Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1317480 | sp|Q9M310|FBK77_ARATH | 59.242 | 422 | 145 | 9 | 1 | 406 | 1 | 411 | 7.09e-171 | 487 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1317480 | G7ZYP7 | 93.350 | 406 | 20 | 1 | 1 | 406 | 1 | 399 | 0.0 | 781 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0063350 | Msa1317480 | 0.814149 | 1.784182e-51 | -8.615850e-47 |
| Msa0091210 | Msa1317480 | 0.819297 | 1.250661e-52 | -8.615850e-47 |
| Msa0091250 | Msa1317480 | 0.844054 | 9.585968e-59 | -8.615850e-47 |
| Msa0679290 | Msa1317480 | 0.806061 | 9.875003e-50 | -8.615850e-47 |
| Msa0183300 | Msa1317480 | 0.827737 | 1.326479e-54 | -8.615850e-47 |
| Msa1262990 | Msa1317480 | 0.808791 | 2.602991e-50 | -8.615850e-47 |
| Msa1299180 | Msa1317480 | 0.801498 | 8.751594e-49 | -8.615850e-47 |
| Msa1317480 | Msa1387590 | -0.817977 | 2.492338e-52 | -8.615850e-47 |
| Msa0999270 | Msa1317480 | 0.805120 | 1.555807e-49 | -8.615850e-47 |
| Msa1033410 | Msa1317480 | 0.814627 | 1.399310e-51 | -8.615850e-47 |
| Msa1073070 | Msa1317480 | 0.806260 | 8.966894e-50 | -8.615850e-47 |
| Msa1131670 | Msa1317480 | 0.990899 | 7.046179e-185 | -8.615850e-47 |
| Msa1208650 | Msa1317480 | 0.825175 | 5.410151e-54 | -8.615850e-47 |
| Msa0521620 | Msa1317480 | -0.808365 | 3.210435e-50 | -8.615850e-47 |
| Msa0574760 | Msa1317480 | 0.804764 | 1.846998e-49 | -8.615850e-47 |
| Msa0942550 | Msa1317480 | 0.827570 | 1.454206e-54 | -8.615850e-47 |
| Msa0942560 | Msa1317480 | 0.804629 | 1.970599e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1317480 | MtrunA17_Chr8g0347851 | 93.350 | 406 | 20 | 1 | 1 | 406 | 1 | 399 | 0.0 | 781 |
| Msa1317480 | MtrunA17_Chr8g0347881 | 75.787 | 413 | 84 | 7 | 1 | 406 | 1 | 404 | 0.0 | 636 |
| Msa1317480 | MtrunA17_Chr7g0220421 | 28.877 | 374 | 216 | 19 | 21 | 378 | 74 | 413 | 7.69e-24 | 102 |
| Msa1317480 | MtrunA17_Chr3g0122401 | 23.797 | 374 | 239 | 12 | 44 | 402 | 119 | 461 | 1.43e-17 | 84.3 |
| Msa1317480 | MtrunA17_Chr1g0150561 | 24.444 | 405 | 239 | 21 | 44 | 405 | 22 | 402 | 1.95e-13 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1317480 | AT3G61590.1 | 59.242 | 422 | 145 | 9 | 1 | 406 | 1 | 411 | 7.20e-172 | 487 |
| Msa1317480 | AT3G61590.2 | 59.242 | 422 | 145 | 9 | 1 | 406 | 9 | 419 | 1.14e-171 | 486 |
| Msa1317480 | AT3G61590.3 | 59.242 | 422 | 145 | 9 | 1 | 406 | 9 | 419 | 1.14e-171 | 486 |
| Msa1317480 | AT3G61590.4 | 59.242 | 422 | 145 | 9 | 1 | 406 | 37 | 447 | 2.08e-171 | 487 |
| Msa1317480 | AT5G15710.1 | 26.420 | 405 | 237 | 21 | 21 | 405 | 83 | 446 | 6.76e-20 | 91.7 |
| Msa1317480 | AT5G15710.2 | 26.420 | 405 | 237 | 21 | 21 | 405 | 83 | 446 | 6.76e-20 | 91.7 |
| Msa1317480 | AT1G27340.1 | 25.266 | 376 | 228 | 16 | 44 | 400 | 120 | 461 | 5.15e-19 | 89.0 |
Find 98 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAATCAAAGGAATCGGTATC+TGG | 0.262116 | 8_4:-18739916 | Msa1317480:CDS |
| GGAGACTGAGGACTTTGATT+TGG | 0.316201 | 8_4:-18740797 | Msa1317480:CDS |
| CCTTCATCGGAACTTCTAAT+TGG | 0.318885 | 8_4:-18740495 | Msa1317480:CDS |
| AACAAATACTTCCAAGGCTT+TGG | 0.322963 | 8_4:-18739851 | Msa1317480:CDS |
| TGGTTCATTTCTTCATCATA+TGG | 0.339035 | 8_4:-18740475 | Msa1317480:CDS |
| ATATGGCTTAGTTTGCTTCA+TGG | 0.341038 | 8_4:-18740458 | Msa1317480:CDS |
| TACTTTGTAGTTTACTATAC+CGG | 0.358898 | 8_4:-18740115 | Msa1317480:CDS |
| TTGATTATGCCCGGTCGATC+AGG | 0.362415 | 8_4:+18739932 | None:intergenic |
| TTAATATATATTCAAAGTTA+TGG | 0.370758 | 8_4:-18739788 | Msa1317480:CDS |
| AAGCCTTGGAAGTATTTGTT+AGG | 0.394329 | 8_4:+18739854 | None:intergenic |
| CAATACCATTTCCGAAGGTT+AGG | 0.405402 | 8_4:+18740529 | None:intergenic |
| AATGCTTACAATGGGAAGAT+AGG | 0.407712 | 8_4:+18740690 | None:intergenic |
| CTTGTAATGGTTGGAGGAAT+CGG | 0.417078 | 8_4:-18739959 | Msa1317480:CDS |
| AGAGGAAACCTCTTTGTTAC+CGG | 0.417347 | 8_4:+18739704 | None:intergenic |
| GGAAGTATTTGTTAGGCATT+CGG | 0.420912 | 8_4:+18739861 | None:intergenic |
