AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1073070


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1073070 MtrunA17_Chr7g0255971 99.296 426 3 0 1 426 1 426 0.0 882
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1073070 AT1G05055.1 75.186 403 95 2 25 426 22 420 0.0 643

Find 165 sgRNAs with CRISPR-Local

Find 324 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGAATTGTTGTTTGCATTT+TGG 0.110115 7_2:+70423519 None:intergenic
TAATTAACTGCTGCATCTTT+TGG 0.192887 7_2:-70426188 Msa1073070:five_prime_UTR
CGCAAAGCATTTACTGCTTA+AGG 0.211646 7_2:+70423239 None:intergenic
CCAAATGGGGCGAAGAAATA+AGG 0.217199 7_2:+70424668 None:intergenic
AATACGTTCCTCCAGTTTCT+TGG 0.246278 7_2:+70425039 None:intergenic
CGCGGAGGCGTCTACGATAC+TGG 0.254751 7_2:+70425973 None:intergenic
AGCAGGTTGAGTTATTTATC+AGG 0.265498 7_2:-70425412 Msa1073070:CDS
TGGCTGATAGTTGAGAAATT+TGG 0.279899 7_2:-70427369 Msa1073070:five_prime_UTR
GGCTGATAGTTGAGAAATTT+GGG 0.316510 7_2:-70427368 Msa1073070:five_prime_UTR
ATGAATGGCTGTCGTATCTA+TGG 0.319191 7_2:+70426001 None:intergenic
GCAATTAGCTACCCCATCTT+TGG 0.320025 7_2:+70425343 None:intergenic
CCTTATTTCTTCGCCCCATT+TGG 0.328190 7_2:-70424668 Msa1073070:CDS
GGATGCAACATCACAATAAC+AGG 0.332868 7_2:+70423343 None:intergenic
ATCTCAGCAAATGGCACTAT+AGG 0.336549 7_2:+70424622 None:intergenic
TGTTGGTCAGTCCCGTTTCA+TGG 0.342585 7_2:+70423291 None:intergenic
GCAAAGCATTTACTGCTTAA+GGG 0.354182 7_2:+70423240 None:intergenic
ATTGCTGGGAGACCACTTAA+TGG 0.357088 7_2:-70426146 Msa1073070:CDS
TTAAGCAGTAAATGCTTTGC+GGG 0.358488 7_2:-70423237 Msa1073070:three_prime_UTR
CAGACACGAACTTTGCATCT+TGG 0.370022 7_2:+70424727 None:intergenic
TTGACAACCAAAACAAGTAT+TGG 0.372545 7_2:+70424561 None:intergenic
TGACAACCAAAACAAGTATT+GGG 0.384714 7_2:+70424562 None:intergenic
TCCACTTAGTCATGTTGGTT+TGG 0.385857 7_2:-70425372 Msa1073070:CDS
AAAGCTTTGATATGTGATTC+AGG 0.388836 7_2:+70425299 None:intergenic
TACGGCTAATTTGATTAAGA+TGG 0.391974 7_2:-70424833 Msa1073070:CDS
TTAGTGGCGGCAAGGGCGAC+GGG 0.395842 7_2:+70427186 None:intergenic
TTAGTGATATTATTTATATG+AGG 0.397548 7_2:-70423204 Msa1073070:three_prime_UTR
GCTAATTGCTTGACAGATCT+TGG 0.398261 7_2:-70425329 Msa1073070:CDS
TCAACAAAGTCTCCTTAGTC+AGG 0.400238 7_2:-70424542 Msa1073070:CDS
TAGATCATGGGAGTCTTTGC+AGG 0.400865 7_2:-70426048 Msa1073070:CDS
TCAACATTCATCACCGTTGA+TGG 0.405020 7_2:-70427389 Msa1073070:five_prime_UTR
TGTCATGAAGAGGCCAAAAC+TGG 0.406378 7_2:-70424766 Msa1073070:CDS
AACAAGTATTGGGAAAACTA+TGG 0.408053 7_2:+70424572 None:intergenic
GAAATCATGAATAACATTGC+TGG 0.411953 7_2:-70426161 Msa1073070:exon
AGCATAGGGCTGAAAATCAT+TGG 0.418688 7_2:+70423409 None:intergenic
GCAGTAAATGCTTTGCGGGC+TGG 0.419918 7_2:-70423233 Msa1073070:three_prime_UTR
GTAGCATACTCTGCTATTGC+TGG 0.426986 7_2:+70424853 None:intergenic
AAGCATCTTTGCCAAGAAAC+TGG 0.430517 7_2:-70425050 Msa1073070:CDS
TTGTTCATGAGTCCGGTAGA+TGG 0.432629 7_2:+70423322 None:intergenic
TCTCAGCAAATGGCACTATA+GGG 0.432960 7_2:+70424623 None:intergenic
CTTAGTGGCGGCAAGGGCGA+CGG 0.433601 7_2:+70427185 None:intergenic
AAGCTCTCTCCCATGCTTCA+AGG 0.434199 7_2:+70426081 None:intergenic
GCAATAACAGCCATTCTACT+TGG 0.435975 7_2:+70425437 None:intergenic
AAATTTGTTCTTTCCATCGT+TGG 0.437314 7_2:-70427294 Msa1073070:five_prime_UTR
AGAAATTTGGGATTGAAAGT+TGG 0.437925 7_2:-70427356 Msa1073070:five_prime_UTR
CCGGACTCATGAACAAGTTC+CGG 0.441793 7_2:-70423315 Msa1073070:three_prime_UTR
AGCTACTGCGCGAATTCAAA+AGG 0.444332 7_2:-70425934 Msa1073070:CDS
TGCCTGAAGCTCTCACAGCC+TGG 0.445795 7_2:+70423453 None:intergenic
GTCAGTCCCGTTTCATGGAC+CGG 0.446240 7_2:+70423296 None:intergenic
AACCCTCAGCTGCTCTCTGC+GGG 0.451697 7_2:+70424806 None:intergenic
ATCACATATCAAAGCTTTGA+TGG 0.453412 7_2:-70425294 Msa1073070:CDS
CAAGTTCCGGTCCATGAAAC+GGG 0.454078 7_2:-70423302 Msa1073070:three_prime_UTR
AAAATAAGATGCTCGGTCAT+TGG 0.454904 7_2:-70425098 Msa1073070:CDS
TTGGGATTGAAAGTTGGTGC+TGG 0.458891 7_2:-70427350 Msa1073070:five_prime_UTR
AGGGCGACGGGGCTCAGCGT+TGG 0.460990 7_2:+70427198 None:intergenic
ACTGTTGCAGCTTCTTCGCT+TGG 0.461264 7_2:-70426212 Msa1073070:intron
CTTAAGCAGTAAATGCTTTG+CGG 0.464779 7_2:-70423238 Msa1073070:three_prime_UTR
ATGATATGACCTTGCCAAAT+GGG 0.468641 7_2:+70424654 None:intergenic
CTTATACAGAAGATAGATCA+TGG 0.469908 7_2:-70426061 Msa1073070:CDS
TCTGCTATTGCTGGAGGTGG+TGG 0.474873 7_2:+70424862 None:intergenic
AATGTTGAGGCGGTGGTTGA+AGG 0.475037 7_2:+70427404 None:intergenic
CAGAATCCACTTAGTCATGT+TGG 0.477460 7_2:-70425377 Msa1073070:CDS
AATTTAATGTCGAGAGCATA+GGG 0.480867 7_2:+70423395 None:intergenic
CAAGAATTAACTCTTTAAAG+TGG 0.481614 7_2:+70424893 None:intergenic
AAATTGCAAGGGAGACATGC+TGG 0.484045 7_2:+70423059 None:intergenic
GTGCTGCTCTTCATCTTCGT+CGG 0.484543 7_2:+70427466 None:intergenic
CTAAATCAAATCCCATCATA+TGG 0.484909 7_2:-70425209 Msa1073070:CDS
CAAATGGGGCGAAGAAATAA+GGG 0.486869 7_2:+70424669 None:intergenic
CAGTAGCTGCATTGGAAGCA+AGG 0.488868 7_2:+70425949 None:intergenic
