Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0574760 | XP_003630920.1 | 100.000 | 159 | 0 | 0 | 1 | 159 | 1 | 159 | 1.28e-113 | 328 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0574760 | sp|Q9CAB6|UEV1B_ARATH | 76.730 | 159 | 37 | 0 | 1 | 159 | 1 | 159 | 1.82e-91 | 265 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0574760 | G7LAI8 | 100.000 | 159 | 0 | 0 | 1 | 159 | 1 | 159 | 6.13e-114 | 328 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000550 | Msa0574760 | 0.843696 | 1.195211e-58 | -8.615850e-47 |
| Msa0023840 | Msa0574760 | 0.805587 | 1.242377e-49 | -8.615850e-47 |
| Msa0024210 | Msa0574760 | 0.805148 | 1.535172e-49 | -8.615850e-47 |
| Msa0029540 | Msa0574760 | 0.856929 | 2.306311e-62 | -8.615850e-47 |
| Msa0048000 | Msa0574760 | -0.819118 | 1.373597e-52 | -8.615850e-47 |
| Msa0063350 | Msa0574760 | 0.802064 | 6.698892e-49 | -8.615850e-47 |
| Msa0069310 | Msa0574760 | -0.800051 | 1.727826e-48 | -8.615850e-47 |
| Msa0100000 | Msa0574760 | -0.822655 | 2.109468e-53 | -8.615850e-47 |
| Msa0101810 | Msa0574760 | 0.855270 | 7.063213e-62 | -8.615850e-47 |
| Msa0102750 | Msa0574760 | -0.802823 | 4.672089e-49 | -8.615850e-47 |
| Msa0120010 | Msa0574760 | 0.833948 | 3.976590e-56 | -8.615850e-47 |
| Msa0120020 | Msa0574760 | 0.841594 | 4.321811e-58 | -8.615850e-47 |
| Msa0133980 | Msa0574760 | 0.835340 | 1.776603e-56 | -8.615850e-47 |
| Msa0138970 | Msa0574760 | 0.851166 | 1.059152e-60 | -8.615850e-47 |
| Msa0150800 | Msa0574760 | -0.806774 | 6.986878e-50 | -8.615850e-47 |
| Msa0156650 | Msa0574760 | 0.829662 | 4.540333e-55 | -8.615850e-47 |
| Msa0158130 | Msa0574760 | 0.838598 | 2.614740e-57 | -8.615850e-47 |
| Msa0169140 | Msa0574760 | 0.813141 | 2.974845e-51 | -8.615850e-47 |
| Msa0172350 | Msa0574760 | -0.814542 | 1.460801e-51 | -8.615850e-47 |
| Msa0178930 | Msa0574760 | -0.810850 | 9.388813e-51 | -8.615850e-47 |
| Msa0185090 | Msa0574760 | 0.808191 | 3.496329e-50 | -8.615850e-47 |
| Msa0188150 | Msa0574760 | -0.805067 | 1.596740e-49 | -8.615850e-47 |
| Msa0196020 | Msa0574760 | 0.836075 | 1.156998e-56 | -8.615850e-47 |
| Msa0196500 | Msa0574760 | 0.800454 | 1.430323e-48 | -8.615850e-47 |
| Msa0215320 | Msa0574760 | 0.884003 | 2.778788e-71 | -8.615850e-47 |
| Msa0222920 | Msa0574760 | -0.803851 | 2.861874e-49 | -8.615850e-47 |
| Msa0223410 | Msa0574760 | 0.834533 | 2.837738e-56 | -8.615850e-47 |
| Msa0226250 | Msa0574760 | -0.802935 | 4.429943e-49 | -8.615850e-47 |
| Msa0376590 | Msa0574760 | -0.826623 | 2.450909e-54 | -8.615850e-47 |
| Msa0381610 | Msa0574760 | 0.807626 | 4.612033e-50 | -8.615850e-47 |
| Msa0392040 | Msa0574760 | 0.815443 | 9.221100e-52 | -8.615850e-47 |
| Msa0405880 | Msa0574760 | -0.813187 | 2.905616e-51 | -8.615850e-47 |
| Msa0414950 | Msa0574760 | 0.815468 | 9.102863e-52 | -8.615850e-47 |
| Msa0420590 | Msa0574760 | 0.821749 | 3.421646e-53 | -8.615850e-47 |
| Msa0420650 | Msa0574760 | 0.819467 | 1.143893e-52 | -8.615850e-47 |
| Msa0421780 | Msa0574760 | 0.815551 | 8.723207e-52 | -8.615850e-47 |
| Msa0423360 | Msa0574760 | 0.811332 | 7.381595e-51 | -8.615850e-47 |
| Msa0436280 | Msa0574760 | 0.836325 | 9.999406e-57 | -8.615850e-47 |
| Msa0436370 | Msa0574760 | -0.826286 | 2.949207e-54 | -8.615850e-47 |
| Msa0442850 | Msa0574760 | -0.800589 | 1.342637e-48 | -8.615850e-47 |
| Msa0444750 | Msa0574760 | 0.801531 | 8.617382e-49 | -8.615850e-47 |
| Msa0448550 | Msa0574760 | 0.816323 | 5.866592e-52 | -8.615850e-47 |
| Msa0458440 | Msa0574760 | -0.810308 | 1.229640e-50 | -8.615850e-47 |
| Msa0466390 | Msa0574760 | -0.806086 | 9.755213e-50 | -8.615850e-47 |
| Msa0467900 | Msa0574760 | 0.826977 | 2.017155e-54 | -8.615850e-47 |
| Msa0467960 | Msa0574760 | 0.802159 | 6.402017e-49 | -8.615850e-47 |
| Msa0469940 | Msa0574760 | 0.841917 | 3.552821e-58 | -8.615850e-47 |
| Msa0473240 | Msa0574760 | -0.811463 | 6.915352e-51 | -8.615850e-47 |
| Msa0241190 | Msa0574760 | -0.825794 | 3.859253e-54 | -8.615850e-47 |
| Msa0249560 | Msa0574760 | -0.838003 | 3.722073e-57 | -8.615850e-47 |
| Msa0260810 | Msa0574760 | -0.823025 | 1.729551e-53 | -8.615850e-47 |
| Msa0260820 | Msa0574760 | 0.858608 | 7.328605e-63 | -8.615850e-47 |
| Msa0266000 | Msa0574760 | 0.829098 | 6.224665e-55 | -8.615850e-47 |
| Msa0267760 | Msa0574760 | -0.806008 | 1.013131e-49 | -8.615850e-47 |
| Msa0271960 | Msa0574760 | 0.802229 | 6.195317e-49 | -8.615850e-47 |
| Msa0272480 | Msa0574760 | 0.818323 | 2.080947e-52 | -8.615850e-47 |
| Msa0279170 | Msa0574760 | -0.807292 | 5.428686e-50 | -8.615850e-47 |
| Msa0294560 | Msa0574760 | 0.830618 | 2.653272e-55 | -8.615850e-47 |
| Msa0302580 | Msa0574760 | 0.814657 | 1.377912e-51 | -8.615850e-47 |
| Msa0306210 | Msa0574760 | 0.835840 | 1.327620e-56 | -8.615850e-47 |
| Msa0312690 | Msa0574760 | 0.811205 | 7.865926e-51 | -8.615850e-47 |
| Msa0326520 | Msa0574760 | -0.807375 | 5.213584e-50 | -8.615850e-47 |
| Msa0328070 | Msa0574760 | -0.803803 | 2.928290e-49 | -8.615850e-47 |
| Msa0333720 | Msa0574760 | 0.807744 | 4.352555e-50 | -8.615850e-47 |
| Msa0340450 | Msa0574760 | -0.802944 | 4.412222e-49 | -8.615850e-47 |
| Msa0344690 | Msa0574760 | 0.845238 | 4.600384e-59 | -8.615850e-47 |
| Msa0344830 | Msa0574760 | -0.810652 | 1.036345e-50 | -8.615850e-47 |
| Msa0350990 | Msa0574760 | -0.810287 | 1.242434e-50 | -8.615850e-47 |
| Msa0351030 | Msa0574760 | -0.816213 | 6.210864e-52 | -8.615850e-47 |
| Msa0354800 | Msa0574760 | 0.823071 | 1.686809e-53 | -8.615850e-47 |
| Msa0356890 | Msa0574760 | 0.824180 | 9.282187e-54 | -8.615850e-47 |
| Msa0483150 | Msa0574760 | -0.805680 | 1.187477e-49 | -8.615850e-47 |
| Msa0516370 | Msa0574760 | -0.828458 | 8.889794e-55 | -8.615850e-47 |
| Msa0524890 | Msa0574760 | 0.805811 | 1.114897e-49 | -8.615850e-47 |
| Msa0526100 | Msa0574760 | 0.825404 | 4.775165e-54 | -8.615850e-47 |
| Msa0526710 | Msa0574760 | -0.813022 | 3.158140e-51 | -8.615850e-47 |
| Msa0531990 | Msa0574760 | 0.806243 | 9.043910e-50 | -8.615850e-47 |
| Msa0532100 | Msa0574760 | 0.808074 | 3.703039e-50 | -8.615850e-47 |
| Msa0532550 | Msa0574760 | -0.829448 | 5.118519e-55 | -8.615850e-47 |
| Msa0540020 | Msa0574760 | -0.808928 | 2.433876e-50 | -8.615850e-47 |
| Msa0548280 | Msa0574760 | 0.820063 | 8.361409e-53 | -8.615850e-47 |
| Msa0553220 | Msa0574760 | 0.809123 | 2.210561e-50 | -8.615850e-47 |
| Msa0558690 | Msa0574760 | -0.816270 | 6.028498e-52 | -8.615850e-47 |
| Msa0562440 | Msa0574760 | -0.803479 | 3.417624e-49 | -8.615850e-47 |
| Msa0566500 | Msa0574760 | 0.846625 | 1.931626e-59 | -8.615850e-47 |
| Msa0567020 | Msa0574760 | -0.806987 | 6.298413e-50 | -8.615850e-47 |
| Msa0572420 | Msa0574760 | -0.816725 | 4.768767e-52 | -8.615850e-47 |
| Msa0572480 | Msa0574760 | -0.824614 | 7.335844e-54 | -8.615850e-47 |
| Msa0574760 | Msa0581050 | -0.817432 | 3.307520e-52 | -8.615850e-47 |
| Msa0574760 | Msa0585000 | 0.812925 | 3.316565e-51 | -8.615850e-47 |
| Msa0574760 | Msa0613460 | -0.845734 | 3.376256e-59 | -8.615850e-47 |
| Msa0574760 | Msa0619470 | -0.811638 | 6.333755e-51 | -8.615850e-47 |
| Msa0574760 | Msa0638280 | -0.801342 | 9.420593e-49 | -8.615850e-47 |
