCAGATAAGATTT+GGG 0.433770 3_1:-19892104 Msa0352120:intron
GCCACCATTATATCCATTGA+TGG 0.437848 3_1:+19890814 None:intergenic
TTTCAGGCATTGCTACATAT+AGG 0.439893 3_1:-19888649 Msa0352120:intron
CAAATTATGATATCTTTGTT+GGG 0.440379 3_1:-19889508 Msa0352120:CDS
TTGAAGAATGGTGTATCTAT+TGG 0.446784 3_1:-19889223 Msa0352120:CDS
GCTCTTGAAGATGAATATAA+GGG 0.448342 3_1:-19891144 Msa0352120:CDS
TTTGCTCATCCCATTACATA+TGG 0.451264 3_1:-19889541 Msa0352120:CDS
ACAAGATCATGAATTCCCTT+TGG 0.455790 3_1:+19888838 None:intergenic
GGTGGTGAAAGAAATTGGTT+TGG 0.457204 3_1:-19891914 Msa0352120:CDS
TTATTCCTTCAAGGAGGTAG+TGG 0.457529 3_1:+19888558 None:intergenic
TTTGCAGCCATGGGAGCTAT+AGG 0.460190 3_1:-19893484 Msa0352120:CDS
CCTTATTCATACACCATCAA+TGG 0.460986 3_1:-19890827 Msa0352120:CDS
GACAGCTATGAATGGGATGC+AGG 0.461053 3_1:-19887935 Msa0352120:CDS
TTGGAGATAGGGTTAAGCAT+TGG 0.464172 3_1:-19890865 Msa0352120:CDS
ACGATTTGGAATAATTTATG+TGG 0.469400 3_1:-19887903 Msa0352120:CDS
CAGTTCTGTCATTTAATCAT+GGG 0.469451 3_1:+19893574 None:intergenic
GTCAATGTAGCTCGTAAAGA+TGG 0.471396 3_1:-19888611 Msa0352120:CDS
TCTTTACGAGCTACATTGAC+TGG 0.472609 3_1:+19888614 None:intergenic
GTGAATGTGTCCCATATACT+TGG 0.475650 3_1:+19892432 None:intergenic
CATCTCCACTACCTCCTTGA+AGG 0.477901 3_1:-19888563 Msa0352120:CDS
TTCCAGTGACAACAGCCAAA+AGG 0.487795 3_1:+19893428 None:intergenic
GGGATAGTGACCATATGTAA+TGG 0.489610 3_1:+19889531 None:intergenic
GGTAGATGCTCTAAATATGT+TGG 0.494224 3_1:-19890779 Msa0352120:CDS
ATTCATCTTCAAGAGCTTGT+GGG 0.498399 3_1:+19891151 None:intergenic
TTATAGAATTTCACTCCTAA+GGG 0.499133 3_1:+19891352 None:intergenic
TATTCATCTTCAAGAGCTTG+TGG 0.500590 3_1:+19891150 None:intergenic
GCTGCAAAAGTTCCTTCTCA+AGG 0.500855 3_1:-19887834 Msa0352120:CDS
AAGTTATGAGCAACAATGTA+GGG 0.502836 3_1:+19890725 None:intergenic
TGGGAGGGGACCAAGTATAT+GGG 0.502889 3_1:-19892442 Msa0352120:CDS
TCCAGTGACAACAGCCAAAA+GGG 0.503504 3_1:+19893429 None:intergenic
ATTAATGAGATCCTTGCAAA+TGG 0.508823 3_1:-19891322 Msa0352120:intron
TATGTTGGAAATTGTACTAC+TGG 0.509696 3_1:-19890764 Msa0352120:CDS
TTATGCAGACTGATTTGACT+TGG 0.511582 3_1:-19888873 Msa0352120:intron
CAAGTTATGAGCAACAATGT+AGG 0.512417 3_1:+19890724 None:intergenic
AGTAAATACTAAGGTGACAT+TGG 0.517403 3_1:+19887750 None:intergenic
GATATCACAATTTGCAGCCA+TGG 0.521223 3_1:-19893494 Msa0352120:CDS
AAGGAGCTTCAGATATAGAT+GGG 0.521400 3_1:-19892461 Msa0352120:CDS
TGGTGTATCTATTGGTCCCT+CGG 0.524206 3_1:-19889215 Msa0352120:intron
TGGTCAAATAAGTGATATCA+AGG 0.528091 3_1:-19887589 Msa0352120:three_prime_UTR
GGATAGTGACCATATGTAAT+GGG 0.531216 3_1:+19889532 None:intergenic
AGCTTCAGATATAGATGGGA+GGG 0.538873 3_1:-19892457 Msa0352120:CDS
TTCAAAGAAGTGAGTCACTA+AGG 0.542315 3_1:+19890018 None:intergenic
TGGCTCTATGTCTATCCAAA+GGG 0.545375 3_1:-19888853 Msa0352120:CDS
ATGTGAAGGGCTACTATGCT+TGG 0.546370 3_1:-19887967 Msa0352120:CDS
ATATCACAATTTGCAGCCAT+GGG 0.552542 3_1:-19893493 Msa0352120:CDS
CTTCAAGGAGGTAGTGGAGA+TGG 0.557183 3_1:+19888564 None:intergenic
TTGAATGAAGCATATTGACT+TGG 0.557314 3_1:+19893385 None:intergenic
ACATATTTAGAGCATCTACC+AGG 0.559499 3_1:+19890782 None:intergenic
TTGATCACAGCATTGAAGAA+TGG 0.563467 3_1:-19889235 Msa0352120:intron
CTGCAAAAGTTCCTTCTCAA+GGG 0.565586 3_1:-19887833 Msa0352120:CDS
GATATCATATGCAGAGGGCA+AGG 0.565708 3_1:-19891386 Msa0352120:intron
GAATATTCTTGACCATGAGA+TGG 0.567125 3_1:+19891876 None:intergenic
GGAAGGACCTATAGCTCCCA+TGG 0.567501 3_1:+19893477 None:intergenic
CTCCTACATTACCACTGCTA+TGG 0.568763 3_1:+19892080 None:intergenic
ATATCATATGCAGAGGGCAA+GGG 0.568782 3_1:-19891385 Msa0352120:intron
TTGGCTCTATGTCTATCCAA+AGG 0.570642 3_1:-19888854 Msa0352120:CDS
CCAATGAAAGAGAGTTACAA+AGG 0.573192 3_1:+19891179 None:intergenic
TGCATCCCATTCATAGCTGT+CGG 0.573399 3_1:+19887937 None:intergenic
CAATTTCTTTCACCACCTTG+AGG 0.574734 3_1:+19891920 None:intergenic
AGGAACGCAAGTAAATACTA+AGG 0.575832 3_1:+19887741 None:intergenic
ACATTCACTAAACAAAATCC+AGG 0.587307 3_1:-19892417 Msa0352120:intron
TATCATATGCAGAGGGCAAG+GGG 0.588157 3_1:-19891384 Msa0352120:intron
CATACAGATTCTCCATCTCA+TGG 0.592212 3_1:-19891888 Msa0352120:CDS
GCTTCAGATATAGATGGGAG+GGG 0.594992 3_1:-19892456 Msa0352120:CDS
GACCATAGCAGTGGTAATGT+AGG 0.599218 3_1:-19892082 Msa0352120:CDS
CAATGAAAGAGAGTTACAAA+GGG 0.601814 3_1:+19891180 None:intergenic
CTTGAAGCAAAAGTCAGCAT+AGG 0.616391 3_1:+19890892 None:intergenic
TGATTCTCTAGCAACTTAAG+GGG 0.617118 3_1:-19887618 Msa0352120:three_prime_UTR
CAGAGATGGTGCAAATGTGA+AGG 0.618511 3_1:-19887981 Msa0352120:CDS