| ACCCTATTACTAAAAGTTGC+TGG | 0.421242 | 8_4:-18740381 | Msa1317480:CDS |
| GGACAATGGCAGCAGCTTCA+TGG | 0.426643 | 8_4:-18740437 | Msa1317480:CDS |
| CCCGGGATGAATTCTGATTA+CGG | 0.437688 | 8_4:-18740343 | Msa1317480:CDS |
| GCTTCTCCTTCATATTCATT+AGG | 0.443041 | 8_4:+18739981 | None:intergenic |
| TGAACATTAAACAATGGAAA+TGG | 0.444602 | 8_4:-18739739 | Msa1317480:CDS |
| GAGGACTTTGATTTGGAACT+TGG | 0.446641 | 8_4:-18740790 | Msa1317480:CDS |
| ATGATCCTAACCTTCGGAAA+TGG | 0.454774 | 8_4:-18740534 | Msa1317480:CDS |
| TCAAGCTAGCTTGAGAAAAT+CGG | 0.464567 | 8_4:+18740041 | None:intergenic |
| AAGGAGAAGCTTGTAATGGT+TGG | 0.468022 | 8_4:-18739968 | Msa1317480:CDS |
| CTCCTTCATATTCATTAGGC+GGG | 0.474054 | 8_4:+18739985 | None:intergenic |
| TCTGGGTTCTTCATGATAAG+AGG | 0.474177 | 8_4:-18739898 | Msa1317480:CDS |
| ATGTCAAATGTGAGAAGTGC+AGG | 0.480011 | 8_4:+18739761 | None:intergenic |
| ATACGCTCCAATAAATCATC+AGG | 0.482881 | 8_4:+18740718 | None:intergenic |
| ACTTTGTAGTTTACTATACC+GGG | 0.489699 | 8_4:-18740114 | Msa1317480:CDS |
| AATCGGCAAACCTGATCGAC+CGG | 0.501161 | 8_4:-18739942 | Msa1317480:CDS |
| CATCAAACTCTCCAAAGCCT+TGG | 0.502165 | 8_4:+18739840 | None:intergenic |
| TGCATTGATCTCCCCTTCAT+CGG | 0.507773 | 8_4:-18740508 | Msa1317480:CDS |
| CCCGTCAAAACCTCGGTTAG+CGG | 0.508699 | 8_4:+18740181 | None:intergenic |
| ACTTTCGACTCTATTATGGC+TGG | 0.510570 | 8_4:-18740865 | None:intergenic |
| GCTCGGAAAATGCTTACAAT+GGG | 0.512182 | 8_4:+18740682 | None:intergenic |
| TGATGATGACGTCATGCAAA+AGG | 0.512410 | 8_4:-18740818 | Msa1317480:CDS |
| GCATGACGTCATCATCATAG+TGG | 0.512718 | 8_4:+18740824 | None:intergenic |
| GGATGCTTCAAAAGCCTCCC+GGG | 0.512854 | 8_4:-18740360 | Msa1317480:CDS |
| TGCTCGGAAAATGCTTACAA+TGG | 0.513891 | 8_4:+18740681 | None:intergenic |
| CAAGCTGCGTGTGTAAAAGA+TGG | 0.518066 | 8_4:-18740660 | Msa1317480:CDS |
| ACCAGCTCTGATGAACCATC+TGG | 0.518571 | 8_4:-18740565 | Msa1317480:CDS |
| TGGATGCTTCAAAAGCCTCC+CGG | 0.520079 | 8_4:-18740361 | Msa1317480:CDS |
| CTTTGATTTGGAACTTGGTG+AGG | 0.521579 | 8_4:-18740785 | Msa1317480:CDS |
| GAAATGGTCACATAAATGTC+CGG | 0.524074 | 8_4:-18739723 | Msa1317480:CDS |
| ACCAGATGGTTCATCAGAGC+TGG | 0.524405 | 8_4:+18740564 | None:intergenic |
| ATGCTTATGATCCTAACCTT+CGG | 0.527055 | 8_4:-18740540 | Msa1317480:CDS |
| AATCAAAGGAATCGGTATCT+GGG | 0.529604 | 8_4:-18739915 | Msa1317480:CDS |
| CAATTCGAAGGAGGAGGCAT+GGG | 0.529743 | 8_4:-18740209 | Msa1317480:CDS |
| CCAATTAGAAGTTCCGATGA+AGG | 0.532890 | 8_4:+18740495 | None:intergenic |
| CGCCCGCCTAATGAATATGA+AGG | 0.533578 | 8_4:-18739987 | Msa1317480:CDS |
| CCGATTCCTTTGATTATGCC+CGG | 0.535424 | 8_4:+18739923 | None:intergenic |
| TATGGAGCAATTTCAAGTCT+CGG | 0.538101 | 8_4:+18739653 | None:intergenic |
| CGGGCGCATGTCAGAGAACA+TGG | 0.542463 | 8_4:+18740004 | None:intergenic |
| GAGAAGCTTGTAATGGTTGG+AGG | 0.543004 | 8_4:-18739965 | Msa1317480:CDS |
| TCTCCTTCATATTCATTAGG+CGG | 0.544723 | 8_4:+18739984 | None:intergenic |
| CCGGGCATAATCAAAGGAAT+CGG | 0.544910 | 8_4:-18739923 | Msa1317480:CDS |
| GTGAAATCAAAGCAAGTCCC+TGG | 0.546583 | 8_4:-18740268 | Msa1317480:CDS |
| ATTTGCTACCTCAGAAACCT+TGG | 0.551644 | 8_4:-18740600 | Msa1317480:CDS |
| ATAAAATACCAAGGTTTCTG+AGG | 0.554768 | 8_4:+18740592 | None:intergenic |
| CAATTAGAAGTTCCGATGAA+GGG | 0.559961 | 8_4:+18740496 | None:intergenic |
| GGATCATAAGCATGACCAGA+TGG | 0.560016 | 8_4:+18740550 | None:intergenic |
| TTCTGAGGTAGCAAATGTGA+AGG | 0.561368 | 8_4:+18740607 | None:intergenic |
| CCGTAATCAGAATTCATCCC+GGG | 0.563480 | 8_4:+18740343 | None:intergenic |
| GATCGACCGGGCATAATCAA+AGG | 0.567118 | 8_4:-18739929 | Msa1317480:CDS |
| TGTATACAATTCGAAGGAGG+AGG | 0.575653 | 8_4:-18740215 | Msa1317480:CDS |
| ACAATTCGAAGGAGGAGGCA+TGG | 0.576395 | 8_4:-18740210 | Msa1317480:CDS |
| TTGACATGAACATTAAACAA+TGG | 0.581252 | 8_4:-18739745 | Msa1317480:CDS |
| GGGTTCTTCATGATAAGAGG+TGG | 0.587087 | 8_4:-18739895 | Msa1317480:CDS |