| Msa0574760 | Msa0647450 | 0.808093 | 3.668900e-50 | -8.615850e-47 |
| Msa0574760 | Msa0648240 | 0.816689 | 4.859541e-52 | -8.615850e-47 |
| Msa0574760 | Msa0648520 | -0.809920 | 1.490429e-50 | -8.615850e-47 |
| Msa0574760 | Msa0654010 | -0.824115 | 9.613654e-54 | -8.615850e-47 |
| Msa0574760 | Msa0654930 | 0.832157 | 1.109360e-55 | -8.615850e-47 |
| Msa0574760 | Msa0658570 | -0.827323 | 1.666595e-54 | -8.615850e-47 |
| Msa0574760 | Msa0663380 | -0.809731 | 1.636709e-50 | -8.615850e-47 |
| Msa0574760 | Msa0679290 | 0.831777 | 1.377280e-55 | -8.615850e-47 |
| Msa0574760 | Msa0691050 | -0.851106 | 1.101585e-60 | -8.615850e-47 |
| Msa0574760 | Msa0693380 | -0.803850 | 2.863049e-49 | -8.615850e-47 |
| Msa0574760 | Msa0701860 | 0.810978 | 8.808165e-51 | -8.615850e-47 |
| Msa0574760 | Msa0718070 | -0.815648 | 8.302488e-52 | -8.615850e-47 |
| Msa0574760 | Msa0731940 | -0.818647 | 1.757814e-52 | -8.615850e-47 |
| Msa0574760 | Msa0735170 | -0.814147 | 1.786719e-51 | -8.615850e-47 |
| Msa0574760 | Msa0743680 | -0.827405 | 1.593157e-54 | -8.615850e-47 |
| Msa0574760 | Msa0750240 | -0.813379 | 2.636802e-51 | -8.615850e-47 |
| Msa0574760 | Msa0754720 | 0.830972 | 2.172881e-55 | -8.615850e-47 |
| Msa0574760 | Msa0756630 | 0.838385 | 2.967251e-57 | -8.615850e-47 |
| Msa0574760 | Msa0757450 | 0.880684 | 4.481214e-70 | -8.615850e-47 |
| Msa0574760 | Msa0757500 | 0.889615 | 2.067138e-73 | -8.615850e-47 |
| Msa0574760 | Msa0764130 | 0.811298 | 7.508105e-51 | -8.615850e-47 |
| Msa0574760 | Msa0766630 | -0.802702 | 4.949509e-49 | -8.615850e-47 |
| Msa0574760 | Msa0777570 | 0.859183 | 4.934256e-63 | -8.615850e-47 |
| Msa0574760 | Msa0800770 | -0.829324 | 5.487586e-55 | -8.615850e-47 |
| Msa0574760 | Msa0802470 | 0.836641 | 8.308118e-57 | -8.615850e-47 |
| Msa0574760 | Msa0810220 | -0.814825 | 1.264985e-51 | -8.615850e-47 |
| Msa0574760 | Msa0834880 | -0.805799 | 1.121126e-49 | -8.615850e-47 |
| Msa0574760 | Msa0837350 | 0.810453 | 1.144095e-50 | -8.615850e-47 |
| Msa0574760 | Msa0838930 | -0.831355 | 1.749599e-55 | -8.615850e-47 |
| Msa0574760 | Msa0843780 | 0.808961 | 2.394919e-50 | -8.615850e-47 |
| Msa0574760 | Msa0862800 | 0.806269 | 8.928629e-50 | -8.615850e-47 |
| Msa0574760 | Msa0863800 | -0.816252 | 6.087202e-52 | -8.615850e-47 |
| Msa0574760 | Msa0870530 | -0.844403 | 7.727508e-59 | -8.615850e-47 |
| Msa0574760 | Msa0891040 | -0.840342 | 9.213991e-58 | -8.615850e-47 |
| Msa0574760 | Msa0896220 | -0.813119 | 3.007765e-51 | -8.615850e-47 |
| Msa0574760 | Msa0901630 | -0.866365 | 3.006889e-65 | -8.615850e-47 |
| Msa0574760 | Msa0903700 | -0.823575 | 1.286796e-53 | -8.615850e-47 |
| Msa0574760 | Msa0908770 | 0.821460 | 3.990185e-53 | -8.615850e-47 |
| Msa0574760 | Msa0925660 | -0.824458 | 7.984169e-54 | -8.615850e-47 |
| Msa0574760 | Msa0930830 | 0.809798 | 1.583422e-50 | -8.615850e-47 |
| Msa0574760 | Msa0930910 | 0.990892 | 7.684793e-185 | -8.615850e-47 |
| Msa0574760 | Msa0936210 | -0.806795 | 6.914973e-50 | -8.615850e-47 |
| Msa0574760 | Msa0942550 | 0.813759 | 2.175338e-51 | -8.615850e-47 |
| Msa0574760 | Msa0942560 | 0.807282 | 5.455442e-50 | -8.615850e-47 |
| Msa0574760 | Msa0969520 | -0.808404 | 3.149851e-50 | -8.615850e-47 |
| Msa0574760 | Msa0973150 | -0.827792 | 1.286163e-54 | -8.615850e-47 |
| Msa0574760 | Msa0981820 | 0.804515 | 2.082122e-49 | -8.615850e-47 |
| Msa0574760 | Msa0990960 | -0.840237 | 9.815832e-58 | -8.615850e-47 |
| Msa0574760 | Msa1000300 | -0.830719 | 2.507022e-55 | -8.615850e-47 |
| Msa0574760 | Msa1004900 | 0.805762 | 1.141704e-49 | -8.615850e-47 |
| Msa0574760 | Msa1007610 | 0.810243 | 1.270129e-50 | -8.615850e-47 |
| Msa0574760 | Msa1021340 | -0.803789 | 2.947639e-49 | -8.615850e-47 |
| Msa0574760 | Msa1037650 | 0.812910 | 3.341952e-51 | -8.615850e-47 |
| Msa0574760 | Msa1037700 | 0.827237 | 1.748438e-54 | -8.615850e-47 |
| Msa0574760 | Msa1040120 | -0.831769 | 1.383204e-55 | -8.615850e-47 |
| Msa0574760 | Msa1061020 | 0.840151 | 1.033520e-57 | -8.615850e-47 |
| Msa0574760 | Msa1061060 | 0.829332 | 5.461828e-55 | -8.615850e-47 |
| Msa0574760 | Msa1068200 | 0.848013 | 8.034378e-60 | -8.615850e-47 |
| Msa0574760 | Msa1075080 | 0.813370 | 2.649324e-51 | -8.615850e-47 |
| Msa0574760 | Msa1075220 | 0.862076 | 6.547766e-64 | -8.615850e-47 |
| Msa0574760 | Msa1080160 | -0.818121 | 2.312859e-52 | -8.615850e-47 |
| Msa0574760 | Msa1083410 | -0.806181 | 9.318648e-50 | -8.615850e-47 |
| Msa0574760 | Msa1084260 | -0.839115 | 1.922225e-57 | -8.615850e-47 |
| Msa0574760 | Msa1098250 | -0.806051 | 9.926484e-50 | -8.615850e-47 |
| Msa0574760 | Msa1098270 | -0.813811 | 2.119000e-51 | -8.615850e-47 |
| Msa0574760 | Msa1116130 | 0.832311 | 1.016372e-55 | -8.615850e-47 |
| Msa0574760 | Msa1116450 | -0.807497 | 4.911536e-50 | -8.615850e-47 |
| Msa0574760 | Msa1118760 | -0.809943 | 1.473776e-50 | -8.615850e-47 |
| Msa0574760 | Msa1121450 | 0.826022 | 3.406550e-54 | -8.615850e-47 |
| Msa0574760 | Msa1121490 | -0.809577 | 1.766522e-50 | -8.615850e-47 |
| Msa0574760 | Msa1130210 | 0.803078 | 4.139376e-49 | -8.615850e-47 |
| Msa0574760 | Msa1130270 | 0.845705 | 3.437290e-59 | -8.615850e-47 |
| Msa0574760 | Msa1131670 | 0.806250 | 9.010823e-50 | -8.615850e-47 |
| Msa0574760 | Msa1133220 | -0.801452 | 8.946154e-49 | -8.615850e-47 |
| Msa0574760 | Msa1137570 | -0.829108 | 6.191116e-55 | -8.615850e-47 |
| Msa0574760 | Msa1139000 | 0.838041 | 3.638417e-57 | -8.615850e-47 |
| Msa0574760 | Msa1144720 | 0.837169 | 6.092366e-57 | -8.615850e-47 |
| Msa0574760 | Msa1156340 | 0.840410 | 8.840741e-58 | -8.615850e-47 |
| Msa0574760 | Msa1158310 | -0.810105 | 1.360039e-50 | -8.615850e-47 |
| Msa0574760 | Msa1162550 | 0.867649 | 1.171532e-65 | -8.615850e-47 |
| Msa0574760 | Msa1164170 | 0.820874 | 5.446989e-53 | -8.615850e-47 |
| Msa0574760 | Msa1186950 | 0.837698 | 4.459267e-57 | -8.615850e-47 |
| Msa0574760 | Msa1204100 | 0.815453 | 9.173624e-52 | -8.615850e-47 |
| Msa0574760 | Msa1217860 | -0.807175 | 5.747904e-50 | -8.615850e-47 |
| Msa0574760 | Msa1226510 | -0.814547 | 1.457056e-51 | -8.615850e-47 |
| Msa0574760 | Msa1231240 | -0.831017 | 2.118864e-55 | -8.615850e-47 |
| Msa0574760 | Msa1239720 | -0.815070 | 1.115920e-51 | -8.615850e-47 |
| Msa0574760 | Msa1244750 | 0.845965 | 2.922479e-59 | -8.615850e-47 |
| Msa0574760 | Msa1257800 | 0.800183 | 1.623897e-48 | -8.615850e-47 |
| Msa0574760 | Msa1259490 | 0.812913 | 3.337708e-51 | -8.615850e-47 |
| Msa0574760 | Msa1262990 | 0.808268 | 3.366559e-50 | -8.615850e-47 |
| Msa0574760 | Msa1269580 | 0.835732 | 1.414219e-56 | -8.615850e-47 |
| Msa0574760 | Msa1282580 | 0.844172 | 8.909873e-59 | -8.615850e-47 |
| Msa0574760 | Msa1284260 | -0.807435 | 5.062104e-50 | -8.615850e-47 |
| Msa0574760 | Msa1296460 | 0.810802 | 9.617368e-51 | -8.615850e-47 |
| Msa0574760 | Msa1299180 | 0.817069 | 3.992324e-52 | -8.615850e-47 |
| Msa0574760 | Msa1310770 | 0.803434 | 3.492582e-49 | -8.615850e-47 |
| Msa0574760 | Msa1311960 | -0.806278 | 8.888898e-50 | -8.615850e-47 |
| Msa0574760 | Msa1317480 | 0.804764 | 1.846998e-49 | -8.615850e-47 |
