Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0183300 | XP_013470345.1 | 100.000 | 489 | 0 | 0 | 1 | 489 | 1 | 489 | 0.0 | 1002 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0183300 | sp|Q9SZN1|VATB2_ARATH | 96.933 | 489 | 13 | 2 | 1 | 489 | 1 | 487 | 0.0 | 962 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0183300 | A0A072VSL4 | 100.000 | 489 | 0 | 0 | 1 | 489 | 1 | 489 | 0.0 | 1002 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006070 | Msa0183300 | -0.831829 | 1.337083e-55 | -8.615850e-47 |
| Msa0011170 | Msa0183300 | -0.800159 | 1.642199e-48 | -8.615850e-47 |
| Msa0028660 | Msa0183300 | -0.829634 | 4.611909e-55 | -8.615850e-47 |
| Msa0044540 | Msa0183300 | 0.895845 | 6.502942e-76 | -8.615850e-47 |
| Msa0054480 | Msa0183300 | -0.814554 | 1.452388e-51 | -8.615850e-47 |
| Msa0054730 | Msa0183300 | 0.806773 | 6.990333e-50 | -8.615850e-47 |
| Msa0055740 | Msa0183300 | -0.830278 | 3.213191e-55 | -8.615850e-47 |
| Msa0063350 | Msa0183300 | 0.826036 | 3.380821e-54 | -8.615850e-47 |
| Msa0081930 | Msa0183300 | -0.801133 | 1.039776e-48 | -8.615850e-47 |
| Msa0084380 | Msa0183300 | -0.805281 | 1.440077e-49 | -8.615850e-47 |
| Msa0091210 | Msa0183300 | 0.972739 | 2.926236e-135 | -8.615850e-47 |
| Msa0091250 | Msa0183300 | 0.953603 | 1.906002e-111 | -8.615850e-47 |
| Msa0128020 | Msa0183300 | -0.800183 | 1.623958e-48 | -8.615850e-47 |
| Msa0136070 | Msa0183300 | -0.813492 | 2.490425e-51 | -8.615850e-47 |
| Msa0136100 | Msa0183300 | -0.800391 | 1.473633e-48 | -8.615850e-47 |
| Msa0140500 | Msa0183300 | 0.806217 | 9.155068e-50 | -8.615850e-47 |
| Msa0160550 | Msa0183300 | -0.804033 | 2.623406e-49 | -8.615850e-47 |
| Msa0183300 | Msa0197660 | -0.819519 | 1.113086e-52 | -8.615850e-47 |
| Msa0183300 | Msa0215320 | 0.806324 | 8.691776e-50 | -8.615850e-47 |
| Msa0183300 | Msa0218270 | -0.800250 | 1.574144e-48 | -8.615850e-47 |
| Msa0183300 | Msa0222890 | -0.813438 | 2.559923e-51 | -8.615850e-47 |
| Msa0183300 | Msa0223410 | 0.831899 | 1.284908e-55 | -8.615850e-47 |
| Msa0183300 | Msa0229490 | 0.807842 | 4.148236e-50 | -8.615850e-47 |
| Msa0183300 | Msa0239800 | -0.809212 | 2.115981e-50 | -8.615850e-47 |
| Msa0183300 | Msa0243890 | -0.828361 | 9.382761e-55 | -8.615850e-47 |
| Msa0183300 | Msa0260680 | -0.816560 | 5.192308e-52 | -8.615850e-47 |
| Msa0183300 | Msa0260950 | 0.835028 | 2.130141e-56 | -8.615850e-47 |
| Msa0183300 | Msa0279220 | -0.803963 | 2.712393e-49 | -8.615850e-47 |
| Msa0183300 | Msa0280090 | -0.816488 | 5.389875e-52 | -8.615850e-47 |
| Msa0183300 | Msa0302580 | 0.830716 | 2.510285e-55 | -8.615850e-47 |
| Msa0183300 | Msa0306210 | 0.846560 | 2.011234e-59 | -8.615850e-47 |
| Msa0183300 | Msa0309770 | -0.817270 | 3.596800e-52 | -8.615850e-47 |
| Msa0183300 | Msa0317510 | -0.815719 | 8.004389e-52 | -8.615850e-47 |
| Msa0183300 | Msa0318980 | -0.802959 | 4.380145e-49 | -8.615850e-47 |
| Msa0183300 | Msa0333720 | 0.828195 | 1.028918e-54 | -8.615850e-47 |
| Msa0183300 | Msa0340450 | -0.830863 | 2.311167e-55 | -8.615850e-47 |
| Msa0183300 | Msa0344690 | 0.814449 | 1.531822e-51 | -8.615850e-47 |
| Msa0183300 | Msa0383800 | -0.807947 | 3.941173e-50 | -8.615850e-47 |
| Msa0183300 | Msa0390400 | 0.810063 | 1.388884e-50 | -8.615850e-47 |
| Msa0183300 | Msa0392040 | 0.815963 | 7.061064e-52 | -8.615850e-47 |
| Msa0183300 | Msa0434180 | -0.813390 | 2.622110e-51 | -8.615850e-47 |
| Msa0183300 | Msa0469940 | 0.811743 | 6.010674e-51 | -8.615850e-47 |
| Msa0183300 | Msa0585000 | 0.801361 | 9.337086e-49 | -8.615850e-47 |
| Msa0183300 | Msa0617640 | -0.809931 | 1.482866e-50 | -8.615850e-47 |
| Msa0183300 | Msa0647450 | 0.804386 | 2.214548e-49 | -8.615850e-47 |
| Msa0183300 | Msa0657970 | -0.801050 | 1.081266e-48 | -8.615850e-47 |
| Msa0183300 | Msa0661190 | 0.853641 | 2.089307e-61 | -8.615850e-47 |
| Msa0183300 | Msa0679290 | 0.825566 | 4.370277e-54 | -8.615850e-47 |
| Msa0183300 | Msa0715700 | -0.806054 | 9.911131e-50 | -8.615850e-47 |
| Msa0183300 | Msa0716840 | -0.811894 | 5.571197e-51 | -8.615850e-47 |
| Msa0183300 | Msa0724210 | -0.803824 | 2.899102e-49 | -8.615850e-47 |
| Msa0183300 | Msa0743950 | -0.805683 | 1.186116e-49 | -8.615850e-47 |
| Msa0183300 | Msa0744170 | 0.824129 | 9.538529e-54 | -8.615850e-47 |
| Msa0183300 | Msa0756630 | 0.806273 | 8.912280e-50 | -8.615850e-47 |
| Msa0183300 | Msa0788070 | 0.807090 | 5.989303e-50 | -8.615850e-47 |
| Msa0183300 | Msa0825240 | 0.828225 | 1.011802e-54 | -8.615850e-47 |
| Msa0183300 | Msa0827350 | 0.807790 | 4.254424e-50 | -8.615850e-47 |
| Msa0183300 | Msa0840820 | -0.807658 | 4.538699e-50 | -8.615850e-47 |
| Msa0183300 | Msa0864250 | -0.801732 | 7.836532e-49 | -8.615850e-47 |