| TTAGTTTGCTTCATGGACAA+TGG | 0.592770 | 8_4:-18740451 | Msa1317480:CDS |
| ATGCCTAACAAATACTTCCA+AGG | 0.595230 | 8_4:-18739857 | Msa1317480:CDS |
| CAATGCAATACCATTTCCGA+AGG | 0.595952 | 8_4:+18740524 | None:intergenic |
| TTATGGCTGGAGAAATAGCA+TGG | 0.599227 | 8_4:-18740852 | Msa1317480:CDS |
| ACCGTAATCAGAATTCATCC+CGG | 0.601491 | 8_4:+18740342 | None:intergenic |
| CTTTGATTTCACAATTGCCA+CGG | 0.603398 | 8_4:+18740279 | None:intergenic |
| ATTAGCAATTTCAGTTGACA+AGG | 0.607177 | 8_4:-18740317 | Msa1317480:CDS |
| AAACCAGTGAAAAGCTGTAG+AGG | 0.608044 | 8_4:+18739686 | None:intergenic |
| AATTCATGTATACAATTCGA+AGG | 0.612431 | 8_4:-18740221 | Msa1317480:CDS |
| TTACAATGGGAAGATAGGAC+AGG | 0.618033 | 8_4:+18740695 | None:intergenic |
| ATGGGTGACGCCGCTAACCG+AGG | 0.618591 | 8_4:-18740191 | Msa1317480:CDS |
| AATTAGAAGTTCCGATGAAG+GGG | 0.619209 | 8_4:+18740497 | None:intergenic |
| TATGAAGGAGAAGCTTGTAA+TGG | 0.619491 | 8_4:-18739972 | Msa1317480:CDS |
| GCTAGCTTGAGAAAATCGGT+TGG | 0.622899 | 8_4:+18740045 | None:intergenic |
| CTTTGTAGTTTACTATACCG+GGG | 0.627446 | 8_4:-18740113 | Msa1317480:CDS |
| ATCGGCAAACCTGATCGACC+GGG | 0.628435 | 8_4:-18739941 | Msa1317480:CDS |
| TATATGCGATTAACGCGTGA+CGG | 0.629229 | 8_4:+18740074 | None:intergenic |
| AGATGTGAGTGCTGTTTCTG+TGG | 0.630387 | 8_4:-18740752 | Msa1317480:CDS |
| GGTTCTTCATGATAAGAGGT+GGG | 0.637527 | 8_4:-18739894 | Msa1317480:CDS |
| TCTCCACCCCGTCAAAACCT+CGG | 0.639771 | 8_4:+18740174 | None:intergenic |
| TCTGAGGTAGCAAATGTGAA+GGG | 0.643976 | 8_4:+18740608 | None:intergenic |
| TCAGTTGACAAGGAATCACA+TGG | 0.646810 | 8_4:-18740307 | Msa1317480:CDS |
| TTTGTAGTTTACTATACCGG+GGG | 0.658197 | 8_4:-18740112 | Msa1317480:CDS |
| ATAAATGTCCGGTAACAAAG+AGG | 0.659921 | 8_4:-18739712 | Msa1317480:CDS |
| CTGGTGAACATAAAATACCA+AGG | 0.674014 | 8_4:+18740583 | None:intergenic |
| CGTCATGCAAAAGGAGACTG+AGG | 0.685618 | 8_4:-18740809 | Msa1317480:CDS |
| TCATGTATACAATTCGAAGG+AGG | 0.685980 | 8_4:-18740218 | Msa1317480:CDS |
| GATGAGAGTGTGATATGCAA+TGG | 0.696052 | 8_4:-18740145 | Msa1317480:CDS |
| TAATCAGAATTCATCCCGGG+AGG | 0.709796 | 8_4:+18740346 | None:intergenic |
| GGAATCACATGGTTATACCG+TGG | 0.720898 | 8_4:-18740296 | Msa1317480:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATATATATTCAAAGTTA+TGG | - | chr8_4:18740714-18740733 | Msa1317480:CDS | 10.0% |
| !! | TTAATATATATTCAAAGTTA+TGG | - | chr8_4:18740714-18740733 | Msa1317480:CDS | 10.0% |
| !! | AATTTTGCCTGATGATTTAT+TGG | - | chr8_4:18739777-18739796 | Msa1317480:CDS | 25.0% |
| ! | AATTCATGTATACAATTCGA+AGG | - | chr8_4:18740281-18740300 | Msa1317480:CDS | 25.0% |
| ! | TACTTTGTAGTTTACTATAC+CGG | - | chr8_4:18740387-18740406 | Msa1317480:CDS | 25.0% |
| ! | TTGACATGAACATTAAACAA+TGG | - | chr8_4:18740757-18740776 | Msa1317480:CDS | 25.0% |
| ! | TGAACATTAAACAATGGAAA+TGG | - | chr8_4:18740763-18740782 | Msa1317480:CDS | 25.0% |
| !! | AATTTTGCCTGATGATTTAT+TGG | - | chr8_4:18739777-18739796 | Msa1317480:CDS | 25.0% |
| ! | AATTCATGTATACAATTCGA+AGG | - | chr8_4:18740281-18740300 | Msa1317480:CDS | 25.0% |
| ! | TACTTTGTAGTTTACTATAC+CGG | - | chr8_4:18740387-18740406 | Msa1317480:CDS | 25.0% |
| ! | TTGACATGAACATTAAACAA+TGG | - | chr8_4:18740757-18740776 | Msa1317480:CDS | 25.0% |
| ! | TGAACATTAAACAATGGAAA+TGG | - | chr8_4:18740763-18740782 | Msa1317480:CDS | 25.0% |
| ATAAAATACCAAGGTTTCTG+AGG | + | chr8_4:18739913-18739932 | None:intergenic | 30.0% | |
| TGGTTCATTTCTTCATCATA+TGG | - | chr8_4:18740027-18740046 | Msa1317480:CDS | 30.0% | |
| ! | TCCAGCAACTTTTAGTAATA+GGG | + | chr8_4:18740125-18740144 | None:intergenic | 30.0% |
| ! | ATCCAGCAACTTTTAGTAAT+AGG | + | chr8_4:18740126-18740145 | None:intergenic | 30.0% |
| ATTAGCAATTTCAGTTGACA+AGG | - | chr8_4:18740185-18740204 | Msa1317480:CDS | 30.0% | |
| ACTTTGTAGTTTACTATACC+GGG | - | chr8_4:18740388-18740407 | Msa1317480:CDS | 30.0% | |