AATGGCTGTTATTGCAAAGC+AGG 0.492810 7_2:-70425429 Msa1073070:CDS
ACTTCTCGATGACCATATGA+TGG 0.494544 7_2:+70425197 None:intergenic
TAGTGATATTATTTATATGA+GGG 0.495841 7_2:-70423203 Msa1073070:three_prime_UTR
ACGGCTAATTTGATTAAGAT+GGG 0.497450 7_2:-70424832 Msa1073070:CDS
AATTCGCGCAGTAGCTGCAT+TGG 0.498951 7_2:+70425941 None:intergenic
TCTTTGCAGGAAGATGAATC+TGG 0.499907 7_2:-70426035 Msa1073070:CDS
CGGTGATCGGAGAAGCTTAG+TGG 0.501668 7_2:+70427170 None:intergenic
ACAAGTTCCGGTCCATGAAA+CGG 0.503143 7_2:-70423303 Msa1073070:three_prime_UTR
TCTTCTAAATCTCCATTAAG+TGG 0.504303 7_2:+70426134 None:intergenic
CCGGAACTTGTTCATGAGTC+CGG 0.506310 7_2:+70423315 None:intergenic
ATTAATCCAACGTTGTACAT+AGG 0.509643 7_2:-70427271 Msa1073070:five_prime_UTR
TACTCTGCTATTGCTGGAGG+TGG 0.509837 7_2:+70424859 None:intergenic
TGATGACGGCCTTGAAGCAT+GGG 0.514779 7_2:-70426090 Msa1073070:CDS
GCCCTCAGTACATGTGATCC+TGG 0.517560 7_2:-70425158 Msa1073070:CDS
GCATAGGGCTGAAAATCATT+GGG 0.517731 7_2:+70423410 None:intergenic
AAGAATTAACTCTTTAAAGT+GGG 0.519422 7_2:+70424894 None:intergenic
TTTCCCGCAGAGAGCAGCTG+AGG 0.522724 7_2:-70424809 Msa1073070:CDS
ATGTGATCCTGGTGATCTCA+TGG 0.524391 7_2:-70425147 Msa1073070:CDS
TGGGATTGAAAGTTGGTGCT+GGG 0.524854 7_2:-70427349 Msa1073070:five_prime_UTR
CAATTTAATGTCGAGAGCAT+AGG 0.527004 7_2:+70423394 None:intergenic
TTCCAGGAAAGAACAAAAGA+AGG 0.527754 7_2:+70423129 None:intergenic
GATGGAGAGATCTCAGCAAA+TGG 0.528431 7_2:+70424613 None:intergenic
GCAGATGCTTACCCTGACTA+AGG 0.531723 7_2:+70424530 None:intergenic
ATGATGACGGCCTTGAAGCA+TGG 0.531905 7_2:-70426091 Msa1073070:CDS
GTTTGGTGACTACCAAAGAT+GGG 0.532066 7_2:-70425355 Msa1073070:CDS
TTCGTCGGAGTGAGTTTCGA+TGG 0.532800 7_2:+70427481 None:intergenic
CTGCATTGGAAGCAAGGGCG+CGG 0.534684 7_2:+70425955 None:intergenic
ACGATACTGGGCATGATGAA+TGG 0.537849 7_2:+70425986 None:intergenic
AAATCATGAATAACATTGCT+GGG 0.538852 7_2:-70426160 Msa1073070:exon
ACGATACTTATACATTGTTG+TGG 0.540981 7_2:-70425904 Msa1073070:CDS
GTGATGTTGCATCCATCTAC+CGG 0.542199 7_2:-70423334 Msa1073070:three_prime_UTR
GAGAAGCTTAGTGGCGGCAA+GGG 0.543362 7_2:+70427179 None:intergenic
CAGCAGTGCATGGACAATCT+CGG 0.543605 7_2:+70427241 None:intergenic
GGTTTGGTGACTACCAAAGA+TGG 0.543660 7_2:-70425356 Msa1073070:CDS
ACCAAACCAACATGACTAAG+TGG 0.545386 7_2:+70425371 None:intergenic
GTTGAGGCGGTGGTTGAAGG+AGG 0.546105 7_2:+70427407 None:intergenic
GTATTGGGAAAACTATGGCT+TGG 0.546635 7_2:+70424577 None:intergenic
GCAGGTTGAGTTATTTATCA+GGG 0.547101 7_2:-70425411 Msa1073070:CDS
ATGGGTAAACTAGAATGCTC+AGG 0.550740 7_2:-70425275 Msa1073070:CDS
GCGGAGGCGTCTACGATACT+GGG 0.551267 7_2:+70425974 None:intergenic
AAATACTTTGCTGGCAACAA+CGG 0.551591 7_2:+70423012 None:intergenic
GAATGTACATGTCACAATCA+AGG 0.551889 7_2:+70423496 None:intergenic
GATGATATGACCTTGCCAAA+TGG 0.554390 7_2:+70424653 None:intergenic
AAAGAGTAAAATAAGATGCT+CGG 0.555283 7_2:-70425105 Msa1073070:CDS
GGACTTTCGACCAAGTAGAA+TGG 0.557663 7_2:-70425447 Msa1073070:CDS
TTTCTTCGCCCCATTTGGCA+AGG 0.558902 7_2:-70424663 Msa1073070:CDS
ACATTAAATTGCTATCTAAG+TGG 0.563697 7_2:-70423382 Msa1073070:three_prime_UTR
GGAGAAGCTTAGTGGCGGCA+AGG 0.566664 7_2:+70427178 None:intergenic
GCTACTGCGCGAATTCAAAA+GGG 0.568436 7_2:-70425933 Msa1073070:CDS
AGTAGCTGCATTGGAAGCAA+GGG 0.572059 7_2:+70425950 None:intergenic
AGCCATACCTCAACGGTGAT+CGG 0.577511 7_2:+70427157 None:intergenic
TCACATATCAAAGCTTTGAT+GGG 0.580406 7_2:-70425293 Msa1073070:CDS
GAAGAGGCCAAAACTGGAGG+GGG 0.581044 7_2:-70424760 Msa1073070:CDS
ATAAAACCAATACCTTGGAC+AGG 0.584168 7_2:+70425880 None:intergenic
ATGAAGAGGCCAAAACTGGA+GGG 0.588329 7_2:-70424762 Msa1073070:CDS
ATAGTTTCCATGAGATCACC+AGG 0.588426 7_2:+70425140 None:intergenic
CATTGGAAGCAAGGGCGCGG+AGG 0.590208 7_2:+70425958 None:intergenic
TTCCCGCAGAGAGCAGCTGA+GGG 0.592191 7_2:-70424808 Msa1073070:CDS
TTCGCGCCTATGTACAACGT+TGG 0.594743 7_2:+70427265 None:intergenic
ACACAGTTCACAGCAGTGCA+TGG 0.595333 7_2:+70427231 None:intergenic
CATTGTTGTGGACCTGTCCA+AGG 0.596446 7_2:-70425892 Msa1073070:intron
CATGAAGAGGCCAAAACTGG+AGG 0.598041 7_2:-70424763 Msa1073070:CDS
CCACAGACGCGGCATTCAGT+AGG 0.598667 7_2:+70424697 None:intergenic
GGTGATGAATGTTGAGGCGG+TGG 0.600351 7_2:+70427397 None:intergenic
CTTCTCGATGACCATATGAT+GGG 0.601649 7_2:+70425198 None:intergenic
GAGAGCTTACATAATTGCCC+AGG 0.603317 7_2:-70423471 Msa1073070:CDS
ACCAGGATCACATGTACTGA+GGG 0.609658 7_2:+70425157 None:intergenic
AATTTGTACATGTCATGAAG+AGG 0.609944 7_2:-70424776 Msa1073070:CDS
ATCAGGTGATCAGATGGTGT+TGG 0.610013 7_2:+70423274 None:intergenic
TGAAGAGGCCAAAACTGGAG+GGG 0.611129 7_2:-70424761 Msa1073070:CDS
AGCAATAGCAGAGTATGCTA+CGG 0.612493 7_2:-70424851 Msa1073070:CDS
CAACAAAGTCTCCTTAGTCA+GGG 0.617485 7_2:-70424541 Msa1073070:intron
TAGTGGCGGCAAGGGCGACG+GGG 0.619705 7_2:+70427187 None:intergenic
AATTGCTTGACAGATCTTGG+TGG 0.623485 7_2:-70425326 Msa1073070:CDS
AGCTTCTCCGATCACCGTTG+AGG 0.627309 7_2:-70427164 Msa1073070:intron
ATGACATGTACAAATTGCAA+CGG 0.627725 7_2:+70424783 None:intergenic