| Msa0574760 | Msa1322860 | -0.800091 | 1.695997e-48 | -8.615850e-47 |
| Msa0574760 | Msa1327050 | -0.824279 | 8.795978e-54 | -8.615850e-47 |
| Msa0574760 | Msa1328290 | 0.800812 | 1.209172e-48 | -8.615850e-47 |
| Msa0574760 | Msa1329050 | 0.814555 | 1.451456e-51 | -8.615850e-47 |
| Msa0574760 | Msa1350310 | -0.827188 | 1.795926e-54 | -8.615850e-47 |
| Msa0574760 | Msa1352540 | 0.805162 | 1.524956e-49 | -8.615850e-47 |
| Msa0574760 | Msa1353470 | -0.814355 | 1.607038e-51 | -8.615850e-47 |
| Msa0574760 | Msa1362510 | -0.812324 | 4.490722e-51 | -8.615850e-47 |
| Msa0574760 | Msa1364470 | 0.819035 | 1.434730e-52 | -8.615850e-47 |
| Msa0574760 | Msa1369530 | -0.824620 | 7.311943e-54 | -8.615850e-47 |
| Msa0574760 | Msa1376890 | -0.826488 | 2.638779e-54 | -8.615850e-47 |
| Msa0574760 | Msa1379850 | -0.828147 | 1.056606e-54 | -8.615850e-47 |
| Msa0574760 | Msa1390120 | -0.861224 | 1.192328e-63 | -8.615850e-47 |
| Msa0574760 | Msa1395530 | -0.858975 | 5.694009e-63 | -8.615850e-47 |
| Msa0574760 | Msa1404540 | -0.817953 | 2.523560e-52 | -8.615850e-47 |
| Msa0574760 | Msa1407640 | 0.806574 | 7.700493e-50 | -8.615850e-47 |
| Msa0574760 | Msa1408620 | 0.810922 | 9.060643e-51 | -8.615850e-47 |
| Msa0574760 | Msa1410760 | 0.805119 | 1.556752e-49 | -8.615850e-47 |
| Msa0574760 | Msa1429360 | 0.836128 | 1.121765e-56 | -8.615850e-47 |
| Msa0574760 | Msa1431060 | -0.812263 | 4.629875e-51 | -8.615850e-47 |
| Msa0574760 | Msa1439960 | -0.801405 | 9.144986e-49 | -8.615850e-47 |
| Msa0574760 | Msa1447110 | -0.826300 | 2.925470e-54 | -8.615850e-47 |
| Msa0574760 | Msa1451620 | 0.864601 | 1.081454e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0574760 | MtrunA17_Chr8g0391521 | 100.000 | 159 | 0 | 0 | 1 | 159 | 1 | 159 | 1.18e-117 | 328 |
| Msa0574760 | MtrunA17_Chr1g0177971 | 80.142 | 141 | 28 | 0 | 1 | 141 | 3 | 143 | 4.38e-84 | 243 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0574760 | AT1G70660.1 | 76.730 | 159 | 37 | 0 | 1 | 159 | 1 | 159 | 1.85e-92 | 265 |
| Msa0574760 | AT1G23260.1 | 75.472 | 159 | 38 | 1 | 1 | 159 | 1 | 158 | 3.06e-91 | 262 |
| Msa0574760 | AT1G70650.2 | 76.316 | 152 | 36 | 0 | 8 | 159 | 444 | 595 | 3.00e-84 | 259 |
| Msa0574760 | AT1G70660.2 | 78.472 | 144 | 31 | 0 | 1 | 144 | 1 | 144 | 4.70e-84 | 244 |
| Msa0574760 | AT3G52560.1 | 77.305 | 141 | 32 | 0 | 1 | 141 | 3 | 143 | 3.65e-81 | 236 |
| Msa0574760 | AT3G52560.2 | 76.224 | 143 | 33 | 1 | 1 | 142 | 3 | 145 | 2.43e-79 | 232 |
| Msa0574760 | AT2G36060.1 | 77.372 | 137 | 31 | 0 | 5 | 141 | 6 | 142 | 1.04e-78 | 230 |
| Msa0574760 | AT2G36060.2 | 76.812 | 138 | 31 | 1 | 5 | 141 | 6 | 143 | 7.10e-77 | 226 |
| Msa0574760 | AT3G52560.4 | 68.125 | 160 | 33 | 1 | 1 | 142 | 3 | 162 | 1.26e-76 | 226 |
| Msa0574760 | AT2G36060.3 | 76.642 | 137 | 31 | 1 | 5 | 141 | 6 | 141 | 3.29e-76 | 224 |
| Msa0574760 | AT1G23260.2 | 71.774 | 124 | 34 | 1 | 36 | 159 | 1 | 123 | 7.69e-68 | 202 |
| Msa0574760 | AT3G52560.3 | 71.963 | 107 | 29 | 1 | 36 | 141 | 1 | 107 | 5.04e-55 | 169 |
Find 75 sgRNAs with CRISPR-Local
Find 351 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTAGGAATTTCAGATTAT+TGG | 0.156726 | 4_1:-78493437 | Msa0574760:CDS |
| TCATCCTGAAATTGAAATTA+TGG | 0.196148 | 4_1:-78490934 | Msa0574760:three_prime_UTR |
| CTTCCGATTCATCATCAAAA+TGG | 0.205164 | 4_1:-78495915 | Msa0574760:exon |
| ACATCCATAATTTCAATTTC+AGG | 0.225117 | 4_1:+78490930 | None:intergenic |
| GCAAGCATGGGAAACAAATT+TGG | 0.244783 | 4_1:+78492467 | None:intergenic |
| CTTTACTGCGGACTCTAATT+TGG | 0.258224 | 4_1:-78491025 | Msa0574760:three_prime_UTR |
| GAAAATTATGAAAACGAAAT+AGG | 0.277634 | 4_1:+78490881 | None:intergenic |
| TCATGGACTGGGACTATTAT+TGG | 0.312389 | 4_1:-78493331 | Msa0574760:CDS |
| AATCGGAAGAGCTAGGGTTT+TGG | 0.328866 | 4_1:+78495929 | None:intergenic |
| TAACTACCACTCCAGATTCT+TGG | 0.355892 | 4_1:+78492585 | None:intergenic |
| ATCTCAGCACCAGCCCCTTT+TGG | 0.363252 | 4_1:+78491243 | None:intergenic |
| CTAACAGATGGTGGATTGTC+TGG | 0.370636 | 4_1:+78492641 | None:intergenic |
| ATTATATTGAATAGATAATC+CGG | 0.384525 | 4_1:-78491172 | Msa0574760:three_prime_UTR |
| ACTTGCGTCAACCAAGAATC+TGG | 0.394238 | 4_1:-78492596 | Msa0574760:CDS |
| GAATAGATAATCCGGGTTCA+TGG | 0.396088 | 4_1:-78491164 | Msa0574760:three_prime_UTR |
| GAGCGAGGTGAGAAGGGAAT+TGG | 0.414625 | 4_1:-78493406 | Msa0574760:CDS |
| ACAATTCACGTTAAAATTCA+AGG | 0.419494 | 4_1:+78491067 | None:intergenic |
| CAGGAGGCTGAGATAGCTTC+CGG | 0.421676 | 4_1:+78492372 | None:intergenic |
| TGCCACAAAACAACTTCAAC+TGG | 0.424473 | 4_1:+78492672 | None:intergenic |
| GATGTTGTATCGTGTAATTC+AGG | 0.426522 | 4_1:-78491223 | Msa0574760:exon |
| TGACCATTGCGTTTGTAACC+TGG | 0.444410 | 4_1:-78491115 | Msa0574760:three_prime_UTR |
| AATAGTAGAGAGAGAAAAGC+AGG | 0.450884 | 4_1:+78495952 | None:intergenic |
| TTCCGATTCATCATCAAAAT+GGG | 0.456771 | 4_1:-78495914 | Msa0574760:exon |
| AGTCACTCTTTGATTTCTCC+AGG | 0.458828 | 4_1:+78491097 | None:intergenic |
| ATATTCATGCAGTCATGGAC+TGG | 0.466117 | 4_1:-78493343 | Msa0574760:CDS |
| TCCAATAATCTGAAATTCCT+AGG | 0.468152 | 4_1:+78493436 | None:intergenic |
| TGTTTCCCATGCTTGCTAGT+TGG | 0.469816 | 4_1:-78492460 | Msa0574760:CDS |
| AAATTATGGATGTATCCATT+TGG | 0.473820 | 4_1:-78490920 | Msa0574760:three_prime_UTR |
| AAATGATGTCCCCACAAAAC+CGG | 0.476684 | 4_1:-78492391 | Msa0574760:CDS |
| TAAATTATTCAACAACCAAA+TGG | 0.478848 | 4_1:+78490905 | None:intergenic |
| TCACGTTAAAATTCAAGGAT+AGG | 0.481795 | 4_1:+78491072 | None:intergenic |
| AGAGCTTGAGCGAGGTGAGA+AGG | 0.483020 | 4_1:-78493413 | Msa0574760:CDS |
| AGATGGAAGGATTGACCAAA+AGG | 0.483239 | 4_1:-78491258 | Msa0574760:CDS |
| GATGATGAATCGGAAGAGCT+AGG | 0.488456 | 4_1:+78495922 | None:intergenic |
| AATAGATAATCCGGGTTCAT+GGG | 0.497024 | 4_1:-78491163 | Msa0574760:three_prime_UTR |
| GAGAGAGAAAAGCAGGTAGG+TGG | 0.498593 | 4_1:+78495959 | None:intergenic |
| GAGCTTGAGCGAGGTGAGAA+GGG | 0.501264 | 4_1:-78493412 | Msa0574760:CDS |
| TGTCTATCAATGCAGTTCCT+AGG | 0.505496 | 4_1:-78493453 | Msa0574760:intron |
| GAAAGAGATAAAGACGAAGA+AGG | 0.512525 | 4_1:+78495987 | None:intergenic |
| GATGGAAGGATTGACCAAAA+GGG | 0.513888 | 4_1:-78491257 | Msa0574760:CDS |
| TGCGGACTCTAATTTGGCAG+TGG | 0.513983 | 4_1:-78491019 | Msa0574760:three_prime_UTR |
| GGAGACGGAACTGTTAGCTA+TGG | 0.518406 | 4_1:-78493385 | Msa0574760:CDS |
| TGACTTTCAGGCAATGAAGA+TGG | 0.525323 | 4_1:-78491275 | Msa0574760:intron |
| ATCATCAAAATGGGTTCTGA+AGG | 0.533662 | 4_1:-78495905 | Msa0574760:exon |
| ATGATGAATCGGAAGAGCTA+GGG | 0.534938 | 4_1:+78495923 | None:intergenic |
| ATGATATATTCATGCAGTCA+TGG | 0.540165 | 4_1:-78493348 | Msa0574760:CDS |
| TATTCATGCAGTCATGGACT+GGG | 0.545769 | 4_1:-78493342 | Msa0574760:CDS |
| AAGGATTGACCAAAAGGGGC+TGG | 0.566071 | 4_1:-78491252 | Msa0574760:CDS |
| TTATATCAGACTGTTCATGA+AGG | 0.568360 | 4_1:-78492704 | Msa0574760:intron |
| CATCTGTTAGATTTCAGACA+AGG | 0.568599 | 4_1:-78492628 | Msa0574760:CDS |
| TTATATTGAATAGATAATCC+GGG | 0.575627 | 4_1:-78491171 | Msa0574760:three_prime_UTR |
| CTTGTCTGAAATCTAACAGA+TGG | 0.576929 | 4_1:+78492629 | None:intergenic |