GATTCTCTAGCAACTTAAGG+GGG 0.619826 3_1:-19887617 Msa0352120:three_prime_UTR
AACAAAGATATCATAATTTG+GGG 0.628062 3_1:+19889511 None:intergenic
CACCAATTATCTCAATACAT+AGG 0.630847 3_1:+19887721 None:intergenic
ACAGCTATGAATGGGATGCA+GGG 0.632968 3_1:-19887934 Msa0352120:CDS
ACCATCAATGGATATAATGG+TGG 0.645165 3_1:-19890815 Msa0352120:CDS
GAGCTTCAGATATAGATGGG+AGG 0.659453 3_1:-19892458 Msa0352120:CDS
ACTGCTTTGTGCATAATATG+TGG 0.670752 3_1:+19889405 None:intergenic
CATACTTTATTCCTTCAAGG+AGG 0.672177 3_1:+19888552 None:intergenic
ATTCCAAAGAGAAAATCATG+AGG 0.675686 3_1:+19893349 None:intergenic
AAGATTTGGGACCATAGCAG+TGG 0.678867 3_1:-19892091 Msa0352120:CDS
AGAGATGGTGCAAATGTGAA+GGG 0.682450 3_1:-19887980 Msa0352120:CDS
ATCATATGCAGAGGGCAAGG+GGG 0.702617 3_1:-19891383 Msa0352120:intron
TTTGTAGGAAGACCTCAAGG+TGG 0.734404 3_1:-19891932 Msa0352120:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAAATCTAAAAATAAGT+TGG - chr3_1:19888462-19888481 Msa0352120:intron 10.0%
!! AAATCAATGAAAAATAAATA+GGG + chr3_1:19888764-19888783 None:intergenic 10.0%
!!! AAAAATTGTTTTATTTGTAA+AGG + chr3_1:19890081-19890100 None:intergenic 10.0%
!! AATATCAATAAATAAATTGT+TGG - chr3_1:19893499-19893518 Msa0352120:CDS 10.0%
!! TCTATATAAAGCAAAAAAAT+GGG + chr3_1:19887619-19887638 None:intergenic 15.0%
!! ATCTATATAAAGCAAAAAAA+TGG + chr3_1:19887620-19887639 None:intergenic 15.0%
!! AAAATAAATATACTATGTAG+TGG + chr3_1:19887855-19887874 None:intergenic 15.0%
!!! AGTATATTTATTTTGTTACA+TGG - chr3_1:19887861-19887880 Msa0352120:CDS 15.0%
!!! TTTTTTTTTAAGAAGCTAAA+AGG - chr3_1:19888268-19888287 Msa0352120:intron 15.0%
!! CAAATCAATGAAAAATAAAT+AGG + chr3_1:19888765-19888784 None:intergenic 15.0%
!!! CTATTTATTTTTCATTGATT+TGG - chr3_1:19888763-19888782 Msa0352120:intron 15.0%
!! TTTACTTATAAATAGTTTAC+CGG - chr3_1:19888799-19888818 Msa0352120:CDS 15.0%
!!! ATAAACTTCAATTATTTTGT+AGG - chr3_1:19889205-19889224 Msa0352120:intron 15.0%
!! ACAAAAATCAAAATAATAGA+GGG - chr3_1:19889621-19889640 Msa0352120:intron 15.0%
!!! TCATAAAATTTGTTAAAAAG+TGG - chr3_1:19889684-19889703 Msa0352120:intron 15.0%
!! AATGAAATAAAAAAGTTAGT+AGG - chr3_1:19890110-19890129 Msa0352120:intron 15.0%
!!! ATTAATTTAATGGATAAAAC+AGG - chr3_1:19890224-19890243 Msa0352120:intron 15.0%
!! TATTAAATAATTGATGTATC+AGG - chr3_1:19890608-19890627 Msa0352120:intron 15.0%
!!! CAATTTTTGAAATTTATGTT+TGG - chr3_1:19891075-19891094 Msa0352120:intron 15.0%
!!! ACCGAATTTTATTTTTTAAA+TGG - chr3_1:19891401-19891420 Msa0352120:intron 15.0%
!! GCCATTTAAAAAATAAAATT+CGG + chr3_1:19891405-19891424 None:intergenic 15.0%
!!! TATTAATGTTTTTTTTTTCC+AGG - chr3_1:19891588-19891607 Msa0352120:intron 15.0%
!! AGATTACAATATATTTATTG+TGG + chr3_1:19892140-19892159 None:intergenic 15.0%
!!! TTGTTTTATGAATATTTTTC+AGG - chr3_1:19892487-19892506 Msa0352120:intron 15.0%
!! ATATTTAATCAAGAGTTTAA+TGG - chr3_1:19892653-19892672 Msa0352120:intron 15.0%
!! GTTAAACAATAATAATAGTT+AGG - chr3_1:19892795-19892814 Msa0352120:intron 15.0%
!! TTAATACATATTCCAACATA+AGG - chr3_1:19887940-19887959 Msa0352120:CDS 20.0%
!! TAATACATATTCCAACATAA+GGG - chr3_1:19887941-19887960 Msa0352120:CDS 20.0%
!!! AAAAATAGATCTAACGTTTT+TGG - chr3_1:19888028-19888047 Msa0352120:intron 20.0%
!! ACAAATTATTCTTTACAGTA+TGG - chr3_1:19888065-19888084 Msa0352120:intron 20.0%
!! CAAATTATTCTTTACAGTAT+GGG - chr3_1:19888066-19888085 Msa0352120:intron 20.0%
!! TTACTTGAATATTTGTTTCA+AGG + chr3_1:19888526-19888545 None:intergenic 20.0%
!! CATAAACATTTGATATATGT+AGG + chr3_1:19888889-19888908 None:intergenic 20.0%
!!! TATTATGAGGTAATTTTTGT+TGG - chr3_1:19888932-19888951 Msa0352120:intron 20.0%
!! AATTAAATTTCTCTCTATCT+TGG - chr3_1:19889028-19889047 Msa0352120:intron 20.0%
!!! ATATCTTTGTTATCTTACTT+GGG + chr3_1:19889301-19889320 None:intergenic 20.0%
!!! ACAAAGATATCCTTTTTTTT+AGG - chr3_1:19889311-19889330 Msa0352120:intron 20.0%
!!! CAAAGATATCCTTTTTTTTA+GGG - chr3_1:19889312-19889331 Msa0352120:intron 20.0%
!!! AAAGATATCCTTTTTTTTAG+GGG - chr3_1:19889313-19889332 Msa0352120:intron 20.0%
!!! GACAATCATAATTTTACAAA+GGG - chr3_1:19889584-19889603 Msa0352120:intron 20.0%
!!! ATAATTTTACAAAGGGAAAA+AGG - chr3_1:19889591-19889610 Msa0352120:intron 20.0%
!! CACAAAAATCAAAATAATAG+AGG - chr3_1:19889620-19889639 Msa0352120:intron 20.0%
!! ACGATGCATTATAATATAAT+CGG + chr3_1:19890153-19890172 None:intergenic 20.0%
!! TATATATTGCACAAACAAAT+GGG - chr3_1:19890532-19890551 Msa0352120:intron 20.0%
!! TTGTTTATAAATGTGATCAA+AGG - chr3_1:19890685-19890704 Msa0352120:CDS 20.0%