GAACCCTCAGCTGCTCTCTG+CGG 0.628015 7_2:+70424805 None:intergenic
GCATACTCTGCTATTGCTGG+AGG 0.629853 7_2:+70424856 None:intergenic
TGTGAAGGCAGCTTCAGAGA+GGG 0.635359 7_2:-70425468 Msa1073070:intron
TTATACAGAAGATAGATCAT+GGG 0.648110 7_2:-70426060 Msa1073070:CDS
GTATTCAGTTGCACTAGATG+AGG 0.654736 7_2:-70425021 Msa1073070:intron
TGATATGACCTTGCCAAATG+GGG 0.658745 7_2:+70424655 None:intergenic
TCTCAACTATCAGCCATCAA+CGG 0.659357 7_2:+70427376 None:intergenic
TGTTGACAGCCATACCTCAA+CGG 0.662860 7_2:+70427150 None:intergenic
GAAGATGAAGCTAATGATGA+CGG 0.672146 7_2:-70426104 Msa1073070:CDS
ATCAACGGTGATGAATGTTG+AGG 0.675785 7_2:+70427391 None:intergenic
TGAATGGCTGTCGTATCTAT+GGG 0.676923 7_2:+70426002 None:intergenic
CACCAGGATCACATGTACTG+AGG 0.677082 7_2:+70425156 None:intergenic
TTTGGTGACTACCAAAGATG+GGG 0.677542 7_2:-70425354 Msa1073070:CDS
ACGTTGGATTAATCCAACGA+TGG 0.680648 7_2:+70427281 None:intergenic
CATCTTTGCCAAGAAACTGG+AGG 0.685674 7_2:-70425047 Msa1073070:CDS
AACGGTGATGAATGTTGAGG+CGG 0.697191 7_2:+70427394 None:intergenic
ATGTGAAGGCAGCTTCAGAG+AGG 0.697264 7_2:-70425469 Msa1073070:intron
TGATCGGAGAAGCTTAGTGG+CGG 0.705543 7_2:+70427173 None:intergenic
TAAGGGTCAATCCACAGACG+CGG 0.726359 7_2:+70424686 None:intergenic
GATGCAACATCACAATAACA+GGG 0.762256 7_2:+70423344 None:intergenic
GCAACATCACAATAACAGGG+AGG 0.778977 7_2:+70423347 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAATAATTAAAAATGAG+AGG + chr7_2:70423177-70423196 None:intergenic 10.0%
!! GTAATATAAAAATAACAAAT+AGG - chr7_2:70426106-70426125 Msa1073070:CDS 10.0%
!! AAATACAAATTATATATCAT+CGG + chr7_2:70426819-70426838 None:intergenic 10.0%
!!! AAAAAGAAAATAATTTGTTA+TGG + chr7_2:70427340-70427359 None:intergenic 10.0%
!! TTATTGAAATACATAAATTG+TGG - chr7_2:70426174-70426193 Msa1073070:exon 15.0%
!! ATCTAATGAATAAAAAAATC+TGG + chr7_2:70426228-70426247 None:intergenic 15.0%
!! ATATACTATATAGTATAGTT+GGG + chr7_2:70426739-70426758 None:intergenic 15.0%
!! TTAGTGATATTATTTATATG+AGG - chr7_2:70427285-70427304 Msa1073070:five_prime_UTR 15.0%
!! TAGTGATATTATTTATATGA+GGG - chr7_2:70427286-70427305 Msa1073070:five_prime_UTR 15.0%
!! ATTGATTAAAAAAATTGCAA+GGG + chr7_2:70427444-70427463 None:intergenic 15.0%
!!! TTGCAATTTTTTTAATCAAT+GGG - chr7_2:70427444-70427463 Msa1073070:five_prime_UTR 15.0%
!! AACATAATACAATCAGTTTA+GGG + chr7_2:70423384-70423403 None:intergenic 20.0%
!! TATTCTAATATGCATAATCT+AGG - chr7_2:70423445-70423464 Msa1073070:CDS 20.0%
!! TATTTATGCATAGGAAATTA+CGG + chr7_2:70423984-70424003 None:intergenic 20.0%
!! TTCATGATCTTATTATTTCA+CGG - chr7_2:70424072-70424091 Msa1073070:intron 20.0%
!! AATTAATAAAACCAATACCT+TGG + chr7_2:70424617-70424636 None:intergenic 20.0%
!!! TTTTCAAGTAATCAATACAA+TGG + chr7_2:70424679-70424698 None:intergenic 20.0%
!!! TGTATTGATTACTTGAAAAT+TGG - chr7_2:70424680-70424699 Msa1073070:CDS 20.0%
!!! GTATTGATTACTTGAAAATT+GGG - chr7_2:70424681-70424700 Msa1073070:CDS 20.0%
!!! TATTGATTACTTGAAAATTG+GGG - chr7_2:70424682-70424701 Msa1073070:CDS 20.0%
!!! ATTCAAAAAGCATTTGTAAA+AGG + chr7_2:70424769-70424788 None:intergenic 20.0%
!! GCAATTTCATATATAATTAC+AGG + chr7_2:70424893-70424912 None:intergenic 20.0%
!! AATAAGATACTTGTAATTGT+AGG + chr7_2:70424923-70424942 None:intergenic 20.0%
!!! AGAAGTTCTGATTTTATATT+CGG - chr7_2:70425309-70425328 Msa1073070:CDS 20.0%
!!! TTTTACTCTTTTTGCATTTT+TGG + chr7_2:70425375-70425394 None:intergenic 20.0%
!!! AAGAATTAACTCTTTAAAGT+GGG + chr7_2:70425598-70425617 None:intergenic 20.0%
!!! CAAAAATTATTGACTATTAC+AGG + chr7_2:70426454-70426473 None:intergenic 20.0%
!! CATATACTATATAGTATAGT+TGG + chr7_2:70426740-70426759 None:intergenic 20.0%
!!! CATTGATTAAAAAAATTGCA+AGG + chr7_2:70427445-70427464 None:intergenic 20.0%
!!! CTTGCAATTTTTTTAATCAA+TGG - chr7_2:70427443-70427462 Msa1073070:five_prime_UTR 20.0%
!! TGATTATAAAAATACTTTGC+TGG + chr7_2:70427489-70427508 None:intergenic 20.0%
! ACATAATACAATCAGTTTAG+GGG + chr7_2:70423383-70423402 None:intergenic 25.0%
! GAACATAATACAATCAGTTT+AGG + chr7_2:70423385-70423404 None:intergenic 25.0%
!!! TAGATCAAAAGTGTTTTCTT+TGG - chr7_2:70423629-70423648 Msa1073070:intron 25.0%
! TTAGGTTCAGAAGAATTTAA+GGG - chr7_2:70423656-70423675 Msa1073070:intron 25.0%
! GGATATATATTCATAGGTTT+CGG - chr7_2:70423682-70423701 Msa1073070:intron 25.0%
! ATTTGCAGAGTGAAAAATAA+AGG + chr7_2:70423904-70423923 None:intergenic 25.0%
! ATTTATGCATAGGAAATTAC+GGG + chr7_2:70423983-70424002 None:intergenic 25.0%
! TGAGGTTATTATTTATGCAT+AGG + chr7_2:70423993-70424012 None:intergenic 25.0%
! GTGAAATTAAAAAGAAAACG+AGG + chr7_2:70424023-70424042 None:intergenic 25.0%
! GAATAATTCACACACATAAA+GGG + chr7_2:70424162-70424181 None:intergenic 25.0%
! TGAATAATTCACACACATAA+AGG + chr7_2:70424163-70424182 None:intergenic 25.0%
! AAATCATGAATAACATTGCT+GGG - chr7_2:70424329-70424348 Msa1073070:intron 25.0%
! TTATACAGAAGATAGATCAT+GGG - chr7_2:70424429-70424448 Msa1073070:intron 25.0%
! AGGAAATATAGATAAGACAT+TGG + chr7_2:70424749-70424768 None:intergenic 25.0%