| Msa0183300 | Msa0864470 | 0.803803 | 2.927781e-49 | -8.615850e-47 |
| Msa0183300 | Msa0886330 | 0.838933 | 2.141979e-57 | -8.615850e-47 |
| Msa0183300 | Msa0913480 | 0.826390 | 2.784915e-54 | -8.615850e-47 |
| Msa0183300 | Msa0926890 | -0.801806 | 7.568802e-49 | -8.615850e-47 |
| Msa0183300 | Msa0935910 | -0.810934 | 9.006148e-51 | -8.615850e-47 |
| Msa0183300 | Msa0942550 | 0.823754 | 1.168166e-53 | -8.615850e-47 |
| Msa0183300 | Msa0942560 | 0.834873 | 2.330442e-56 | -8.615850e-47 |
| Msa0183300 | Msa0964130 | -0.805577 | 1.248021e-49 | -8.615850e-47 |
| Msa0183300 | Msa0973600 | -0.812058 | 5.131912e-51 | -8.615850e-47 |
| Msa0183300 | Msa0974070 | -0.802610 | 5.170779e-49 | -8.615850e-47 |
| Msa0183300 | Msa1003620 | -0.805603 | 1.232498e-49 | -8.615850e-47 |
| Msa0183300 | Msa1014540 | -0.824024 | 1.009634e-53 | -8.615850e-47 |
| Msa0183300 | Msa1033410 | 0.836461 | 9.233578e-57 | -8.615850e-47 |
| Msa0183300 | Msa1041730 | -0.827779 | 1.295417e-54 | -8.615850e-47 |
| Msa0183300 | Msa1058710 | -0.821756 | 3.409127e-53 | -8.615850e-47 |
| Msa0183300 | Msa1061680 | -0.820294 | 7.401066e-53 | -8.615850e-47 |
| Msa0183300 | Msa1073070 | 0.837777 | 4.254937e-57 | -8.615850e-47 |
| Msa0183300 | Msa1082500 | -0.808506 | 2.995358e-50 | -8.615850e-47 |
| Msa0183300 | Msa1115430 | -0.821280 | 4.392265e-53 | -8.615850e-47 |
| Msa0183300 | Msa1121450 | 0.834934 | 2.248509e-56 | -8.615850e-47 |
| Msa0183300 | Msa1124540 | 0.826040 | 3.373837e-54 | -8.615850e-47 |
| Msa0183300 | Msa1125080 | -0.827529 | 1.487992e-54 | -8.615850e-47 |
| Msa0183300 | Msa1131670 | 0.826016 | 3.418309e-54 | -8.615850e-47 |
| Msa0183300 | Msa1143930 | 0.806838 | 6.771074e-50 | -8.615850e-47 |
| Msa0183300 | Msa1144720 | 0.806084 | 9.767127e-50 | -8.615850e-47 |
| Msa0183300 | Msa1145250 | 0.804692 | 1.911856e-49 | -8.615850e-47 |
| Msa0183300 | Msa1150660 | -0.805357 | 1.388290e-49 | -8.615850e-47 |
| Msa0183300 | Msa1167220 | -0.824969 | 6.049268e-54 | -8.615850e-47 |
| Msa0183300 | Msa1174980 | -0.809541 | 1.797972e-50 | -8.615850e-47 |
| Msa0183300 | Msa1177070 | -0.816311 | 5.903646e-52 | -8.615850e-47 |
| Msa0183300 | Msa1183100 | 0.807318 | 5.359065e-50 | -8.615850e-47 |
| Msa0183300 | Msa1186950 | 0.816851 | 4.468418e-52 | -8.615850e-47 |
| Msa0183300 | Msa1191890 | 0.800931 | 1.143021e-48 | -8.615850e-47 |
| Msa0183300 | Msa1207470 | 0.825082 | 5.691577e-54 | -8.615850e-47 |
| Msa0183300 | Msa1249490 | -0.808160 | 3.549899e-50 | -8.615850e-47 |
| Msa0183300 | Msa1267060 | -0.807686 | 4.477679e-50 | -8.615850e-47 |
| Msa0183300 | Msa1282580 | 0.825774 | 3.901512e-54 | -8.615850e-47 |
| Msa0183300 | Msa1298260 | -0.817047 | 4.038078e-52 | -8.615850e-47 |
| Msa0183300 | Msa1316980 | -0.806150 | 9.460511e-50 | -8.615850e-47 |
| Msa0183300 | Msa1317320 | 0.833509 | 5.121006e-56 | -8.615850e-47 |
| Msa0183300 | Msa1317480 | 0.827737 | 1.326479e-54 | -8.615850e-47 |
| Msa0183300 | Msa1325860 | 0.817867 | 2.638505e-52 | -8.615850e-47 |
| Msa0183300 | Msa1333410 | -0.809177 | 2.151994e-50 | -8.615850e-47 |
| Msa0183300 | Msa1340260 | -0.800530 | 1.380309e-48 | -8.615850e-47 |
| Msa0183300 | Msa1340270 | -0.812531 | 4.045008e-51 | -8.615850e-47 |
| Msa0183300 | Msa1373030 | -0.803470 | 3.433043e-49 | -8.615850e-47 |
| Msa0183300 | Msa1401530 | -0.810649 | 1.037563e-50 | -8.615850e-47 |
| Msa0183300 | Msa1410760 | 0.808724 | 2.691105e-50 | -8.615850e-47 |
| Msa0183300 | Msa1445390 | 0.803667 | 3.124845e-49 | -8.615850e-47 |
| Msa0183300 | Msa1445610 | 0.830745 | 2.469596e-55 | -8.615850e-47 |
| Msa0183300 | Msa1449250 | 0.835342 | 1.774002e-56 | -8.615850e-47 |
| Msa0183300 | Msa1449340 | 0.821525 | 3.855277e-53 | -8.615850e-47 |
| Msa0183300 | Msa1454910 | 0.838387 | 2.964568e-57 | -8.615850e-47 |
| Msa0183300 | Msa1463670 | -0.806269 | 8.930643e-50 | -8.615850e-47 |
| Msa0183300 | Msa1466540 | -0.809363 | 1.963247e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0183300 | MtrunA17_Chr1g0211291 | 100.000 | 489 | 0 | 0 | 1 | 489 | 1 | 489 | 0.0 | 1002 |
| Msa0183300 | MtrunA17_Chr7g0250051 | 98.364 | 489 | 6 | 2 | 1 | 489 | 1 | 487 | 0.0 | 978 |
| Msa0183300 | MtrunA17_Chr1g0208751 | 28.846 | 364 | 228 | 8 | 89 | 444 | 153 | 493 | 8.70e-29 | 119 |
| Msa0183300 | MtrunA17_Chr4g0015651 | 30.363 | 303 | 191 | 5 | 84 | 384 | 87 | 371 | 1.18e-28 | 119 |
| Msa0183300 | MtrunA17_Chr4g0016741 | 30.363 | 303 | 191 | 5 | 84 | 384 | 87 | 371 | 1.18e-28 | 119 |
| Msa0183300 | MtrunA17_CPg0492941 | 30.363 | 303 | 191 | 5 | 84 | 384 | 87 | 371 | 1.18e-28 | 119 |
| Msa0183300 | MtrunA17_Chr1g0208761 | 28.642 | 405 | 251 | 12 | 52 | 444 | 118 | 496 | 1.21e-27 | 116 |