!! TTTCAAATATCATCTTAACT+AGG + chr3_1:19890804-19890823 None:intergenic 20.0%
!! CAATATTAATTATTGGAATG+TGG + chr3_1:19890839-19890858 None:intergenic 20.0%
!! TCGTCAACAATATTAATTAT+TGG + chr3_1:19890846-19890865 None:intergenic 20.0%
!! TTAAGAGAAAAAAGTTTATG+TGG - chr3_1:19890915-19890934 Msa0352120:intron 20.0%
!! TTACCAAATGTAATATTAGT+TGG + chr3_1:19890989-19891008 None:intergenic 20.0%
!!! AATTTTGAGTACTTGTTTAT+AGG - chr3_1:19891531-19891550 Msa0352120:intron 20.0%
!! AACAAAGATATCATAATTTG+GGG + chr3_1:19891644-19891663 None:intergenic 20.0%
!! CAACAAAGATATCATAATTT+GGG + chr3_1:19891645-19891664 None:intergenic 20.0%
!! CAAATTATGATATCTTTGTT+GGG - chr3_1:19891644-19891663 Msa0352120:intron 20.0%
!!! CAATTTAAATTTTCGATCTA+TGG + chr3_1:19892053-19892072 None:intergenic 20.0%
!!! AACAATATCATACAATGTTT+TGG - chr3_1:19892217-19892236 Msa0352120:intron 20.0%
!!! ACAATATCATACAATGTTTT+GGG - chr3_1:19892218-19892237 Msa0352120:intron 20.0%
!! AGCATAATATAATTAGACAA+AGG + chr3_1:19892697-19892716 None:intergenic 20.0%
!! ATTCACAACAAATATTTACT+CGG - chr3_1:19892749-19892768 Msa0352120:intron 20.0%
!! ATTGGAAATTTGAAAAACAA+GGG + chr3_1:19893387-19893406 None:intergenic 20.0%
! CAGAACTGATTAAAAAATCA+TGG - chr3_1:19887593-19887612 Msa0352120:three_prime_UTR 25.0%
! TAGAGAAAAAAGATAGAGAA+GGG + chr3_1:19887699-19887718 None:intergenic 25.0%
! ACAAAATAAGAAGTGAGTAA+TGG + chr3_1:19887921-19887940 None:intergenic 25.0%
!! TTACTATTTGAACTTGTTCA+TGG - chr3_1:19887988-19888007 Msa0352120:intron 25.0%
! TACATTAAAGATTGCAACAT+AGG + chr3_1:19888242-19888261 None:intergenic 25.0%
!!! ATATTTTAAAGCCGTTTTGT+TGG + chr3_1:19888403-19888422 None:intergenic 25.0%
! ATTAGCACAACAAAAAGAAA+TGG + chr3_1:19888660-19888679 None:intergenic 25.0%
!!! TTTTGTTGTGCTAATTTTTC+AGG - chr3_1:19888665-19888684 Msa0352120:intron 25.0%
!! TGATTTTTATCATCGATACA+AGG - chr3_1:19889096-19889115 Msa0352120:intron 25.0%
!! GATATCTTTGTTATCTTACT+TGG + chr3_1:19889302-19889321 None:intergenic 25.0%
!!! AGGACAAATTCATTTTTGTT+GGG + chr3_1:19889439-19889458 None:intergenic 25.0%
!!! AAGGACAAATTCATTTTTGT+TGG + chr3_1:19889440-19889459 None:intergenic 25.0%
! TTAGTGACAAGAGATATTTA+AGG + chr3_1:19889459-19889478 None:intergenic 25.0%
!! GGACAATCATAATTTTACAA+AGG - chr3_1:19889583-19889602 Msa0352120:intron 25.0%
! TTATAGAATTTCACTCCTAA+GGG + chr3_1:19889803-19889822 None:intergenic 25.0%
!!! AACTCATTTTTTTGCTTACA+TGG - chr3_1:19889935-19889954 Msa0352120:intron 25.0%
! GTAAAGGAATTAAGTTACTA+GGG + chr3_1:19890065-19890084 None:intergenic 25.0%
! TGTAAAGGAATTAAGTTACT+AGG + chr3_1:19890066-19890085 None:intergenic 25.0%
! GATGCATTATAATATAATCG+GGG + chr3_1:19890151-19890170 None:intergenic 25.0%
! CGATGCATTATAATATAATC+GGG + chr3_1:19890152-19890171 None:intergenic 25.0%
!!! TATATTAACTTGTTCATGTG+AGG + chr3_1:19890194-19890213 None:intergenic 25.0%
!! ATTTAATGGATAAAACAGGA+AGG - chr3_1:19890228-19890247 Msa0352120:intron 25.0%
! AGTATACAAGAGAAAATATC+AGG - chr3_1:19890477-19890496 Msa0352120:intron 25.0%
! AAGAGAAAATATCAGGTAAT+TGG - chr3_1:19890484-19890503 Msa0352120:intron 25.0%
! CTATATATTGCACAAACAAA+TGG - chr3_1:19890531-19890550 Msa0352120:intron 25.0%
! ATATATTGCACAAACAAATG+GGG - chr3_1:19890533-19890552 Msa0352120:intron 25.0%
! CGATCAATCATTATCAATTA+TGG - chr3_1:19890863-19890882 Msa0352120:CDS 25.0%
! TGACCAACTAATATTACATT+TGG - chr3_1:19890983-19891002 Msa0352120:intron 25.0%
!!! AAATTTATGTTTGGTGTCAT+AGG - chr3_1:19891084-19891103 Msa0352120:intron 25.0%
! CATAAAAAATCTACTTGAGT+TGG - chr3_1:19891281-19891300 Msa0352120:intron 25.0%
! TTTAAAAGTAGAGTAAAGTG+GGG + chr3_1:19891327-19891346 None:intergenic 25.0%
! GTTTAAAAGTAGAGTAAAGT+GGG + chr3_1:19891328-19891347 None:intergenic 25.0%
!!! CACTTTACTCTACTTTTAAA+CGG - chr3_1:19891327-19891346 Msa0352120:CDS 25.0%
!!! ACTTTACTCTACTTTTAAAC+GGG - chr3_1:19891328-19891347 Msa0352120:CDS 25.0%
! CCAACAAAGATATCATAATT+TGG + chr3_1:19891646-19891665 None:intergenic 25.0%
! CCAAATTATGATATCTTTGT+TGG - chr3_1:19891643-19891662 Msa0352120:intron 25.0%
!!! ATTCTAGTTTTGTGAATTTG+GGG + chr3_1:19891679-19891698 None:intergenic 25.0%
!!! GATTCTAGTTTTGTGAATTT+GGG + chr3_1:19891680-19891699 None:intergenic 25.0%
!!! AGATTCTAGTTTTGTGAATT+TGG + chr3_1:19891681-19891700 None:intergenic 25.0%
!! AAAGATTCCTATGATTTTCT+TGG - chr3_1:19891710-19891729 Msa0352120:intron 25.0%
! TGATCAAGTGAAAAATGTAA+TGG + chr3_1:19891904-19891923 None:intergenic 25.0%