! AAGTATAGATGTACTTCTAA+AGG + chr7_2:70424803-70424822 None:intergenic 25.0%
! TAGAAACTAGTTATGTTACA+AGG + chr7_2:70424995-70425014 None:intergenic 25.0%
! AAAGAGTAAAATAAGATGCT+CGG - chr7_2:70425384-70425403 Msa1073070:CDS 25.0%
!! CAAGAATTAACTCTTTAAAG+TGG + chr7_2:70425599-70425618 None:intergenic 25.0%
! TACATTTGACATAGCATATT+AGG + chr7_2:70426060-70426079 None:intergenic 25.0%
! TAATTTCATAAATTCTTCCC+AGG - chr7_2:70426133-70426152 Msa1073070:CDS 25.0%
! AATTTCATAAATTCTTCCCA+GGG - chr7_2:70426134-70426153 Msa1073070:CDS 25.0%
!! AATAGTCAATAATTTTTGCG+AGG - chr7_2:70426456-70426475 Msa1073070:intron 25.0%
!!! TTTTTTCTCATCCATATTTG+GGG + chr7_2:70426565-70426584 None:intergenic 25.0%
!!! CTTTTTTCTCATCCATATTT+GGG + chr7_2:70426566-70426585 None:intergenic 25.0%
!!! ACTTTTTTCTCATCCATATT+TGG + chr7_2:70426567-70426586 None:intergenic 25.0%
!!! AGAATTGTTGTTTGCATTTT+GGG + chr7_2:70426972-70426991 None:intergenic 25.0%
! ACATTAAATTGCTATCTAAG+TGG - chr7_2:70427107-70427126 Msa1073070:intron 25.0%
!!! TTACATGTGTTTTAATTTCC+AGG + chr7_2:70427379-70427398 None:intergenic 25.0%
!! GTTGTTTTGTCAAGTTTTGA+TGG + chr7_2:70423057-70423076 None:intergenic 30.0%
! AGAAATTTGGGATTGAAAGT+TGG - chr7_2:70423133-70423152 Msa1073070:three_prime_UTR 30.0%
! AAATTTGTTCTTTCCATCGT+TGG - chr7_2:70423195-70423214 Msa1073070:three_prime_UTR 30.0%
ATTAATCCAACGTTGTACAT+AGG - chr7_2:70423218-70423237 Msa1073070:three_prime_UTR 30.0%
ACCATGTAAATAGCGAAAAA+GGG - chr7_2:70423414-70423433 Msa1073070:exon 30.0%
AATCCAATCCAAAACGAAAA+GGG + chr7_2:70423474-70423493 None:intergenic 30.0%
AAATCCAATCCAAAACGAAA+AGG + chr7_2:70423475-70423494 None:intergenic 30.0%
TTAGTGTACAAAGCGAAATA+GGG + chr7_2:70423522-70423541 None:intergenic 30.0%
TTTAGTGTACAAAGCGAAAT+AGG + chr7_2:70423523-70423542 None:intergenic 30.0%
AATGAATGACTCTCACATTA+AGG + chr7_2:70423562-70423581 None:intergenic 30.0%
!! AGTGTTTTCTTTGGTTAGTT+AGG - chr7_2:70423638-70423657 Msa1073070:intron 30.0%
GTTAGGTTCAGAAGAATTTA+AGG - chr7_2:70423655-70423674 Msa1073070:intron 30.0%
TGTTGTTACTAGTTGTTTGT+TGG - chr7_2:70423717-70423736 Msa1073070:intron 30.0%
AACACAACTCAATCATAGAA+CGG + chr7_2:70424126-70424145 None:intergenic 30.0%
GAAACATCAGCACTTAAAAA+GGG + chr7_2:70424209-70424228 None:intergenic 30.0%
AGAAACATCAGCACTTAAAA+AGG + chr7_2:70424210-70424229 None:intergenic 30.0%
! TAATTAACTGCTGCATCTTT+TGG - chr7_2:70424301-70424320 Msa1073070:intron 30.0%
! AATTAACTGCTGCATCTTTT+GGG - chr7_2:70424302-70424321 Msa1073070:intron 30.0%
GAAATCATGAATAACATTGC+TGG - chr7_2:70424328-70424347 Msa1073070:intron 30.0%
TCTTCTAAATCTCCATTAAG+TGG + chr7_2:70424358-70424377 None:intergenic 30.0%
CTTATACAGAAGATAGATCA+TGG - chr7_2:70424428-70424447 Msa1073070:intron 30.0%
ACGATACTTATACATTGTTG+TGG - chr7_2:70424585-70424604 Msa1073070:CDS 30.0%
TAGTTTCTAACATCATGTGA+AGG - chr7_2:70425006-70425025 Msa1073070:intron 30.0%
! AAAGCTTTGATATGTGATTC+AGG + chr7_2:70425193-70425212 None:intergenic 30.0%
! ATCACATATCAAAGCTTTGA+TGG - chr7_2:70425195-70425214 Msa1073070:CDS 30.0%
! TCACATATCAAAGCTTTGAT+GGG - chr7_2:70425196-70425215 Msa1073070:CDS 30.0%
!! AAGTTCTAGTGCATTTTGTA+GGG + chr7_2:70425248-70425267 None:intergenic 30.0%
CTAAATCAAATCCCATCATA+TGG - chr7_2:70425280-70425299 Msa1073070:CDS 30.0%
AAAAATGCTGACACATTCTA+AGG + chr7_2:70425532-70425551 None:intergenic 30.0%
TACGGCTAATTTGATTAAGA+TGG - chr7_2:70425656-70425675 Msa1073070:intron 30.0%
ACGGCTAATTTGATTAAGAT+GGG - chr7_2:70425657-70425676 Msa1073070:intron 30.0%
ATGACATGTACAAATTGCAA+CGG + chr7_2:70425709-70425728 None:intergenic 30.0%
AATTTGTACATGTCATGAAG+AGG - chr7_2:70425713-70425732 Msa1073070:intron 30.0%
!! AACAAGTATTGGGAAAACTA+TGG + chr7_2:70425920-70425939 None:intergenic 30.0%
! AGTTTTCCCAATACTTGTTT+TGG - chr7_2:70425921-70425940 Msa1073070:CDS 30.0%
TGACAACCAAAACAAGTATT+GGG + chr7_2:70425930-70425949 None:intergenic 30.0%
TTGACAACCAAAACAAGTAT+TGG + chr7_2:70425931-70425950 None:intergenic 30.0%
ATCTTCAAGAATAAATCCCT+GGG + chr7_2:70426153-70426172 None:intergenic 30.0%
AATCTTCAAGAATAAATCCC+TGG + chr7_2:70426154-70426173 None:intergenic 30.0%
ATGACCTAACCATTGTAAAA+GGG - chr7_2:70426259-70426278 Msa1073070:intron 30.0%
! TAATCCCTTTTACAATGGTT+AGG + chr7_2:70426266-70426285 None:intergenic 30.0%
AGTATGAAAGCTATGTTTGA+TGG - chr7_2:70426521-70426540 Msa1073070:intron 30.0%
TATGGATGAGAAAAAAGTCA+TGG - chr7_2:70426569-70426588 Msa1073070:intron 30.0%
!! TCATGGTTTGTTAAAGTAAC+AGG - chr7_2:70426586-70426605 Msa1073070:intron 30.0%
AGACACAGTACTCAATTATT+TGG + chr7_2:70426670-70426689 None:intergenic 30.0%
!!! CAGAATTGTTGTTTGCATTT+TGG + chr7_2:70426973-70426992 None:intergenic 30.0%
! AATTTAATGTCGAGAGCATA+GGG + chr7_2:70427097-70427116 None:intergenic 30.0%
!! TTGTCAAGTTTTGATGGATG+TGG + chr7_2:70423051-70423070 None:intergenic 35.0%
TGGCTGATAGTTGAGAAATT+TGG - chr7_2:70423120-70423139 Msa1073070:three_prime_UTR 35.0%