| ATAAAATACCAAGGTTTCTG+AGG | + | chr8_4:18739913-18739932 | None:intergenic | 30.0% | |
| TGGTTCATTTCTTCATCATA+TGG | - | chr8_4:18740027-18740046 | Msa1317480:CDS | 30.0% | |
| ! | TCCAGCAACTTTTAGTAATA+GGG | + | chr8_4:18740125-18740144 | None:intergenic | 30.0% |
| ! | ATCCAGCAACTTTTAGTAAT+AGG | + | chr8_4:18740126-18740145 | None:intergenic | 30.0% |
| ATTAGCAATTTCAGTTGACA+AGG | - | chr8_4:18740185-18740204 | Msa1317480:CDS | 30.0% | |
| ACTTTGTAGTTTACTATACC+GGG | - | chr8_4:18740388-18740407 | Msa1317480:CDS | 30.0% | |
| ATACGCTCCAATAAATCATC+AGG | + | chr8_4:18739787-18739806 | None:intergenic | 35.0% | |
| AATGCTTACAATGGGAAGAT+AGG | + | chr8_4:18739815-18739834 | None:intergenic | 35.0% | |
| CTGGTGAACATAAAATACCA+AGG | + | chr8_4:18739922-18739941 | None:intergenic | 35.0% | |
| ATGCTTATGATCCTAACCTT+CGG | - | chr8_4:18739962-18739981 | Msa1317480:CDS | 35.0% | |
| AATTAGAAGTTCCGATGAAG+GGG | + | chr8_4:18740008-18740027 | None:intergenic | 35.0% | |
| CAATTAGAAGTTCCGATGAA+GGG | + | chr8_4:18740009-18740028 | None:intergenic | 35.0% | |
| !! | ATATGGCTTAGTTTGCTTCA+TGG | - | chr8_4:18740044-18740063 | Msa1317480:CDS | 35.0% |
| !! | TTAGTTTGCTTCATGGACAA+TGG | - | chr8_4:18740051-18740070 | Msa1317480:CDS | 35.0% |
| ACCCTATTACTAAAAGTTGC+TGG | - | chr8_4:18740121-18740140 | Msa1317480:CDS | 35.0% | |
| ! | CTTTGATTTCACAATTGCCA+CGG | + | chr8_4:18740226-18740245 | None:intergenic | 35.0% |
| TCATGTATACAATTCGAAGG+AGG | - | chr8_4:18740284-18740303 | Msa1317480:CDS | 35.0% | |
| CTTTGTAGTTTACTATACCG+GGG | - | chr8_4:18740389-18740408 | Msa1317480:CDS | 35.0% | |
| TTTGTAGTTTACTATACCGG+GGG | - | chr8_4:18740390-18740409 | Msa1317480:CDS | 35.0% | |
| ! | TCAAGCTAGCTTGAGAAAAT+CGG | + | chr8_4:18740464-18740483 | None:intergenic | 35.0% |
| TCTCCTTCATATTCATTAGG+CGG | + | chr8_4:18740521-18740540 | None:intergenic | 35.0% | |
| GCTTCTCCTTCATATTCATT+AGG | + | chr8_4:18740524-18740543 | None:intergenic | 35.0% | |
| TATGAAGGAGAAGCTTGTAA+TGG | - | chr8_4:18740530-18740549 | Msa1317480:CDS | 35.0% | |
| TAATCAAAGGAATCGGTATC+TGG | - | chr8_4:18740586-18740605 | Msa1317480:CDS | 35.0% | |
| AATCAAAGGAATCGGTATCT+GGG | - | chr8_4:18740587-18740606 | Msa1317480:CDS | 35.0% | |
| !! | GGAAGTATTTGTTAGGCATT+CGG | + | chr8_4:18740644-18740663 | None:intergenic | 35.0% |
| ATGCCTAACAAATACTTCCA+AGG | - | chr8_4:18740645-18740664 | Msa1317480:CDS | 35.0% | |
| !! | AAGCCTTGGAAGTATTTGTT+AGG | + | chr8_4:18740651-18740670 | None:intergenic | 35.0% |
| AACAAATACTTCCAAGGCTT+TGG | - | chr8_4:18740651-18740670 | Msa1317480:CDS | 35.0% | |
| GAAATGGTCACATAAATGTC+CGG | - | chr8_4:18740779-18740798 | Msa1317480:CDS | 35.0% | |
| ATAAATGTCCGGTAACAAAG+AGG | - | chr8_4:18740790-18740809 | Msa1317480:CDS | 35.0% | |
| ! | TATGGAGCAATTTCAAGTCT+CGG | + | chr8_4:18740852-18740871 | None:intergenic | 35.0% |
| ATACGCTCCAATAAATCATC+AGG | + | chr8_4:18739787-18739806 | None:intergenic | 35.0% | |
| AATGCTTACAATGGGAAGAT+AGG | + | chr8_4:18739815-18739834 | None:intergenic | 35.0% | |
| CTGGTGAACATAAAATACCA+AGG | + | chr8_4:18739922-18739941 | None:intergenic | 35.0% | |
| ATGCTTATGATCCTAACCTT+CGG | - | chr8_4:18739962-18739981 | Msa1317480:CDS | 35.0% | |
| AATTAGAAGTTCCGATGAAG+GGG | + | chr8_4:18740008-18740027 | None:intergenic | 35.0% | |
| CAATTAGAAGTTCCGATGAA+GGG | + | chr8_4:18740009-18740028 | None:intergenic | 35.0% | |
| !! | ATATGGCTTAGTTTGCTTCA+TGG | - | chr8_4:18740044-18740063 | Msa1317480:CDS | 35.0% |
| !! | TTAGTTTGCTTCATGGACAA+TGG | - | chr8_4:18740051-18740070 | Msa1317480:CDS | 35.0% |
| ACCCTATTACTAAAAGTTGC+TGG | - | chr8_4:18740121-18740140 | Msa1317480:CDS | 35.0% | |
| ! | CTTTGATTTCACAATTGCCA+CGG | + | chr8_4:18740226-18740245 | None:intergenic | 35.0% |
| TCATGTATACAATTCGAAGG+AGG | - | chr8_4:18740284-18740303 | Msa1317480:CDS | 35.0% | |
| CTTTGTAGTTTACTATACCG+GGG | - | chr8_4:18740389-18740408 | Msa1317480:CDS | 35.0% | |
