Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1387590 | XP_013461948.1 | 91.295 | 471 | 11 | 2 | 1 | 442 | 1 | 470 | 0.0 | 809 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1387590 | sp|Q8L7A0|TAUE3_ARATH | 69.574 | 470 | 104 | 5 | 6 | 441 | 11 | 475 | 0.0 | 589 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1387590 | G7ZWM6 | 91.295 | 471 | 11 | 2 | 1 | 442 | 1 | 470 | 0.0 | 809 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1381540 | Msa1387590 | 0.978601 | 3.626260e-146 | -8.615850e-47 |
| Msa1387590 | Msa1451620 | -0.812449 | 4.215630e-51 | -8.615850e-47 |
| Msa0743120 | Msa1387590 | -0.801294 | 9.635594e-49 | -8.615850e-47 |
| Msa0180990 | Msa1387590 | -0.801952 | 7.063872e-49 | -8.615850e-47 |
| Msa0183010 | Msa1387590 | -0.835306 | 1.812089e-56 | -8.615850e-47 |
| Msa0230640 | Msa1387590 | -0.835893 | 1.287254e-56 | -8.615850e-47 |
| Msa1224580 | Msa1387590 | -0.825137 | 5.522545e-54 | -8.615850e-47 |
| Msa1262990 | Msa1387590 | -0.808185 | 3.506708e-50 | -8.615850e-47 |
| Msa1317480 | Msa1387590 | -0.817977 | 2.492338e-52 | -8.615850e-47 |
| Msa0381600 | Msa1387590 | -0.809216 | 2.111209e-50 | -8.615850e-47 |
| Msa0387280 | Msa1387590 | 0.811939 | 5.446884e-51 | -8.615850e-47 |
| Msa0392040 | Msa1387590 | -0.817840 | 2.676789e-52 | -8.615850e-47 |
| Msa0469940 | Msa1387590 | -0.800467 | 1.421897e-48 | -8.615850e-47 |
| Msa0279210 | Msa1387590 | -0.812345 | 4.443211e-51 | -8.615850e-47 |
| Msa0279250 | Msa1387590 | -0.801051 | 1.080447e-48 | -8.615850e-47 |
| Msa0318970 | Msa1387590 | -0.813069 | 3.084697e-51 | -8.615850e-47 |
| Msa1131670 | Msa1387590 | -0.822648 | 2.116595e-53 | -8.615850e-47 |
| Msa1144720 | Msa1387590 | -0.810928 | 9.032240e-51 | -8.615850e-47 |
| Msa1171730 | Msa1387590 | 0.814784 | 1.291317e-51 | -8.615850e-47 |
| Msa1177780 | Msa1387590 | 0.804964 | 1.677346e-49 | -8.615850e-47 |
| Msa1208650 | Msa1387590 | -0.846109 | 2.669056e-59 | -8.615850e-47 |
| Msa0521620 | Msa1387590 | 0.992866 | 6.106512e-196 | -8.615850e-47 |
| Msa0521740 | Msa1387590 | 0.819713 | 1.005391e-52 | -8.615850e-47 |
| Msa0862800 | Msa1387590 | -0.838238 | 3.238420e-57 | -8.615850e-47 |
| Msa0864470 | Msa1387590 | -0.814669 | 1.369792e-51 | -8.615850e-47 |
| Msa0881210 | Msa1387590 | -0.806536 | 7.843170e-50 | -8.615850e-47 |
| Msa0942550 | Msa1387590 | -0.813372 | 2.645950e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1387590 | MtrunA17_Chr3g0139541 | 91.295 | 471 | 11 | 2 | 1 | 442 | 1 | 470 | 0.0 | 809 |
| Msa1387590 | MtrunA17_Chr5g0403901 | 59.695 | 459 | 146 | 5 | 11 | 438 | 18 | 468 | 1.56e-166 | 476 |
| Msa1387590 | MtrunA17_Chr8g0373471 | 59.770 | 435 | 141 | 3 | 41 | 442 | 36 | 469 | 3.41e-164 | 471 |
| Msa1387590 | MtrunA17_Chr8g0380211 | 59.709 | 412 | 129 | 2 | 67 | 441 | 67 | 478 | 4.64e-145 | 422 |
| Msa1387590 | MtrunA17_Chr1g0157751 | 50.318 | 471 | 180 | 4 | 6 | 438 | 1 | 455 | 3.79e-144 | 419 |
| Msa1387590 | MtrunA17_Chr8g0380191 | 61.465 | 314 | 114 | 2 | 127 | 440 | 10 | 316 | 1.16e-120 | 354 |
| Msa1387590 | MtrunA17_Chr7g0265481 | 49.539 | 434 | 176 | 5 | 44 | 438 | 30 | 459 | 2.66e-118 | 353 |
| Msa1387590 | MtrunA17_Chr1g0179621 | 49.157 | 415 | 171 | 4 | 64 | 438 | 48 | 462 | 4.43e-111 | 335 |
| Msa1387590 | MtrunA17_Chr3g0139621 | 72.269 | 119 | 11 | 1 | 273 | 369 | 27 | 145 | 2.00e-39 | 139 |
| Msa1387590 | MtrunA17_Chr2g0280401 | 26.753 | 385 | 226 | 6 | 105 | 438 | 87 | 466 | 8.04e-37 | 140 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1387590 | AT2G25737.1 | 69.574 | 470 | 104 | 5 | 6 | 441 | 11 | 475 | 0.0 | 589 |
| Msa1387590 | AT2G25737.2 | 65.027 | 366 | 89 | 5 | 6 | 337 | 11 | 371 | 8.09e-145 | 418 |
| Msa1387590 | AT2G36630.1 | 47.229 | 415 | 181 | 6 | 62 | 438 | 42 | 456 | 1.07e-108 | 329 |
| Msa1387590 | AT1G11540.2 | 32.172 | 373 | 214 | 8 | 104 | 438 | 79 | 450 | 2.96e-39 | 147 |
| Msa1387590 | AT1G11540.1 | 32.337 | 368 | 210 | 8 | 109 | 438 | 1 | 367 | 3.46e-39 | 145 |
| Msa1387590 | AT1G61740.1 | 28.293 | 410 | 249 | 6 | 72 | 438 | 51 | 458 | 1.76e-35 | 137 |
| Msa1387590 | AT4G21250.1 | 29.557 | 406 | 239 | 5 | 73 | 438 | 51 | 449 | 5.60e-31 | 124 |
| Msa1387590 | AT4G21260.1 | 26.157 | 432 | 243 | 13 | 6 | 419 | 1 | 374 | 1.23e-29 | 119 |
Find 130 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAAGCTGTTGATTTCTTA+TGG | 0.163433 | tig0020912:+112658 | Msa1387590:CDS |
| CCTATGCTCAGTCTTATTAT+TGG | 0.208963 | tig0020912:+113035 | Msa1387590:CDS |
| TCAACAAAAGCATTCTTAAA+AGG | 0.210652 | tig0020912:+114469 | Msa1387590:CDS |
| GATTGCCGATCATGAATATA+TGG | 0.212904 | tig0020912:+116121 | Msa1387590:CDS |
| AATAAAAGAACACAATAATT+TGG | 0.213975 | tig0020912:-112188 | None:intergenic |
| CTACTTGCTGAAACGATTTC+CGG | 0.245240 | tig0020912:+115811 | Msa1387590:CDS |
| GAGATAGCAGTCGATGATTT+AGG | 0.245570 | tig0020912:-113065 | None:intergenic |
| CACATGCATCTTAATCTAAA+TGG | 0.262348 | tig0020912:-116377 | None:intergenic |
| CGGTATAATCGGTGGATTGC+TGG | 0.273239 | tig0020912:+115566 | Msa1387590:CDS |
| TGAAAATGAGATCCATATTA+TGG | 0.284097 | tig0020912:+112511 | Msa1387590:CDS |
| TGGAGTTGGCATTTCAAATA+TGG | 0.298396 | tig0020912:+116091 | Msa1387590:CDS |