! GAAAAAAAAAATCATACCGA+GGG + chr3_1:19891956-19891975 None:intergenic 25.0%
! ATACTACATTTGTGAAGAAT+CGG + chr3_1:19892013-19892032 None:intergenic 25.0%
! TATATTTATTGTGGCTTCAT+AGG + chr3_1:19892131-19892150 None:intergenic 25.0%
!! TTGTATATGCTATAAGTTGA+TGG + chr3_1:19892965-19892984 None:intergenic 25.0%
! AATAAGTTGTTTATCGAAAC+AGG - chr3_1:19893084-19893103 Msa0352120:intron 25.0%
! CATAATGAATTGATTGAACA+TGG - chr3_1:19893121-19893140 Msa0352120:intron 25.0%
!! ACGATTTGGAATAATTTATG+TGG - chr3_1:19893249-19893268 Msa0352120:intron 25.0%
! CATTGGAAATTTGAAAAACA+AGG + chr3_1:19893388-19893407 None:intergenic 25.0%
! TTCCTATGTATTGAGATAAT+TGG - chr3_1:19893429-19893448 Msa0352120:CDS 25.0%
! ACCAATTATGTAATGCTTAA+TGG - chr3_1:19893456-19893475 Msa0352120:CDS 25.0%
CTAGAGAAAAAAGATAGAGA+AGG + chr3_1:19887700-19887719 None:intergenic 30.0%
! TTGAATGAAGCATATTGACT+TGG + chr3_1:19887770-19887789 None:intergenic 30.0%
GTCAATATGCTTCATTCAAT+AGG - chr3_1:19887771-19887790 Msa0352120:intron 30.0%
AGAGAAAATCATGAGGAAAA+AGG + chr3_1:19887799-19887818 None:intergenic 30.0%
! TTTCCTCATGATTTTCTCTT+TGG - chr3_1:19887800-19887819 Msa0352120:exon 30.0%
ATTCCAAAGAGAAAATCATG+AGG + chr3_1:19887806-19887825 None:intergenic 30.0%
!!! CATGATTTTCTCTTTGGAAT+TGG - chr3_1:19887806-19887825 Msa0352120:exon 30.0%
AGCAAACATTGCAAATAAAC+TGG + chr3_1:19887967-19887986 None:intergenic 30.0%
AAAGTAAATACATGTGCATG+TGG - chr3_1:19888357-19888376 Msa0352120:intron 30.0%
TAACAAACAAGCCAACAAAA+CGG - chr3_1:19888389-19888408 Msa0352120:intron 30.0%
GATCTAAACTTCATTCTTAG+TGG + chr3_1:19888504-19888523 None:intergenic 30.0%
ACATTCACTAAACAAAATCC+AGG - chr3_1:19888735-19888754 Msa0352120:intron 30.0%
GAAAAATAAATAGGGTAACC+TGG + chr3_1:19888756-19888775 None:intergenic 30.0%
! TATGCAACTCTTTTCCTATT+TGG - chr3_1:19888905-19888924 Msa0352120:intron 30.0%
! ATGCAACTCTTTTCCTATTT+GGG - chr3_1:19888906-19888925 Msa0352120:intron 30.0%
!!! TATCCTTTTTTTTAGGGGAA+AGG - chr3_1:19889318-19889337 Msa0352120:intron 30.0%
CCAAAAAGTTGTTTACCAAA+TGG + chr3_1:19889565-19889584 None:intergenic 30.0%
! CCATTTGGTAAACAACTTTT+TGG - chr3_1:19889562-19889581 Msa0352120:intron 30.0%
TCTAATGATATCATATGCAG+AGG - chr3_1:19889760-19889779 Msa0352120:intron 30.0%
CTAATGATATCATATGCAGA+GGG - chr3_1:19889761-19889780 Msa0352120:intron 30.0%
GTTATAGAATTTCACTCCTA+AGG + chr3_1:19889804-19889823 None:intergenic 30.0%
ATTAATGAGATCCTTGCAAA+TGG - chr3_1:19889830-19889849 Msa0352120:intron 30.0%
! AGAGATTTTTACCATTTGCA+AGG + chr3_1:19889844-19889863 None:intergenic 30.0%
AGCAAAAAAATGAGTTCTCA+AGG + chr3_1:19889931-19889950 None:intergenic 30.0%
!!! TCATTTTTTTGCTTACATGG+TGG - chr3_1:19889938-19889957 Msa0352120:intron 30.0%
CAATGAAAGAGAGTTACAAA+GGG + chr3_1:19889975-19889994 None:intergenic 30.0%
CTTTGTAACTCTCTTTCATT+GGG - chr3_1:19889974-19889993 Msa0352120:CDS 30.0%
AGCTCTTGAAGATGAATATA+AGG - chr3_1:19890007-19890026 Msa0352120:CDS 30.0%
GCTCTTGAAGATGAATATAA+GGG - chr3_1:19890008-19890027 Msa0352120:CDS 30.0%
TACACCATCAATGGATATAA+TGG - chr3_1:19890334-19890353 Msa0352120:intron 30.0%
TATGTTGGAAATTGTACTAC+TGG - chr3_1:19890388-19890407 Msa0352120:intron 30.0%
AAGTTATGAGCAACAATGTA+GGG + chr3_1:19890430-19890449 None:intergenic 30.0%
TATTCTCACAACTACAAAGT+GGG + chr3_1:19890948-19890967 None:intergenic 30.0%
ATATTCTCACAACTACAAAG+TGG + chr3_1:19890949-19890968 None:intergenic 30.0%
AATATTAGTTGGTCACATGA+AGG + chr3_1:19890978-19890997 None:intergenic 30.0%
GCTCATCAAAAAGGAAAAAT+TGG - chr3_1:19891106-19891125 Msa0352120:intron 30.0%
! CTTTTTATCAGCAACACTAT+TGG + chr3_1:19891167-19891186 None:intergenic 30.0%
! CAATAGTGTTGCTGATAAAA+AGG - chr3_1:19891165-19891184 Msa0352120:CDS 30.0%
CGTTTAAAAGTAGAGTAAAG+TGG + chr3_1:19891329-19891348 None:intergenic 30.0%
!! CTTTACTCTACTTTTAAACG+GGG - chr3_1:19891329-19891348 Msa0352120:CDS 30.0%
!! AATTCTACCGTCCATTTTTA+AGG + chr3_1:19891356-19891375 None:intergenic 30.0%
ATTCACACCAAGAAAATCAT+AGG + chr3_1:19891720-19891739 None:intergenic 30.0%
!!! TAGTCCATTTCGACATTTTT+TGG + chr3_1:19891776-19891795 None:intergenic 30.0%
TTGAAGAATGGTGTATCTAT+TGG - chr3_1:19891929-19891948 Msa0352120:intron 30.0%
GGAAAAAAAAAATCATACCG+AGG + chr3_1:19891957-19891976 None:intergenic 30.0%
GATCTATGGTGTGAAAAAAT+TGG + chr3_1:19892039-19892058 None:intergenic 30.0%
TCTATATCATAACAAATCGC+TGG - chr3_1:19892096-19892115 Msa0352120:CDS 30.0%
!! TTTGGGTTATTTCTTACCTA+AGG - chr3_1:19892235-19892254 Msa0352120:intron 30.0%
! AAGTTTTGCTTGATTACCTT+AGG + chr3_1:19892254-19892273 None:intergenic 30.0%