| TTTGTAGTTTACTATACCGG+GGG | - | chr8_4:18740390-18740409 | Msa1317480:CDS | 35.0% | |
| ! | TCAAGCTAGCTTGAGAAAAT+CGG | + | chr8_4:18740464-18740483 | None:intergenic | 35.0% |
| TCTCCTTCATATTCATTAGG+CGG | + | chr8_4:18740521-18740540 | None:intergenic | 35.0% | |
| GCTTCTCCTTCATATTCATT+AGG | + | chr8_4:18740524-18740543 | None:intergenic | 35.0% | |
| TATGAAGGAGAAGCTTGTAA+TGG | - | chr8_4:18740530-18740549 | Msa1317480:CDS | 35.0% | |
| TAATCAAAGGAATCGGTATC+TGG | - | chr8_4:18740586-18740605 | Msa1317480:CDS | 35.0% | |
| AATCAAAGGAATCGGTATCT+GGG | - | chr8_4:18740587-18740606 | Msa1317480:CDS | 35.0% | |
| !! | GGAAGTATTTGTTAGGCATT+CGG | + | chr8_4:18740644-18740663 | None:intergenic | 35.0% |
| ATGCCTAACAAATACTTCCA+AGG | - | chr8_4:18740645-18740664 | Msa1317480:CDS | 35.0% | |
| !! | AAGCCTTGGAAGTATTTGTT+AGG | + | chr8_4:18740651-18740670 | None:intergenic | 35.0% |
| AACAAATACTTCCAAGGCTT+TGG | - | chr8_4:18740651-18740670 | Msa1317480:CDS | 35.0% | |
| GAAATGGTCACATAAATGTC+CGG | - | chr8_4:18740779-18740798 | Msa1317480:CDS | 35.0% | |
| ATAAATGTCCGGTAACAAAG+AGG | - | chr8_4:18740790-18740809 | Msa1317480:CDS | 35.0% | |
| ! | TATGGAGCAATTTCAAGTCT+CGG | + | chr8_4:18740852-18740871 | None:intergenic | 35.0% |
| ! | TGATGATGACGTCATGCAAA+AGG | - | chr8_4:18739684-18739703 | Msa1317480:CDS | 40.0% |
| !! | GAGGACTTTGATTTGGAACT+TGG | - | chr8_4:18739712-18739731 | Msa1317480:CDS | 40.0% |
| !! | CTTTGATTTGGAACTTGGTG+AGG | - | chr8_4:18739717-18739736 | Msa1317480:CDS | 40.0% |
| TTACAATGGGAAGATAGGAC+AGG | + | chr8_4:18739810-18739829 | None:intergenic | 40.0% | |
| GCTCGGAAAATGCTTACAAT+GGG | + | chr8_4:18739823-18739842 | None:intergenic | 40.0% | |
| TGCTCGGAAAATGCTTACAA+TGG | + | chr8_4:18739824-18739843 | None:intergenic | 40.0% | |
| ! | GATGGCACACGATTTTTGAA+AGG | - | chr8_4:18739860-18739879 | Msa1317480:CDS | 40.0% |
| ! | TCTGAGGTAGCAAATGTGAA+GGG | + | chr8_4:18739897-18739916 | None:intergenic | 40.0% |
| !! | TTCTGAGGTAGCAAATGTGA+AGG | + | chr8_4:18739898-18739917 | None:intergenic | 40.0% |
| ! | ATTTGCTACCTCAGAAACCT+TGG | - | chr8_4:18739902-18739921 | Msa1317480:CDS | 40.0% |
| ATGATCCTAACCTTCGGAAA+TGG | - | chr8_4:18739968-18739987 | Msa1317480:CDS | 40.0% | |
| CAATACCATTTCCGAAGGTT+AGG | + | chr8_4:18739976-18739995 | None:intergenic | 40.0% | |
| CAATGCAATACCATTTCCGA+AGG | + | chr8_4:18739981-18740000 | None:intergenic | 40.0% | |
| CCAATTAGAAGTTCCGATGA+AGG | + | chr8_4:18740010-18740029 | None:intergenic | 40.0% | |
| CCTTCATCGGAACTTCTAAT+TGG | - | chr8_4:18740007-18740026 | Msa1317480:CDS | 40.0% | |
| ACCGTAATCAGAATTCATCC+CGG | + | chr8_4:18740163-18740182 | None:intergenic | 40.0% | |
| TCAGTTGACAAGGAATCACA+TGG | - | chr8_4:18740195-18740214 | Msa1317480:CDS | 40.0% | |
| !!! | TCCCTGGAAACTTTTTTCAG+TGG | - | chr8_4:18740250-18740269 | Msa1317480:CDS | 40.0% |
| CCCACTGAAAAAAGTTTCCA+GGG | + | chr8_4:18740254-18740273 | None:intergenic | 40.0% | |
| !!! | CCCTGGAAACTTTTTTCAGT+GGG | - | chr8_4:18740251-18740270 | Msa1317480:CDS | 40.0% |
| TCCCACTGAAAAAAGTTTCC+AGG | + | chr8_4:18740255-18740274 | None:intergenic | 40.0% | |
| TGTATACAATTCGAAGGAGG+AGG | - | chr8_4:18740287-18740306 | Msa1317480:CDS | 40.0% | |
| ! | GATGAGAGTGTGATATGCAA+TGG | - | chr8_4:18740357-18740376 | Msa1317480:CDS | 40.0% |
| TATATGCGATTAACGCGTGA+CGG | + | chr8_4:18740431-18740450 | None:intergenic | 40.0% | |
| CTCCTTCATATTCATTAGGC+GGG | + | chr8_4:18740520-18740539 | None:intergenic | 40.0% | |
| AAGGAGAAGCTTGTAATGGT+TGG | - | chr8_4:18740534-18740553 | Msa1317480:CDS | 40.0% | |
| CTTGTAATGGTTGGAGGAAT+CGG | - | chr8_4:18740543-18740562 | Msa1317480:CDS | 40.0% | |
| TCTGGGTTCTTCATGATAAG+AGG | - | chr8_4:18740604-18740623 | Msa1317480:CDS | 40.0% | |
| GGTTCTTCATGATAAGAGGT+GGG | - | chr8_4:18740608-18740627 | Msa1317480:CDS | 40.0% | |
| !! | GATGATGTTTTTGCTAGCAG+TGG | - | chr8_4:18740681-18740700 | Msa1317480:CDS | 40.0% |