| TAAGGAAACCATAATGAAAA+AGG | 0.303076 | tig0020912:+114507 | Msa1387590:CDS |
| AGAAGGCTGATCATCCTATT+TGG | 0.303986 | tig0020912:+116005 | Msa1387590:CDS |
| TAGCAACATCATCCATAATA+TGG | 0.305835 | tig0020912:-112523 | None:intergenic |
| ACTAGGAGGCGGATTTGTTA+TGG | 0.306710 | tig0020912:+115590 | Msa1387590:CDS |
| GTATTAGTAACATTAAAATT+TGG | 0.315047 | tig0020912:-112603 | None:intergenic |
| AAACGATTTCCGGTTCCTTA+TGG | 0.322506 | tig0020912:+115821 | Msa1387590:CDS |
| TTGGGTACTGAACTTGTTAC+AGG | 0.324749 | tig0020912:+115254 | Msa1387590:CDS |
| ATGTTGCAGGAAATGGAATT+TGG | 0.334185 | tig0020912:+112924 | Msa1387590:intron |
| TTTATCAGTGCAATCTCATT+AGG | 0.334595 | tig0020912:+116068 | Msa1387590:CDS |
| CTACATGTTCTGCAGCATAT+TGG | 0.346236 | tig0020912:+115235 | Msa1387590:CDS |
| TACATGTTCTGCAGCATATT+GGG | 0.353310 | tig0020912:+115236 | Msa1387590:CDS |
| TCAACGTTGTATTTCCTGAT+TGG | 0.361915 | tig0020912:+114308 | Msa1387590:CDS |
| AGGGCTTGAGACATGGAATA+AGG | 0.370713 | tig0020912:+114489 | Msa1387590:CDS |
| GCAGTTACCCCAACTGCAAT+TGG | 0.371672 | tig0020912:-115429 | None:intergenic |
| TTATTTCTTATCCTGATAGA+AGG | 0.371902 | tig0020912:+116272 | Msa1387590:three_prime_UTR |
| CTAGTCATCTATTGTGTGTT+TGG | 0.378183 | tig0020912:+115534 | Msa1387590:CDS |
| GTTTGGTGAAGAAGAAAATT+CGG | 0.390433 | tig0020912:-112392 | None:intergenic |
| GGTGGCTACTATTGCAGCCT+TGG | 0.391624 | tig0020912:+115965 | Msa1387590:CDS |
| CTCATCATCTTTATTCTAGC+TGG | 0.396070 | tig0020912:+116038 | Msa1387590:CDS |
| CTATTGTGTGTTTGGTGTGC+TGG | 0.405285 | tig0020912:+115542 | Msa1387590:CDS |
| CTAGGAGGCGGATTTGTTAT+GGG | 0.410693 | tig0020912:+115591 | Msa1387590:CDS |
| ACCATTTGATTCTTGTCTCC+TGG | 0.412224 | tig0020912:-114695 | None:intergenic |
| GAATATAAAGCTCTTCCAAC+TGG | 0.413552 | tig0020912:+114818 | Msa1387590:CDS |
| AATATAGTGACAAGCCAATC+AGG | 0.423808 | tig0020912:-114322 | None:intergenic |
| TGGATGATGTTGCTATTGTT+TGG | 0.424677 | tig0020912:+112531 | Msa1387590:CDS |
| TGCAGATCCCAATTGCAGTT+GGG | 0.427147 | tig0020912:+115421 | Msa1387590:intron |
| GCCAACTTAGCTCTTGGCCT+CGG | 0.430451 | tig0020912:-116240 | None:intergenic |
| TGAGAGATGCTCTTCCAAAT+AGG | 0.430670 | tig0020912:-116019 | None:intergenic |
| TCCACAGAAAATAAAGGAGC+AGG | 0.431843 | tig0020912:-112325 | None:intergenic |
| ACCAAGACTCGTGTTCTGTT+TGG | 0.434467 | tig0020912:-112409 | None:intergenic |
| GTTGGAGGTGTAGGTGGTGG+TGG | 0.435918 | tig0020912:+113002 | Msa1387590:CDS |
| GGTGTGCTGGCCGGTATAAT+CGG | 0.438441 | tig0020912:+115555 | Msa1387590:CDS |
| CAACAAAAGCATTCTTAAAA+GGG | 0.441289 | tig0020912:+114470 | Msa1387590:CDS |
| GCTACTATTGCAGCCTTGGT+TGG | 0.446086 | tig0020912:+115969 | Msa1387590:CDS |
| CTTCACGACGTTGGCGTGAA+GGG | 0.452707 | tig0020912:-112289 | None:intergenic |
| TGCATAAGTAGCCGAGTAAA+CGG | 0.452785 | tig0020912:+112096 | Msa1387590:five_prime_UTR |
| GCTAAATCATAGTCAATGAT+TGG | 0.453065 | tig0020912:-114235 | None:intergenic |
| GTTTGTTTCAGGTATGATCA+TGG | 0.467366 | tig0020912:+114153 | Msa1387590:intron |
| AAATGAAAATTGAGATTGAA+AGG | 0.468829 | tig0020912:-112234 | None:intergenic |
| TAATTTGGTTTGCAAAATGA+AGG | 0.474766 | tig0020912:-112173 | None:intergenic |
| ACCAAACAGAACACGAGTCT+TGG | 0.476954 | tig0020912:+112408 | Msa1387590:five_prime_UTR |
| CACAGCTCTTTACTTGAGCC+TGG | 0.479609 | tig0020912:+115944 | Msa1387590:intron |
| GGAAGTGTTGGAGGTGTAGG+TGG | 0.480918 | tig0020912:+112996 | Msa1387590:CDS |
| TTTGGAAGTGTTGGAGGTGT+AGG | 0.483068 | tig0020912:+112993 | Msa1387590:CDS |
| TTATGGAAATCAGATGGATC+GGG | 0.484509 | tig0020912:+112675 | Msa1387590:CDS |
| ATTCATTCTAGGAGGCTGCC+AGG | 0.485158 | tig0020912:+114677 | Msa1387590:intron |
| GAGGCAACTGCATTGTTCAC+AGG | 0.489298 | tig0020912:+115456 | Msa1387590:CDS |
| TATTCAGAGTTCCGTTTACT+CGG | 0.493138 | tig0020912:-112107 | None:intergenic |
| ACCGAGGCCAAGAGCTAAGT+TGG | 0.495274 | tig0020912:+116239 | Msa1387590:three_prime_UTR |
| ATCACGGCCAACTTAGCTCT+TGG | 0.504666 | tig0020912:-116246 | None:intergenic |
| TCTTCACGACGTTGGCGTGA+AGG | 0.504828 | tig0020912:-112290 | None:intergenic |
| CTTATGGAAATCAGATGGAT+CGG | 0.504898 | tig0020912:+112674 | Msa1387590:CDS |
| GGTATAATCGGTGGATTGCT+GGG | 0.505907 | tig0020912:+115567 | Msa1387590:CDS |
| AGTGTTGGAGGTGTAGGTGG+TGG | 0.506773 | tig0020912:+112999 | Msa1387590:CDS |
| ACCAAATGTTGCCATTGAAA+AGG | 0.507227 | tig0020912:+114841 | Msa1387590:CDS |
| ATAGCTTCTACTGGTGATCA+AGG | 0.508677 | tig0020912:+115489 | Msa1387590:CDS |
| CTCATGCTTGGTATCAGCAT+TGG | 0.509084 | tig0020912:+114277 | Msa1387590:CDS |
| GATTTCTTATGGAAATCAGA+TGG | 0.512178 | tig0020912:+112669 | Msa1387590:CDS |
| CAGTTACCCCAACTGCAATT+GGG | 0.512495 | tig0020912:-115428 | None:intergenic |
| ATTGCCGATCATGAATATAT+GGG | 0.513117 | tig0020912:+116122 | Msa1387590:CDS |
| ATGCAGATCCCAATTGCAGT+TGG | 0.515311 | tig0020912:+115420 | Msa1387590:intron |
| GGAGCTGCGTTTGGAAGTGT+TGG | 0.516172 | tig0020912:+112984 | Msa1387590:CDS |
| GCAATCTCATTAGGTGGAGT+TGG | 0.517080 | tig0020912:+116077 | Msa1387590:CDS |
| ATGGCAACATTTGGTCCAGT+TGG | 0.520257 | tig0020912:-114833 | None:intergenic |