GGCTGATAGTTGAGAAATTT+GGG - chr7_2:70423121-70423140 Msa1073070:three_prime_UTR 35.0%
ATACAATCAGTTTAGGGGAT+TGG + chr7_2:70423378-70423397 None:intergenic 35.0%
CACCATGTAAATAGCGAAAA+AGG - chr7_2:70423413-70423432 Msa1073070:exon 35.0%
!! ACCCTTTTTCGCTATTTACA+TGG + chr7_2:70423418-70423437 None:intergenic 35.0%
!! TAACCCTTTTCGTTTTGGAT+TGG - chr7_2:70423468-70423487 Msa1073070:CDS 35.0%
TGCAGAGTGAAAAACAAAGA+AGG + chr7_2:70423591-70423610 None:intergenic 35.0%
TTCAGAAGAATTTAAGGGTG+AGG - chr7_2:70423661-70423680 Msa1073070:intron 35.0%
GGGTGAGGATATATATTCAT+AGG - chr7_2:70423676-70423695 Msa1073070:intron 35.0%
ATTACTGAATGCCAACACTA+TGG - chr7_2:70424182-70424201 Msa1073070:intron 35.0%
TTAAAAAGGGACCATAGTGT+TGG + chr7_2:70424196-70424215 None:intergenic 35.0%
GAAGATGAAGCTAATGATGA+CGG - chr7_2:70424385-70424404 Msa1073070:intron 35.0%
ATAAAACCAATACCTTGGAC+AGG + chr7_2:70424612-70424631 None:intergenic 35.0%
GAAAATTGGGGTTCAATTAG+AGG - chr7_2:70424694-70424713 Msa1073070:CDS 35.0%
! TAGTCGCACTAATTTTCATG+TGG - chr7_2:70424854-70424873 Msa1073070:CDS 35.0%
! AGCAGGTTGAGTTATTTATC+AGG - chr7_2:70425077-70425096 Msa1073070:CDS 35.0%
! GCAGGTTGAGTTATTTATCA+GGG - chr7_2:70425078-70425097 Msa1073070:CDS 35.0%
!! CAAGTTCTAGTGCATTTTGT+AGG + chr7_2:70425249-70425268 None:intergenic 35.0%
AAAATAAGATGCTCGGTCAT+TGG - chr7_2:70425391-70425410 Msa1073070:CDS 35.0%
ATGATATGACCTTGCCAAAT+GGG + chr7_2:70425838-70425857 None:intergenic 35.0%
!!! CTTGGATCATTTTGAGATGA+TGG + chr7_2:70425897-70425916 None:intergenic 35.0%
AGACTCATGATACTGCTTAA+AGG - chr7_2:70426079-70426098 Msa1073070:CDS 35.0%
GACTCATGATACTGCTTAAA+GGG - chr7_2:70426080-70426099 Msa1073070:CDS 35.0%
CATGACCTAACCATTGTAAA+AGG - chr7_2:70426258-70426277 Msa1073070:intron 35.0%
! GTTGCTAATCCCTTTTACAA+TGG + chr7_2:70426271-70426290 None:intergenic 35.0%
CTCAATGCTAGTATCTTACA+AGG - chr7_2:70426396-70426415 Msa1073070:intron 35.0%
! TATTGACTATTACAGGCTCA+CGG + chr7_2:70426447-70426466 None:intergenic 35.0%
!! TGGTTTGTTAAAGTAACAGG+TGG - chr7_2:70426589-70426608 Msa1073070:intron 35.0%
AACCTGTAAAAGCAGTGTTT+GGG + chr7_2:70426912-70426931 None:intergenic 35.0%
AAACCTGTAAAAGCAGTGTT+TGG + chr7_2:70426913-70426932 None:intergenic 35.0%
!! AACACTGCTTTTACAGGTTT+TGG - chr7_2:70426913-70426932 Msa1073070:intron 35.0%
GAATGTACATGTCACAATCA+AGG + chr7_2:70426996-70427015 None:intergenic 35.0%
! CAATTTAATGTCGAGAGCAT+AGG + chr7_2:70427098-70427117 None:intergenic 35.0%
GATGCAACATCACAATAACA+GGG + chr7_2:70427148-70427167 None:intergenic 35.0%
!! ATTTTGATCAGGTGATCAGA+TGG + chr7_2:70427224-70427243 None:intergenic 35.0%
! GCAAAGCATTTACTGCTTAA+GGG + chr7_2:70427252-70427271 None:intergenic 35.0%
CTTAAGCAGTAAATGCTTTG+CGG - chr7_2:70427251-70427270 Msa1073070:five_prime_UTR 35.0%
TTAAGCAGTAAATGCTTTGC+GGG - chr7_2:70427252-70427271 Msa1073070:five_prime_UTR 35.0%
! TTCCTTCTTTTGTTCTTTCC+TGG - chr7_2:70427358-70427377 Msa1073070:five_prime_UTR 35.0%
TTCCAGGAAAGAACAAAAGA+AGG + chr7_2:70427363-70427382 None:intergenic 35.0%
AAATACTTTGCTGGCAACAA+CGG + chr7_2:70427480-70427499 None:intergenic 35.0%
ATCAACGGTGATGAATGTTG+AGG + chr7_2:70423101-70423120 None:intergenic 40.0%
TCAACATTCATCACCGTTGA+TGG - chr7_2:70423100-70423119 Msa1073070:three_prime_UTR 40.0%
TCTCAACTATCAGCCATCAA+CGG + chr7_2:70423116-70423135 None:intergenic 40.0%
ACGTTGGATTAATCCAACGA+TGG + chr7_2:70423211-70423230 None:intergenic 40.0%
TCAGTTTAGGGGATTGGATT+TGG + chr7_2:70423372-70423391 None:intergenic 40.0%
! CTAGGTAACCCTTTTCGTTT+TGG - chr7_2:70423463-70423482 Msa1073070:CDS 40.0%
! AGTTGTTTGTTGGAACATGC+TGG - chr7_2:70423727-70423746 Msa1073070:intron 40.0%
! GTTGTTTGTTGGAACATGCT+GGG - chr7_2:70423728-70423747 Msa1073070:intron 40.0%
AGTTGCATTGCAATGTCTGA+GGG - chr7_2:70423781-70423800 Msa1073070:intron 40.0%
AGAAAACGAGGTTCAAAGTG+AGG + chr7_2:70424011-70424030 None:intergenic 40.0%
TCTTTGCAGGAAGATGAATC+TGG - chr7_2:70424454-70424473 Msa1073070:intron 40.0%
TGAATGGCTGTCGTATCTAT+GGG + chr7_2:70424490-70424509 None:intergenic 40.0%
ATGAATGGCTGTCGTATCTA+TGG + chr7_2:70424491-70424510 None:intergenic 40.0%
ATTGGGGTTCAATTAGAGGT+TGG - chr7_2:70424698-70424717 Msa1073070:CDS 40.0%
TTGGGGTTCAATTAGAGGTT+GGG - chr7_2:70424699-70424718 Msa1073070:CDS 40.0%
CAATTAGAGGTTGGGTATGT+TGG - chr7_2:70424707-70424726 Msa1073070:CDS 40.0%
GCAATAACAGCCATTCTACT+TGG + chr7_2:70425055-70425074 None:intergenic 40.0%
AATGGCTGTTATTGCAAAGC+AGG - chr7_2:70425060-70425079 Msa1073070:CDS 40.0%
CAGAATCCACTTAGTCATGT+TGG - chr7_2:70425112-70425131 Msa1073070:CDS 40.0%
! TCCACTTAGTCATGTTGGTT+TGG - chr7_2:70425117-70425136 Msa1073070:CDS 40.0%
ACCAAACCAACATGACTAAG+TGG + chr7_2:70425121-70425140 None:intergenic 40.0%
! GTTTGGTGACTACCAAAGAT+GGG - chr7_2:70425134-70425153 Msa1073070:CDS 40.0%
! TTTGGTGACTACCAAAGATG+GGG - chr7_2:70425135-70425154 Msa1073070:CDS 40.0%
GCTAATTGCTTGACAGATCT+TGG - chr7_2:70425160-70425179 Msa1073070:CDS 40.0%
AATTGCTTGACAGATCTTGG+TGG - chr7_2:70425163-70425182 Msa1073070:CDS 40.0%