| ! | ATGTCAAATGTGAGAAGTGC+AGG | + | chr8_4:18740744-18740763 | None:intergenic | 40.0% |
| AGAGGAAACCTCTTTGTTAC+CGG | + | chr8_4:18740801-18740820 | None:intergenic | 40.0% | |
| ! | TTTCCTCTACAGCTTTTCAC+TGG | - | chr8_4:18740813-18740832 | Msa1317480:CDS | 40.0% |
| AAACCAGTGAAAAGCTGTAG+AGG | + | chr8_4:18740819-18740838 | None:intergenic | 40.0% | |
| ! | TGATGATGACGTCATGCAAA+AGG | - | chr8_4:18739684-18739703 | Msa1317480:CDS | 40.0% |
| !! | GAGGACTTTGATTTGGAACT+TGG | - | chr8_4:18739712-18739731 | Msa1317480:CDS | 40.0% |
| !! | CTTTGATTTGGAACTTGGTG+AGG | - | chr8_4:18739717-18739736 | Msa1317480:CDS | 40.0% |
| TTACAATGGGAAGATAGGAC+AGG | + | chr8_4:18739810-18739829 | None:intergenic | 40.0% | |
| GCTCGGAAAATGCTTACAAT+GGG | + | chr8_4:18739823-18739842 | None:intergenic | 40.0% | |
| TGCTCGGAAAATGCTTACAA+TGG | + | chr8_4:18739824-18739843 | None:intergenic | 40.0% | |
| ! | GATGGCACACGATTTTTGAA+AGG | - | chr8_4:18739860-18739879 | Msa1317480:CDS | 40.0% |
| ! | TCTGAGGTAGCAAATGTGAA+GGG | + | chr8_4:18739897-18739916 | None:intergenic | 40.0% |
| !! | TTCTGAGGTAGCAAATGTGA+AGG | + | chr8_4:18739898-18739917 | None:intergenic | 40.0% |
| ! | ATTTGCTACCTCAGAAACCT+TGG | - | chr8_4:18739902-18739921 | Msa1317480:CDS | 40.0% |
| ATGATCCTAACCTTCGGAAA+TGG | - | chr8_4:18739968-18739987 | Msa1317480:CDS | 40.0% | |
| CAATACCATTTCCGAAGGTT+AGG | + | chr8_4:18739976-18739995 | None:intergenic | 40.0% | |
| CAATGCAATACCATTTCCGA+AGG | + | chr8_4:18739981-18740000 | None:intergenic | 40.0% | |
| CCAATTAGAAGTTCCGATGA+AGG | + | chr8_4:18740010-18740029 | None:intergenic | 40.0% | |
| CCTTCATCGGAACTTCTAAT+TGG | - | chr8_4:18740007-18740026 | Msa1317480:CDS | 40.0% | |
| ACCGTAATCAGAATTCATCC+CGG | + | chr8_4:18740163-18740182 | None:intergenic | 40.0% | |
| TCAGTTGACAAGGAATCACA+TGG | - | chr8_4:18740195-18740214 | Msa1317480:CDS | 40.0% | |
| !!! | TCCCTGGAAACTTTTTTCAG+TGG | - | chr8_4:18740250-18740269 | Msa1317480:CDS | 40.0% |
| CCCACTGAAAAAAGTTTCCA+GGG | + | chr8_4:18740254-18740273 | None:intergenic | 40.0% | |
| !!! | CCCTGGAAACTTTTTTCAGT+GGG | - | chr8_4:18740251-18740270 | Msa1317480:CDS | 40.0% |
| TCCCACTGAAAAAAGTTTCC+AGG | + | chr8_4:18740255-18740274 | None:intergenic | 40.0% | |
| TGTATACAATTCGAAGGAGG+AGG | - | chr8_4:18740287-18740306 | Msa1317480:CDS | 40.0% | |
| ! | GATGAGAGTGTGATATGCAA+TGG | - | chr8_4:18740357-18740376 | Msa1317480:CDS | 40.0% |
| TATATGCGATTAACGCGTGA+CGG | + | chr8_4:18740431-18740450 | None:intergenic | 40.0% | |
| CTCCTTCATATTCATTAGGC+GGG | + | chr8_4:18740520-18740539 | None:intergenic | 40.0% | |
| AAGGAGAAGCTTGTAATGGT+TGG | - | chr8_4:18740534-18740553 | Msa1317480:CDS | 40.0% | |
| CTTGTAATGGTTGGAGGAAT+CGG | - | chr8_4:18740543-18740562 | Msa1317480:CDS | 40.0% | |
| TCTGGGTTCTTCATGATAAG+AGG | - | chr8_4:18740604-18740623 | Msa1317480:CDS | 40.0% | |
| GGTTCTTCATGATAAGAGGT+GGG | - | chr8_4:18740608-18740627 | Msa1317480:CDS | 40.0% | |
| !! | GATGATGTTTTTGCTAGCAG+TGG | - | chr8_4:18740681-18740700 | Msa1317480:CDS | 40.0% |
| ! | ATGTCAAATGTGAGAAGTGC+AGG | + | chr8_4:18740744-18740763 | None:intergenic | 40.0% |
| AGAGGAAACCTCTTTGTTAC+CGG | + | chr8_4:18740801-18740820 | None:intergenic | 40.0% | |
| ! | TTTCCTCTACAGCTTTTCAC+TGG | - | chr8_4:18740813-18740832 | Msa1317480:CDS | 40.0% |
| AAACCAGTGAAAAGCTGTAG+AGG | + | chr8_4:18740819-18740838 | None:intergenic | 40.0% | |
| GCATGACGTCATCATCATAG+TGG | + | chr8_4:18739681-18739700 | None:intergenic | 45.0% | |
| GGAGACTGAGGACTTTGATT+TGG | - | chr8_4:18739705-18739724 | Msa1317480:CDS | 45.0% | |
| !! | AGATGTGAGTGCTGTTTCTG+TGG | - | chr8_4:18739750-18739769 | Msa1317480:CDS | 45.0% |
| !! | TTTTACACACGCAGCTTGCT+CGG | + | chr8_4:18739840-18739859 | None:intergenic | 45.0% |
| CAAGCTGCGTGTGTAAAAGA+TGG | - | chr8_4:18739842-18739861 | Msa1317480:CDS | 45.0% | |
| GGATCATAAGCATGACCAGA+TGG | + | chr8_4:18739955-18739974 | None:intergenic | 45.0% | |