| TTTGGTTGGCAAATTGTGTT+GGG | 0.522022 | tig0020912:+112942 | Msa1387590:CDS |
| ATTTGGTTGGCAAATTGTGT+TGG | 0.522888 | tig0020912:+112941 | Msa1387590:CDS |
| TTTGTTTCAGGTATGATCAT+GGG | 0.526377 | tig0020912:+114154 | Msa1387590:intron |
| CGGAACGAACCATAAGGAAC+CGG | 0.527270 | tig0020912:-115830 | None:intergenic |
| CAGCAATCCACCGATTATAC+CGG | 0.529187 | tig0020912:-115565 | None:intergenic |
| AATGAAAATTGAGATTGAAA+GGG | 0.530652 | tig0020912:-112233 | None:intergenic |
| GGGTTATCAACACGTGTGGC+CGG | 0.530852 | tig0020912:+112695 | Msa1387590:CDS |
| TTTGAGAATATCTGCAAGTA+CGG | 0.532267 | tig0020912:+116146 | Msa1387590:CDS |
| TCTTAAAAGGGCTTGAGACA+TGG | 0.533780 | tig0020912:+114482 | Msa1387590:CDS |
| AGGTAGGATGTCTCAGCCTA+AGG | 0.536545 | tig0020912:-114204 | None:intergenic |
| GATTGAAAGGGAAGAAATGA+TGG | 0.537920 | tig0020912:-112221 | None:intergenic |
| TGTGTGTTTGGTGTGCTGGC+CGG | 0.542939 | tig0020912:+115546 | Msa1387590:CDS |
| TAATAATTTCTTCACGACGT+TGG | 0.544698 | tig0020912:-112298 | None:intergenic |
| AGAAGAGTGATAGCTTCTAC+TGG | 0.546881 | tig0020912:+115480 | Msa1387590:CDS |
| TACGGAATCACTCCATCACT+TGG | 0.549675 | tig0020912:-116313 | None:intergenic |
| GCCAGGAGACAAGAATCAAA+TGG | 0.550110 | tig0020912:+114694 | Msa1387590:CDS |
| GGATTGCTGGGACTAGGAGG+CGG | 0.552188 | tig0020912:+115579 | Msa1387590:CDS |
| CACAATATGTTGTCCAACCA+AGG | 0.555321 | tig0020912:-115982 | None:intergenic |
| ATAAGTTTCTGAGTTTCCTA+CGG | 0.556116 | tig0020912:-116331 | None:intergenic |
| GGAGAATGTCATTGCGAAAG+TGG | 0.557248 | tig0020912:-115765 | None:intergenic |
| CTCCTCGTCTATGTCTGTTG+TGG | 0.560055 | tig0020912:+115784 | Msa1387590:CDS |
| TGCAGGAAATGGAATTTGGT+TGG | 0.562713 | tig0020912:+112928 | Msa1387590:intron |
| GCAGATCCCAATTGCAGTTG+GGG | 0.562723 | tig0020912:+115422 | Msa1387590:intron |
| CAAGGGAAAGCATTTACAGT+TGG | 0.564981 | tig0020912:+115507 | Msa1387590:CDS |
| ATTCAACCTATGCTCATGCT+TGG | 0.566741 | tig0020912:+114265 | Msa1387590:CDS |
| GTTTGAAACTTACTTGAGGA+GGG | 0.568900 | tig0020912:-115638 | None:intergenic |
| CAACTGTCTACTACAACCTT+AGG | 0.569715 | tig0020912:+114188 | Msa1387590:CDS |
| ATCGGTGGATTGCTGGGACT+AGG | 0.570311 | tig0020912:+115573 | Msa1387590:CDS |
| AAATCCCATATATTCATGAT+CGG | 0.571395 | tig0020912:-116126 | None:intergenic |
| ACACACAATAGATGACTAGC+TGG | 0.573367 | tig0020912:-115530 | None:intergenic |
| GCTGCGTTTGGAAGTGTTGG+AGG | 0.574281 | tig0020912:+112987 | Msa1387590:CDS |
| GTGAAGAAGAAAATTCGGAC+AGG | 0.578014 | tig0020912:-112387 | None:intergenic |
| ATCAGTGCAATCTCATTAGG+TGG | 0.579952 | tig0020912:+116071 | Msa1387590:CDS |
| AGGCAACTGCATTGTTCACA+GGG | 0.582240 | tig0020912:+115457 | Msa1387590:CDS |
| AGTTTGAAACTTACTTGAGG+AGG | 0.587517 | tig0020912:-115639 | None:intergenic |
| GTCAATGATTGGCATATCCA+AGG | 0.593318 | tig0020912:-114224 | None:intergenic |
| TGTCATTGCGAAAGTGGCTG+TGG | 0.598176 | tig0020912:-115759 | None:intergenic |
| GGTGGATTGCTGGGACTAGG+AGG | 0.603818 | tig0020912:+115576 | Msa1387590:CDS |
| GGATAAGAAATAATCTATCA+CGG | 0.610056 | tig0020912:-116262 | None:intergenic |
| ATGATTGGCATATCCAAGGT+AGG | 0.612586 | tig0020912:-114220 | None:intergenic |
| CTGATACCAAGCATGAGCAT+AGG | 0.621971 | tig0020912:-114271 | None:intergenic |
| TATTCAAAAGCTGCGAACCG+AGG | 0.622984 | tig0020912:+116223 | Msa1387590:three_prime_UTR |
| TAGGCTGAGACATCCTACCT+TGG | 0.634297 | tig0020912:+114207 | Msa1387590:CDS |
| AGGCTGCAATAGTAGCCACC+AGG | 0.634890 | tig0020912:-115962 | None:intergenic |
| AGTTGGGGTAACTGCGTACG+AGG | 0.636664 | tig0020912:+115437 | Msa1387590:CDS |
| CCAATAATAAGACTGAGCAT+AGG | 0.644853 | tig0020912:-113035 | None:intergenic |
| TAGCTTCTACTGGTGATCAA+GGG | 0.646261 | tig0020912:+115490 | Msa1387590:CDS |
| TTGGACAACATATTGTGAGA+AGG | 0.670015 | tig0020912:+115988 | Msa1387590:CDS |
| GATCGGGTTATCAACACGTG+TGG | 0.675635 | tig0020912:+112691 | Msa1387590:CDS |
| GTGCTGGCCGGTATAATCGG+TGG | 0.677338 | tig0020912:+115558 | Msa1387590:CDS |
| AAGTGATGGAGTGATTCCGT+AGG | 0.682504 | tig0020912:+116315 | Msa1387590:three_prime_UTR |
| AGCTCTTTACTTGAGCCTGG+TGG | 0.686286 | tig0020912:+115947 | Msa1387590:intron |
| TGCCATTGAAAAGGAAAACG+AGG | 0.701492 | tig0020912:+114850 | Msa1387590:CDS |
| TTCCACAACAGACATAGACG+AGG | 0.749880 | tig0020912:-115786 | None:intergenic |
| GGAACTCTGAATATCACACG+CGG | 0.790116 | tig0020912:+112117 | Msa1387590:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATAATAATTTAAAAAAA+AGG | + | tig0020912:113568-113587 | Msa1387590:intron | 0.0% |
| !!! | ATAATAATATTTTATTAAAA+TGG | + | tig0020912:113595-113614 | Msa1387590:intron | 0.0% |
| !! | AAAAAAAAAAAATATTAATA+TGG | + | tig0020912:113737-113756 | Msa1387590:intron | 0.0% |
| !! | AAAAAATATTAATATGGTAA+AGG | + | tig0020912:113743-113762 | Msa1387590:intron | 10.0% |
| !! | TTCCATATTTAATAATAATT+TGG | + | tig0020912:114907-114926 | Msa1387590:intron | 10.0% |
| !! | TACCAAATTATTATTAAATA+TGG | - | tig0020912:114912-114931 | None:intergenic | 10.0% |
| !! | AATAAAAGAACACAATAATT+TGG | - | tig0020912:112191-112210 | None:intergenic | 15.0% |