| CGGAACTGTTAGCTATGGGA+TGG | 0.580756 | 4_1:-78493380 | Msa0574760:CDS |
| TTTCAGGCAATGAAGATGGA+AGG | 0.586005 | 4_1:-78491271 | Msa0574760:intron |
| GCGGACTCTAATTTGGCAGT+GGG | 0.589226 | 4_1:-78491018 | Msa0574760:three_prime_UTR |
| GAGACGGAACTGTTAGCTAT+GGG | 0.590695 | 4_1:-78493384 | Msa0574760:CDS |
| AAGCTATCTCAGCCTCCTGA+AGG | 0.591688 | 4_1:-78492368 | Msa0574760:intron |
| GTAGAGAGAGAAAAGCAGGT+AGG | 0.593831 | 4_1:+78495956 | None:intergenic |
| ATGGAAGGATTGACCAAAAG+GGG | 0.614785 | 4_1:-78491256 | Msa0574760:CDS |
| GTCTGAAATCTAACAGATGG+TGG | 0.615185 | 4_1:+78492632 | None:intergenic |
| TCTGAAGGATCCACCGTCGT+TGG | 0.619901 | 4_1:-78495890 | Msa0574760:intron |
| GGTGAGAAGGGAATTGGAGA+CGG | 0.623567 | 4_1:-78493400 | Msa0574760:CDS |
| TCTCCAGGTTACAAACGCAA+TGG | 0.628468 | 4_1:+78491112 | None:intergenic |
| AATGCATTAACCCATGAACC+CGG | 0.634518 | 4_1:+78491153 | None:intergenic |
| CTTGAAACTGCTCTTTACTG+CGG | 0.653085 | 4_1:-78491037 | Msa0574760:three_prime_UTR |
| TTGGAAAAGAGAGTCTACAA+TGG | 0.665507 | 4_1:-78492441 | Msa0574760:CDS |
| ATGATTGTAATAATGAAGTG+TGG | 0.667274 | 4_1:+78496019 | None:intergenic |
| TTATTGGAAGAGCTTGAGCG+AGG | 0.667755 | 4_1:-78493421 | Msa0574760:CDS |
| AAGAATAGAACTTACACCCG+GGG | 0.674960 | 4_1:+78493306 | None:intergenic |
| CGTCAACCAAGAATCTGGAG+TGG | 0.681244 | 4_1:-78492591 | Msa0574760:intron |
| AAGAATGACACACCTTCAGG+AGG | 0.686018 | 4_1:+78492356 | None:intergenic |
| TGGAGAATTACCAACGACGG+TGG | 0.699097 | 4_1:+78495880 | None:intergenic |
| AGAATAGAACTTACACCCGG+GGG | 0.740269 | 4_1:+78493307 | None:intergenic |
| TGTTGGAGAATTACCAACGA+CGG | 0.741066 | 4_1:+78495877 | None:intergenic |
| GAATAGAACTTACACCCGGG+GGG | 0.766646 | 4_1:+78493308 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTATGTTAAACAAAAAAA+TGG | + | chr4_1:78491628-78491647 | None:intergenic | 10.0% |
| !! | AATAATGAAAAAGAATATAA+AGG | - | chr4_1:78492429-78492448 | Msa0574760:CDS | 10.0% |
| !! | ATAATGAAAAAGAATATAAA+GGG | - | chr4_1:78492430-78492449 | Msa0574760:CDS | 10.0% |
| !!! | AACTAGTAATTTTTTTTTTA+GGG | + | chr4_1:78492492-78492511 | None:intergenic | 10.0% |
| !!! | AAACTAGTAATTTTTTTTTT+AGG | + | chr4_1:78492493-78492512 | None:intergenic | 10.0% |
| !! | TAAATAGAATTTAATATTTC+AGG | + | chr4_1:78494026-78494045 | None:intergenic | 10.0% |
| !!! | ACTAGTAATTTTTTTTTTAG+GGG | + | chr4_1:78492491-78492510 | None:intergenic | 15.0% |
| !! | AATTATAAACTTCATCAAAA+TGG | - | chr4_1:78492929-78492948 | Msa0574760:intron | 15.0% |
| !! | ATTATAAACTTCATCAAAAT+GGG | - | chr4_1:78492930-78492949 | Msa0574760:intron | 15.0% |
| !! | AATAAATAGTAATAGTTACA+AGG | + | chr4_1:78495236-78495255 | None:intergenic | 15.0% |
| !! | ATTATATTGAATAGATAATC+CGG | - | chr4_1:78495743-78495762 | Msa0574760:intron | 15.0% |
| !! | AAAAAGTAGAAAGAGATAAT+AGG | + | chr4_1:78491085-78491104 | None:intergenic | 20.0% |
| !! | TATGTTAAACAAAAAAATGG+CGG | + | chr4_1:78491625-78491644 | None:intergenic | 20.0% |
| !!! | TATGGGTACTTTAAAATTTA+TGG | - | chr4_1:78491708-78491727 | Msa0574760:intron | 20.0% |
| !!! | CAATCTTTCAAAAAGTTTTT+CGG | + | chr4_1:78493659-78493678 | None:intergenic | 20.0% |
| !!! | TTTTGAAGTGAATTTTCATA+TGG | - | chr4_1:78493948-78493967 | Msa0574760:intron | 20.0% |
| !! | AATATTGATAAGAAAACTTC+AGG | + | chr4_1:78494071-78494090 | None:intergenic | 20.0% |
| !!! | AAATTAAACATCATTTTGAC+TGG | - | chr4_1:78494165-78494184 | Msa0574760:intron | 20.0% |
| !! | ACACTGATAAATATCTAAAT+TGG | - | chr4_1:78494416-78494435 | Msa0574760:intron | 20.0% |
| !!! | TAACAAAGTTTATTTCTCTA+GGG | + | chr4_1:78495404-78495423 | None:intergenic | 20.0% |
| !!! | TTAACAAAGTTTATTTCTCT+AGG | + | chr4_1:78495405-78495424 | None:intergenic | 20.0% |
| !! | TTATATTGAATAGATAATCC+GGG | - | chr4_1:78495744-78495763 | Msa0574760:intron | 20.0% |
| !! | CATAAAAAAGCAAAGATAAA+AGG | + | chr4_1:78495925-78495944 | None:intergenic | 20.0% |
| !! | TAAATTATTCAACAACCAAA+TGG | + | chr4_1:78496013-78496032 | None:intergenic | 20.0% |
| ! | ATGATTGTAATAATGAAGTG+TGG | + | chr4_1:78490899-78490918 | None:intergenic | 25.0% |
| ! | GAAGAAAAAAAGCAGAAAAT+TGG | + | chr4_1:78491109-78491128 | None:intergenic | 25.0% |
| !!! | TTTTCTGCTTTTTTTCTTCT+TGG | - | chr4_1:78491110-78491129 | Msa0574760:three_prime_UTR | 25.0% |
| !!! | TTTTTTCATCTCATCTGTTT+TGG | - | chr4_1:78491170-78491189 | Msa0574760:three_prime_UTR | 25.0% |
| ! | AATGAATTTGCATCAATATC+AGG | + | chr4_1:78491261-78491280 | None:intergenic | 25.0% |
| ! | ATTTCTGTAATAAACGTAAC+AGG | - | chr4_1:78491324-78491343 | Msa0574760:intron | 25.0% |
| ! | TTTCTGTAATAAACGTAACA+GGG | - | chr4_1:78491325-78491344 | Msa0574760:intron | 25.0% |
| ! | TTATTTATGCTCACTGTAAT+TGG | - | chr4_1:78491411-78491430 | Msa0574760:intron | 25.0% |
| ! | ATGTTAAACAAAAAAATGGC+GGG | + | chr4_1:78491624-78491643 | None:intergenic | 25.0% |
| !! | GTGACAAATTTTTATTGATC+AGG | - | chr4_1:78492054-78492073 | Msa0574760:intron | 25.0% |
| ! | AATATAAAGGGTCAAAATTG+AGG | - | chr4_1:78492442-78492461 | Msa0574760:CDS | 25.0% |
| ! | AAAAAATGTAAAGATCACGT+GGG | - | chr4_1:78492573-78492592 | Msa0574760:intron | 25.0% |
| !! | TCTCAAATTTTATTGCTTCA+GGG | - | chr4_1:78492857-78492876 | Msa0574760:intron | 25.0% |
| ! | GATGAAGTTTATAATTACTC+AGG | + | chr4_1:78492925-78492944 | None:intergenic | 25.0% |
| ! | AAGATATTATTCTCAAGCAA+AGG | + | chr4_1:78493037-78493056 | None:intergenic | 25.0% |
| ! | GTGCTGAAATAGTTAATATT+TGG | - | chr4_1:78493220-78493239 | Msa0574760:intron | 25.0% |
| ! | GAATATAGTAAATTCGTGTA+AGG | + | chr4_1:78493289-78493308 | None:intergenic | 25.0% |
| !!! | TTTGTATTTTGATCAGAATG+AGG | - | chr4_1:78493825-78493844 | Msa0574760:intron | 25.0% |
| !!! | TTGTATTTTGATCAGAATGA+GGG | - | chr4_1:78493826-78493845 | Msa0574760:intron | 25.0% |
| ! | AGAAAACTTCAGGAAAATAA+GGG | + | chr4_1:78494061-78494080 | None:intergenic | 25.0% |
| ! | AAGAAAACTTCAGGAAAATA+AGG | + | chr4_1:78494062-78494081 | None:intergenic | 25.0% |
| ! | AGTAAGTAAGCAAGTAAAAA+TGG | + | chr4_1:78494356-78494375 | None:intergenic | 25.0% |
| ! | TGATAAATATCTAAATTGGC+AGG | - | chr4_1:78494420-78494439 | Msa0574760:intron | 25.0% |
| ! | TTCTTTCAATATCAAATCCT+GGG | + | chr4_1:78495146-78495165 | None:intergenic | 25.0% |
| ! | ATTCTTTCAATATCAAATCC+TGG | + | chr4_1:78495147-78495166 | None:intergenic | 25.0% |
| ! | TATGGAAATACATAGTTTGA+TGG | + | chr4_1:78495319-78495338 | None:intergenic | 25.0% |
| ! | ATGTATTTCCATATCATGAA+AGG | - | chr4_1:78495326-78495345 | Msa0574760:intron | 25.0% |
| !! | AACAAAGTTTATTTCTCTAG+GGG | + | chr4_1:78495403-78495422 | None:intergenic | 25.0% |
| ! | ACAATTCACGTTAAAATTCA+AGG | + | chr4_1:78495851-78495870 | None:intergenic | 25.0% |
| ! | TCATCCTGAAATTGAAATTA+TGG | - | chr4_1:78495981-78496000 | Msa0574760:five_prime_UTR | 25.0% |
| ! | ACATCCATAATTTCAATTTC+AGG | + | chr4_1:78495988-78496007 | None:intergenic | 25.0% |
| ! | AAATTATGGATGTATCCATT+TGG | - | chr4_1:78495995-78496014 | Msa0574760:five_prime_UTR | 25.0% |
| TTCCGATTCATCATCAAAAT+GGG | - | chr4_1:78491001-78491020 | Msa0574760:three_prime_UTR | 30.0% | |