| Msa0183300 | MtrunA17_Chr3g0090971 | 27.198 | 364 | 233 | 7 | 89 | 444 | 94 | 433 | 2.03e-25 | 108 |
| Msa0183300 | MtrunA17_Chr4g0016371 | 27.397 | 365 | 231 | 7 | 89 | 444 | 55 | 394 | 2.14e-25 | 108 |
| Msa0183300 | MtrunA17_CPg0493401 | 27.397 | 365 | 231 | 7 | 89 | 444 | 94 | 433 | 2.98e-25 | 108 |
| Msa0183300 | MtrunA17_Chr7g0229391 | 27.123 | 365 | 232 | 8 | 89 | 444 | 94 | 433 | 2.04e-24 | 105 |
| Msa0183300 | MtrunA17_MTg0490471 | 26.586 | 331 | 229 | 5 | 57 | 384 | 62 | 381 | 5.10e-24 | 105 |
| Msa0183300 | MtrunA17_Chr4g0000341 | 28.936 | 235 | 158 | 4 | 226 | 453 | 303 | 535 | 2.92e-21 | 97.1 |
| Msa0183300 | MtrunA17_Chr2g0278821 | 27.000 | 200 | 118 | 4 | 244 | 441 | 11 | 184 | 1.69e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0183300 | AT4G38510.5 | 96.933 | 489 | 13 | 2 | 1 | 489 | 8 | 494 | 0.0 | 963 |
| Msa0183300 | AT4G38510.1 | 96.933 | 489 | 13 | 2 | 1 | 489 | 1 | 487 | 0.0 | 962 |
| Msa0183300 | AT4G38510.3 | 96.933 | 489 | 13 | 2 | 1 | 489 | 1 | 487 | 0.0 | 962 |
| Msa0183300 | AT4G38510.4 | 96.933 | 489 | 13 | 2 | 1 | 489 | 1 | 487 | 0.0 | 962 |
| Msa0183300 | AT4G38510.2 | 96.933 | 489 | 13 | 2 | 1 | 489 | 1 | 487 | 0.0 | 962 |
| Msa0183300 | AT1G20260.1 | 95.464 | 485 | 22 | 0 | 3 | 487 | 1 | 485 | 0.0 | 953 |
| Msa0183300 | AT1G76030.1 | 96.888 | 482 | 14 | 1 | 6 | 487 | 4 | 484 | 0.0 | 951 |
| Msa0183300 | ATCG00120.1 | 27.809 | 356 | 212 | 6 | 84 | 437 | 87 | 399 | 1.16e-28 | 119 |
| Msa0183300 | AT5G08690.1 | 28.967 | 397 | 246 | 11 | 60 | 444 | 121 | 493 | 3.52e-28 | 118 |
| Msa0183300 | AT5G08670.1 | 28.967 | 397 | 246 | 11 | 60 | 444 | 121 | 493 | 4.33e-28 | 117 |
| Msa0183300 | AT5G08680.1 | 28.967 | 397 | 246 | 11 | 60 | 444 | 124 | 496 | 5.26e-28 | 117 |
| Msa0183300 | ATMG01190.1 | 27.492 | 331 | 226 | 5 | 57 | 384 | 62 | 381 | 1.69e-26 | 112 |
| Msa0183300 | AT2G07698.1 | 27.219 | 338 | 232 | 5 | 57 | 391 | 332 | 658 | 5.24e-26 | 112 |
| Msa0183300 | ATCG00480.1 | 28.090 | 356 | 238 | 5 | 90 | 444 | 95 | 433 | 7.26e-26 | 110 |
| Msa0183300 | AT1G78900.1 | 28.936 | 235 | 158 | 4 | 226 | 453 | 302 | 534 | 2.86e-21 | 97.8 |
| Msa0183300 | AT1G78900.2 | 28.936 | 235 | 158 | 4 | 226 | 453 | 302 | 534 | 2.86e-21 | 97.8 |
Find 185 sgRNAs with CRISPR-Local
Find 467 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGACAATCTCTTGATATT+TGG | 0.086118 | 1_4:+72170480 | None:intergenic |
| GCATGGTTAGAATTGGAATT+TGG | 0.112862 | 1_4:+72166518 | None:intergenic |
| ACAGTTGTATCTGGAATTTC+TGG | 0.143455 | 1_4:-72165389 | Msa0183300:intron |
| ACATCTATGGGTTCTCCTTT+TGG | 0.230517 | 1_4:+72165024 | None:intergenic |
| CTCCGAATTGTTAATTAGTT+TGG | 0.238354 | 1_4:-72164709 | Msa0183300:three_prime_UTR |
| ATCTTGTAATTTCATTATTT+AGG | 0.241526 | 1_4:-72164874 | Msa0183300:three_prime_UTR |
| TATTTAGGATATTTGTAATA+AGG | 0.248801 | 1_4:-72164859 | Msa0183300:three_prime_UTR |
| TTGACAATCTCTTGATATTT+GGG | 0.268902 | 1_4:+72170481 | None:intergenic |
| TTTACGACCGTACAGTTTAC+TGG | 0.269439 | 1_4:-72170077 | Msa0183300:CDS |
| TATAGGAATCACAACATCTA+TGG | 0.273978 | 1_4:+72165011 | None:intergenic |
| GGTCGGATATTTAACGGTTC+TGG | 0.297261 | 1_4:-72169192 | Msa0183300:CDS |
| CATGGTTAGAATTGGAATTT+GGG | 0.316289 | 1_4:+72166519 | None:intergenic |
| CCAGGATAACCACGTCTTCC+TGG | 0.316708 | 1_4:+72166613 | None:intergenic |
| ATATTATTAACAGTTGTATC+TGG | 0.321630 | 1_4:-72165398 | Msa0183300:intron |
| TCACCACTGCAGAGTGCTAT+TGG | 0.329482 | 1_4:-72165749 | Msa0183300:intron |
| TACTTGTGTTGCACACAGTT+TGG | 0.330060 | 1_4:-72164958 | Msa0183300:three_prime_UTR |
| TCTTACTACTGCTGAATATC+TGG | 0.332465 | 1_4:-72166957 | Msa0183300:CDS |
| ATTCTCTCTGTATGGTGCTT+TGG | 0.332926 | 1_4:-72164678 | Msa0183300:three_prime_UTR |
| TCATTTGGCATGGTTAGAAT+TGG | 0.334129 | 1_4:+72166511 | None:intergenic |
| TGCGGGTGTCGTAGGCTCCC+TGG | 0.338118 | 1_4:+72165341 | None:intergenic |
| CACCACTGCAGAGTGCTATT+GGG | 0.340834 | 1_4:-72165748 | Msa0183300:intron |
| ATTATTTCTTTACCATCATT+TGG | 0.341729 | 1_4:+72166496 | None:intergenic |
| CAGGTATTTGAAGGTACATC+TGG | 0.345618 | 1_4:-72170113 | Msa0183300:CDS |
| GAGATTGTCAATATTCGTTT+AGG | 0.348480 | 1_4:-72170469 | Msa0183300:CDS |
| CTGTGCAGCAATTTCATTAT+GGG | 0.352240 | 1_4:+72168894 | None:intergenic |
| TCTGTGCAGCAATTTCATTA+TGG | 0.352813 | 1_4:+72168893 | None:intergenic |
| CAGCATCTCGGCTGTAAAAC+TGG | 0.358949 | 1_4:+72165230 | None:intergenic |
| GTCCGTCATAAATATAATAA+AGG | 0.361171 | 1_4:-72165092 | Msa0183300:three_prime_UTR |
| GCACCATACAGAGAGAATTA+TGG | 0.370583 | 1_4:+72164683 | None:intergenic |
| GAATCTGGCAAAAGTGGCTT+TGG | 0.372685 | 1_4:-72164747 | Msa0183300:three_prime_UTR |
| GGAACGTGGGTGAGACTCAC+TGG | 0.376659 | 1_4:+72171709 | None:intergenic |