ATGGGTAAACTAGAATGCTC+AGG - chr7_2:70425214-70425233 Msa1073070:CDS 40.0%
! TTCTAGTGCATTTTGTAGGG+AGG + chr7_2:70425245-70425264 None:intergenic 40.0%
CTTCTCGATGACCATATGAT+GGG + chr7_2:70425294-70425313 None:intergenic 40.0%
ACTTCTCGATGACCATATGA+TGG + chr7_2:70425295-70425314 None:intergenic 40.0%
ATAGTTTCCATGAGATCACC+AGG + chr7_2:70425352-70425371 None:intergenic 40.0%
AAGCATCTTTGCCAAGAAAC+TGG - chr7_2:70425439-70425458 Msa1073070:CDS 40.0%
AATACGTTCCTCCAGTTTCT+TGG + chr7_2:70425453-70425472 None:intergenic 40.0%
GTATTCAGTTGCACTAGATG+AGG - chr7_2:70425468-70425487 Msa1073070:intron 40.0%
AGCAATAGCAGAGTATGCTA+CGG - chr7_2:70425638-70425657 Msa1073070:intron 40.0%
CAAATGGGGCGAAGAAATAA+GGG + chr7_2:70425823-70425842 None:intergenic 40.0%
TGATATGACCTTGCCAAATG+GGG + chr7_2:70425837-70425856 None:intergenic 40.0%
GATGATATGACCTTGCCAAA+TGG + chr7_2:70425839-70425858 None:intergenic 40.0%
TCTCAGCAAATGGCACTATA+GGG + chr7_2:70425869-70425888 None:intergenic 40.0%
ATCTCAGCAAATGGCACTAT+AGG + chr7_2:70425870-70425889 None:intergenic 40.0%
GTATTGGGAAAACTATGGCT+TGG + chr7_2:70425915-70425934 None:intergenic 40.0%
TCAACAAAGTCTCCTTAGTC+AGG - chr7_2:70425947-70425966 Msa1073070:CDS 40.0%
CAACAAAGTCTCCTTAGTCA+GGG - chr7_2:70425948-70425967 Msa1073070:CDS 40.0%
AAGGTGGTTAACAGGGAATA+AGG + chr7_2:70426297-70426316 None:intergenic 40.0%
AACTCACAAGGTGGTTAACA+GGG + chr7_2:70426304-70426323 None:intergenic 40.0%
AACTAGAGCTACAACTCACA+AGG + chr7_2:70426316-70426335 None:intergenic 40.0%
GCATTGAGACACTTTAGCAT+GGG + chr7_2:70426384-70426403 None:intergenic 40.0%
! AGCATTGAGACACTTTAGCA+TGG + chr7_2:70426385-70426404 None:intergenic 40.0%
TTGCGAGGCATAAAAGTCTT+AGG - chr7_2:70426471-70426490 Msa1073070:intron 40.0%
ACACAGTTGTACCCCAAATA+TGG - chr7_2:70426551-70426570 Msa1073070:intron 40.0%
TACTGTATATTCTCAGCAGC+GGG + chr7_2:70426793-70426812 None:intergenic 40.0%
CTACTGTATATTCTCAGCAG+CGG + chr7_2:70426794-70426813 None:intergenic 40.0%
!! TTCCCAAACACTGCTTTTAC+AGG - chr7_2:70426907-70426926 Msa1073070:intron 40.0%
! TTTGCATTTTGGGCAAGAGA+CGG + chr7_2:70426962-70426981 None:intergenic 40.0%
GCATAGGGCTGAAAATCATT+GGG + chr7_2:70427082-70427101 None:intergenic 40.0%
AGCATAGGGCTGAAAATCAT+TGG + chr7_2:70427083-70427102 None:intergenic 40.0%
GGATGCAACATCACAATAAC+AGG + chr7_2:70427149-70427168 None:intergenic 40.0%
!! TAAGGGCTTGCATTTTGATC+AGG + chr7_2:70427235-70427254 None:intergenic 40.0%
! CGCAAAGCATTTACTGCTTA+AGG + chr7_2:70427253-70427272 None:intergenic 40.0%
AACGGTGATGAATGTTGAGG+CGG + chr7_2:70423098-70423117 None:intergenic 45.0%
!! TTGGGATTGAAAGTTGGTGC+TGG - chr7_2:70423139-70423158 Msa1073070:three_prime_UTR 45.0%
!! TGGGATTGAAAGTTGGTGCT+GGG - chr7_2:70423140-70423159 Msa1073070:three_prime_UTR 45.0%
TGTTGACAGCCATACCTCAA+CGG + chr7_2:70423342-70423361 None:intergenic 45.0%
CAGTTGCATTGCAATGTCTG+AGG - chr7_2:70423780-70423799 Msa1073070:intron 45.0%
TTCCACTACTAGCATAACCC+TGG + chr7_2:70423855-70423874 None:intergenic 45.0%
ATTGCTGGGAGACCACTTAA+TGG - chr7_2:70424343-70424362 Msa1073070:intron 45.0%
TAGATCATGGGAGTCTTTGC+AGG - chr7_2:70424441-70424460 Msa1073070:intron 45.0%
ACGATACTGGGCATGATGAA+TGG + chr7_2:70424506-70424525 None:intergenic 45.0%
AGTAGCTGCATTGGAAGCAA+GGG + chr7_2:70424542-70424561 None:intergenic 45.0%
AGCTACTGCGCGAATTCAAA+AGG - chr7_2:70424555-70424574 Msa1073070:CDS 45.0%
GCTACTGCGCGAATTCAAAA+GGG - chr7_2:70424556-70424575 Msa1073070:CDS 45.0%
GGACTTTCGACCAAGTAGAA+TGG - chr7_2:70425042-70425061 Msa1073070:CDS 45.0%
!! GGTTTGGTGACTACCAAAGA+TGG - chr7_2:70425133-70425152 Msa1073070:CDS 45.0%
GCAATTAGCTACCCCATCTT+TGG + chr7_2:70425149-70425168 None:intergenic 45.0%
ACCAGGATCACATGTACTGA+GGG + chr7_2:70425335-70425354 None:intergenic 45.0%
ATGTGATCCTGGTGATCTCA+TGG - chr7_2:70425342-70425361 Msa1073070:CDS 45.0%
CATCTTTGCCAAGAAACTGG+AGG - chr7_2:70425442-70425461 Msa1073070:CDS 45.0%
GACTGCACGAGATGTATACA+TGG + chr7_2:70425576-70425595 None:intergenic 45.0%
GTAGCATACTCTGCTATTGC+TGG + chr7_2:70425639-70425658 None:intergenic 45.0%
TGTCATGAAGAGGCCAAAAC+TGG - chr7_2:70425723-70425742 Msa1073070:intron 45.0%
ATGAAGAGGCCAAAACTGGA+GGG - chr7_2:70425727-70425746 Msa1073070:intron 45.0%
CAGACACGAACTTTGCATCT+TGG + chr7_2:70425765-70425784 None:intergenic 45.0%
CCAAATGGGGCGAAGAAATA+AGG + chr7_2:70425824-70425843 None:intergenic 45.0%
! CCTTATTTCTTCGCCCCATT+TGG - chr7_2:70425821-70425840 Msa1073070:intron 45.0%
GATGGAGAGATCTCAGCAAA+TGG + chr7_2:70425879-70425898 None:intergenic 45.0%
CAACTCACAAGGTGGTTAAC+AGG + chr7_2:70426305-70426324 None:intergenic 45.0%
TAGAGCTACAACTCACAAGG+TGG + chr7_2:70426313-70426332 None:intergenic 45.0%
CAATCCACAATCCAACTGCT+TGG - chr7_2:70426347-70426366 Msa1073070:intron 45.0%
AAGTAACAGGTGGATGACAG+TGG - chr7_2:70426599-70426618 Msa1073070:intron 45.0%
!!! GCTTTTACAGGTTTTGGAGC+AGG - chr7_2:70426919-70426938 Msa1073070:intron 45.0%
!!! AGGTTTTGGAGCAGGAAACA+AGG - chr7_2:70426927-70426946 Msa1073070:intron 45.0%