| ! | TGCATTGATCTCCCCTTCAT+CGG | - | chr8_4:18739994-18740013 | Msa1317480:CDS | 45.0% |
| TAATCAGAATTCATCCCGGG+AGG | + | chr8_4:18740159-18740178 | None:intergenic | 45.0% | |
| CCGTAATCAGAATTCATCCC+GGG | + | chr8_4:18740162-18740181 | None:intergenic | 45.0% | |
| CCCGGGATGAATTCTGATTA+CGG | - | chr8_4:18740159-18740178 | Msa1317480:CDS | 45.0% | |
| GGAATCACATGGTTATACCG+TGG | - | chr8_4:18740206-18740225 | Msa1317480:CDS | 45.0% | |
| GTGAAATCAAAGCAAGTCCC+TGG | - | chr8_4:18740234-18740253 | Msa1317480:CDS | 45.0% | |
| ! | ATTAACGCGTGACGGTTTTC+TGG | + | chr8_4:18740423-18740442 | None:intergenic | 45.0% |
| ! | GCTAGCTTGAGAAAATCGGT+TGG | + | chr8_4:18740460-18740479 | None:intergenic | 45.0% |
| GAGAAGCTTGTAATGGTTGG+AGG | - | chr8_4:18740537-18740556 | Msa1317480:CDS | 45.0% | |
| CCGATTCCTTTGATTATGCC+CGG | + | chr8_4:18740582-18740601 | None:intergenic | 45.0% | |
| CCGGGCATAATCAAAGGAAT+CGG | - | chr8_4:18740579-18740598 | Msa1317480:CDS | 45.0% | |
| GGGTTCTTCATGATAAGAGG+TGG | - | chr8_4:18740607-18740626 | Msa1317480:CDS | 45.0% | |
| CATCAAACTCTCCAAAGCCT+TGG | + | chr8_4:18740665-18740684 | None:intergenic | 45.0% | |
| GCATGACGTCATCATCATAG+TGG | + | chr8_4:18739681-18739700 | None:intergenic | 45.0% | |
| GGAGACTGAGGACTTTGATT+TGG | - | chr8_4:18739705-18739724 | Msa1317480:CDS | 45.0% | |
| !! | AGATGTGAGTGCTGTTTCTG+TGG | - | chr8_4:18739750-18739769 | Msa1317480:CDS | 45.0% |
| !! | TTTTACACACGCAGCTTGCT+CGG | + | chr8_4:18739840-18739859 | None:intergenic | 45.0% |
| CAAGCTGCGTGTGTAAAAGA+TGG | - | chr8_4:18739842-18739861 | Msa1317480:CDS | 45.0% | |
| GGATCATAAGCATGACCAGA+TGG | + | chr8_4:18739955-18739974 | None:intergenic | 45.0% | |
| ! | TGCATTGATCTCCCCTTCAT+CGG | - | chr8_4:18739994-18740013 | Msa1317480:CDS | 45.0% |
| TAATCAGAATTCATCCCGGG+AGG | + | chr8_4:18740159-18740178 | None:intergenic | 45.0% | |
| CCGTAATCAGAATTCATCCC+GGG | + | chr8_4:18740162-18740181 | None:intergenic | 45.0% | |
| CCCGGGATGAATTCTGATTA+CGG | - | chr8_4:18740159-18740178 | Msa1317480:CDS | 45.0% | |
| GGAATCACATGGTTATACCG+TGG | - | chr8_4:18740206-18740225 | Msa1317480:CDS | 45.0% | |
| GTGAAATCAAAGCAAGTCCC+TGG | - | chr8_4:18740234-18740253 | Msa1317480:CDS | 45.0% | |
| ! | ATTAACGCGTGACGGTTTTC+TGG | + | chr8_4:18740423-18740442 | None:intergenic | 45.0% |
| ! | GCTAGCTTGAGAAAATCGGT+TGG | + | chr8_4:18740460-18740479 | None:intergenic | 45.0% |
| GAGAAGCTTGTAATGGTTGG+AGG | - | chr8_4:18740537-18740556 | Msa1317480:CDS | 45.0% | |
| CCGATTCCTTTGATTATGCC+CGG | + | chr8_4:18740582-18740601 | None:intergenic | 45.0% | |
| CCGGGCATAATCAAAGGAAT+CGG | - | chr8_4:18740579-18740598 | Msa1317480:CDS | 45.0% | |
| GGGTTCTTCATGATAAGAGG+TGG | - | chr8_4:18740607-18740626 | Msa1317480:CDS | 45.0% | |
| CATCAAACTCTCCAAAGCCT+TGG | + | chr8_4:18740665-18740684 | None:intergenic | 45.0% | |
| CGTCATGCAAAAGGAGACTG+AGG | - | chr8_4:18739693-18739712 | Msa1317480:CDS | 50.0% | |
| ! | ACCAGCTCTGATGAACCATC+TGG | - | chr8_4:18739937-18739956 | Msa1317480:CDS | 50.0% |
| ACCAGATGGTTCATCAGAGC+TGG | + | chr8_4:18739941-18739960 | None:intergenic | 50.0% | |
| TGGATGCTTCAAAAGCCTCC+CGG | - | chr8_4:18740141-18740160 | Msa1317480:CDS | 50.0% | |
| ACAATTCGAAGGAGGAGGCA+TGG | - | chr8_4:18740292-18740311 | Msa1317480:CDS | 50.0% | |
| ! | CAATTCGAAGGAGGAGGCAT+GGG | - | chr8_4:18740293-18740312 | Msa1317480:CDS | 50.0% |
| CGCCCGCCTAATGAATATGA+AGG | - | chr8_4:18740515-18740534 | Msa1317480:CDS | 50.0% | |
| AATCGGCAAACCTGATCGAC+CGG | - | chr8_4:18740560-18740579 | Msa1317480:CDS | 50.0% | |
| TTGATTATGCCCGGTCGATC+AGG | + | chr8_4:18740573-18740592 | None:intergenic | 50.0% | |
| GATCGACCGGGCATAATCAA+AGG | - | chr8_4:18740573-18740592 | Msa1317480:CDS | 50.0% | |
| CGTCATGCAAAAGGAGACTG+AGG | - | chr8_4:18739693-18739712 | Msa1317480:CDS | 50.0% | |
| ! | ACCAGCTCTGATGAACCATC+TGG | - | chr8_4:18739937-18739956 | Msa1317480:CDS | 50.0% |