| AAGTAAGCCTCAGGTAAAAT+TGG | 0.379673 | 1_4:+72169147 | None:intergenic |
| CTAATTAACAATTCGGAGCT+TGG | 0.392355 | 1_4:+72164714 | None:intergenic |
| TTTGGGATGGTTGGAATTTG+TGG | 0.399858 | 1_4:-72164940 | Msa0183300:three_prime_UTR |
| GAGGCTTACTTGGATATATC+AGG | 0.401427 | 1_4:-72169135 | Msa0183300:intron |
| GTGATAATACGTTCAATTGT+AGG | 0.404208 | 1_4:+72166992 | None:intergenic |
| CATCCAACTCCTGATCTTAC+CGG | 0.404800 | 1_4:-72166384 | Msa0183300:CDS |
| AGGACTGTGTCTGGAGTTGC+CGG | 0.405257 | 1_4:-72170636 | Msa0183300:CDS |
| GGTTCTCTCACTAGGGTTGA+TGG | 0.409584 | 1_4:+72169017 | None:intergenic |
| AGATTACCAAATTAAGGAAA+AGG | 0.411767 | 1_4:+72167599 | None:intergenic |
| TGGCGAAAAGGCTGTTGTTC+AGG | 0.415818 | 1_4:-72170407 | Msa0183300:intron |
| ACTTGTGTTGCACACAGTTT+GGG | 0.417897 | 1_4:-72164957 | Msa0183300:three_prime_UTR |
| CCAAGCATGTCCAGTGATAC+AGG | 0.419348 | 1_4:+72169213 | None:intergenic |
| AATCAATTGCCCATGACATT+AGG | 0.421049 | 1_4:+72165152 | None:intergenic |
| TTTACGCCCCTCAATTCTTC+CGG | 0.423822 | 1_4:+72166552 | None:intergenic |
| TCTTCCTGGCACCTCTTCTC+TGG | 0.425819 | 1_4:+72166627 | None:intergenic |
| TACCAAACTAATTAACAATT+CGG | 0.429020 | 1_4:+72164707 | None:intergenic |
| CAACAACAGCTTTCATTGCC+TGG | 0.434544 | 1_4:+72165535 | None:intergenic |
| TCGGGATAGGTTCTCTCACT+AGG | 0.437152 | 1_4:+72169009 | None:intergenic |
| TGAGAGGAAGTTTGTTGCCC+AGG | 0.437811 | 1_4:-72165359 | Msa0183300:CDS |
| ATGCTTGGTCGGATATTTAA+CGG | 0.442245 | 1_4:-72169198 | Msa0183300:CDS |
| ACAGAATACAGGACTGTGTC+TGG | 0.446233 | 1_4:-72170645 | Msa0183300:intron |
| GATTACCAAATTAAGGAAAA+GGG | 0.449091 | 1_4:+72167600 | None:intergenic |
| TGATCTTACCGGATATATTA+CGG | 0.452298 | 1_4:-72166373 | Msa0183300:CDS |
| TAGAGACTGGAATATATTGC+GGG | 0.454648 | 1_4:+72165324 | None:intergenic |
| GCCTGTTCAGTTAGTCCAAA+AGG | 0.458937 | 1_4:-72165039 | Msa0183300:three_prime_UTR |
| ATTGGCGGACCATTGTCAAT+TGG | 0.464082 | 1_4:+72169165 | None:intergenic |
| CCAGGAAGACGTGGTTATCC+TGG | 0.466984 | 1_4:-72166613 | Msa0183300:CDS |
| TATCCATAATTCTCTCTGTA+TGG | 0.467790 | 1_4:-72164686 | Msa0183300:three_prime_UTR |
| CTGCCCCTCCGTAATATATC+CGG | 0.472296 | 1_4:+72166365 | None:intergenic |
| GGACAAGTTCTCGAGGTTGA+TGG | 0.472504 | 1_4:-72170427 | Msa0183300:CDS |
| TTATTAATGTCACAGAATAC+AGG | 0.473189 | 1_4:-72170656 | Msa0183300:intron |
| GTCAATATTCGTTTAGGCGA+TGG | 0.473500 | 1_4:-72170463 | Msa0183300:CDS |
| AGACCGGCAGCTGAAAATAG+AGG | 0.475986 | 1_4:+72168919 | None:intergenic |
| TGAACGTGCCGGAAGAATTG+AGG | 0.476839 | 1_4:-72166560 | Msa0183300:CDS |
| GCGGGTGTCGTAGGCTCCCT+GGG | 0.477631 | 1_4:+72165342 | None:intergenic |
| ACTATTGATCAGGTATTTGA+AGG | 0.479209 | 1_4:-72170122 | Msa0183300:intron |
| GATTGTTTGAAGTTCTAAGA+TGG | 0.489532 | 1_4:-72170952 | Msa0183300:intron |
| TTGTGATCAGAGAGGGAGAT+GGG | 0.490683 | 1_4:+72171688 | None:intergenic |
| TCCAGTCTGTATCATCTCCT+CGG | 0.491457 | 1_4:+72168990 | None:intergenic |
| GTAATATATCCGGTAAGATC+AGG | 0.495201 | 1_4:+72166375 | None:intergenic |
| TGCACACAGTTTGGGATGGT+TGG | 0.495421 | 1_4:-72164949 | Msa0183300:three_prime_UTR |
| CTCAAGAATGACCAATGGTC+CGG | 0.496147 | 1_4:+72170617 | None:intergenic |
| CTTTGAGGAGAACGGCTCAA+TGG | 0.497375 | 1_4:-72167632 | Msa0183300:CDS |
| ATTGTTTGAAGTTCTAAGAT+GGG | 0.497535 | 1_4:-72170951 | Msa0183300:intron |
| GCACAGATTTGTCGTCAAGC+TGG | 0.499909 | 1_4:-72168877 | Msa0183300:CDS |
| CTCGAGAACTTGTCCACGCC+GGG | 0.500617 | 1_4:+72170435 | None:intergenic |
| GACGACGGCACCTTGGAGAT+AGG | 0.501299 | 1_4:-72170903 | Msa0183300:CDS |
| CCAGTCTGTATCATCTCCTC+GGG | 0.502795 | 1_4:+72168991 | None:intergenic |
| GCTGCCAGAGAAGAGGTGCC+AGG | 0.506143 | 1_4:-72166631 | Msa0183300:CDS |
| AACCTTTATTATATTTATGA+CGG | 0.506323 | 1_4:+72165090 | None:intergenic |
| GAACGTGCCGGAAGAATTGA+GGG | 0.506526 | 1_4:-72166559 | Msa0183300:CDS |
| TTCTTTACCATCATTTGGCA+TGG | 0.507173 | 1_4:+72166501 | None:intergenic |
| TGAAACAAGCAAACATACAC+TGG | 0.507667 | 1_4:+72164908 | None:intergenic |
| GAATATATTGCGGGTGTCGT+AGG | 0.509788 | 1_4:+72165333 | None:intergenic |
| ATGTTCTTCCATCACTATCT+CGG | 0.513623 | 1_4:-72165881 | Msa0183300:CDS |
| CTGTATGCAAATTATGCCAT+TGG | 0.516378 | 1_4:-72165567 | Msa0183300:CDS |
| TCAATCAGCGCCTAATGTCA+TGG | 0.516471 | 1_4:-72165162 | Msa0183300:three_prime_UTR |
| CTGTATCATCTCCTCGGGAT+AGG | 0.517113 | 1_4:+72168996 | None:intergenic |
| TGCAGCTATGGGAGTTAACA+TGG | 0.517732 | 1_4:-72167680 | Msa0183300:CDS |
| CGACAATGACGACGGCACCT+TGG | 0.517816 | 1_4:-72170910 | Msa0183300:CDS |
| TGCCATTGGAAAGGATGTCC+AGG | 0.518353 | 1_4:-72165553 | Msa0183300:CDS |