| !! | GTATTAGTAACATTAAAATT+TGG | - | tig0020912:112606-112625 | None:intergenic | 15.0% |
| !! | AAAAGATAAATAGTAGTATT+TGG | + | tig0020912:112786-112805 | Msa1387590:intron | 15.0% |
| !! | AAATAATTATCTGAAAGTAA+CGG | - | tig0020912:113231-113250 | None:intergenic | 15.0% |
| !! | TTTCAAAAGAGATATTATAA+TGG | + | tig0020912:113506-113525 | Msa1387590:intron | 15.0% |
| !! | TTCAAAAGAGATATTATAAT+GGG | + | tig0020912:113507-113526 | Msa1387590:intron | 15.0% |
| !! | AATTGTTTACTAAATGATAA+GGG | - | tig0020912:113544-113563 | None:intergenic | 15.0% |
| !! | TAATTGTTTACTAAATGATA+AGG | - | tig0020912:113545-113564 | None:intergenic | 15.0% |
| !! | AATTGAATTATCTAAGAAAA+TGG | - | tig0020912:113876-113895 | None:intergenic | 15.0% |
| !!! | ATTTTCTTAGATAATTCAAT+TGG | + | tig0020912:113875-113894 | Msa1387590:intron | 15.0% |
| !!! | AATTTTTTTTACTCTTATGT+AGG | + | tig0020912:114442-114461 | Msa1387590:intron | 15.0% |
| !! | CTATAATTGAAAATGTATAT+TGG | + | tig0020912:115062-115081 | Msa1387590:intron | 15.0% |
| !! | ATTAATTGAAAGTTATAAAC+TGG | - | tig0020912:115183-115202 | None:intergenic | 15.0% |
| !!! | CTTTTTATAATATTCAGTTT+TGG | + | tig0020912:115877-115896 | Msa1387590:intron | 15.0% |
| !! | AATGAAAATTGAGATTGAAA+GGG | - | tig0020912:112236-112255 | None:intergenic | 20.0% |
| !! | AAATGAAAATTGAGATTGAA+AGG | - | tig0020912:112237-112256 | None:intergenic | 20.0% |
| !!! | TATTTTTCCACAGAAAATAA+AGG | - | tig0020912:112334-112353 | None:intergenic | 20.0% |
| !! | AATTCAAAGAACAAAAAACA+TGG | + | tig0020912:112482-112501 | Msa1387590:exon | 20.0% |
| !! | ATTCAAAGAACAAAAAACAT+GGG | + | tig0020912:112483-112502 | Msa1387590:exon | 20.0% |
| !!! | TTATTTCTTTCTGAATTCTA+TGG | + | tig0020912:112821-112840 | Msa1387590:intron | 20.0% |
| !! | TAATTATTTCAACCACTTAA+CGG | + | tig0020912:113242-113261 | Msa1387590:intron | 20.0% |
| !! | TTATATCTTATGTCCAAATT+TGG | - | tig0020912:113356-113375 | None:intergenic | 20.0% |
| !! | TAAGAGTAAAAAAAATTCAG+AGG | - | tig0020912:114439-114458 | None:intergenic | 20.0% |
| !! | AAACATTTATTTGTTCACAA+TGG | - | tig0020912:114582-114601 | None:intergenic | 20.0% |
| !!! | TACCTATTTTAATTCATTCT+AGG | + | tig0020912:114666-114685 | Msa1387590:intron | 20.0% |
| !!! | GAGTTTATTCAATTTCTTTT+TGG | + | tig0020912:114783-114802 | Msa1387590:intron | 20.0% |
| !!! | TATTCAATTTCTTTTTGGTT+AGG | + | tig0020912:114788-114807 | Msa1387590:intron | 20.0% |
| !! | AATTGAAAATGTATATTGGA+AGG | + | tig0020912:115066-115085 | Msa1387590:intron | 20.0% |
| !! | GTTACAAGTTACAAAAATAT+CGG | + | tig0020912:115365-115384 | Msa1387590:intron | 20.0% |
| !!! | TAATTTGGTTTGCAAAATGA+AGG | - | tig0020912:112176-112195 | None:intergenic | 25.0% |
| ! | TGAAAATGAGATCCATATTA+TGG | + | tig0020912:112511-112530 | Msa1387590:CDS | 25.0% |
| !! | TATTTTCACAAGCTTTCTTT+CGG | - | tig0020912:112577-112596 | None:intergenic | 25.0% |
| !!! | TTGTTTATTTGTTATGTTGC+AGG | + | tig0020912:112911-112930 | Msa1387590:intron | 25.0% |
| ! | TGAACCTTGTACAATTAAAT+TGG | + | tig0020912:113159-113178 | Msa1387590:intron | 25.0% |
| ! | AGAGAATTAAATGCTTATCA+AGG | + | tig0020912:113281-113300 | Msa1387590:intron | 25.0% |
| ! | CTTGTATGGTCAAAAAATTT+GGG | - | tig0020912:113463-113482 | None:intergenic | 25.0% |
| ! | TCTTGTATGGTCAAAAAATT+TGG | - | tig0020912:113464-113483 | None:intergenic | 25.0% |
| !! | CTAAATATATGACTCTTTTC+CGG | - | tig0020912:113796-113815 | None:intergenic | 25.0% |
| ! | GGAAAAGAGTCATATATTTA+GGG | + | tig0020912:113795-113814 | Msa1387590:intron | 25.0% |
| !!! | CAGGGATAATTTAGTTTTTA+AGG | - | tig0020912:114061-114080 | None:intergenic | 25.0% |
| !! | TTGCTTATTGTTCTTTTCTT+AGG | + | tig0020912:114343-114362 | Msa1387590:CDS | 25.0% |
| !!! | TCAACAAAAGCATTCTTAAA+AGG | + | tig0020912:114469-114488 | Msa1387590:CDS | 25.0% |
| !!! | CAACAAAAGCATTCTTAAAA+GGG | + | tig0020912:114470-114489 | Msa1387590:CDS | 25.0% |
| ! | TAAGGAAACCATAATGAAAA+AGG | + | tig0020912:114507-114526 | Msa1387590:CDS | 25.0% |
| !!! | AAATGAGACCTTTTTCATTA+TGG | - | tig0020912:114518-114537 | None:intergenic | 25.0% |
| ! | CTCCTAGAATGAATTAAAAT+AGG | - | tig0020912:114671-114690 | None:intergenic | 25.0% |
| !!! | CTATTTTAATTCATTCTAGG+AGG | + | tig0020912:114669-114688 | Msa1387590:intron | 25.0% |
| !!! | AGGACAACTTTATTTTGTTT+TGG | - | tig0020912:114739-114758 | None:intergenic | 25.0% |
| ! | AAAACAAAATAAAGTTGTCC+TGG | + | tig0020912:114738-114757 | Msa1387590:intron | 25.0% |
| ! | GTACAAGAGACTATTATATT+GGG | + | tig0020912:114872-114891 | Msa1387590:intron | 25.0% |
| ! | TACAAGAGACTATTATATTG+GGG | + | tig0020912:114873-114892 | Msa1387590:intron | 25.0% |
| ! | TCAATAATGTGTCAAATTAG+TGG | - | tig0020912:115015-115034 | None:intergenic | 25.0% |
| ! | ATAATAATTCGTTCAATTGC+AGG | + | tig0020912:115036-115055 | Msa1387590:intron | 25.0% |
| ! | AAATCCCATATATTCATGAT+CGG | - | tig0020912:116129-116148 | None:intergenic | 25.0% |
| ! | GGATAAGAAATAATCTATCA+CGG | - | tig0020912:116265-116284 | None:intergenic | 25.0% |
| !! | TTATTTCTTATCCTGATAGA+AGG | + | tig0020912:116272-116291 | Msa1387590:three_prime_UTR | 25.0% |
| ! | AAAAAATTACACCTTCTATC+AGG | - | tig0020912:116286-116305 | None:intergenic | 25.0% |