| !!! | AACCCATTTTGATGATGAAT+CGG | + | chr4_1:78491006-78491025 | None:intergenic | 30.0% |
| GGAAATGAAAATAGAAGTGA+AGG | + | chr4_1:78491064-78491083 | None:intergenic | 30.0% | |
| !!! | GTTTTTTTGAAACCGATCAA+GGG | - | chr4_1:78491225-78491244 | Msa0574760:exon | 30.0% |
| TAACCTACTGTAGAAACTTT+AGG | - | chr4_1:78491512-78491531 | Msa0574760:intron | 30.0% | |
| TGTTAAACAAAAAAATGGCG+GGG | + | chr4_1:78491623-78491642 | None:intergenic | 30.0% | |
| !! | TTATTAGGACCTTTGAAGTA+TGG | - | chr4_1:78491690-78491709 | Msa0574760:intron | 30.0% |
| !! | TATTAGGACCTTTGAAGTAT+GGG | - | chr4_1:78491691-78491710 | Msa0574760:intron | 30.0% |
| ! | TTAAAGTACCCATACTTCAA+AGG | + | chr4_1:78491702-78491721 | None:intergenic | 30.0% |
| CTTAACATGTTGAAGAACAA+GGG | + | chr4_1:78491916-78491935 | None:intergenic | 30.0% | |
| TCTTAACATGTTGAAGAACA+AGG | + | chr4_1:78491917-78491936 | None:intergenic | 30.0% | |
| CCTAAACAGTTAAAAACCAA+GGG | + | chr4_1:78491948-78491967 | None:intergenic | 30.0% | |
| !! | CCTTGGTTTTTAACTGTTTA+GGG | - | chr4_1:78491946-78491965 | Msa0574760:intron | 30.0% |
| ! | AATTTTTATTGATCAGGAGC+AGG | - | chr4_1:78492060-78492079 | Msa0574760:intron | 30.0% |
| ! | GAAATATGTTGTAACTTGCA+TGG | - | chr4_1:78492114-78492133 | Msa0574760:intron | 30.0% |
| AGTTTCTTTCACATTATCCA+AGG | - | chr4_1:78492508-78492527 | Msa0574760:intron | 30.0% | |
| CAAAAAATGTAAAGATCACG+TGG | - | chr4_1:78492572-78492591 | Msa0574760:intron | 30.0% | |
| AAAAATGTAAAGATCACGTG+GGG | - | chr4_1:78492574-78492593 | Msa0574760:intron | 30.0% | |
| ! | CTCTAATAAAGAAGCTGTTT+TGG | + | chr4_1:78492647-78492666 | None:intergenic | 30.0% |
| ACCAAAAACCAATAGAAAGT+GGG | + | chr4_1:78492683-78492702 | None:intergenic | 30.0% | |
| AACCAAAAACCAATAGAAAG+TGG | + | chr4_1:78492684-78492703 | None:intergenic | 30.0% | |
| !!! | ACTTTCTATTGGTTTTTGGT+TGG | - | chr4_1:78492683-78492702 | Msa0574760:CDS | 30.0% |
| CAAAACGAATTTGTACGAAT+TGG | - | chr4_1:78492748-78492767 | Msa0574760:intron | 30.0% | |
| ! | GTCTCAAATTTTATTGCTTC+AGG | - | chr4_1:78492856-78492875 | Msa0574760:intron | 30.0% |
| ! | CTCAAATTTTATTGCTTCAG+GGG | - | chr4_1:78492858-78492877 | Msa0574760:intron | 30.0% |
| !!! | TTGTTGGAAGTGTTTTCTTT+TGG | - | chr4_1:78492885-78492904 | Msa0574760:intron | 30.0% |
| ATAAACTTCATCAAAATGGG+TGG | - | chr4_1:78492933-78492952 | Msa0574760:intron | 30.0% | |
| AAGCAAAGGATACTAAAAAG+AGG | + | chr4_1:78493023-78493042 | None:intergenic | 30.0% | |
| !!! | ATCTAGCCTTGTTTTTTAAG+CGG | + | chr4_1:78493138-78493157 | None:intergenic | 30.0% |
| CTTAAAAAACAAGGCTAGAT+TGG | - | chr4_1:78493138-78493157 | Msa0574760:intron | 30.0% | |
| ACAAATTGCAAATCTACAAG+TGG | + | chr4_1:78493410-78493429 | None:intergenic | 30.0% | |
| TCCTAGGAATTTCAGATTAT+TGG | - | chr4_1:78493478-78493497 | Msa0574760:intron | 30.0% | |
| ! | TCCAATAATCTGAAATTCCT+AGG | + | chr4_1:78493482-78493501 | None:intergenic | 30.0% |
| ATGATATATTCATGCAGTCA+TGG | - | chr4_1:78493567-78493586 | Msa0574760:intron | 30.0% | |
| AAAAGAATAGAACTTACACC+CGG | + | chr4_1:78493614-78493633 | None:intergenic | 30.0% | |
| !!! | TCTCTATTTTTGCCCTATTT+TGG | - | chr4_1:78493727-78493746 | Msa0574760:intron | 30.0% |
| GTGAATTGTTGACCAAAATA+GGG | + | chr4_1:78493742-78493761 | None:intergenic | 30.0% | |
| TGTGAATTGTTGACCAAAAT+AGG | + | chr4_1:78493743-78493762 | None:intergenic | 30.0% | |
| !!! | TGTATTTTGATCAGAATGAG+GGG | - | chr4_1:78493827-78493846 | Msa0574760:intron | 30.0% |
| ! | TTGGGTTTAATGTTTTGCTT+TGG | - | chr4_1:78493865-78493884 | Msa0574760:intron | 30.0% |
| !!! | CTTTTTAGCTTCTTCAAAAG+TGG | - | chr4_1:78493920-78493939 | Msa0574760:intron | 30.0% |
| ! | CATGTTAGCTTCAAATAACA+AGG | + | chr4_1:78493976-78493995 | None:intergenic | 30.0% |
| TTATATCAGACTGTTCATGA+AGG | - | chr4_1:78494211-78494230 | Msa0574760:intron | 30.0% | |
| !!! | CATAAGTTCTGTGTTTTTTC+TGG | - | chr4_1:78494649-78494668 | Msa0574760:intron | 30.0% |
| TTCTTCTTATAGTGACTGTA+TGG | - | chr4_1:78494683-78494702 | Msa0574760:intron | 30.0% | |
| ! | CTTGGTTGTTGTTGTATATT+AGG | - | chr4_1:78494804-78494823 | Msa0574760:intron | 30.0% |
| !!! | TCGAATAGCTTTTAACTTCT+CGG | - | chr4_1:78495019-78495038 | Msa0574760:intron | 30.0% |
| TTGAGAGTGAAACTTTATGA+TGG | - | chr4_1:78495048-78495067 | Msa0574760:intron | 30.0% | |
| AGTGCATTTGTTTCAATACA+TGG | - | chr4_1:78495095-78495114 | Msa0574760:intron | 30.0% | |
| TGGTAATTCCTTTCATGATA+TGG | + | chr4_1:78495337-78495356 | None:intergenic | 30.0% | |
| ACTACCATTCAATGATATGT+CGG | + | chr4_1:78495445-78495464 | None:intergenic | 30.0% | |
| CTGACTAAGTTATAAGCTTA+TGG | - | chr4_1:78495519-78495538 | Msa0574760:intron | 30.0% | |
| TTATGGTGACATAACTTTGT+TGG | - | chr4_1:78495536-78495555 | Msa0574760:intron | 30.0% | |
| TCACGTTAAAATTCAAGGAT+AGG | + | chr4_1:78495846-78495865 | None:intergenic | 30.0% | |
| GAAAGAGATAAAGACGAAGA+AGG | + | chr4_1:78490931-78490950 | None:intergenic | 35.0% | |
| AATAGTAGAGAGAGAAAAGC+AGG | + | chr4_1:78490966-78490985 | None:intergenic | 35.0% | |
| CTTCCGATTCATCATCAAAA+TGG | - | chr4_1:78491000-78491019 | Msa0574760:three_prime_UTR | 35.0% | |
| ! | ATCATCAAAATGGGTTCTGA+AGG | - | chr4_1:78491010-78491029 | Msa0574760:three_prime_UTR | 35.0% |
| ! | GAAAATAGAAGTGAAGGTGT+TGG | + | chr4_1:78491058-78491077 | None:intergenic | 35.0% |
| !!! | TCTGCTTTTTTTCTTCTTGG+TGG | - | chr4_1:78491113-78491132 | Msa0574760:three_prime_UTR | 35.0% |
| !!! | CGTTTTTTTGAAACCGATCA+AGG | - | chr4_1:78491224-78491243 | Msa0574760:exon | 35.0% |
| TACAAGCTCATCCATTTATC+TGG | - | chr4_1:78491660-78491679 | Msa0574760:intron | 35.0% | |
| ACAAGCTCATCCATTTATCT+GGG | - | chr4_1:78491661-78491680 | Msa0574760:intron | 35.0% | |
| CTTTAGTCAATCAACAATCG+CGG | - | chr4_1:78491739-78491758 | Msa0574760:intron | 35.0% | |
| GGTAGAGAATATCTATGTTG+CGG | - | chr4_1:78491813-78491832 | Msa0574760:intron | 35.0% | |
| TGTTAAGACAAAAATGCCCT+TGG | - | chr4_1:78491929-78491948 | Msa0574760:intron | 35.0% | |
| !! | CCCTTGGTTTTTAACTGTTT+AGG | - | chr4_1:78491945-78491964 | Msa0574760:intron | 35.0% |
| CCCTAAACAGTTAAAAACCA+AGG | + | chr4_1:78491949-78491968 | None:intergenic | 35.0% | |
| TTCGCTATCTAGCAAGAATT+CGG | - | chr4_1:78492234-78492253 | Msa0574760:intron | 35.0% | |
| ACGTATAATACGAACTCAAG+CGG | + | chr4_1:78492286-78492305 | None:intergenic | 35.0% | |
| AAAATGTAAAGATCACGTGG+GGG | - | chr4_1:78492575-78492594 | Msa0574760:intron | 35.0% | |
| ! | ATGAAGGTTCTCTGATGTTT+TGG | + | chr4_1:78492620-78492639 | None:intergenic | 35.0% |
| !!! | AAGCTGTTTTGGAAAGATGA+AGG | + | chr4_1:78492636-78492655 | None:intergenic | 35.0% |
| !! | GTTTTGTAGTTCTCTGAAAG+TGG | + | chr4_1:78492734-78492753 | None:intergenic | 35.0% |
| ! | GTTTTCTTTTGGATCCTCAT+TGG | - | chr4_1:78492896-78492915 | Msa0574760:intron | 35.0% |
| AATTACTCAGGTTACCAATG+AGG | + | chr4_1:78492913-78492932 | None:intergenic | 35.0% | |
| TAGTTCCTGAGAGTTCTTTA+TGG | - | chr4_1:78492988-78493007 | Msa0574760:intron | 35.0% | |
| AGTTCCTGAGAGTTCTTTAT+GGG | - | chr4_1:78492989-78493008 | Msa0574760:intron | 35.0% | |
| GTGATCTAAATCATGAAAGC+TGG | - | chr4_1:78493108-78493127 | Msa0574760:intron | 35.0% | |