| ATCACTATCTCGGTTGATGA+AGG | 0.519694 | 1_4:-72165871 | Msa0183300:intron |
| ACATTAGGCGCTGATTGAGC+AGG | 0.520877 | 1_4:+72165167 | None:intergenic |
| ATTCTAACCATGCCAAATGA+TGG | 0.521293 | 1_4:-72166508 | Msa0183300:intron |
| TCTGGGGAATCTGGCAAAAG+TGG | 0.522767 | 1_4:-72164753 | Msa0183300:three_prime_UTR |
| GTCTGGAGTTGCCGGACCAT+TGG | 0.523391 | 1_4:-72170628 | Msa0183300:CDS |
| ATCTTGCATGGACCTTACTC+CGG | 0.526356 | 1_4:-72165300 | Msa0183300:CDS |
| GTAAAACTGGTCAAGAGTCT+TGG | 0.529021 | 1_4:+72165243 | None:intergenic |
| TGGGGAGGGAATGACTAGAA+AGG | 0.531100 | 1_4:-72165729 | Msa0183300:CDS |
| CAGGCAATGAAAGCTGTTGT+TGG | 0.535099 | 1_4:-72165534 | Msa0183300:CDS |
| ACTGAACAGGCTCGAAAATG+AGG | 0.535618 | 1_4:+72165051 | None:intergenic |
| TAATAAGGATAGTTGTCACT+TGG | 0.536391 | 1_4:-72164844 | Msa0183300:three_prime_UTR |
| GATATATCCAAGTAAGCCTC+AGG | 0.536974 | 1_4:+72169138 | None:intergenic |
| TCTCGAGGTTGATGGCGAAA+AGG | 0.540595 | 1_4:-72170419 | Msa0183300:CDS |
| TCCATGCAAGATCTAGAGAC+TGG | 0.542399 | 1_4:+72165311 | None:intergenic |
| CCTGTATCACTGGACATGCT+TGG | 0.543279 | 1_4:-72169213 | Msa0183300:CDS |
| TAGGCAGTTGCATAATAGAC+AGG | 0.544818 | 1_4:-72166331 | Msa0183300:intron |
| TCCAGTCTCTAGATCTTGCA+TGG | 0.545696 | 1_4:-72165312 | Msa0183300:CDS |
| GGCACCTTGGAGATAGGAAT+GGG | 0.545991 | 1_4:-72170897 | Msa0183300:intron |
| CGGCACCTTGGAGATAGGAA+TGG | 0.547991 | 1_4:-72170898 | Msa0183300:CDS |
| GAGAGGAAGTTTGTTGCCCA+GGG | 0.548471 | 1_4:-72165358 | Msa0183300:CDS |
| ATCATCAATTACCAGCATCT+CGG | 0.552362 | 1_4:+72165218 | None:intergenic |
| AGTGATGGAAGAACATTGAT+TGG | 0.552550 | 1_4:+72165888 | None:intergenic |
| CAATCAGCGCCTAATGTCAT+GGG | 0.553748 | 1_4:-72165161 | Msa0183300:three_prime_UTR |
| TTTGTGATCAGAGAGGGAGA+TGG | 0.553774 | 1_4:+72171687 | None:intergenic |
| TCTTGATTTATGCAGGGAGG+AGG | 0.554491 | 1_4:-72167730 | Msa0183300:intron |
| AACTGGTCAAGAGTCTTGGC+TGG | 0.554684 | 1_4:+72165247 | None:intergenic |
| CCCGAGGAGATGATACAGAC+TGG | 0.555094 | 1_4:-72168991 | Msa0183300:CDS |
| GGAAGAATTGAGGGGCGTAA+AGG | 0.556865 | 1_4:-72166550 | Msa0183300:CDS |
| TTGAAGTTCTAAGATGGGTG+TGG | 0.557939 | 1_4:-72170946 | Msa0183300:intron |
| AAGCGTGACTTTGAGGAGAA+CGG | 0.558460 | 1_4:-72167640 | Msa0183300:CDS |
| ATAGGAATCACAACATCTAT+GGG | 0.563203 | 1_4:+72165012 | None:intergenic |
| ACCACTGCAGAGTGCTATTG+GGG | 0.563672 | 1_4:-72165747 | Msa0183300:intron |
| CAGAGAGGGAGATGGGAACG+TGG | 0.564661 | 1_4:+72171695 | None:intergenic |
| CGGGATAGGTTCTCTCACTA+GGG | 0.566355 | 1_4:+72169010 | None:intergenic |
| TATACGATGAAGAAGTTCAC+GGG | 0.567632 | 1_4:+72165270 | None:intergenic |
| GCAACAATTTATGAACGTGC+CGG | 0.568995 | 1_4:-72166571 | Msa0183300:CDS |
| TGCCTGGACATCCTTTCCAA+TGG | 0.569487 | 1_4:+72165551 | None:intergenic |
| CTGCAGAGTGCTATTGGGGA+GGG | 0.572458 | 1_4:-72165743 | Msa0183300:intron |
| TATCACTGGACATGCTTGGT+CGG | 0.573162 | 1_4:-72169209 | Msa0183300:CDS |
| CTAGAGACTGGAATATATTG+CGG | 0.576024 | 1_4:+72165323 | None:intergenic |
| TGTGCAGCAATTTCATTATG+GGG | 0.578028 | 1_4:+72168895 | None:intergenic |
| TCATTCTGATGTGTCCAACC+AGG | 0.578586 | 1_4:-72165705 | Msa0183300:intron |
| AGCACTTTCATCTGAGGACC+TGG | 0.579733 | 1_4:-72165505 | Msa0183300:intron |
| TAAGCCTCAGGTAAAATTGG+CGG | 0.582523 | 1_4:+72169150 | None:intergenic |
| ACGAACAGATAAATACATCA+AGG | 0.595675 | 1_4:+72164815 | None:intergenic |
| GGACAGAACAAATGTGGACT+AGG | 0.598393 | 1_4:+72165111 | None:intergenic |
| AGGGGCAGATATACATCGAT+AGG | 0.599010 | 1_4:-72166350 | Msa0183300:CDS |
| ATGGAAGAACATTGATTGGT+GGG | 0.602705 | 1_4:+72165892 | None:intergenic |
| GTGTTGCACACAGTTTGGGA+TGG | 0.602819 | 1_4:-72164953 | Msa0183300:three_prime_UTR |
| AGGTATTTGAAGGTACATCT+GGG | 0.603787 | 1_4:-72170112 | Msa0183300:CDS |
| AATTTCTGGACAAGTTTGAG+AGG | 0.606081 | 1_4:-72165375 | Msa0183300:CDS |
| ACTTTCTCAAGAATGACCAA+TGG | 0.606143 | 1_4:+72170612 | None:intergenic |
| GTATACGATGAAGAAGTTCA+CGG | 0.610810 | 1_4:+72165269 | None:intergenic |
| TATCCGGTAAGATCAGGAGT+TGG | 0.612787 | 1_4:+72166381 | None:intergenic |
| TTCATCAACCGAGATAGTGA+TGG | 0.612897 | 1_4:+72165873 | None:intergenic |
| AGAAGAAGCACTTTCATCTG+AGG | 0.617772 | 1_4:-72165511 | Msa0183300:CDS |
| GGTCATTCTTGAGAAAGTGA+AGG | 0.620043 | 1_4:-72170607 | Msa0183300:intron |
| TTATGCTGATGCTCTTCGTG+AGG | 0.621125 | 1_4:-72166885 | Msa0183300:intron |
| GTCATGAATTCTATTGCTAG+AGG | 0.622259 | 1_4:-72168952 | Msa0183300:CDS |
| GGTATCTGCTGCCAGAGAAG+AGG | 0.624465 | 1_4:-72166638 | Msa0183300:CDS |
| GAAGAGGTGCCAGGAAGACG+TGG | 0.628045 | 1_4:-72166622 | Msa0183300:CDS |
| GACCGTACAGTTTACTGGAG+AGG | 0.629013 | 1_4:-72170072 | Msa0183300:intron |