| !! | TTTTTATTATTGCCAAGTGA+TGG | + | tig0020912:116301-116320 | Msa1387590:three_prime_UTR | 25.0% |
| TAATAATTTCTTCACGACGT+TGG | - | tig0020912:112301-112320 | None:intergenic | 30.0% | |
| ! | GTTTGGTGAAGAAGAAAATT+CGG | - | tig0020912:112395-112414 | None:intergenic | 30.0% |
| TAGCAACATCATCCATAATA+TGG | - | tig0020912:112526-112545 | None:intergenic | 30.0% | |
| !! | CAAAAGCTGTTGATTTCTTA+TGG | + | tig0020912:112658-112677 | Msa1387590:CDS | 30.0% |
| GATTTCTTATGGAAATCAGA+TGG | + | tig0020912:112669-112688 | Msa1387590:CDS | 30.0% | |
| ACAGAAAAGTGAAATCTTAC+CGG | - | tig0020912:112717-112736 | None:intergenic | 30.0% | |
| !! | GTAAGATTTCACTTTTCTGT+TGG | + | tig0020912:112717-112736 | Msa1387590:intron | 30.0% |
| !! | ATTTGTTATGTTGCAGGAAA+TGG | + | tig0020912:112917-112936 | Msa1387590:intron | 30.0% |
| !!! | ATTGTGTTGGGTAGTTTTAT+TGG | + | tig0020912:112954-112973 | Msa1387590:CDS | 30.0% |
| !!! | GGTAGTTTTATTGGATTTTG+TGG | + | tig0020912:112963-112982 | Msa1387590:CDS | 30.0% |
| GAGACCAATTTAATTGTACA+AGG | - | tig0020912:113166-113185 | None:intergenic | 30.0% | |
| AGTACTCCAAAATACTTGTA+TGG | + | tig0020912:113329-113348 | Msa1387590:intron | 30.0% | |
| ! | TTTGGACCATACAAGTATTT+TGG | - | tig0020912:113338-113357 | None:intergenic | 30.0% |
| ATACTTGTATGGTCCAAATT+TGG | + | tig0020912:113340-113359 | Msa1387590:intron | 30.0% | |
| AGTATAGAGAAACTCTTGTA+TGG | - | tig0020912:113477-113496 | None:intergenic | 30.0% | |
| CTTAGAGTATGTTTCTTACA+AGG | + | tig0020912:113682-113701 | Msa1387590:intron | 30.0% | |
| TGTTCATAGTAGATACATTC+CGG | + | tig0020912:113774-113793 | Msa1387590:intron | 30.0% | |
| CGGAAAAGAGTCATATATTT+AGG | + | tig0020912:113794-113813 | Msa1387590:intron | 30.0% | |
| AAGCTAATGATTGAAGAAGT+TGG | + | tig0020912:113901-113920 | Msa1387590:intron | 30.0% | |
| ATTGAAGAAGTTGGAAAATC+CGG | + | tig0020912:113910-113929 | Msa1387590:intron | 30.0% | |
| TTTAGTATTGTTCCTGAATC+CGG | - | tig0020912:113932-113951 | None:intergenic | 30.0% | |
| AGCTTATTTATGCTTGTTTG+TGG | - | tig0020912:114029-114048 | None:intergenic | 30.0% | |
| CTCTCTTTGATTAATGTTCA+GGG | - | tig0020912:114079-114098 | None:intergenic | 30.0% | |
| TCTCTCTTTGATTAATGTTC+AGG | - | tig0020912:114080-114099 | None:intergenic | 30.0% | |
| ! | TTTGTTTCAGGTATGATCAT+GGG | + | tig0020912:114154-114173 | Msa1387590:intron | 30.0% |
| GCTAAATCATAGTCAATGAT+TGG | - | tig0020912:114238-114257 | None:intergenic | 30.0% | |
| GAAGAAGACAGTTGAATTAA+TGG | - | tig0020912:114372-114391 | None:intergenic | 30.0% | |
| TCTGACATCAGGAAAAATAA+TGG | - | tig0020912:114765-114784 | None:intergenic | 30.0% | |
| ATTGAATAAACTCTGACATC+AGG | - | tig0020912:114776-114795 | None:intergenic | 30.0% | |
| !!! | ATTTCTTTTTGGTTAGGTTC+AGG | + | tig0020912:114794-114813 | Msa1387590:intron | 30.0% |
| GGTACAAGAGACTATTATAT+TGG | + | tig0020912:114871-114890 | Msa1387590:intron | 30.0% | |
| ACAAGAGACTATTATATTGG+GGG | + | tig0020912:114874-114893 | Msa1387590:intron | 30.0% | |
| !! | TTAGTGTCACTTTGATCAAA+TGG | - | tig0020912:114939-114958 | None:intergenic | 30.0% |
| TTTGATCAAAGTGACACTAA+TGG | + | tig0020912:114939-114958 | Msa1387590:intron | 30.0% | |
| AATGTATATTGGAAGGAGTT+TGG | + | tig0020912:115073-115092 | Msa1387590:intron | 30.0% | |
| ATGTATATTGGAAGGAGTTT+GGG | + | tig0020912:115074-115093 | Msa1387590:intron | 30.0% | |
| AGCATGATTCCTAATTGAAT+CGG | + | tig0020912:115711-115730 | Msa1387590:intron | 30.0% | |
| ! | TCACATTTCAAAAAGTGCAT+TGG | - | tig0020912:115922-115941 | None:intergenic | 30.0% |
| TTTATCAGTGCAATCTCATT+AGG | + | tig0020912:116068-116087 | Msa1387590:CDS | 30.0% | |
| ATTGCCGATCATGAATATAT+GGG | + | tig0020912:116122-116141 | Msa1387590:CDS | 30.0% | |
| TTTGAGAATATCTGCAAGTA+CGG | + | tig0020912:116146-116165 | Msa1387590:CDS | 30.0% | |
| ATAAGTTTCTGAGTTTCCTA+CGG | - | tig0020912:116334-116353 | None:intergenic | 30.0% | |
| CACATGCATCTTAATCTAAA+TGG | - | tig0020912:116380-116399 | None:intergenic | 30.0% | |
| TATTCAGAGTTCCGTTTACT+CGG | - | tig0020912:112110-112129 | None:intergenic | 35.0% | |
| GATTGAAAGGGAAGAAATGA+TGG | - | tig0020912:112224-112243 | None:intergenic | 35.0% | |
| ! | ACAGGTAGAACTGAATTTTC+GGG | - | tig0020912:112372-112391 | None:intergenic | 35.0% |
| ! | GACAGGTAGAACTGAATTTT+CGG | - | tig0020912:112373-112392 | None:intergenic | 35.0% |
| ! | TGGATGATGTTGCTATTGTT+TGG | + | tig0020912:112531-112550 | Msa1387590:CDS | 35.0% |
| CTTATGGAAATCAGATGGAT+CGG | + | tig0020912:112674-112693 | Msa1387590:CDS | 35.0% | |
| TTATGGAAATCAGATGGATC+GGG | + | tig0020912:112675-112694 | Msa1387590:CDS | 35.0% | |
| TTCGTCAGTTATTGTAGCTT+TGG | + | tig0020912:112877-112896 | Msa1387590:intron | 35.0% | |
| TCGTCAGTTATTGTAGCTTT+GGG | + | tig0020912:112878-112897 | Msa1387590:intron | 35.0% | |
| ATGTTGCAGGAAATGGAATT+TGG | + | tig0020912:112924-112943 | Msa1387590:intron | 35.0% | |
| ATTTGGTTGGCAAATTGTGT+TGG | + | tig0020912:112941-112960 | Msa1387590:CDS | 35.0% | |
| TTTGGTTGGCAAATTGTGTT+GGG | + | tig0020912:112942-112961 | Msa1387590:CDS | 35.0% | |