| AGAAGTTATTGGTCCAATTC+AGG | + | chr4_1:78493174-78493193 | None:intergenic | 35.0% | |
| TGAATTGGACCAATAACTTC+TGG | - | chr4_1:78493173-78493192 | Msa0574760:intron | 35.0% | |
| AACAGGATTCCAGAAGTTAT+TGG | + | chr4_1:78493185-78493204 | None:intergenic | 35.0% | |
| !! | AATAACTTCTGGAATCCTGT+TGG | - | chr4_1:78493184-78493203 | Msa0574760:intron | 35.0% |
| !! | ATAACTTCTGGAATCCTGTT+GGG | - | chr4_1:78493185-78493204 | Msa0574760:intron | 35.0% |
| AAAGAATAGAACTTACACCC+GGG | + | chr4_1:78493613-78493632 | None:intergenic | 35.0% | |
| ! | ATATCCAGCATAAGTTGACA+AGG | + | chr4_1:78493770-78493789 | None:intergenic | 35.0% |
| !! | TTCTGTGCATGGCTTTAATT+GGG | + | chr4_1:78494101-78494120 | None:intergenic | 35.0% |
| !! | ATTCTGTGCATGGCTTTAAT+TGG | + | chr4_1:78494102-78494121 | None:intergenic | 35.0% |
| !! | TACCAGTTGAAGTTGTTTTG+TGG | - | chr4_1:78494241-78494260 | Msa0574760:intron | 35.0% |
| ! | CTTGTCTGAAATCTAACAGA+TGG | + | chr4_1:78494289-78494308 | None:intergenic | 35.0% |
| CATCTGTTAGATTTCAGACA+AGG | - | chr4_1:78494287-78494306 | Msa0574760:intron | 35.0% | |
| TTGGAAAAGAGAGTCTACAA+TGG | - | chr4_1:78494474-78494493 | Msa0574760:intron | 35.0% | |
| GTTGTATATTAGGTAACCAC+TGG | - | chr4_1:78494814-78494833 | Msa0574760:intron | 35.0% | |
| ! | TAACCACTGGTTGTCTAATA+TGG | - | chr4_1:78494827-78494846 | Msa0574760:intron | 35.0% |
| TGTGAAATTACTGCATCAGT+TGG | - | chr4_1:78494869-78494888 | Msa0574760:intron | 35.0% | |
| CATTAATTGTCAACCTACTC+TGG | - | chr4_1:78494905-78494924 | Msa0574760:intron | 35.0% | |
| TACATTTGTATCTCCAGAGT+AGG | + | chr4_1:78494921-78494940 | None:intergenic | 35.0% | |
| TTGAGAGTGATACTTTCTGA+TGG | + | chr4_1:78494970-78494989 | None:intergenic | 35.0% | |
| !!! | GCATTTGTTTTGATATTCCC+AGG | - | chr4_1:78495126-78495145 | Msa0574760:intron | 35.0% |
| TGGTGCGAAGATAATTTCTT+TGG | + | chr4_1:78495296-78495315 | None:intergenic | 35.0% | |
| GGAAATACATAGTTTGATGG+TGG | + | chr4_1:78495316-78495335 | None:intergenic | 35.0% | |
| GGAATTACCAAAATGTGTAG+CGG | - | chr4_1:78495347-78495366 | Msa0574760:intron | 35.0% | |
| CATAACTTTGTTGGAGGAAA+TGG | - | chr4_1:78495545-78495564 | Msa0574760:intron | 35.0% | |
| AGTGATCATACATGACTTTC+AGG | - | chr4_1:78495628-78495647 | Msa0574760:intron | 35.0% | |
| GATGTTGTATCGTGTAATTC+AGG | - | chr4_1:78495692-78495711 | Msa0574760:intron | 35.0% | |
| AATAGATAATCCGGGTTCAT+GGG | - | chr4_1:78495752-78495771 | Msa0574760:intron | 35.0% | |
| ATGATGAATCGGAAGAGCTA+GGG | + | chr4_1:78490995-78491014 | None:intergenic | 40.0% | |
| TGTTGGAGAATTACCAACGA+CGG | + | chr4_1:78491041-78491060 | None:intergenic | 40.0% | |
| GGTTCAAACAAACCCTTGAT+CGG | + | chr4_1:78491240-78491259 | None:intergenic | 40.0% | |
| CTGCCTAAAGTTTCTACAGT+AGG | + | chr4_1:78491518-78491537 | None:intergenic | 40.0% | |
| TTAAGGAGTGGAGTGATAAG+GGG | + | chr4_1:78491574-78491593 | None:intergenic | 40.0% | |
| GTTAAGGAGTGGAGTGATAA+GGG | + | chr4_1:78491575-78491594 | None:intergenic | 40.0% | |
| AGTTAAGGAGTGGAGTGATA+AGG | + | chr4_1:78491576-78491595 | None:intergenic | 40.0% | |
| ATAACCACAGCCCAGATAAA+TGG | + | chr4_1:78491674-78491693 | None:intergenic | 40.0% | |
| TTATCTGGGCTGTGGTTATT+AGG | - | chr4_1:78491675-78491694 | Msa0574760:intron | 40.0% | |
| ACATTGTAGACGAGCAGAAA+AGG | - | chr4_1:78491882-78491901 | Msa0574760:intron | 40.0% | |
| AATTCCTAAAGCAGTGTAGC+GGG | + | chr4_1:78492034-78492053 | None:intergenic | 40.0% | |
| CAATTCCTAAAGCAGTGTAG+CGG | + | chr4_1:78492035-78492054 | None:intergenic | 40.0% | |
| ! | GATCAGGAGCAGGAAATTTT+AGG | - | chr4_1:78492070-78492089 | Msa0574760:intron | 40.0% |
| AACTATGCACCAGATTCTCA+GGG | + | chr4_1:78492165-78492184 | None:intergenic | 40.0% | |
| TAACTATGCACCAGATTCTC+AGG | + | chr4_1:78492166-78492185 | None:intergenic | 40.0% | |
| TTACCAGATTCGCAATTCGT+TGG | - | chr4_1:78492183-78492202 | Msa0574760:intron | 40.0% | |
| TACCAGATTCGCAATTCGTT+GGG | - | chr4_1:78492184-78492203 | Msa0574760:intron | 40.0% | |
| CGTGAAAGGATATACAGAGT+CGG | - | chr4_1:78492259-78492278 | Msa0574760:intron | 40.0% | |
| ! | TGATGCACGTGATTTTACCT+TGG | + | chr4_1:78492528-78492547 | None:intergenic | 40.0% |
| !!! | GCCCACTTTCTATTGGTTTT+TGG | - | chr4_1:78492679-78492698 | Msa0574760:CDS | 40.0% |
| !! | AATTGGTTCGCGGTTTGTAT+GGG | - | chr4_1:78492802-78492821 | Msa0574760:intron | 40.0% |
| CGAATTGTGTGACTATGATC+TGG | - | chr4_1:78492832-78492851 | Msa0574760:intron | 40.0% | |
| TTGCTTCAGGGGTTATTTGT+TGG | - | chr4_1:78492869-78492888 | Msa0574760:intron | 40.0% | |
| GTTCCTGAGAGTTCTTTATG+GGG | - | chr4_1:78492990-78493009 | Msa0574760:intron | 40.0% | |
| TTCCTGAGAGTTCTTTATGG+GGG | - | chr4_1:78492991-78493010 | Msa0574760:intron | 40.0% | |
| CTTCTGTTGTGTACCAAACT+TGG | - | chr4_1:78493054-78493073 | Msa0574760:intron | 40.0% | |
| TACTTGTGAGTTGCCAAGTT+TGG | + | chr4_1:78493070-78493089 | None:intergenic | 40.0% | |
| ACTTGGCAACTCACAAGTAT+TGG | - | chr4_1:78493071-78493090 | Msa0574760:intron | 40.0% | |
| GGCAAACCGCTTAAAAAACA+AGG | - | chr4_1:78493129-78493148 | Msa0574760:intron | 40.0% | |
| TGGTTACTCTTGACCTGAAT+TGG | - | chr4_1:78493158-78493177 | Msa0574760:intron | 40.0% | |
| !! | TAACTTCTGGAATCCTGTTG+GGG | - | chr4_1:78493186-78493205 | Msa0574760:intron | 40.0% |
| TGTAAGGAAATGCACACTCT+TGG | + | chr4_1:78493273-78493292 | None:intergenic | 40.0% | |
| TGTCTATCAATGCAGTTCCT+AGG | - | chr4_1:78493462-78493481 | Msa0574760:intron | 40.0% | |
| ATATTCATGCAGTCATGGAC+TGG | - | chr4_1:78493572-78493591 | Msa0574760:intron | 40.0% | |
| TATTCATGCAGTCATGGACT+GGG | - | chr4_1:78493573-78493592 | Msa0574760:intron | 40.0% | |
| !! | TCATGGACTGGGACTATTAT+TGG | - | chr4_1:78493584-78493603 | Msa0574760:intron | 40.0% |
| AAGAATAGAACTTACACCCG+GGG | + | chr4_1:78493612-78493631 | None:intergenic | 40.0% | |
| AGGGCAAAAATAGAGAACTG+TGG | + | chr4_1:78493723-78493742 | None:intergenic | 40.0% | |
| TCATCCTTGTCAACTTATGC+TGG | - | chr4_1:78493763-78493782 | Msa0574760:intron | 40.0% | |
| !!! | GTTTTGCTTTGGAAACCAAG+TGG | - | chr4_1:78493876-78493895 | Msa0574760:intron | 40.0% |
| ! | CTTTGGAAACCAAGTGGTTA+TGG | - | chr4_1:78493882-78493901 | Msa0574760:intron | 40.0% |
| ACACACTATCCATAACCACT+TGG | + | chr4_1:78493894-78493913 | None:intergenic | 40.0% | |
| CTTCAGGAAAATAAGGGTCT+AGG | + | chr4_1:78494055-78494074 | None:intergenic | 40.0% | |
| !! | TCTGTGCATGGCTTTAATTG+GGG | + | chr4_1:78494100-78494119 | None:intergenic | 40.0% |
| ! | TGTGCTGATCTCTAGTTGTT+AGG | - | chr4_1:78494125-78494144 | Msa0574760:intron | 40.0% |
| TGCCACAAAACAACTTCAAC+TGG | + | chr4_1:78494246-78494265 | None:intergenic | 40.0% | |
| !! | GTTGAAGTTGTTTTGTGGCA+AGG | - | chr4_1:78494246-78494265 | Msa0574760:intron | 40.0% |
| ! | GTCTGAAATCTAACAGATGG+TGG | + | chr4_1:78494286-78494305 | None:intergenic | 40.0% |
| TAACTACCACTCCAGATTCT+TGG | + | chr4_1:78494333-78494352 | None:intergenic | 40.0% | |
| GCAAGCATGGGAAACAAATT+TGG | + | chr4_1:78494451-78494470 | None:intergenic | 40.0% | |
| ! | CTTTTCCAACTAGCAAGCAT+GGG | + | chr4_1:78494463-78494482 | None:intergenic | 40.0% |