| AAAATCGAAAACCACAGCAC+AGG | 0.630487 | 1_4:-72171665 | Msa0183300:intron |
| GTGCAGCAATTTCATTATGG+GGG | 0.632413 | 1_4:+72168896 | None:intergenic |
| TACCTCTCCAGTAAACTGTA+CGG | 0.633139 | 1_4:+72170070 | None:intergenic |
| GATGGAAGAACATTGATTGG+TGG | 0.633609 | 1_4:+72165891 | None:intergenic |
| ACTGCAGAGTGCTATTGGGG+AGG | 0.635578 | 1_4:-72165744 | Msa0183300:intron |
| GGCGATGGAACTACCCGGCG+TGG | 0.636786 | 1_4:-72170448 | Msa0183300:CDS |
| CGTACCCATTCCTATCTCCA+AGG | 0.637796 | 1_4:+72170893 | None:intergenic |
| GACCGGCAGCTGAAAATAGA+GGG | 0.638267 | 1_4:+72168920 | None:intergenic |
| CCTCGAGAACTTGTCCACGC+CGG | 0.642978 | 1_4:+72170434 | None:intergenic |
| GAAACAAGCAAACATACACT+GGG | 0.645433 | 1_4:+72164909 | None:intergenic |
| GAATATCTGGCGTATGAATG+TGG | 0.645805 | 1_4:-72166944 | Msa0183300:CDS |
| TGCAAATTATGCCATTGGAA+AGG | 0.646117 | 1_4:-72165562 | Msa0183300:CDS |
| GAAGTCTGATAATCTTCTTG+AGG | 0.648163 | 1_4:-72168836 | Msa0183300:intron |
| GAACGTGGGTGAGACTCACT+GGG | 0.650343 | 1_4:+72171710 | None:intergenic |
| CTTACCGGATATATTACGGA+GGG | 0.654500 | 1_4:-72166369 | Msa0183300:CDS |
| AGAGAGGGAGATGGGAACGT+GGG | 0.657598 | 1_4:+72171696 | None:intergenic |
| AGATCTGTATACATATAACC+AGG | 0.661413 | 1_4:+72166595 | None:intergenic |
| TATGACGGACAGAACAAATG+TGG | 0.665248 | 1_4:+72165105 | None:intergenic |
| CAAACAAGAAGAGACCTGGT+TGG | 0.666933 | 1_4:+72165691 | None:intergenic |
| CCGGCGTGGACAAGTTCTCG+AGG | 0.672366 | 1_4:-72170434 | Msa0183300:CDS |
| TCTGGAAAACCAATTGACAA+TGG | 0.674567 | 1_4:-72169174 | Msa0183300:CDS |
| GTTTAGGCGATGGAACTACC+CGG | 0.676003 | 1_4:-72170453 | Msa0183300:CDS |
| AATGCTAGCGACAATGACGA+CGG | 0.701949 | 1_4:-72170918 | Msa0183300:CDS |
| TTACCGGATATATTACGGAG+GGG | 0.706702 | 1_4:-72166368 | Msa0183300:CDS |
| TAGTGAGAGAACCTATCCCG+AGG | 0.712174 | 1_4:-72169007 | Msa0183300:CDS |
| TGACGTACGTACCTGTGCTG+TGG | 0.713925 | 1_4:+72171654 | None:intergenic |
| ATACGATGAAGAAGTTCACG+GGG | 0.717533 | 1_4:+72165271 | None:intergenic |
| TCTTACCGGATATATTACGG+AGG | 0.726344 | 1_4:-72166370 | Msa0183300:CDS |
| GCAGTAGTAAGAGCAATACG+AGG | 0.737884 | 1_4:+72166968 | None:intergenic |
| AACGTGCCGGAAGAATTGAG+GGG | 0.763048 | 1_4:-72166558 | Msa0183300:CDS |
| TACGATGAAGAAGTTCACGG+GGG | 0.801804 | 1_4:+72165272 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATTATATTATTAATTA+AGG | - | chr1_4:72167920-72167939 | Msa0183300:intron | 0.0% |
| !! | TAATCTTAATTAAAAATTGA+AGG | + | chr1_4:72164821-72164840 | None:intergenic | 10.0% |
| !!! | TAATATATTTCTAATTATTC+AGG | - | chr1_4:72167309-72167328 | Msa0183300:intron | 10.0% |
| !!! | TTATAATTTTTTTAATAAGG+GGG | + | chr1_4:72169255-72169274 | None:intergenic | 10.0% |
| !!! | TTTGTATTGATTTTAATGAA+TGG | - | chr1_4:72165234-72165253 | Msa0183300:CDS | 15.0% |
| !!! | TCTTTTTATTGATTTATCAA+TGG | + | chr1_4:72165544-72165563 | None:intergenic | 15.0% |
| !! | AAACTATAAAATGACATTAA+CGG | + | chr1_4:72166197-72166216 | None:intergenic | 15.0% |
| !!! | TAAACAGCATATATTTTTAT+GGG | + | chr1_4:72166392-72166411 | None:intergenic | 15.0% |
| !!! | ATAAACAGCATATATTTTTA+TGG | + | chr1_4:72166393-72166412 | None:intergenic | 15.0% |
| !! | GAAAAGAAATATTATAAGAT+AGG | - | chr1_4:72167690-72167709 | Msa0183300:CDS | 15.0% |
| !!! | TTTTAAAGATTACCAAATTA+AGG | + | chr1_4:72168764-72168783 | None:intergenic | 15.0% |
| !!! | AATTTTCTAAAAACGTTAAA+TGG | - | chr1_4:72169134-72169153 | Msa0183300:intron | 15.0% |
| !! | TTATATGTAAACTATCTTAT+TGG | - | chr1_4:72170708-72170727 | Msa0183300:intron | 15.0% |
| !! | AAAAAAAAAGACTATCTTAA+TGG | - | chr1_4:72170743-72170762 | Msa0183300:intron | 15.0% |
| !! | AACCTTTATTATATTTATGA+CGG | + | chr1_4:72171267-72171286 | None:intergenic | 15.0% |
| !! | ATCTTGTAATTTCATTATTT+AGG | - | chr1_4:72171480-72171499 | Msa0183300:intron | 15.0% |
| !!! | TATTTAGGATATTTGTAATA+AGG | - | chr1_4:72171495-72171514 | Msa0183300:intron | 15.0% |
| !! | ATTAAAAATTGAAGGAAGTA+TGG | + | chr1_4:72164813-72164832 | None:intergenic | 20.0% |
| !! | TAATGAATGGAATAGAAATA+TGG | - | chr1_4:72165247-72165266 | Msa0183300:CDS | 20.0% |
| !! | GTTTATACAATAGAAAATTG+TGG | - | chr1_4:72165269-72165288 | Msa0183300:CDS | 20.0% |
| !! | AGAACATTCAATAAGAATAT+CGG | + | chr1_4:72165796-72165815 | None:intergenic | 20.0% |
| !! | TCTTAATTAACTCAAAAGAT+AGG | + | chr1_4:72166014-72166033 | None:intergenic | 20.0% |
| !! | CTTTATTAAAACTATTGATC+AGG | - | chr1_4:72166222-72166241 | Msa0183300:intron | 20.0% |
| !! | TATCTTCTTTATCATTATCT+GGG | + | chr1_4:72166599-72166618 | None:intergenic | 20.0% |
| !! | TTATCTTCTTTATCATTATC+TGG | + | chr1_4:72166600-72166619 | None:intergenic | 20.0% |