| CCAATAATAAGACTGAGCAT+AGG | - | tig0020912:113038-113057 | None:intergenic | 35.0% | |
| !! | CCTATGCTCAGTCTTATTAT+TGG | + | tig0020912:113035-113054 | Msa1387590:CDS | 35.0% |
| AGAATCACGTGTCTTACATT+TGG | - | tig0020912:113090-113109 | None:intergenic | 35.0% | |
| ATTCTCTACGTGTTCTCTTT+CGG | - | tig0020912:113268-113287 | None:intergenic | 35.0% | |
| TACAAGGTCTCAAATTCGAT+AGG | + | tig0020912:113698-113717 | Msa1387590:intron | 35.0% | |
| !! | TGTATCTCAAACTCTGGTTT+TGG | - | tig0020912:113978-113997 | None:intergenic | 35.0% |
| !! | GTTTGAGATACACTGGATTT+TGG | + | tig0020912:113986-114005 | Msa1387590:intron | 35.0% |
| TAGCGTGTTATGTTTGTTTC+AGG | + | tig0020912:114142-114161 | Msa1387590:intron | 35.0% | |
| ! | GTTTGTTTCAGGTATGATCA+TGG | + | tig0020912:114153-114172 | Msa1387590:intron | 35.0% |
| TCAACGTTGTATTTCCTGAT+TGG | + | tig0020912:114308-114327 | Msa1387590:CDS | 35.0% | |
| AATATAGTGACAAGCCAATC+AGG | - | tig0020912:114325-114344 | None:intergenic | 35.0% | |
| ATCAGGAAAAATAATGGTCC+AGG | - | tig0020912:114759-114778 | None:intergenic | 35.0% | |
| GAATATAAAGCTCTTCCAAC+TGG | + | tig0020912:114818-114837 | Msa1387590:CDS | 35.0% | |
| ACCAAATGTTGCCATTGAAA+AGG | + | tig0020912:114841-114860 | Msa1387590:CDS | 35.0% | |
| ! | TCCTTTTCAATGGCAACATT+TGG | - | tig0020912:114845-114864 | None:intergenic | 35.0% |
| ! | TACCTCGTTTTCCTTTTCAA+TGG | - | tig0020912:114855-114874 | None:intergenic | 35.0% |
| TTGTCCTTCTAATCCAATGA+CGG | - | tig0020912:114985-115004 | None:intergenic | 35.0% | |
| TACATGTTCTGCAGCATATT+GGG | + | tig0020912:115236-115255 | Msa1387590:CDS | 35.0% | |
| ACAGGTAAATTTACCTCTAG+TGG | + | tig0020912:115272-115291 | Msa1387590:intron | 35.0% | |
| AAGAAAAGCAAATCCACTAG+AGG | - | tig0020912:115288-115307 | None:intergenic | 35.0% | |
| CTAGTCATCTATTGTGTGTT+TGG | + | tig0020912:115534-115553 | Msa1387590:CDS | 35.0% | |
| ! | GTTTGAAACTTACTTGAGGA+GGG | - | tig0020912:115641-115660 | None:intergenic | 35.0% |
| ! | AGTTTGAAACTTACTTGAGG+AGG | - | tig0020912:115642-115661 | None:intergenic | 35.0% |
| ! | TGCAGTTTGAAACTTACTTG+AGG | - | tig0020912:115645-115664 | None:intergenic | 35.0% |
| AGAAGACATCCGATTCAATT+AGG | - | tig0020912:115723-115742 | None:intergenic | 35.0% | |
| AAGTAAGTTAGAAGCTATCG+CGG | - | tig0020912:115853-115872 | None:intergenic | 35.0% | |
| TTGGACAACATATTGTGAGA+AGG | + | tig0020912:115988-116007 | Msa1387590:CDS | 35.0% | |
| CTCATCATCTTTATTCTAGC+TGG | + | tig0020912:116038-116057 | Msa1387590:CDS | 35.0% | |
| TGGAGTTGGCATTTCAAATA+TGG | + | tig0020912:116091-116110 | Msa1387590:CDS | 35.0% | |
| GATTGCCGATCATGAATATA+TGG | + | tig0020912:116121-116140 | Msa1387590:CDS | 35.0% | |
| TGCATAAGTAGCCGAGTAAA+CGG | + | tig0020912:112096-112115 | Msa1387590:five_prime_UTR | 40.0% | |
| TCCACAGAAAATAAAGGAGC+AGG | - | tig0020912:112328-112347 | None:intergenic | 40.0% | |
| GTGAAGAAGAAAATTCGGAC+AGG | - | tig0020912:112390-112409 | None:intergenic | 40.0% | |
| !! | TATTGTAGCTTTGGGTGATG+TGG | + | tig0020912:112886-112905 | Msa1387590:intron | 40.0% |
| TGCAGGAAATGGAATTTGGT+TGG | + | tig0020912:112928-112947 | Msa1387590:intron | 40.0% | |
| GAGATAGCAGTCGATGATTT+AGG | - | tig0020912:113068-113087 | None:intergenic | 40.0% | |
| AAGTTGGAAAATCCGGATTC+AGG | + | tig0020912:113917-113936 | Msa1387590:intron | 40.0% | |
| !!! | CTCAAACTCTGGTTTTGGAT+AGG | - | tig0020912:113973-113992 | None:intergenic | 40.0% |
| ! | AACCAGAGTTTGAGATACAC+TGG | + | tig0020912:113979-113998 | Msa1387590:intron | 40.0% |
| ATCCAGTGTATCTCAAACTC+TGG | - | tig0020912:113984-114003 | None:intergenic | 40.0% | |
| AGAGAACATTTGCAGCTTCT+TGG | + | tig0020912:114095-114114 | Msa1387590:intron | 40.0% | |
| CAACTGTCTACTACAACCTT+AGG | + | tig0020912:114188-114207 | Msa1387590:CDS | 40.0% | |
| ATGATTGGCATATCCAAGGT+AGG | - | tig0020912:114223-114242 | None:intergenic | 40.0% | |
| GTCAATGATTGGCATATCCA+AGG | - | tig0020912:114227-114246 | None:intergenic | 40.0% | |
| ATTCAACCTATGCTCATGCT+TGG | + | tig0020912:114265-114284 | Msa1387590:CDS | 40.0% | |
| TCTTAAAAGGGCTTGAGACA+TGG | + | tig0020912:114482-114501 | Msa1387590:CDS | 40.0% | |
| ACCATTTGATTCTTGTCTCC+TGG | - | tig0020912:114698-114717 | None:intergenic | 40.0% | |
| TGCCATTGAAAAGGAAAACG+AGG | + | tig0020912:114850-114869 | Msa1387590:CDS | 40.0% | |
| AGAGACTATTATATTGGGGG+AGG | + | tig0020912:114877-114896 | Msa1387590:intron | 40.0% | |
| GAGACTATTATATTGGGGGA+GGG | + | tig0020912:114878-114897 | Msa1387590:intron | 40.0% | |
| AAAGTGACACTAATGGTCTC+TGG | + | tig0020912:114946-114965 | Msa1387590:intron | 40.0% | |
| AGGAATTTGAACTCCGTCAT+TGG | + | tig0020912:114969-114988 | Msa1387590:intron | 40.0% | |
| ! | AACTCCGTCATTGGATTAGA+AGG | + | tig0020912:114978-114997 | Msa1387590:intron | 40.0% |
| TGTGATGACAGAACAAACCT+TGG | - | tig0020912:115143-115162 | None:intergenic | 40.0% | |
| CTACATGTTCTGCAGCATAT+TGG | + | tig0020912:115235-115254 | Msa1387590:CDS | 40.0% | |
| !! | TTGGGTACTGAACTTGTTAC+AGG | + | tig0020912:115254-115273 | Msa1387590:CDS | 40.0% |
| AGAAGAGTGATAGCTTCTAC+TGG | + | tig0020912:115480-115499 | Msa1387590:CDS | 40.0% | |
| ATAGCTTCTACTGGTGATCA+AGG | + | tig0020912:115489-115508 | Msa1387590:CDS | 40.0% | |