GAGAGCTTACATAATTGCCC+AGG - chr7_2:70427018-70427037 Msa1073070:intron 45.0%
GCAACATCACAATAACAGGG+AGG + chr7_2:70427145-70427164 None:intergenic 45.0%
GTGATGTTGCATCCATCTAC+CGG - chr7_2:70427155-70427174 Msa1073070:intron 45.0%
TTGTTCATGAGTCCGGTAGA+TGG + chr7_2:70427170-70427189 None:intergenic 45.0%
ACAAGTTCCGGTCCATGAAA+CGG - chr7_2:70427186-70427205 Msa1073070:five_prime_UTR 45.0%
ATCAGGTGATCAGATGGTGT+TGG + chr7_2:70427218-70427237 None:intergenic 45.0%
AAATTGCAAGGGAGACATGC+TGG + chr7_2:70427433-70427452 None:intergenic 45.0%
TTCGTCGGAGTGAGTTTCGA+TGG + chr7_2:70423011-70423030 None:intergenic 50.0%
! GTGCTGCTCTTCATCTTCGT+CGG + chr7_2:70423026-70423045 None:intergenic 50.0%
AATGTTGAGGCGGTGGTTGA+AGG + chr7_2:70423088-70423107 None:intergenic 50.0%
TTCGCGCCTATGTACAACGT+TGG + chr7_2:70423227-70423246 None:intergenic 50.0%
CAGCAGTGCATGGACAATCT+CGG + chr7_2:70423251-70423270 None:intergenic 50.0%
ACACAGTTCACAGCAGTGCA+TGG + chr7_2:70423261-70423280 None:intergenic 50.0%
TGATCGGAGAAGCTTAGTGG+CGG + chr7_2:70423319-70423338 None:intergenic 50.0%
AGCCATACCTCAACGGTGAT+CGG + chr7_2:70423335-70423354 None:intergenic 50.0%
GGAACATGCTGGGTTGTTTG+TGG - chr7_2:70423738-70423757 Msa1073070:intron 50.0%
TGCAATGTCTGAGGGAACAC+CGG - chr7_2:70423789-70423808 Msa1073070:intron 50.0%
CACTACTAGCATAACCCTGG+CGG + chr7_2:70423852-70423871 None:intergenic 50.0%
ACTGTTGCAGCTTCTTCGCT+TGG - chr7_2:70424277-70424296 Msa1073070:intron 50.0%
!! ATGATGACGGCCTTGAAGCA+TGG - chr7_2:70424398-70424417 Msa1073070:intron 50.0%
!! TGATGACGGCCTTGAAGCAT+GGG - chr7_2:70424399-70424418 Msa1073070:intron 50.0%
AAGCTCTCTCCCATGCTTCA+AGG + chr7_2:70424411-70424430 None:intergenic 50.0%
CAGTAGCTGCATTGGAAGCA+AGG + chr7_2:70424543-70424562 None:intergenic 50.0%
AATTCGCGCAGTAGCTGCAT+TGG + chr7_2:70424551-70424570 None:intergenic 50.0%
CATTGTTGTGGACCTGTCCA+AGG - chr7_2:70424597-70424616 Msa1073070:CDS 50.0%
TGTGGACCTGTCCAAGGTAT+TGG - chr7_2:70424603-70424622 Msa1073070:CDS 50.0%
ATGTGAAGGCAGCTTCAGAG+AGG - chr7_2:70425020-70425039 Msa1073070:intron 50.0%
TGTGAAGGCAGCTTCAGAGA+GGG - chr7_2:70425021-70425040 Msa1073070:intron 50.0%
CACCAGGATCACATGTACTG+AGG + chr7_2:70425336-70425355 None:intergenic 50.0%
TACTCTGCTATTGCTGGAGG+TGG + chr7_2:70425633-70425652 None:intergenic 50.0%
GCATACTCTGCTATTGCTGG+AGG + chr7_2:70425636-70425655 None:intergenic 50.0%
CATGAAGAGGCCAAAACTGG+AGG - chr7_2:70425726-70425745 Msa1073070:intron 50.0%
TGAAGAGGCCAAAACTGGAG+GGG - chr7_2:70425728-70425747 Msa1073070:intron 50.0%
! AGTGTATCCCCCTCCAGTTT+TGG + chr7_2:70425739-70425758 None:intergenic 50.0%
TAAGGGTCAATCCACAGACG+CGG + chr7_2:70425806-70425825 None:intergenic 50.0%
TTTCTTCGCCCCATTTGGCA+AGG - chr7_2:70425826-70425845 Msa1073070:intron 50.0%
GCAGATGCTTACCCTGACTA+AGG + chr7_2:70425962-70425981 None:intergenic 50.0%
CTTTAGCATGGGCACATTGC+AGG + chr7_2:70426373-70426392 None:intergenic 50.0%
! CCGGAACTTGTTCATGAGTC+CGG + chr7_2:70427177-70427196 None:intergenic 50.0%
CCGGACTCATGAACAAGTTC+CGG - chr7_2:70427174-70427193 Msa1073070:five_prime_UTR 50.0%
CAAGTTCCGGTCCATGAAAC+GGG - chr7_2:70427187-70427206 Msa1073070:five_prime_UTR 50.0%
TGTTGGTCAGTCCCGTTTCA+TGG + chr7_2:70427201-70427220 None:intergenic 50.0%
GGTGATGAATGTTGAGGCGG+TGG + chr7_2:70423095-70423114 None:intergenic 55.0%
GAGAAGCTTAGTGGCGGCAA+GGG + chr7_2:70423313-70423332 None:intergenic 55.0%
CGGTGATCGGAGAAGCTTAG+TGG + chr7_2:70423322-70423341 None:intergenic 55.0%
AGCTTCTCCGATCACCGTTG+AGG - chr7_2:70423325-70423344 Msa1073070:three_prime_UTR 55.0%
CTCCGATCACCGTTGAGGTA+TGG - chr7_2:70423330-70423349 Msa1073070:three_prime_UTR 55.0%
ATGTCTGAGGGAACACCGGT+TGG - chr7_2:70423793-70423812 Msa1073070:intron 55.0%
! TGTCTGAGGGAACACCGGTT+GGG - chr7_2:70423794-70423813 Msa1073070:intron 55.0%
!!! GCAGGGCAGGTGGTTTTATG+AGG - chr7_2:70423818-70423837 Msa1073070:intron 55.0%
TATGAGGCAAAGACACCGCC+AGG - chr7_2:70423834-70423853 Msa1073070:intron 55.0%
ATGAGGCAAAGACACCGCCA+GGG - chr7_2:70423835-70423854 Msa1073070:intron 55.0%
CGCCAGGGTTATGCTAGTAG+TGG - chr7_2:70423850-70423869 Msa1073070:intron 55.0%
GCCCTCAGTACATGTGATCC+TGG - chr7_2:70425331-70425350 Msa1073070:CDS 55.0%
TCTGCTATTGCTGGAGGTGG+TGG + chr7_2:70425630-70425649 None:intergenic 55.0%
GAAGAGGCCAAAACTGGAGG+GGG - chr7_2:70425729-70425748 Msa1073070:intron 55.0%
CAGGCCAAGCAGTTGGATTG+TGG + chr7_2:70426354-70426373 None:intergenic 55.0%
CACATTGCAGGCCAAGCAGT+TGG + chr7_2:70426361-70426380 None:intergenic 55.0%
GTCAGTCCCGTTTCATGGAC+CGG + chr7_2:70427196-70427215 None:intergenic 55.0%
GCAGTAAATGCTTTGCGGGC+TGG - chr7_2:70427256-70427275 Msa1073070:five_prime_UTR 55.0%
GTTGAGGCGGTGGTTGAAGG+AGG + chr7_2:70423085-70423104 None:intergenic 60.0%
GGAGAAGCTTAGTGGCGGCA+AGG + chr7_2:70423314-70423333 None:intergenic 60.0%
! GTCTGAGGGAACACCGGTTG+GGG - chr7_2:70423795-70423814 Msa1073070:intron 60.0%
! TCTGAGGGAACACCGGTTGG+GGG - chr7_2:70423796-70423815 Msa1073070:intron 60.0%