| !!! | TTTAACTTGAAATTTTGTAG+TGG | - | chr1_4:72166736-72166755 | Msa0183300:intron | 20.0% |
| !! | TTAAATCTGCTTAGAAAATA+GGG | - | chr1_4:72166823-72166842 | Msa0183300:intron | 20.0% |
| !! | AAACTAATAGAATAGTAATC+AGG | + | chr1_4:72166894-72166913 | None:intergenic | 20.0% |
| !! | TAAAAGTTCTTCCTTTAAAT+TGG | - | chr1_4:72167013-72167032 | Msa0183300:intron | 20.0% |
| !! | AAATATTATAAGATAGGAAC+TGG | - | chr1_4:72167696-72167715 | Msa0183300:CDS | 20.0% |
| !! | AATATTATAAGATAGGAACT+GGG | - | chr1_4:72167697-72167716 | Msa0183300:CDS | 20.0% |
| !!! | TCATTTTGACTGTAAAAAAA+AGG | - | chr1_4:72168088-72168107 | Msa0183300:intron | 20.0% |
| !! | TACTCATATTACATAAAGTA+TGG | + | chr1_4:72168585-72168604 | None:intergenic | 20.0% |
| !! | TACTTTATGTAATATGAGTA+AGG | - | chr1_4:72168585-72168604 | Msa0183300:intron | 20.0% |
| !!! | TTTGATTCTTCATTTTTCTT+TGG | - | chr1_4:72168940-72168959 | Msa0183300:CDS | 20.0% |
| !!! | TTGATTCTTCATTTTTCTTT+GGG | - | chr1_4:72168941-72168960 | Msa0183300:CDS | 20.0% |
| !! | ATCAATAGATATATATGTAG+AGG | - | chr1_4:72169026-72169045 | Msa0183300:CDS | 20.0% |
| !! | TTTAATGTAGAACTAGTATT+TGG | - | chr1_4:72169062-72169081 | Msa0183300:intron | 20.0% |
| !!! | GACTTCATTATTTTGTTTAA+TGG | - | chr1_4:72169183-72169202 | Msa0183300:CDS | 20.0% |
| !! | GGGTAAGAAATAAAAATTAT+CGG | + | chr1_4:72169289-72169308 | None:intergenic | 20.0% |
| !!! | TTTTCCTAATAAATTACAGT+TGG | + | chr1_4:72169502-72169521 | None:intergenic | 20.0% |
| !!! | ATTATTTCTTTACCATCATT+TGG | + | chr1_4:72169861-72169880 | None:intergenic | 20.0% |
| !! | ATATAAAAGCAGTTAATCAT+TGG | - | chr1_4:72170175-72170194 | Msa0183300:intron | 20.0% |
| !! | ACATATGTTTCTTAATCAAA+AGG | - | chr1_4:72170549-72170568 | Msa0183300:intron | 20.0% |
| !! | TAAAAAAAGAAAACTACACA+GGG | + | chr1_4:72170691-72170710 | None:intergenic | 20.0% |
| !! | ATAAAAAAAGAAAACTACAC+AGG | + | chr1_4:72170692-72170711 | None:intergenic | 20.0% |
| !! | ATACAACTGTTAATAATATG+GGG | + | chr1_4:72170955-72170974 | None:intergenic | 20.0% |
| !! | GATACAACTGTTAATAATAT+GGG | + | chr1_4:72170956-72170975 | None:intergenic | 20.0% |
| !! | AGATACAACTGTTAATAATA+TGG | + | chr1_4:72170957-72170976 | None:intergenic | 20.0% |
| !! | ATATTATTAACAGTTGTATC+TGG | - | chr1_4:72170956-72170975 | Msa0183300:intron | 20.0% |
| !! | TACCAAACTAATTAACAATT+CGG | + | chr1_4:72171650-72171669 | None:intergenic | 20.0% |
| !! | ATTAGTTTCATACTGAGATT+TGG | + | chr1_4:72164769-72164788 | None:intergenic | 25.0% |
| ! | TTAGCACAAAATAAAGAATC+AGG | + | chr1_4:72164845-72164864 | None:intergenic | 25.0% |
| ! | CAAAAATTACCATTTGCAAT+AGG | - | chr1_4:72165069-72165088 | Msa0183300:three_prime_UTR | 25.0% |
| !! | AATTTAGAACCTATTGCAAA+TGG | + | chr1_4:72165081-72165100 | None:intergenic | 25.0% |
| ! | GAAACAAAAATTGATCTGAT+TGG | + | chr1_4:72165120-72165139 | None:intergenic | 25.0% |
| !!! | ATTGTTTGAAGTTCTAAGAT+GGG | - | chr1_4:72165403-72165422 | Msa0183300:intron | 25.0% |
| ! | AACAAACAGACACATAATTT+AGG | + | chr1_4:72165679-72165698 | None:intergenic | 25.0% |
| ! | TTATTAATGTCACAGAATAC+AGG | - | chr1_4:72165698-72165717 | Msa0183300:intron | 25.0% |
| ! | TTGACAATCTCTTGATATTT+GGG | + | chr1_4:72165876-72165895 | None:intergenic | 25.0% |
| ! | ATTGACAATCTCTTGATATT+TGG | + | chr1_4:72165877-72165896 | None:intergenic | 25.0% |
| ! | TAATTAACTCAAAAGATAGG+AGG | + | chr1_4:72166011-72166030 | None:intergenic | 25.0% |
| ! | TGTCTTATCTCAATGAAATT+TGG | - | chr1_4:72166413-72166432 | Msa0183300:intron | 25.0% |
| ! | TAACAGCTAATGCATTATTT+AGG | + | chr1_4:72166450-72166469 | None:intergenic | 25.0% |
| ! | CTTAAATCTGCTTAGAAAAT+AGG | - | chr1_4:72166822-72166841 | Msa0183300:intron | 25.0% |
| ! | TAAATCTGCTTAGAAAATAG+GGG | - | chr1_4:72166824-72166843 | Msa0183300:intron | 25.0% |
| ! | TTGAAATTCTAGTAATCACA+AGG | - | chr1_4:72166862-72166881 | Msa0183300:intron | 25.0% |
| !!! | ACTATTCTATTAGTTTGTTC+TGG | - | chr1_4:72166898-72166917 | Msa0183300:CDS | 25.0% |
| ! | CAATTCAATAACCAAATACT+TGG | + | chr1_4:72166990-72167009 | None:intergenic | 25.0% |
| !!! | ACATTTTGCTTTTACTATAG+TGG | - | chr1_4:72167055-72167074 | Msa0183300:intron | 25.0% |
| ! | TTTCTTATCCATCATCAATA+AGG | + | chr1_4:72167674-72167693 | None:intergenic | 25.0% |
| ! | TGGGAATTAAAAATGTGATA+AGG | - | chr1_4:72167716-72167735 | Msa0183300:CDS | 25.0% |
| !!! | CTATGATTGTGCTTATTTTA+TGG | + | chr1_4:72167796-72167815 | None:intergenic | 25.0% |
| ! | AATATGCCAATAGGAATAAA+GGG | + | chr1_4:72168397-72168416 | None:intergenic | 25.0% |
| ! | TAATATGCCAATAGGAATAA+AGG | + | chr1_4:72168398-72168417 | None:intergenic | 25.0% |
| ! | ATAGTGATTAATATGCCAAT+AGG | + | chr1_4:72168406-72168425 | None:intergenic | 25.0% |