| TAGCTTCTACTGGTGATCAA+GGG | + | tig0020912:115490-115509 | Msa1387590:CDS | 40.0% | |
| !! | CAAGGGAAAGCATTTACAGT+TGG | + | tig0020912:115507-115526 | Msa1387590:CDS | 40.0% |
| ACACACAATAGATGACTAGC+TGG | - | tig0020912:115533-115552 | None:intergenic | 40.0% | |
| !! | ACTCCTAGCTCTAGAAAAAG+TGG | - | tig0020912:115618-115637 | None:intergenic | 40.0% |
| TTTGATGAGCAGGATAAGAG+AGG | - | tig0020912:115682-115701 | None:intergenic | 40.0% | |
| TATCCTGCTCATCAAACAGT+TGG | + | tig0020912:115686-115705 | Msa1387590:intron | 40.0% | |
| TAACCAACTGTTTGATGAGC+AGG | - | tig0020912:115692-115711 | None:intergenic | 40.0% | |
| ! | CTACTTGCTGAAACGATTTC+CGG | + | tig0020912:115811-115830 | Msa1387590:CDS | 40.0% |
| AAACGATTTCCGGTTCCTTA+TGG | + | tig0020912:115821-115840 | Msa1387590:CDS | 40.0% | |
| CACAATATGTTGTCCAACCA+AGG | - | tig0020912:115985-116004 | None:intergenic | 40.0% | |
| AGAAGGCTGATCATCCTATT+TGG | + | tig0020912:116005-116024 | Msa1387590:CDS | 40.0% | |
| TGAGAGATGCTCTTCCAAAT+AGG | - | tig0020912:116022-116041 | None:intergenic | 40.0% | |
| ATCAGTGCAATCTCATTAGG+TGG | + | tig0020912:116071-116090 | Msa1387590:CDS | 40.0% | |
| GGAACTCTGAATATCACACG+CGG | + | tig0020912:112117-112136 | Msa1387590:five_prime_UTR | 45.0% | |
| !!! | GCCTGCTCCTTTATTTTCTG+TGG | + | tig0020912:112324-112343 | Msa1387590:five_prime_UTR | 45.0% |
| ACCAAACAGAACACGAGTCT+TGG | + | tig0020912:112408-112427 | Msa1387590:five_prime_UTR | 45.0% | |
| ACCAAGACTCGTGTTCTGTT+TGG | - | tig0020912:112412-112431 | None:intergenic | 45.0% | |
| !! | TTTGGAAGTGTTGGAGGTGT+AGG | + | tig0020912:112993-113012 | Msa1387590:CDS | 45.0% |
| CTGATACCAAGCATGAGCAT+AGG | - | tig0020912:114274-114293 | None:intergenic | 45.0% | |
| CTCATGCTTGGTATCAGCAT+TGG | + | tig0020912:114277-114296 | Msa1387590:CDS | 45.0% | |
| AGGGCTTGAGACATGGAATA+AGG | + | tig0020912:114489-114508 | Msa1387590:CDS | 45.0% | |
| GCCAGGAGACAAGAATCAAA+TGG | + | tig0020912:114694-114713 | Msa1387590:CDS | 45.0% | |
| ATGGCAACATTTGGTCCAGT+TGG | - | tig0020912:114836-114855 | None:intergenic | 45.0% | |
| TTGGGCTACTAGCATTTGTG+TGG | + | tig0020912:115092-115111 | Msa1387590:intron | 45.0% | |
| ATGCAGATCCCAATTGCAGT+TGG | + | tig0020912:115420-115439 | Msa1387590:intron | 45.0% | |
| TGCAGATCCCAATTGCAGTT+GGG | + | tig0020912:115421-115440 | Msa1387590:intron | 45.0% | |
| CAGTTACCCCAACTGCAATT+GGG | - | tig0020912:115431-115450 | None:intergenic | 45.0% | |
| AGGCAACTGCATTGTTCACA+GGG | + | tig0020912:115457-115476 | Msa1387590:CDS | 45.0% | |
| !! | CTATTGTGTGTTTGGTGTGC+TGG | + | tig0020912:115542-115561 | Msa1387590:CDS | 45.0% |
| ! | CAGCAATCCACCGATTATAC+CGG | - | tig0020912:115568-115587 | None:intergenic | 45.0% |
| !! | GGTATAATCGGTGGATTGCT+GGG | + | tig0020912:115567-115586 | Msa1387590:CDS | 45.0% |
| !! | ACTAGGAGGCGGATTTGTTA+TGG | + | tig0020912:115590-115609 | Msa1387590:CDS | 45.0% |
| !! | CTAGGAGGCGGATTTGTTAT+GGG | + | tig0020912:115591-115610 | Msa1387590:CDS | 45.0% |
| !!! | GGTCCACTTTTTCTAGAGCT+AGG | + | tig0020912:115612-115631 | Msa1387590:CDS | 45.0% |
| GAATCGGATGTCTTCTGTGT+AGG | + | tig0020912:115727-115746 | Msa1387590:intron | 45.0% | |
| GGAGAATGTCATTGCGAAAG+TGG | - | tig0020912:115768-115787 | None:intergenic | 45.0% | |
| TTCCACAACAGACATAGACG+AGG | - | tig0020912:115789-115808 | None:intergenic | 45.0% | |
| GCAATCTCATTAGGTGGAGT+TGG | + | tig0020912:116077-116096 | Msa1387590:CDS | 45.0% | |
| TATTCAAAAGCTGCGAACCG+AGG | + | tig0020912:116223-116242 | Msa1387590:three_prime_UTR | 45.0% | |
| TACGGAATCACTCCATCACT+TGG | - | tig0020912:116316-116335 | None:intergenic | 45.0% | |
| ! | AAGTGATGGAGTGATTCCGT+AGG | + | tig0020912:116315-116334 | Msa1387590:three_prime_UTR | 45.0% |
| GATCGGGTTATCAACACGTG+TGG | + | tig0020912:112691-112710 | Msa1387590:CDS | 50.0% | |
| ! | GGATTTTGTGGAGCTGCGTT+TGG | + | tig0020912:112975-112994 | Msa1387590:CDS | 50.0% |
| GTTCTCTTTCGGCCGTTAAG+TGG | - | tig0020912:113257-113276 | None:intergenic | 50.0% | |
| AGGTAGGATGTCTCAGCCTA+AGG | - | tig0020912:114207-114226 | None:intergenic | 50.0% | |
| TAGGCTGAGACATCCTACCT+TGG | + | tig0020912:114207-114226 | Msa1387590:CDS | 50.0% | |
| ! | ATTCATTCTAGGAGGCTGCC+AGG | + | tig0020912:114677-114696 | Msa1387590:intron | 50.0% |
| GTGACACTAATGGTCTCTGG+AGG | + | tig0020912:114949-114968 | Msa1387590:intron | 50.0% | |
| CCTTGGCAATCTGTAGTGCA+AGG | - | tig0020912:115126-115145 | None:intergenic | 50.0% | |
| CCTTGCACTACAGATTGCCA+AGG | + | tig0020912:115123-115142 | Msa1387590:intron | 50.0% | |
| GCAGATCCCAATTGCAGTTG+GGG | + | tig0020912:115422-115441 | Msa1387590:intron | 50.0% | |
| GCAGTTACCCCAACTGCAAT+TGG | - | tig0020912:115432-115451 | None:intergenic | 50.0% | |
| GAGGCAACTGCATTGTTCAC+AGG | + | tig0020912:115456-115475 | Msa1387590:CDS | 50.0% | |
| !! | CGGTATAATCGGTGGATTGC+TGG | + | tig0020912:115566-115585 | Msa1387590:CDS | 50.0% |
| TGTCATTGCGAAAGTGGCTG+TGG | - | tig0020912:115762-115781 | None:intergenic | 50.0% | |
| CTCCTCGTCTATGTCTGTTG+TGG | + | tig0020912:115784-115803 | Msa1387590:CDS | 50.0% | |