! GGTAATCAAGCAAAACTTTT+TGG - chr3_1:19892256-19892275 Msa0352120:intron 30.0%
! TTTTATTAGTCAGTAGAAGC+TGG - chr3_1:19892437-19892456 Msa0352120:CDS 30.0%
ACTCATACTTTATTCCTTCA+AGG + chr3_1:19892606-19892625 None:intergenic 30.0%
! GAACATGGTAGTTAATGTTT+TGG - chr3_1:19893136-19893155 Msa0352120:intron 30.0%
AGTAAATACTAAGGTGACAT+TGG + chr3_1:19893405-19893424 None:intergenic 30.0%
CACCAATTATCTCAATACAT+AGG + chr3_1:19893434-19893453 None:intergenic 30.0%
GCCATTAAGCATTACATAAT+TGG + chr3_1:19893460-19893479 None:intergenic 30.0%
TTTGATTCTCTAGCAACTTA+AGG - chr3_1:19893532-19893551 Msa0352120:exon 30.0%
TTGATTCTCTAGCAACTTAA+GGG - chr3_1:19893533-19893552 Msa0352120:exon 30.0%
TGGTCAAATAAGTGATATCA+AGG - chr3_1:19893563-19893582 Msa0352120:five_prime_UTR 30.0%
AGATGTCACTACTTCATCTT+TGG - chr3_1:19887636-19887655 Msa0352120:three_prime_UTR 35.0%
ATATCACAATTTGCAGCCAT+GGG - chr3_1:19887659-19887678 Msa0352120:three_prime_UTR 35.0%
GAAAAAAGATAGAGAAGGGA+AGG + chr3_1:19887695-19887714 None:intergenic 35.0%
! TTTTTCTCTAGCTACCCTTT+TGG - chr3_1:19887709-19887728 Msa0352120:three_prime_UTR 35.0%
TGTTGCTAATGCTAGCTATA+TGG + chr3_1:19887891-19887910 None:intergenic 35.0%
AAATAAACTGGCCCTTATGT+TGG + chr3_1:19887955-19887974 None:intergenic 35.0%
TATTGCCCTTCTTAATGTTG+TGG - chr3_1:19888165-19888184 Msa0352120:intron 35.0%
CATAGCCACAACATTAAGAA+GGG + chr3_1:19888173-19888192 None:intergenic 35.0%
ACATAGCCACAACATTAAGA+AGG + chr3_1:19888174-19888193 None:intergenic 35.0%
! GCAGTAACATCAAGGTATTA+AGG + chr3_1:19888220-19888239 None:intergenic 35.0%
GAGTAACTCATATAAGCTCT+CGG - chr3_1:19888424-19888443 Msa0352120:intron 35.0%
CTAAACTTCATTCTTAGTGG+TGG + chr3_1:19888501-19888520 None:intergenic 35.0%
TTGTATCATGGTCATTTGCA+AGG + chr3_1:19888587-19888606 None:intergenic 35.0%
!!! GTGCTAATTTTTCAGGTAGA+AGG - chr3_1:19888672-19888691 Msa0352120:intron 35.0%
AAGGAGCTTCAGATATAGAT+GGG - chr3_1:19888691-19888710 Msa0352120:intron 35.0%
CCTCATAATACAACCCAAAT+AGG + chr3_1:19888922-19888941 None:intergenic 35.0%
!! CCTATTTGGGTTGTATTATG+AGG - chr3_1:19888919-19888938 Msa0352120:intron 35.0%
TTGGTTGAGCAGATAAGATT+TGG - chr3_1:19889047-19889066 Msa0352120:intron 35.0%
TGGTTGAGCAGATAAGATTT+GGG - chr3_1:19889048-19889067 Msa0352120:intron 35.0%
! TATTTTGTAGGAAGACCTCA+AGG - chr3_1:19889217-19889236 Msa0352120:CDS 35.0%
GAATATTCTTGACCATGAGA+TGG + chr3_1:19889279-19889298 None:intergenic 35.0%
CTTCCTTTCCCCTAAAAAAA+AGG + chr3_1:19889324-19889343 None:intergenic 35.0%
! CTGTTGTTTGAACAACCATT+TGG - chr3_1:19889547-19889566 Msa0352120:intron 35.0%
CCAATGAAAGAGAGTTACAA+AGG + chr3_1:19889976-19889995 None:intergenic 35.0%
CCTTTGTAACTCTCTTTCAT+TGG - chr3_1:19889973-19889992 Msa0352120:CDS 35.0%
ATTCATCTTCAAGAGCTTGT+GGG + chr3_1:19890004-19890023 None:intergenic 35.0%
TATTCATCTTCAAGAGCTTG+TGG + chr3_1:19890005-19890024 None:intergenic 35.0%
AAAAAGTTAGTAGGTGTTCG+AGG - chr3_1:19890119-19890138 Msa0352120:intron 35.0%
! GACTTTTGCTTCAAGACATT+TGG - chr3_1:19890268-19890287 Msa0352120:intron 35.0%
CTTCAAGACATTTGGAGATA+GGG - chr3_1:19890276-19890295 Msa0352120:intron 35.0%
!! CCATTGATGGTGTATGAATA+AGG + chr3_1:19890328-19890347 None:intergenic 35.0%
CCTTATTCATACACCATCAA+TGG - chr3_1:19890325-19890344 Msa0352120:intron 35.0%
ACCATCAATGGATATAATGG+TGG - chr3_1:19890337-19890356 Msa0352120:intron 35.0%
! ACATATTTAGAGCATCTACC+AGG + chr3_1:19890373-19890392 None:intergenic 35.0%
! GGTAGATGCTCTAAATATGT+TGG - chr3_1:19890373-19890392 Msa0352120:intron 35.0%
CAAGTTATGAGCAACAATGT+AGG + chr3_1:19890431-19890450 None:intergenic 35.0%
TTCAAAGAAGTGAGTCACTA+AGG + chr3_1:19891137-19891156 None:intergenic 35.0%
TCAGCAACACTATTGGAATA+TGG + chr3_1:19891160-19891179 None:intergenic 35.0%
!!! CACTTGACTTCTTTTTTGGA+TGG - chr3_1:19891200-19891219 Msa0352120:intron 35.0%
TTAAACGGGGTCCTTAAAAA+TGG - chr3_1:19891342-19891361 Msa0352120:CDS 35.0%
! TCCATGTGTAGTTAGTTTCA+TGG + chr3_1:19891499-19891518 None:intergenic 35.0%
TTTGCTCATCCCATTACATA+TGG - chr3_1:19891611-19891630 Msa0352120:intron 35.0%
GGATAGTGACCATATGTAAT+GGG + chr3_1:19891623-19891642 None:intergenic 35.0%
ACTGCTTTGTGCATAATATG+TGG + chr3_1:19891750-19891769 None:intergenic 35.0%
TGCACCAAAAAATGTCGAAA+TGG - chr3_1:19891769-19891788 Msa0352120:intron 35.0%
! TTGATCACAGCATTGAAGAA+TGG - chr3_1:19891917-19891936 Msa0352120:CDS 35.0%
!! TTATGCAGACTGATTTGACT+TGG - chr3_1:19892279-19892298 Msa0352120:intron 35.0%