| ACCAGATGGTTCATCAGAGC+TGG | + | chr8_4:18739941-18739960 | None:intergenic | 50.0% | |
| TGGATGCTTCAAAAGCCTCC+CGG | - | chr8_4:18740141-18740160 | Msa1317480:CDS | 50.0% | |
| ACAATTCGAAGGAGGAGGCA+TGG | - | chr8_4:18740292-18740311 | Msa1317480:CDS | 50.0% | |
| ! | CAATTCGAAGGAGGAGGCAT+GGG | - | chr8_4:18740293-18740312 | Msa1317480:CDS | 50.0% |
| CGCCCGCCTAATGAATATGA+AGG | - | chr8_4:18740515-18740534 | Msa1317480:CDS | 50.0% | |
| AATCGGCAAACCTGATCGAC+CGG | - | chr8_4:18740560-18740579 | Msa1317480:CDS | 50.0% | |
| TTGATTATGCCCGGTCGATC+AGG | + | chr8_4:18740573-18740592 | None:intergenic | 50.0% | |
| GATCGACCGGGCATAATCAA+AGG | - | chr8_4:18740573-18740592 | Msa1317480:CDS | 50.0% | |
| GGACAATGGCAGCAGCTTCA+TGG | - | chr8_4:18740065-18740084 | Msa1317480:CDS | 55.0% | |
| GGATGCTTCAAAAGCCTCCC+GGG | - | chr8_4:18740142-18740161 | Msa1317480:CDS | 55.0% | |
| !! | GCCGCTAACCGAGGTTTTGA+CGG | - | chr8_4:18740320-18740339 | Msa1317480:CDS | 55.0% |
| CCCGTCAAAACCTCGGTTAG+CGG | + | chr8_4:18740324-18740343 | None:intergenic | 55.0% | |
| !! | CCGCTAACCGAGGTTTTGAC+GGG | - | chr8_4:18740321-18740340 | Msa1317480:CDS | 55.0% |
| !! | CGCTAACCGAGGTTTTGACG+GGG | - | chr8_4:18740322-18740341 | Msa1317480:CDS | 55.0% |
| !! | TAACCGAGGTTTTGACGGGG+TGG | - | chr8_4:18740325-18740344 | Msa1317480:CDS | 55.0% |
| TCTCCACCCCGTCAAAACCT+CGG | + | chr8_4:18740331-18740350 | None:intergenic | 55.0% | |
| !! | GTTTTCTGGTGGAACACCCC+CGG | + | chr8_4:18740409-18740428 | None:intergenic | 55.0% |
| ! | AACGCGTGACGGTTTTCTGG+TGG | + | chr8_4:18740420-18740439 | None:intergenic | 55.0% |
| ATCGGCAAACCTGATCGACC+GGG | - | chr8_4:18740561-18740580 | Msa1317480:CDS | 55.0% | |
| GGACAATGGCAGCAGCTTCA+TGG | - | chr8_4:18740065-18740084 | Msa1317480:CDS | 55.0% | |
| GGATGCTTCAAAAGCCTCCC+GGG | - | chr8_4:18740142-18740161 | Msa1317480:CDS | 55.0% | |
| !! | GCCGCTAACCGAGGTTTTGA+CGG | - | chr8_4:18740320-18740339 | Msa1317480:CDS | 55.0% |
| CCCGTCAAAACCTCGGTTAG+CGG | + | chr8_4:18740324-18740343 | None:intergenic | 55.0% | |
| !! | CCGCTAACCGAGGTTTTGAC+GGG | - | chr8_4:18740321-18740340 | Msa1317480:CDS | 55.0% |
| !! | CGCTAACCGAGGTTTTGACG+GGG | - | chr8_4:18740322-18740341 | Msa1317480:CDS | 55.0% |
| !! | TAACCGAGGTTTTGACGGGG+TGG | - | chr8_4:18740325-18740344 | Msa1317480:CDS | 55.0% |
| TCTCCACCCCGTCAAAACCT+CGG | + | chr8_4:18740331-18740350 | None:intergenic | 55.0% | |
| !! | GTTTTCTGGTGGAACACCCC+CGG | + | chr8_4:18740409-18740428 | None:intergenic | 55.0% |
| ! | AACGCGTGACGGTTTTCTGG+TGG | + | chr8_4:18740420-18740439 | None:intergenic | 55.0% |
| ATCGGCAAACCTGATCGACC+GGG | - | chr8_4:18740561-18740580 | Msa1317480:CDS | 55.0% | |
| !! | GAGGTTTTGACGGGGTGGAG+AGG | - | chr8_4:18740330-18740349 | Msa1317480:CDS | 60.0% |
| !! | GTTTTGACGGGGTGGAGAGG+TGG | - | chr8_4:18740333-18740352 | Msa1317480:CDS | 60.0% |
| CGGGCGCATGTCAGAGAACA+TGG | + | chr8_4:18740501-18740520 | None:intergenic | 60.0% | |
| !! | GAGGTTTTGACGGGGTGGAG+AGG | - | chr8_4:18740330-18740349 | Msa1317480:CDS | 60.0% |
| !! | GTTTTGACGGGGTGGAGAGG+TGG | - | chr8_4:18740333-18740352 | Msa1317480:CDS | 60.0% |
| CGGGCGCATGTCAGAGAACA+TGG | + | chr8_4:18740501-18740520 | None:intergenic | 60.0% | |
| ATGGGTGACGCCGCTAACCG+AGG | - | chr8_4:18740311-18740330 | Msa1317480:CDS | 65.0% | |
| ATGGGTGACGCCGCTAACCG+AGG | - | chr8_4:18740311-18740330 | Msa1317480:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 18739652 | 18740872 | 18739652 | ID=Msa1317480;Name=Msa1317480 |
| chr8_4 | mRNA | 18739652 | 18740872 | 18739652 | ID=Msa1317480-mRNA-1;Parent=Msa1317480;Name=Msa1317480-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|-1|0|1|-1|1|1|0|406 |
| chr8_4 | exon | 18739652 | 18740872 | 18739652 | ID=Msa1317480-mRNA-1:exon:6977;Parent=Msa1317480-mRNA-1 |
| chr8_4 | CDS | 18739652 | 18740872 | 18739652 | ID=Msa1317480-mRNA-1:cds;Parent=Msa1317480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