| CGGAACGAACCATAAGGAAC+CGG | - | tig0020912:115833-115852 | None:intergenic | 50.0% | |
| CTATCGCGGAACGAACCATA+AGG | - | tig0020912:115839-115858 | None:intergenic | 50.0% | |
| CACAGCTCTTTACTTGAGCC+TGG | + | tig0020912:115944-115963 | Msa1387590:intron | 50.0% | |
| AGCTCTTTACTTGAGCCTGG+TGG | + | tig0020912:115947-115966 | Msa1387590:intron | 50.0% | |
| GCTACTATTGCAGCCTTGGT+TGG | + | tig0020912:115969-115988 | Msa1387590:CDS | 50.0% | |
| ! | ATCACGGCCAACTTAGCTCT+TGG | - | tig0020912:116249-116268 | None:intergenic | 50.0% |
| CTTCACGACGTTGGCGTGAA+GGG | - | tig0020912:112292-112311 | None:intergenic | 55.0% | |
| TCTTCACGACGTTGGCGTGA+AGG | - | tig0020912:112293-112312 | None:intergenic | 55.0% | |
| GGGTTATCAACACGTGTGGC+CGG | + | tig0020912:112695-112714 | Msa1387590:CDS | 55.0% | |
| ! | GGAGCTGCGTTTGGAAGTGT+TGG | + | tig0020912:112984-113003 | Msa1387590:CDS | 55.0% |
| !! | GCTGCGTTTGGAAGTGTTGG+AGG | + | tig0020912:112987-113006 | Msa1387590:CDS | 55.0% |
| !! | GGAAGTGTTGGAGGTGTAGG+TGG | + | tig0020912:112996-113015 | Msa1387590:CDS | 55.0% |
| ! | AGTGTTGGAGGTGTAGGTGG+TGG | + | tig0020912:112999-113018 | Msa1387590:CDS | 55.0% |
| AGTTGGGGTAACTGCGTACG+AGG | + | tig0020912:115437-115456 | Msa1387590:CDS | 55.0% | |
| !! | TGTGTGTTTGGTGTGCTGGC+CGG | + | tig0020912:115546-115565 | Msa1387590:CDS | 55.0% |
| ! | GGTGTGCTGGCCGGTATAAT+CGG | + | tig0020912:115555-115574 | Msa1387590:CDS | 55.0% |
| !! | ATCGGTGGATTGCTGGGACT+AGG | + | tig0020912:115573-115592 | Msa1387590:CDS | 55.0% |
| AGGCTGCAATAGTAGCCACC+AGG | - | tig0020912:115965-115984 | None:intergenic | 55.0% | |
| GGTGGCTACTATTGCAGCCT+TGG | + | tig0020912:115965-115984 | Msa1387590:CDS | 55.0% | |
| ACCGAGGCCAAGAGCTAAGT+TGG | + | tig0020912:116239-116258 | Msa1387590:three_prime_UTR | 55.0% | |
| ! | GCCAACTTAGCTCTTGGCCT+CGG | - | tig0020912:116243-116262 | None:intergenic | 55.0% |
| ! | GTTGGAGGTGTAGGTGGTGG+TGG | + | tig0020912:113002-113021 | Msa1387590:CDS | 60.0% |
| ! | GTGCTGGCCGGTATAATCGG+TGG | + | tig0020912:115558-115577 | Msa1387590:CDS | 60.0% |
| !! | GGTGGATTGCTGGGACTAGG+AGG | + | tig0020912:115576-115595 | Msa1387590:CDS | 60.0% |
| GGATTGCTGGGACTAGGAGG+CGG | + | tig0020912:115579-115598 | Msa1387590:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020912 | gene | 112072 | 116412 | 112072 | ID=Msa1387590;Name=Msa1387590 |
| tig0020912 | mRNA | 112072 | 116412 | 112072 | ID=Msa1387590-mRNA-1;Parent=Msa1387590;Name=Msa1387590-mRNA-1;_AED=0.27;_eAED=0.27;_QI=429|0.9|1|1|0.9|0.81|11|217|442 |
| tig0020912 | exon | 112072 | 112716 | 112072 | ID=Msa1387590-mRNA-1:exon:10667;Parent=Msa1387590-mRNA-1 |
| tig0020912 | exon | 112933 | 113092 | 112933 | ID=Msa1387590-mRNA-1:exon:10668;Parent=Msa1387590-mRNA-1 |
| tig0020912 | exon | 114164 | 114364 | 114164 | ID=Msa1387590-mRNA-1:exon:10669;Parent=Msa1387590-mRNA-1 |
| tig0020912 | exon | 114464 | 114528 | 114464 | ID=Msa1387590-mRNA-1:exon:10670;Parent=Msa1387590-mRNA-1 |
| tig0020912 | exon | 114688 | 114715 | 114688 | ID=Msa1387590-mRNA-1:exon:10671;Parent=Msa1387590-mRNA-1 |
| tig0020912 | exon | 114810 | 114871 | 114810 | ID=Msa1387590-mRNA-1:exon:10672;Parent=Msa1387590-mRNA-1 |
| tig0020912 | exon | 115222 | 115275 | 115222 | ID=Msa1387590-mRNA-1:exon:10673;Parent=Msa1387590-mRNA-1 |
| tig0020912 | exon | 115426 | 115647 | 115426 | ID=Msa1387590-mRNA-1:exon:10674;Parent=Msa1387590-mRNA-1 |
| tig0020912 | exon | 115749 | 115842 | 115749 | ID=Msa1387590-mRNA-1:exon:10675;Parent=Msa1387590-mRNA-1 |
| tig0020912 | exon | 115949 | 116180 | 115949 | ID=Msa1387590-mRNA-1:exon:10676;Parent=Msa1387590-mRNA-1 |
| tig0020912 | exon | 116201 | 116412 | 116201 | ID=Msa1387590-mRNA-1:exon:10677;Parent=Msa1387590-mRNA-1 |
| tig0020912 | five_prime_UTR | 112072 | 112500 | 112072 | ID=Msa1387590-mRNA-1:five_prime_utr;Parent=Msa1387590-mRNA-1 |
| tig0020912 | CDS | 112501 | 112716 | 112501 | ID=Msa1387590-mRNA-1:cds;Parent=Msa1387590-mRNA-1 |
| tig0020912 | CDS | 112933 | 113092 | 112933 | ID=Msa1387590-mRNA-1:cds;Parent=Msa1387590-mRNA-1 |
| tig0020912 | CDS | 114164 | 114364 | 114164 | ID=Msa1387590-mRNA-1:cds;Parent=Msa1387590-mRNA-1 |
| tig0020912 | CDS | 114464 | 114528 | 114464 | ID=Msa1387590-mRNA-1:cds;Parent=Msa1387590-mRNA-1 |
| tig0020912 | CDS | 114688 | 114715 | 114688 | ID=Msa1387590-mRNA-1:cds;Parent=Msa1387590-mRNA-1 |
| tig0020912 | CDS | 114810 | 114871 | 114810 | ID=Msa1387590-mRNA-1:cds;Parent=Msa1387590-mRNA-1 |
| tig0020912 | CDS | 115222 | 115275 | 115222 | ID=Msa1387590-mRNA-1:cds;Parent=Msa1387590-mRNA-1 |
| tig0020912 | CDS | 115426 | 115647 | 115426 | ID=Msa1387590-mRNA-1:cds;Parent=Msa1387590-mRNA-1 |
| tig0020912 | CDS | 115749 | 115842 | 115749 | ID=Msa1387590-mRNA-1:cds;Parent=Msa1387590-mRNA-1 |
| tig0020912 | CDS | 115949 | 116175 | 115949 | ID=Msa1387590-mRNA-1:cds;Parent=Msa1387590-mRNA-1 |
| tig0020912 | three_prime_UTR | 116176 | 116180 | 116176 | ID=Msa1387590-mRNA-1:three_prime_utr;Parent=Msa1387590-mRNA-1 |
| tig0020912 | three_prime_UTR | 116201 | 116412 | 116201 | ID=Msa1387590-mRNA-1:three_prime_utr;Parent=Msa1387590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