ACAAGATCATGAATTCCCTT+TGG + chr3_1:19892317-19892336 None:intergenic 35.0%
! TTTTCAGTAATGTACACTGG+TGG + chr3_1:19892368-19892387 None:intergenic 35.0%
! CCATTTTCAGTAATGTACAC+TGG + chr3_1:19892371-19892390 None:intergenic 35.0%
CCAGTGTACATTACTGAAAA+TGG - chr3_1:19892368-19892387 Msa0352120:intron 35.0%
! TTTCAGGCATTGCTACATAT+AGG - chr3_1:19892503-19892522 Msa0352120:intron 35.0%
TAGCTCGTAAAGATGGTATT+AGG - chr3_1:19892548-19892567 Msa0352120:intron 35.0%
CATACTTTATTCCTTCAAGG+AGG + chr3_1:19892603-19892622 None:intergenic 35.0%
! ATTTTCCGACAGCTATGAAT+GGG - chr3_1:19893210-19893229 Msa0352120:intron 35.0%
!!! TTTTGAGTTTTCCCTTGAGA+AGG + chr3_1:19893333-19893352 None:intergenic 35.0%
AGGAACGCAAGTAAATACTA+AGG + chr3_1:19893414-19893433 None:intergenic 35.0%
TGATTCTCTAGCAACTTAAG+GGG - chr3_1:19893534-19893553 Msa0352120:exon 35.0%
GATATCACAATTTGCAGCCA+TGG - chr3_1:19887658-19887677 Msa0352120:three_prime_UTR 40.0%
TGGAACTGAACCACAAAAAG+TGG - chr3_1:19887742-19887761 Msa0352120:three_prime_UTR 40.0%
!!! TGACTTGGTTCCACTTTTTG+TGG + chr3_1:19887755-19887774 None:intergenic 40.0%
! AATTGGTTCTTCTGCTTACC+AGG - chr3_1:19887823-19887842 Msa0352120:CDS 40.0%
ACTATGTAGTGGTATGAACC+TGG + chr3_1:19887844-19887863 None:intergenic 40.0%
TGCTAATGCTAGCTATATGG+TGG + chr3_1:19887888-19887907 None:intergenic 40.0%
!! GATTTTGATGTCTCTACGAC+AGG + chr3_1:19888198-19888217 None:intergenic 40.0%
CAACATAGGCAGTAACATCA+AGG + chr3_1:19888228-19888247 None:intergenic 40.0%
ATAAGAACCATTCGCGCAAA+AGG - chr3_1:19888307-19888326 Msa0352120:intron 40.0%
! CGCAAAAGGTGTGTTTCAAA+TGG - chr3_1:19888321-19888340 Msa0352120:intron 40.0%
AATGACCATGATACAAGACC+TGG - chr3_1:19888591-19888610 Msa0352120:CDS 40.0%
! AACATCCAGGTCTTGTATCA+TGG + chr3_1:19888599-19888618 None:intergenic 40.0%
AGCAGGATAACATAACATCC+AGG + chr3_1:19888612-19888631 None:intergenic 40.0%
TGGATGTTATGTTATCCTGC+TGG - chr3_1:19888611-19888630 Msa0352120:CDS 40.0%
TTATGTTATCCTGCTGGAGA+AGG - chr3_1:19888617-19888636 Msa0352120:CDS 40.0%
GAAGGAGCTTCAGATATAGA+TGG - chr3_1:19888690-19888709 Msa0352120:intron 40.0%
AGCTTCAGATATAGATGGGA+GGG - chr3_1:19888695-19888714 Msa0352120:intron 40.0%
GTGAATGTGTCCCATATACT+TGG + chr3_1:19888723-19888742 None:intergenic 40.0%
TTACCGGTGAAACTCATACA+CGG - chr3_1:19888815-19888834 Msa0352120:CDS 40.0%
TTACCGTGTATGAGTTTCAC+CGG + chr3_1:19888821-19888840 None:intergenic 40.0%
CAATTTCTTTCACCACCTTG+AGG + chr3_1:19889235-19889254 None:intergenic 40.0%
CTCAAGGTGGTGAAAGAAAT+TGG - chr3_1:19889233-19889252 Msa0352120:intron 40.0%
GGTGGTGAAAGAAATTGGTT+TGG - chr3_1:19889238-19889257 Msa0352120:intron 40.0%
CATACAGATTCTCCATCTCA+TGG - chr3_1:19889264-19889283 Msa0352120:intron 40.0%
ATATCATATGCAGAGGGCAA+GGG - chr3_1:19889767-19889786 Msa0352120:intron 40.0%
!!! TTTTTTGCTTACATGGTGGC+AGG - chr3_1:19889942-19889961 Msa0352120:intron 40.0%
CTTGAAGCAAAAGTCAGCAT+AGG + chr3_1:19890263-19890282 None:intergenic 40.0%
GCTTCAAGACATTTGGAGAT+AGG - chr3_1:19890275-19890294 Msa0352120:intron 40.0%
TTGGAGATAGGGTTAAGCAT+TGG - chr3_1:19890287-19890306 Msa0352120:intron 40.0%
TGGAGATAGGGTTAAGCATT+GGG - chr3_1:19890288-19890307 Msa0352120:intron 40.0%
GCCACCATTATATCCATTGA+TGG + chr3_1:19890341-19890360 None:intergenic 40.0%
CACAACTACAAAGTGGGATT+AGG + chr3_1:19890942-19890961 None:intergenic 40.0%
GTGTCATAGGCTCATCAAAA+AGG - chr3_1:19891097-19891116 Msa0352120:intron 40.0%
!!! CGAGCACTTGACTTCTTTTT+TGG - chr3_1:19891196-19891215 Msa0352120:intron 40.0%
GCCATGAAACTAACTACACA+TGG - chr3_1:19891495-19891514 Msa0352120:intron 40.0%
GGGATAGTGACCATATGTAA+TGG + chr3_1:19891624-19891643 None:intergenic 40.0%
ACACAAACAACGAAATCACG+AGG + chr3_1:19891978-19891997 None:intergenic 40.0%
!! TTGGCTCTATGTCTATCCAA+AGG - chr3_1:19892298-19892317 Msa0352120:intron 40.0%
! TGGCTCTATGTCTATCCAAA+GGG - chr3_1:19892299-19892318 Msa0352120:intron 40.0%
TCTTTACGAGCTACATTGAC+TGG + chr3_1:19892541-19892560 None:intergenic 40.0%
GTCAATGTAGCTCGTAAAGA+TGG - chr3_1:19892541-19892560 Msa0352120:intron 40.0%
TTATTCCTTCAAGGAGGTAG+TGG + chr3_1:19892597-19892616 None:intergenic 40.0%
AGAGATGGTGCAAATGTGAA+GGG - chr3_1:19893172-19893191 Msa0352120:intron 40.0%
! CATTTTCCGACAGCTATGAA+TGG - chr3_1:19893209-19893228 Msa0352120:intron 40.0%
!! ATCCCAAGTACTCTGCTTTT+TGG - chr3_1:19893296-19893315 Msa0352120:intron 40.0%
! AGCCAAAAAGCAGAGTACTT+GGG + chr3_1:19893301-19893320 None:intergenic 40.0%
CTGCAAAAGTTCCTTCTCAA+GGG - chr3_1:19893319-19893338 Msa0352120:intron 40.0%