| ! | TCTTTTCCAACTAGCAAGCA+TGG | + | chr4_1:78494464-78494483 | None:intergenic | 40.0% |
| AAATGATGTCCCCACAAAAC+CGG | - | chr4_1:78494524-78494543 | Msa0574760:intron | 40.0% | |
| GATAAGAATGACACACCTTC+AGG | + | chr4_1:78494565-78494584 | None:intergenic | 40.0% | |
| TCCATTGTAGCAGTTGCTAT+AGG | - | chr4_1:78494626-78494645 | Msa0574760:intron | 40.0% | |
| TTCATCACTGTCCAGATTTG+TGG | - | chr4_1:78494742-78494761 | Msa0574760:intron | 40.0% | |
| ACACCATATTAGACAACCAG+TGG | + | chr4_1:78494833-78494852 | None:intergenic | 40.0% | |
| CTGGTTGTCTAATATGGTGT+TGG | - | chr4_1:78494833-78494852 | Msa0574760:intron | 40.0% | |
| TACTGCATCAGTTGGTTAAG+TGG | - | chr4_1:78494877-78494896 | Msa0574760:intron | 40.0% | |
| TCTAGGGGTTAAACTGTGTT+TGG | + | chr4_1:78495388-78495407 | None:intergenic | 40.0% | |
| ! | TGTGCCGACATATCATTGAA+TGG | - | chr4_1:78495438-78495457 | Msa0574760:intron | 40.0% |
| GCTTATAACTTAGTCAGCAC+AGG | + | chr4_1:78495516-78495535 | None:intergenic | 40.0% | |
| TGGTGACATAACTTTGTTGG+AGG | - | chr4_1:78495539-78495558 | Msa0574760:intron | 40.0% | |
| !! | GAAATGGTGCACTGGTTATT+AGG | - | chr4_1:78495561-78495580 | Msa0574760:intron | 40.0% |
| TGACTTTCAGGCAATGAAGA+TGG | - | chr4_1:78495640-78495659 | Msa0574760:intron | 40.0% | |
| TTTCAGGCAATGAAGATGGA+AGG | - | chr4_1:78495644-78495663 | Msa0574760:intron | 40.0% | |
| AGATGGAAGGATTGACCAAA+AGG | - | chr4_1:78495657-78495676 | Msa0574760:intron | 40.0% | |
| GATGGAAGGATTGACCAAAA+GGG | - | chr4_1:78495658-78495677 | Msa0574760:intron | 40.0% | |
| ATGGAAGGATTGACCAAAAG+GGG | - | chr4_1:78495659-78495678 | Msa0574760:intron | 40.0% | |
| GAATAGATAATCCGGGTTCA+TGG | - | chr4_1:78495751-78495770 | Msa0574760:intron | 40.0% | |
| AATGCATTAACCCATGAACC+CGG | + | chr4_1:78495765-78495784 | None:intergenic | 40.0% | |
| ! | AGTCACTCTTTGATTTCTCC+AGG | + | chr4_1:78495821-78495840 | None:intergenic | 40.0% |
| CTTGAAACTGCTCTTTACTG+CGG | - | chr4_1:78495878-78495897 | Msa0574760:intron | 40.0% | |
| CTTTACTGCGGACTCTAATT+TGG | - | chr4_1:78495890-78495909 | Msa0574760:intron | 40.0% | |
| GTAGAGAGAGAAAAGCAGGT+AGG | + | chr4_1:78490962-78490981 | None:intergenic | 45.0% | |
| ! | AATCGGAAGAGCTAGGGTTT+TGG | + | chr4_1:78490989-78491008 | None:intergenic | 45.0% |
| GATGATGAATCGGAAGAGCT+AGG | + | chr4_1:78490996-78491015 | None:intergenic | 45.0% | |
| GTGGTTGCTTGCTTGTGTAT+AGG | - | chr4_1:78491132-78491151 | Msa0574760:three_prime_UTR | 45.0% | |
| CTACAGTAGGTTAACTGAGC+AGG | + | chr4_1:78491505-78491524 | None:intergenic | 45.0% | |
| ! | AAATGGCGGGGATATAACGT+TGG | + | chr4_1:78491611-78491630 | None:intergenic | 45.0% |
| TCATCCATTTATCTGGGCTG+TGG | - | chr4_1:78491667-78491686 | Msa0574760:intron | 45.0% | |
| TAGTCAATCAACAATCGCGG+TGG | - | chr4_1:78491742-78491761 | Msa0574760:intron | 45.0% | |
| !! | CACGTTGTTTTACATAGCGC+TGG | + | chr4_1:78491787-78491806 | None:intergenic | 45.0% |
| CAGCGCTATGTAAAACAACG+TGG | - | chr4_1:78491785-78491804 | Msa0574760:intron | 45.0% | |
| CGCTATGTAAAACAACGTGG+TGG | - | chr4_1:78491788-78491807 | Msa0574760:intron | 45.0% | |
| ATGTAAAACAACGTGGTGGC+TGG | - | chr4_1:78491792-78491811 | Msa0574760:intron | 45.0% | |
| ! | CAGGAGCAGGAAATTTTAGG+CGG | - | chr4_1:78492073-78492092 | Msa0574760:intron | 45.0% |
| ! | AGGAGCAGGAAATTTTAGGC+GGG | - | chr4_1:78492074-78492093 | Msa0574760:intron | 45.0% |
| ! | GTTGTAACTTGCATGGTGTG+TGG | - | chr4_1:78492121-78492140 | Msa0574760:intron | 45.0% |
| ! | TAACTTGCATGGTGTGTGGA+GGG | - | chr4_1:78492125-78492144 | Msa0574760:intron | 45.0% |
| TACCCAACGAATTGCGAATC+TGG | + | chr4_1:78492189-78492208 | None:intergenic | 45.0% | |
| GCAAGAATTCGGTACGTGAA+AGG | - | chr4_1:78492245-78492264 | Msa0574760:intron | 45.0% | |
| ATAGAAAGTGGGCGATGAAG+CGG | + | chr4_1:78492672-78492691 | None:intergenic | 45.0% | |
| CTTCATCGCCCACTTTCTAT+TGG | - | chr4_1:78492672-78492691 | Msa0574760:CDS | 45.0% | |
| !! | GAATTGGTTCGCGGTTTGTA+TGG | - | chr4_1:78492801-78492820 | Msa0574760:intron | 45.0% |
| !! | ATTGGTTCGCGGTTTGTATG+GGG | - | chr4_1:78492803-78492822 | Msa0574760:intron | 45.0% |
| TGGGTGGTATGTCATTCTTG+AGG | - | chr4_1:78492949-78492968 | Msa0574760:intron | 45.0% | |
| TCCTGTTGGGGCTATAACTT+TGG | - | chr4_1:78493198-78493217 | Msa0574760:intron | 45.0% | |
| ACCAAAGTTATAGCCCCAAC+AGG | + | chr4_1:78493202-78493221 | None:intergenic | 45.0% | |
| AGGAAATGCACACTCTTGGA+CGG | + | chr4_1:78493269-78493288 | None:intergenic | 45.0% | |
| TTATTGGAAGAGCTTGAGCG+AGG | - | chr4_1:78493494-78493513 | Msa0574760:intron | 45.0% | |
| GAGACGGAACTGTTAGCTAT+GGG | - | chr4_1:78493531-78493550 | Msa0574760:intron | 45.0% | |
| AGAATAGAACTTACACCCGG+GGG | + | chr4_1:78493611-78493630 | None:intergenic | 45.0% | |
| CAGCACATGAATTCTGTGCA+TGG | + | chr4_1:78494112-78494131 | None:intergenic | 45.0% | |
| !! | CTAACAGATGGTGGATTGTC+TGG | + | chr4_1:78494277-78494296 | None:intergenic | 45.0% |
| ACTTGCGTCAACCAAGAATC+TGG | - | chr4_1:78494319-78494338 | Msa0574760:intron | 45.0% | |
| ! | TGTTTCCCATGCTTGCTAGT+TGG | - | chr4_1:78494455-78494474 | Msa0574760:intron | 45.0% |
| !! | AGATAGCTTCCGGTTTTGTG+GGG | + | chr4_1:78494536-78494555 | None:intergenic | 45.0% |
| !! | GAGATAGCTTCCGGTTTTGT+GGG | + | chr4_1:78494537-78494556 | None:intergenic | 45.0% |
| ! | TGAGATAGCTTCCGGTTTTG+TGG | + | chr4_1:78494538-78494557 | None:intergenic | 45.0% |
| AAGAATGACACACCTTCAGG+AGG | + | chr4_1:78494562-78494581 | None:intergenic | 45.0% | |
| GCCTATAGCAACTGCTACAA+TGG | + | chr4_1:78494630-78494649 | None:intergenic | 45.0% | |
| ACCAACCTCACTTCACTTAG+TGG | - | chr4_1:78494774-78494793 | Msa0574760:intron | 45.0% | |
| CCAACCTCACTTCACTTAGT+GGG | - | chr4_1:78494775-78494794 | Msa0574760:intron | 45.0% | |
| GTATCCCACTAAGTGAAGTG+AGG | + | chr4_1:78494782-78494801 | None:intergenic | 45.0% | |
| TCACTTAGTGGGATACAGCT+TGG | - | chr4_1:78494786-78494805 | Msa0574760:intron | 45.0% | |
| ! | TAGCTCACCGCTACACATTT+TGG | + | chr4_1:78495357-78495376 | None:intergenic | 45.0% |
| AAAATGTGTAGCGGTGAGCT+AGG | - | chr4_1:78495356-78495375 | Msa0574760:intron | 45.0% | |
| AAATGTGTAGCGGTGAGCTA+GGG | - | chr4_1:78495357-78495376 | Msa0574760:intron | 45.0% | |
| TGACCATTGCGTTTGTAACC+TGG | - | chr4_1:78495800-78495819 | Msa0574760:intron | 45.0% | |
| TCTCCAGGTTACAAACGCAA+TGG | + | chr4_1:78495806-78495825 | None:intergenic | 45.0% | |
| !!! | TTATTTTGTTATAAAAAATT+TGG | + | chr4_1:78492414-78492433 | None:intergenic | 5.0% |
| GAGAGAGAAAAGCAGGTAGG+TGG | + | chr4_1:78490959-78490978 | None:intergenic | 50.0% | |
| TGGAGAATTACCAACGACGG+TGG | + | chr4_1:78491038-78491057 | None:intergenic | 50.0% | |
| TTAGGCAGCATGCTCTTGTG+TGG | - | chr4_1:78491530-78491549 | Msa0574760:intron | 50.0% | |
| GAGTGATAAGGGGTGATCTC+GGG | + | chr4_1:78491564-78491583 | None:intergenic | 50.0% | |
| GGAGTGATAAGGGGTGATCT+CGG | + | chr4_1:78491565-78491584 | None:intergenic | 50.0% | |
| GATATAACGTTGGCCAGGGT+GGG | + | chr4_1:78491601-78491620 | None:intergenic | 50.0% | |
| TTGAACCTTCTGTGCGACTC+CGG | - | chr4_1:78491976-78491995 | Msa0574760:intron | 50.0% | |