!! GCGGAGGCGTCTACGATACT+GGG + chr7_2:70424518-70424537 None:intergenic 60.0%
CTGCATTGGAAGCAAGGGCG+CGG + chr7_2:70424537-70424556 None:intergenic 60.0%
TTTCCCGCAGAGAGCAGCTG+AGG - chr7_2:70425680-70425699 Msa1073070:intron 60.0%
TTCCCGCAGAGAGCAGCTGA+GGG - chr7_2:70425681-70425700 Msa1073070:intron 60.0%
AACCCTCAGCTGCTCTCTGC+GGG + chr7_2:70425686-70425705 None:intergenic 60.0%
GAACCCTCAGCTGCTCTCTG+CGG + chr7_2:70425687-70425706 None:intergenic 60.0%
CCACAGACGCGGCATTCAGT+AGG + chr7_2:70425795-70425814 None:intergenic 60.0%
CCTACTGAATGCCGCGTCTG+TGG - chr7_2:70425792-70425811 Msa1073070:intron 60.0%
GCCTGAAGCTCTCACAGCCT+GGG + chr7_2:70427038-70427057 None:intergenic 60.0%
TGCCTGAAGCTCTCACAGCC+TGG + chr7_2:70427039-70427058 None:intergenic 60.0%
TTAGTGGCGGCAAGGGCGAC+GGG + chr7_2:70423306-70423325 None:intergenic 65.0%
CTTAGTGGCGGCAAGGGCGA+CGG + chr7_2:70423307-70423326 None:intergenic 65.0%
!! CGCGGAGGCGTCTACGATAC+TGG + chr7_2:70424519-70424538 None:intergenic 65.0%
! CATTGGAAGCAAGGGCGCGG+AGG + chr7_2:70424534-70424553 None:intergenic 65.0%
GCCCAGGCTGTGAGAGCTTC+AGG - chr7_2:70427034-70427053 Msa1073070:intron 65.0%
TAGTGGCGGCAAGGGCGACG+GGG + chr7_2:70423305-70423324 None:intergenic 70.0%
! AGGGAACACCGGTTGGGGGC+AGG - chr7_2:70423800-70423819 Msa1073070:intron 70.0%
! GGGAACACCGGTTGGGGGCA+GGG - chr7_2:70423801-70423820 Msa1073070:intron 70.0%
AGGGCGACGGGGCTCAGCGT+TGG + chr7_2:70423294-70423313 None:intergenic 75.0%
! ACACCGGTTGGGGGCAGGGC+AGG - chr7_2:70423805-70423824 Msa1073070:intron 75.0%
CCACCTGCCCTGCCCCCAAC+CGG + chr7_2:70423811-70423830 None:intergenic 75.0%
! CCGGTTGGGGGCAGGGCAGG+TGG - chr7_2:70423808-70423827 Msa1073070:intron 80.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 70422999 70427512 70422999 ID=Msa1073070;Name=Msa1073070
chr7_2 mRNA 70422999 70427512 70422999 ID=Msa1073070-mRNA-1;Parent=Msa1073070;Name=Msa1073070-mRNA-1;_AED=0.05;_eAED=0.05;_QI=395|1|1|1|0.75|0.8|5|426|426
chr7_2 exon 70422999 70423582 70422999 ID=Msa1073070-mRNA-1:exon:15874;Parent=Msa1073070-mRNA-1
chr7_2 exon 70424542 70424917 70424542 ID=Msa1073070-mRNA-1:exon:15873;Parent=Msa1073070-mRNA-1
chr7_2 exon 70425022 70425483 70425022 ID=Msa1073070-mRNA-1:exon:15872;Parent=Msa1073070-mRNA-1
chr7_2 exon 70425893 70426224 70425893 ID=Msa1073070-mRNA-1:exon:15871;Parent=Msa1073070-mRNA-1
chr7_2 exon 70427165 70427512 70427165 ID=Msa1073070-mRNA-1:exon:15870;Parent=Msa1073070-mRNA-1
chr7_2 five_prime_UTR 70427165 70427512 70427165 ID=Msa1073070-mRNA-1:five_prime_utr;Parent=Msa1073070-mRNA-1
chr7_2 five_prime_UTR 70426178 70426224 70426178 ID=Msa1073070-mRNA-1:five_prime_utr;Parent=Msa1073070-mRNA-1
chr7_2 CDS 70425893 70426177 70425893 ID=Msa1073070-mRNA-1:cds;Parent=Msa1073070-mRNA-1
chr7_2 CDS 70425022 70425483 70425022 ID=Msa1073070-mRNA-1:cds;Parent=Msa1073070-mRNA-1
chr7_2 CDS 70424542 70424917 70424542 ID=Msa1073070-mRNA-1:cds;Parent=Msa1073070-mRNA-1
chr7_2 CDS 70423425 70423582 70423425 ID=Msa1073070-mRNA-1:cds;Parent=Msa1073070-mRNA-1
chr7_2 three_prime_UTR 70422999 70423424 70422999 ID=Msa1073070-mRNA-1:three_prime_utr;Parent=Msa1073070-mRNA-1
Gene Sequence

>Msa1073070

ATGAATAACATTGCTGGGAGACCACTTAATGGAGATTTAGAAGATGATGATGAAGATGAAGCTAATGATGACGGCCTTGAAGCATGGGAGAGAGCTTATACAGAAGATAGATCATGGGAGTCTTTGCAGGAAGATGAATCTGGACTTCTTCGTCCCATAGATACGACAGCCATTCATCATGCCCAGTATCGTAGACGCCTCCGCGCCCTTGCTTCCAATGCAGCTACTGCGCGAATTCAAAAGGGTTTGATACGATACTTATACATTGTTGTGGACCTGTCCAAGGCAGCTTCAGAGAGGGACTTTCGACCAAGTAGAATGGCTGTTATTGCAAAGCAGGTTGAGTTATTTATCAGGGAGTTCTTTGATCAGAATCCACTTAGTCATGTTGGTTTGGTGACTACCAAAGATGGGGTAGCTAATTGCTTGACAGATCTTGGTGGCAGTCCTGAATCACATATCAAAGCTTTGATGGGTAAACTAGAATGCTCAGGTGATGCCTCCCTACAAAATGCACTAGAACTTGTTCATAGCAATCTAAATCAAATCCCATCATATGGTCATCGAGAAGTTCTGATTTTATATTCGGCCCTCAGTACATGTGATCCTGGTGATCTCATGGAAACTATCCAAAAATGCAAAAAGAGTAAAATAAGATGCTCGGTCATTGGTCTTGCTGCTGAAATGTTTATATGCAAGCATCTTTGCCAAGAAACTGGAGGAACGTATTCAGTTGCACTAGATGAGTCCCACTTTAAAGAGTTAATTCTTGAGCATTCTCCACCACCTCCAGCAATAGCAGAGTATGCTACGGCTAATTTGATTAAGATGGGTTTCCCGCAGAGAGCAGCTGAGGGTTCCGTTGCAATTTGTACATGTCATGAAGAGGCCAAAACTGGAGGGGGATACACTTGTCCAAGATGCAAAGTTCGTGTCTGTGAGCTTCCTACTGAATGCCGCGTCTGTGGATTGACCCTTATTTCTTCGCCCCATTTGGCAAGGTCATATCATCATCTCTTCCCTATAGTGCCATTTGCTGAGATCTCTCCATCATCTCAAAATGATCCAAGCCATAGTTTTCCCAATACTTGTTTTGGTTGTCAACAAAGTCTCCTTAGTCAGGGTTTTGGAGCAGGAAACAAGGCTGAACTTTCCGTCTCTTGCCCAAAATGCAAACAACAATTCTGCCTTGATTGTGACATGTACATTCATGAGAGCTTACATAATTGCCCAGGCTGTGAGAGCTTCAGGCATTCTAAGTCAGTTACTACTGCCCAATGA

Protein sequence

>Msa1073070

MNNIAGRPLNGDLEDDDEDEANDDGLEAWERAYTEDRSWESLQEDESGLLRPIDTTAIHHAQYRRRLRALASNAATARIQKGLIRYLYIVVDLSKAASERDFRPSRMAVIAKQVELFIREFFDQNPLSHVGLVTTKDGVANCLTDLGGSPESHIKALMGKLECSGDASLQNALELVHSNLNQIPSYGHREVLILYSALSTCDPGDLMETIQKCKKSKIRCSVIGLAAEMFICKHLCQETGGTYSVALDESHFKELILEHSPPPPAIAEYATANLIKMGFPQRAAEGSVAICTCHEEAKTGGGYTCPRCKVRVCELPTECRVCGLTLISSPHLARSYHHLFPIVPFAEISPSSQNDPSHSFPNTCFGCQQSLLSQGFGAGNKAELSVSCPKCKQQFCLDCDMYIHESLHNCPGCESFRHSKSVTTAQ*