GATTCTCTAGCAACTTAAGG+GGG - chr3_1:19893535-19893554 Msa0352120:exon 40.0%
TCCAGTGACAACAGCCAAAA+GGG + chr3_1:19887726-19887745 None:intergenic 45.0%
TTCCAGTGACAACAGCCAAA+AGG + chr3_1:19887727-19887746 None:intergenic 45.0%
! AAACACACCTTTTGCGCGAA+TGG + chr3_1:19888317-19888336 None:intergenic 45.0%
GAGCTTCAGATATAGATGGG+AGG - chr3_1:19888694-19888713 Msa0352120:intron 45.0%
GCTTCAGATATAGATGGGAG+GGG - chr3_1:19888696-19888715 Msa0352120:intron 45.0%
! AAGATTTGGGACCATAGCAG+TGG - chr3_1:19889061-19889080 Msa0352120:intron 45.0%
! GACCATAGCAGTGGTAATGT+AGG - chr3_1:19889070-19889089 Msa0352120:intron 45.0%
CTCCTACATTACCACTGCTA+TGG + chr3_1:19889075-19889094 None:intergenic 45.0%
TTTGTAGGAAGACCTCAAGG+TGG - chr3_1:19889220-19889239 Msa0352120:CDS 45.0%
GATATCATATGCAGAGGGCA+AGG - chr3_1:19889766-19889785 Msa0352120:intron 45.0%
TATCATATGCAGAGGGCAAG+GGG - chr3_1:19889768-19889787 Msa0352120:intron 45.0%
CACAAACAAATGGGGTGCAA+TGG - chr3_1:19890541-19890560 Msa0352120:intron 45.0%
! TTATGGTTGATGTGTGCGCA+AGG - chr3_1:19890880-19890899 Msa0352120:CDS 45.0%
GTTGCTGATAAAAAGGCTGC+AGG - chr3_1:19891172-19891191 Msa0352120:CDS 45.0%
ACGGGGTCCTTAAAAATGGA+CGG - chr3_1:19891346-19891365 Msa0352120:CDS 45.0%
! TGTAATGGGATGAGCAAACC+TGG + chr3_1:19891609-19891628 None:intergenic 45.0%
TGGTGTATCTATTGGTCCCT+CGG - chr3_1:19891937-19891956 Msa0352120:intron 45.0%
GCACCATCTCTGCAAGAAAA+GGG + chr3_1:19893163-19893182 None:intergenic 45.0%
TGCACCATCTCTGCAAGAAA+AGG + chr3_1:19893164-19893183 None:intergenic 45.0%
CAGAGATGGTGCAAATGTGA+AGG - chr3_1:19893171-19893190 Msa0352120:intron 45.0%
ATGTGAAGGGCTACTATGCT+TGG - chr3_1:19893185-19893204 Msa0352120:intron 45.0%
TGCATCCCATTCATAGCTGT+CGG + chr3_1:19893218-19893237 None:intergenic 45.0%
ACAGCTATGAATGGGATGCA+GGG - chr3_1:19893218-19893237 Msa0352120:intron 45.0%
! CAGCCAAAAAGCAGAGTACT+TGG + chr3_1:19893302-19893321 None:intergenic 45.0%
GCTGCAAAAGTTCCTTCTCA+AGG - chr3_1:19893318-19893337 Msa0352120:intron 45.0%
!!! AAATTTAATTCTTTTTATTA+AGG + chr3_1:19889018-19889037 None:intergenic 5.0%
!! TAAATAATAAATATATTGAA+AGG - chr3_1:19889171-19889190 Msa0352120:intron 5.0%
!! AATAAATTAATTATTGAAAA+AGG + chr3_1:19889890-19889909 None:intergenic 5.0%
!! TAAACTTATTATTAATTTAA+TGG - chr3_1:19890214-19890233 Msa0352120:intron 5.0%
!! TATACAAAATATTATATTTA+TGG + chr3_1:19892179-19892198 None:intergenic 5.0%
TTTGCAGCCATGGGAGCTAT+AGG - chr3_1:19887668-19887687 Msa0352120:three_prime_UTR 50.0%
!! ACCCTTTTGGCTGTTGTCAC+TGG - chr3_1:19887722-19887741 Msa0352120:three_prime_UTR 50.0%
TCATGCTTACCTTCTCCAGC+AGG + chr3_1:19888629-19888648 None:intergenic 50.0%
ATGGGAGGGGACCAAGTATA+TGG - chr3_1:19888709-19888728 Msa0352120:intron 50.0%
TGGGAGGGGACCAAGTATAT+GGG - chr3_1:19888710-19888729 Msa0352120:intron 50.0%
ATCATATGCAGAGGGCAAGG+GGG - chr3_1:19889769-19889788 Msa0352120:intron 50.0%
! AATGGTGGCACTTTTGCACC+TGG - chr3_1:19890352-19890371 Msa0352120:intron 50.0%
!! CTTCAAGGAGGTAGTGGAGA+TGG + chr3_1:19892591-19892610 None:intergenic 50.0%
CATCTCCACTACCTCCTTGA+AGG - chr3_1:19892589-19892608 Msa0352120:intron 50.0%
! GGTCCCTTTTCTTGCAGAGA+TGG - chr3_1:19893157-19893176 Msa0352120:intron 50.0%
GACAGCTATGAATGGGATGC+AGG - chr3_1:19893217-19893236 Msa0352120:intron 50.0%
GCAGGGTACACAGTACGATT+TGG - chr3_1:19893235-19893254 Msa0352120:intron 50.0%
TCTAGCAACTTAAGGGGGCA+TGG - chr3_1:19893540-19893559 Msa0352120:five_prime_UTR 50.0%
GGAAGGACCTATAGCTCCCA+TGG + chr3_1:19887678-19887697 None:intergenic 55.0%
AAGGGGGCAGTCAATCCCTT+AGG - chr3_1:19889785-19889804 Msa0352120:intron 55.0%
! AGCAACTTAAGGGGGCATGG+TGG - chr3_1:19893543-19893562 Msa0352120:five_prime_UTR 55.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 19887581 19893593 19887581 ID=Msa0352120;Name=Msa0352120
chr3_1 mRNA 19887581 19893593 19887581 ID=Msa0352120-mRNA-1;Parent=Msa0352120;Name=Msa0352120-mRNA-1;_AED=0.11;_eAED=0.11;_QI=57|1|1|1|0.92|0.85|14|216|527
chr3_1 exon 19887581 19887776 19887581 ID=Msa0352120-mRNA-1:exon:4691;Parent=Msa0352120-mRNA-1
chr3_1 exon 19887797 19888000 19887797 ID=Msa0352120-mRNA-1:exon:4690;Parent=Msa0352120-mRNA-1
chr3_1 exon 19888557 19888665 19888557 ID=Msa0352120-mRNA-1:exon:4689;Parent=Msa0352120-mRNA-1
chr3_1 exon 19888785 19888887 19888785 ID=Msa0352120-mRNA-1:exon:4688;Parent=Msa0352120-mRNA-1
chr3_1 exon 19889216 19889247 19889216 ID=Msa0352120-mRNA-1:exon:4687;Parent=Msa0352120-mRNA-1
chr3_1 exon 19889350 19889564 19889350 ID=Msa0352120-mRNA-1:exon:4686;Parent=Msa0352120-mRNA-1