| GGAGAAAGTCGCAATGCAGT+GGG | + | chr4_1:78492013-78492032 | None:intergenic | 50.0% | |
| TTCTCCCGCTACACTGCTTT+AGG | - | chr4_1:78492027-78492046 | Msa0574760:intron | 50.0% | |
| ! | GGAGCAGGAAATTTTAGGCG+GGG | - | chr4_1:78492075-78492094 | Msa0574760:intron | 50.0% |
| ! | GTAACTTGCATGGTGTGTGG+AGG | - | chr4_1:78492124-78492143 | Msa0574760:intron | 50.0% |
| AACTTGCATGGTGTGTGGAG+GGG | - | chr4_1:78492126-78492145 | Msa0574760:intron | 50.0% | |
| TATGCACCAGATTCTCAGGG+TGG | + | chr4_1:78492162-78492181 | None:intergenic | 50.0% | |
| TTCGCAATTCGTTGGGTACG+CGG | - | chr4_1:78492191-78492210 | Msa0574760:intron | 50.0% | |
| AATTCGTTGGGTACGCGGTA+CGG | - | chr4_1:78492196-78492215 | Msa0574760:intron | 50.0% | |
| GGCTGCTTCCATCTTCAACA+CGG | - | chr4_1:78492704-78492723 | Msa0574760:intron | 50.0% | |
| !! | AATTCGCGCGTACTGATTCG+CGG | + | chr4_1:78492786-78492805 | None:intergenic | 50.0% |
| TGCCCCCATAAAGAACTCTC+AGG | + | chr4_1:78492996-78493015 | None:intergenic | 50.0% | |
| GGTGAGAAGGGAATTGGAGA+CGG | - | chr4_1:78493515-78493534 | Msa0574760:intron | 50.0% | |
| GGAGACGGAACTGTTAGCTA+TGG | - | chr4_1:78493530-78493549 | Msa0574760:intron | 50.0% | |
| CGGAACTGTTAGCTATGGGA+TGG | - | chr4_1:78493535-78493554 | Msa0574760:intron | 50.0% | |
| GAATAGAACTTACACCCGGG+GGG | + | chr4_1:78493610-78493629 | None:intergenic | 50.0% | |
| CGTCAACCAAGAATCTGGAG+TGG | - | chr4_1:78494324-78494343 | Msa0574760:intron | 50.0% | |
| AAGCTATCTCAGCCTCCTGA+AGG | - | chr4_1:78494547-78494566 | Msa0574760:intron | 50.0% | |
| CTGTCCAGATTTGTGGACAG+TGG | - | chr4_1:78494749-78494768 | Msa0574760:intron | 50.0% | |
| GTGTCCACTGTCCACAAATC+TGG | + | chr4_1:78494756-78494775 | None:intergenic | 50.0% | |
| CCCACTAAGTGAAGTGAGGT+TGG | + | chr4_1:78494778-78494797 | None:intergenic | 50.0% | |
| AATGTGTAGCGGTGAGCTAG+GGG | - | chr4_1:78495358-78495377 | Msa0574760:intron | 50.0% | |
| TGTTGGAGGAAATGGTGCAC+TGG | - | chr4_1:78495553-78495572 | Msa0574760:intron | 50.0% | |
| AAGGATTGACCAAAAGGGGC+TGG | - | chr4_1:78495663-78495682 | Msa0574760:intron | 50.0% | |
| TGCGGACTCTAATTTGGCAG+TGG | - | chr4_1:78495896-78495915 | Msa0574760:CDS | 50.0% | |
| GCGGACTCTAATTTGGCAGT+GGG | - | chr4_1:78495897-78495916 | Msa0574760:CDS | 50.0% | |
| TCTGAAGGATCCACCGTCGT+TGG | - | chr4_1:78491025-78491044 | Msa0574760:three_prime_UTR | 55.0% | |
| AGGGTGGGAGAGTTAAGGAG+TGG | + | chr4_1:78491586-78491605 | None:intergenic | 55.0% | |
| ACTCCTTAACTCTCCCACCC+TGG | - | chr4_1:78491585-78491604 | Msa0574760:intron | 55.0% | |
| GGATATAACGTTGGCCAGGG+TGG | + | chr4_1:78491602-78491621 | None:intergenic | 55.0% | |
| CGGGGATATAACGTTGGCCA+GGG | + | chr4_1:78491605-78491624 | None:intergenic | 55.0% | |
| GCGGTGGTACGTGATGTAGT+GGG | - | chr4_1:78491758-78491777 | Msa0574760:intron | 55.0% | |
| CGGTGGTACGTGATGTAGTG+GGG | - | chr4_1:78491759-78491778 | Msa0574760:intron | 55.0% | |
| GGGAGAAAGTCGCAATGCAG+TGG | + | chr4_1:78492014-78492033 | None:intergenic | 55.0% | |
| ACTTGCATGGTGTGTGGAGG+GGG | - | chr4_1:78492127-78492146 | Msa0574760:intron | 55.0% | |
| ! | GTGTGTGGAGGGGGTTGATT+CGG | - | chr4_1:78492136-78492155 | Msa0574760:intron | 55.0% |
| ATTCGGCCACCCTGAGAATC+TGG | - | chr4_1:78492153-78492172 | Msa0574760:intron | 55.0% | |
| ATTCGTTGGGTACGCGGTAC+GGG | - | chr4_1:78492197-78492216 | Msa0574760:intron | 55.0% | |
| GTGGCGAACCGTGTTGAAGA+TGG | + | chr4_1:78492715-78492734 | None:intergenic | 55.0% | |
| GCGAATCAGTACGCGCGAAT+TGG | - | chr4_1:78492785-78492804 | Msa0574760:intron | 55.0% | |
| !! | AGTACGCGCGAATTGGTTCG+CGG | - | chr4_1:78492792-78492811 | Msa0574760:intron | 55.0% |
| AGAGCTTGAGCGAGGTGAGA+AGG | - | chr4_1:78493502-78493521 | Msa0574760:intron | 55.0% | |
| GAGCTTGAGCGAGGTGAGAA+GGG | - | chr4_1:78493503-78493522 | Msa0574760:intron | 55.0% | |
| GAGCGAGGTGAGAAGGGAAT+TGG | - | chr4_1:78493509-78493528 | Msa0574760:intron | 55.0% | |
| TGGGACTATTATTGGCCCCC+CGG | - | chr4_1:78493592-78493611 | Msa0574760:intron | 55.0% | |
| GGGTGTGCGCTGTGTGTATT+GGG | - | chr4_1:78493847-78493866 | Msa0574760:intron | 55.0% | |
| CAGGAGGCTGAGATAGCTTC+CGG | + | chr4_1:78494546-78494565 | None:intergenic | 55.0% | |
| ! | ATCTCAGCACCAGCCCCTTT+TGG | + | chr4_1:78495675-78495694 | None:intergenic | 55.0% |
| TGGCCAGGGTGGGAGAGTTA+AGG | + | chr4_1:78491591-78491610 | None:intergenic | 60.0% | |
| GCGGGGATATAACGTTGGCC+AGG | + | chr4_1:78491606-78491625 | None:intergenic | 60.0% | |
| CGCGGTGGTACGTGATGTAG+TGG | - | chr4_1:78491757-78491776 | Msa0574760:intron | 60.0% | |
| GTCGCAATGCAGTGGGTACC+AGG | + | chr4_1:78492006-78492025 | None:intergenic | 60.0% | |
| GGGACTATTATTGGCCCCCC+GGG | - | chr4_1:78493593-78493612 | Msa0574760:intron | 60.0% | |
| GGGGTGTGCGCTGTGTGTAT+TGG | - | chr4_1:78493846-78493865 | Msa0574760:intron | 60.0% | |
| TGCGGCCGTAGCACTGTGTG+TGG | - | chr4_1:78491831-78491850 | Msa0574760:intron | 65.0% | |
| GGCCGTAGCACTGTGTGTGG+CGG | - | chr4_1:78491834-78491853 | Msa0574760:intron | 65.0% | |
| CGCCGCCACACACAGTGCTA+CGG | + | chr4_1:78491839-78491858 | None:intergenic | 65.0% | |
| GCTTGCCGGAGTCGCACAGA+AGG | + | chr4_1:78491984-78492003 | None:intergenic | 65.0% | |
| GCAGTGGGTACCAGGCTTGC+CGG | + | chr4_1:78491998-78492017 | None:intergenic | 65.0% | |
| CTGTGCGACTCCGGCAAGCC+TGG | - | chr4_1:78491985-78492004 | Msa0574760:intron | 70.0% | |
| GGGTACGCGGTACGGGTACG+TGG | - | chr4_1:78492204-78492223 | Msa0574760:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 78490882 | 78496055 | 78490882 | ID=Msa0574760;Name=Msa0574760 |
| chr4_1 | mRNA | 78490882 | 78496055 | 78490882 | ID=Msa0574760-mRNA-1;Parent=Msa0574760;Name=Msa0574760-mRNA-1;_AED=0.11;_eAED=0.11;_QI=137|1|1|1|0.75|0.8|5|347|159 |
| chr4_1 | exon | 78490882 | 78491287 | 78490882 | ID=Msa0574760-mRNA-1:exon:27864;Parent=Msa0574760-mRNA-1 |
| chr4_1 | exon | 78492369 | 78492495 | 78492369 | ID=Msa0574760-mRNA-1:exon:27863;Parent=Msa0574760-mRNA-1 |
| chr4_1 | exon | 78492592 | 78492717 | 78492592 | ID=Msa0574760-mRNA-1:exon:27862;Parent=Msa0574760-mRNA-1 |
| chr4_1 | exon | 78493321 | 78493460 | 78493321 | ID=Msa0574760-mRNA-1:exon:27861;Parent=Msa0574760-mRNA-1 |
| chr4_1 | exon | 78495891 | 78496055 | 78495891 | ID=Msa0574760-mRNA-1:exon:27860;Parent=Msa0574760-mRNA-1 |
| chr4_1 | five_prime_UTR | 78495919 | 78496055 | 78495919 | ID=Msa0574760-mRNA-1:five_prime_utr;Parent=Msa0574760-mRNA-1 |
| chr4_1 | CDS | 78495891 | 78495918 | 78495891 | ID=Msa0574760-mRNA-1:cds;Parent=Msa0574760-mRNA-1 |
| chr4_1 | CDS | 78493321 | 78493460 | 78493321 | ID=Msa0574760-mRNA-1:cds;Parent=Msa0574760-mRNA-1 |
| chr4_1 | CDS | 78492592 | 78492717 | 78492592 | ID=Msa0574760-mRNA-1:cds;Parent=Msa0574760-mRNA-1 |
| chr4_1 | CDS | 78492369 | 78492495 | 78492369 | ID=Msa0574760-mRNA-1:cds;Parent=Msa0574760-mRNA-1 |
| chr4_1 | CDS | 78491229 | 78491287 | 78491229 | ID=Msa0574760-mRNA-1:cds;Parent=Msa0574760-mRNA-1 |
| chr4_1 | three_prime_UTR | 78490882 | 78491228 | 78490882 | ID=Msa0574760-mRNA-1:three_prime_utr;Parent=Msa0574760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