chr3_1 exon 19889953 19890068 19889953 ID=Msa0352120-mRNA-1:exon:4685;Parent=Msa0352120-mRNA-1
chr3_1 exon 19890676 19890928 19890676 ID=Msa0352120-mRNA-1:exon:4684;Parent=Msa0352120-mRNA-1
chr3_1 exon 19891123 19891210 19891123 ID=Msa0352120-mRNA-1:exon:4683;Parent=Msa0352120-mRNA-1
chr3_1 exon 19891323 19891394 19891323 ID=Msa0352120-mRNA-1:exon:4682;Parent=Msa0352120-mRNA-1
chr3_1 exon 19891872 19891947 19891872 ID=Msa0352120-mRNA-1:exon:4681;Parent=Msa0352120-mRNA-1
chr3_1 exon 19892057 19892115 19892057 ID=Msa0352120-mRNA-1:exon:4680;Parent=Msa0352120-mRNA-1
chr3_1 exon 19892418 19892487 19892418 ID=Msa0352120-mRNA-1:exon:4679;Parent=Msa0352120-mRNA-1
chr3_1 exon 19893330 19893593 19893330 ID=Msa0352120-mRNA-1:exon:4678;Parent=Msa0352120-mRNA-1
chr3_1 five_prime_UTR 19893537 19893593 19893537 ID=Msa0352120-mRNA-1:five_prime_utr;Parent=Msa0352120-mRNA-1
chr3_1 CDS 19893330 19893536 19893330 ID=Msa0352120-mRNA-1:cds;Parent=Msa0352120-mRNA-1
chr3_1 CDS 19892418 19892487 19892418 ID=Msa0352120-mRNA-1:cds;Parent=Msa0352120-mRNA-1
chr3_1 CDS 19892057 19892115 19892057 ID=Msa0352120-mRNA-1:cds;Parent=Msa0352120-mRNA-1
chr3_1 CDS 19891872 19891947 19891872 ID=Msa0352120-mRNA-1:cds;Parent=Msa0352120-mRNA-1
chr3_1 CDS 19891323 19891394 19891323 ID=Msa0352120-mRNA-1:cds;Parent=Msa0352120-mRNA-1
chr3_1 CDS 19891123 19891210 19891123 ID=Msa0352120-mRNA-1:cds;Parent=Msa0352120-mRNA-1
chr3_1 CDS 19890676 19890928 19890676 ID=Msa0352120-mRNA-1:cds;Parent=Msa0352120-mRNA-1
chr3_1 CDS 19889953 19890068 19889953 ID=Msa0352120-mRNA-1:cds;Parent=Msa0352120-mRNA-1
chr3_1 CDS 19889350 19889564 19889350 ID=Msa0352120-mRNA-1:cds;Parent=Msa0352120-mRNA-1
chr3_1 CDS 19889216 19889247 19889216 ID=Msa0352120-mRNA-1:cds;Parent=Msa0352120-mRNA-1
chr3_1 CDS 19888785 19888887 19888785 ID=Msa0352120-mRNA-1:cds;Parent=Msa0352120-mRNA-1
chr3_1 CDS 19888557 19888665 19888557 ID=Msa0352120-mRNA-1:cds;Parent=Msa0352120-mRNA-1
chr3_1 CDS 19887817 19888000 19887817 ID=Msa0352120-mRNA-1:cds;Parent=Msa0352120-mRNA-1
chr3_1 three_prime_UTR 19887797 19887816 19887797 ID=Msa0352120-mRNA-1:three_prime_utr;Parent=Msa0352120-mRNA-1
chr3_1 three_prime_UTR 19887581 19887776 19887581 ID=Msa0352120-mRNA-1:three_prime_utr;Parent=Msa0352120-mRNA-1
Gene Sequence

>Msa0352120

ATGTCACTACTTCATCTTTGGATATCACAATTTGCAGCCATGGGAGCTATAGGTCCTTCCCTTCTCTATCTTTTTTCTCTAGCTACCCTTTTGGCTGTTGTCACTGGAACTGAACCACAAAAAGTGGAACCAAGTCAATATGCTTCATTCAATAGGAGCCTTTTTCCTCATGATTTTCTCTTTGGAATTGGTTCTTCTGCTTACCAGGTAGAAGGAGCTTCAGATATAGATGGGAGGGGACCAAGTATATGGGACACATTCACTAAACAAAATCCAGATAAGATTTGGGACCATAGCAGTGGTAATGTAGGAGCTGATTTTTATCATCGATACAAGGAAGACCTCAAGGTGGTGAAAGAAATTGGTTTGGACTCATACAGATTCTCCATCTCATGGTCAAGAATATTCCCAAAGGGCAAGGGGGCAGTCAATCCCTTAGGAGTGAAATTCTATAACAATCTCATTAATGAGATCCTTGCAAATGGCTTAGTACCCTTTGTAACTCTCTTTCATTGGGATCTCCCACAAGCTCTTGAAGATGAATATAAGGGATTTCTAAGTAAAAATATAACGAAGGATTTTGCAGCCTATGCTGACTTTTGCTTCAAGACATTTGGAGATAGGGTTAAGCATTGGGTGACACTTAATGAACCTTATTCATACACCATCAATGGATATAATGGTGGCACTTTTGCACCTGGTAGATGCTCTAAATATGTTGGAAATTGTACTACTGGTGACTCAAGTACAGAGCCCTACATTGTTGCTCATAACTTGATACTTTCTCATGCTGCTGCAGTCAGAGTATACAAGAGAAAATATCAGGCTCATCAAAAAGGAAAAATTGGAGTGACCTTAGTGACTCACTTCTTTGAACCATATTCCAATAGTGTTGCTGATAAAAAGGCTGCAGGTCGAGCACTTGACTTCTTTTTTGGATGGTTTGCTCATCCCATTACATATGGTCACTATCCCCAAATTATGATATCTTTGTTGGGTAAAAGACTCCCCAAATTCACAAAACTAGAATCTGTAATTATCAAAGATTCCTATGATTTTCTTGGTGTGAATTATTACTCCACATATTATGCACAAAGCAGTGCACCAAAAAATGTCGAAATGGACTACTACTCTGATATGCAAGCAACTGTCTCTCCATTGAAGAATGGTGTATCTATTGGTCCCTCGACTGATTTGACTTGGCTCTATGTCTATCCAAAGGGAATTCATGATCTTGTTACACACATAAAAAATGTATACAAGAATCCACCAGTGTACATTACTGAAAATGGCATTGCTACATATAGGAATGACTCAATTCCAGTCAATGTAGCTCGTAAAGATGGTATTAGGATTAAATACCATAATGACCATCTCCACTACCTCCTTGAAGGAATAAAAGATGGTGCAAATGTGAAGGGCTACTATGCTTGGTCATTTTCCGACAGCTATGAATGGGATGCAGGGTACACAGTACGATTTGGAATAATTTATGTGGATTTCGTTAAGAATTTGAAAAGATATCCCAAGTACTCTGCTTTTTGGCTGCAAAAGTTCCTTCTCAAGGGAAAACTCAAAATTTGA

Protein sequence

>Msa0352120

MSLLHLWISQFAAMGAIGPSLLYLFSLATLLAVVTGTEPQKVEPSQYASFNRSLFPHDFLFGIGSSAYQVEGASDIDGRGPSIWDTFTKQNPDKIWDHSSGNVGADFYHRYKEDLKVVKEIGLDSYRFSISWSRIFPKGKGAVNPLGVKFYNNLINEILANGLVPFVTLFHWDLPQALEDEYKGFLSKNITKDFAAYADFCFKTFGDRVKHWVTLNEPYSYTINGYNGGTFAPGRCSKYVGNCTTGDSSTEPYIVAHNLILSHAAAVRVYKRKYQAHQKGKIGVTLVTHFFEPYSNSVADKKAAGRALDFFFGWFAHPITYGHYPQIMISLLGKRLPKFTKLESVIIKDSYDFLGVNYYSTYYAQSSAPKNVEMDYYSDMQATVSPLKNGVSIGPSTDLTWLYVYPKGIHDLVTHIKNVYKNPPVYITENGIATYRNDSIPVNVARKDGIRIKYHNDHLHYLLEGIKDGANVKGYYAWSFSDSYEWDAGYTVRFGIIYVDFVKNLKRYPKYSAFWLQKFLLKGKLKI*