| ! | TCTTATTACCTTAGATTAAG+AGG | - | chr1_4:72168521-72168540 | Msa0183300:intron | 25.0% |
| ! | AAATTAGACCTCTTAATCTA+AGG | + | chr1_4:72168532-72168551 | None:intergenic | 25.0% |
| ! | TTTATGTAATATGAGTAAGG+TGG | - | chr1_4:72168588-72168607 | Msa0183300:intron | 25.0% |
| ! | GATTACCAAATTAAGGAAAA+GGG | + | chr1_4:72168757-72168776 | None:intergenic | 25.0% |
| ! | AGATTACCAAATTAAGGAAA+AGG | + | chr1_4:72168758-72168777 | None:intergenic | 25.0% |
| ! | AACCAAAATTACCAGAATAA+GGG | + | chr1_4:72168813-72168832 | None:intergenic | 25.0% |
| ! | AAACCAAAATTACCAGAATA+AGG | + | chr1_4:72168814-72168833 | None:intergenic | 25.0% |
| ! | AATAAATGTCTCATAATGCT+TGG | - | chr1_4:72168893-72168912 | Msa0183300:CDS | 25.0% |
| !!! | TGATTCTTCATTTTTCTTTG+GGG | - | chr1_4:72168942-72168961 | Msa0183300:CDS | 25.0% |
| !!! | TACTAGTTCTACATTAAAGA+TGG | + | chr1_4:72169060-72169079 | None:intergenic | 25.0% |
| ! | TGTACCAACTGTAATTTATT+AGG | - | chr1_4:72169495-72169514 | Msa0183300:intron | 25.0% |
| ! | TAAAGAAAAATACAGGAGAA+TGG | + | chr1_4:72169575-72169594 | None:intergenic | 25.0% |
| !! | AATCCTCTAAAGAAAAATAC+AGG | + | chr1_4:72169582-72169601 | None:intergenic | 25.0% |
| !! | ATGAATTTTGTCTTCTGTTT+TGG | - | chr1_4:72169879-72169898 | Msa0183300:intron | 25.0% |
| ! | TGCATTATTATGTGAGAATT+TGG | - | chr1_4:72170105-72170124 | Msa0183300:CDS | 25.0% |
| !! | TTCAATTCTCTTTCTTTTCT+TGG | - | chr1_4:72170258-72170277 | Msa0183300:intron | 25.0% |
| ! | TACAACTGTTAATAATATGG+GGG | + | chr1_4:72170954-72170973 | None:intergenic | 25.0% |
| ! | GTCCGTCATAAATATAATAA+AGG | - | chr1_4:72171262-72171281 | Msa0183300:intron | 25.0% |
| ! | CCAAAAGTAAAAAATGGTAT+AGG | + | chr1_4:72171363-72171382 | None:intergenic | 25.0% |
| !!! | CCTATACCATTTTTTACTTT+TGG | - | chr1_4:72171360-72171379 | Msa0183300:intron | 25.0% |
| !!! | TACCATTTTTTACTTTTGGT+TGG | - | chr1_4:72171364-72171383 | Msa0183300:intron | 25.0% |
| !!! | ACCATTTTTTACTTTTGGTT+GGG | - | chr1_4:72171365-72171384 | Msa0183300:intron | 25.0% |
| AAAACGAAGAAGAATTGGAT+CGG | + | chr1_4:72164737-72164756 | None:intergenic | 30.0% | |
| ATCGAAAAACGAAGAAGAAT+TGG | + | chr1_4:72164742-72164761 | None:intergenic | 30.0% | |
| !!! | GAAGTATGGTTTTAAGAGAT+CGG | + | chr1_4:72164799-72164818 | None:intergenic | 30.0% |
| ! | ATTGGATCAAACCAGATTTT+TGG | - | chr1_4:72164885-72164904 | Msa0183300:three_prime_UTR | 30.0% |
| ACTTAATCCATCCAAAAATC+TGG | + | chr1_4:72164899-72164918 | None:intergenic | 30.0% | |
| ! | AAGTAAACTGATTCAGAGAT+CGG | + | chr1_4:72164945-72164964 | None:intergenic | 30.0% |
| !! | GATTGTTTGAAGTTCTAAGA+TGG | - | chr1_4:72165402-72165421 | Msa0183300:intron | 30.0% |
| ! | AGTGTGACTAAATTTTACGT+TGG | - | chr1_4:72165834-72165853 | Msa0183300:intron | 30.0% |
| GAGATTGTCAATATTCGTTT+AGG | - | chr1_4:72165885-72165904 | Msa0183300:CDS | 30.0% | |
| ACTATTGATCAGGTATTTGA+AGG | - | chr1_4:72166232-72166251 | Msa0183300:intron | 30.0% | |
| CAATGAAATTTGGATTATGC+AGG | - | chr1_4:72166423-72166442 | Msa0183300:intron | 30.0% | |
| TTCTTTATCATTATCTGGGA+CGG | + | chr1_4:72166595-72166614 | None:intergenic | 30.0% | |
| TTGCATGTCATCTTGATTAA+TGG | - | chr1_4:72166680-72166699 | Msa0183300:intron | 30.0% | |
| !! | ATTCTATTAGTTTGTTCTGG+AGG | - | chr1_4:72166901-72166920 | Msa0183300:CDS | 30.0% |
| !! | TTCTATTAGTTTGTTCTGGA+GGG | - | chr1_4:72166902-72166921 | Msa0183300:CDS | 30.0% |
| !!! | TCCTTTAAATTGGTTTTGCT+CGG | - | chr1_4:72167023-72167042 | Msa0183300:intron | 30.0% |
| ! | CTCTTGAATTGTATGACTTT+TGG | - | chr1_4:72167614-72167633 | Msa0183300:CDS | 30.0% |
| ATTGTGATCTGTGTTTCATT+TGG | - | chr1_4:72167643-72167662 | Msa0183300:CDS | 30.0% | |
| ! | TGGATTTTCCTTATTGATGA+TGG | - | chr1_4:72167663-72167682 | Msa0183300:CDS | 30.0% |
| CAGTCAAAATGAAGAAGAAA+GGG | + | chr1_4:72168080-72168099 | None:intergenic | 30.0% | |
| ACAGTCAAAATGAAGAAGAA+AGG | + | chr1_4:72168081-72168100 | None:intergenic | 30.0% | |
| AGTTTCTACATAAGAGTTGT+CGG | + | chr1_4:72168442-72168461 | None:intergenic | 30.0% | |
| TATAAGCAATATCACAAGTG+AGG | + | chr1_4:72168486-72168505 | None:intergenic | 30.0% | |
| ACCAAAATTACCAGAATAAG+GGG | + | chr1_4:72168812-72168831 | None:intergenic | 30.0% | |
| TTCAACAATCAATACTGGTA+AGG | + | chr1_4:72168854-72168873 | None:intergenic | 30.0% | |
| !! | TACCAGTATTGATTGTTGAA+TGG | - | chr1_4:72168854-72168873 | Msa0183300:CDS | 30.0% |
| !! | TTCATTTTTCTTTGGGGATT+GGG | - | chr1_4:72168948-72168967 | Msa0183300:CDS | 30.0% |
| ! | ATGTCTGTACAATTGCTATT+GGG | - | chr1_4:72169319-72169338 | Msa0183300:intron | 30.0% |
| GTGATAATACGTTCAATTGT+AGG | + | chr1_4:72169365-72169384 | None:intergenic | 30.0% | |
| AGAATGGTAAAAGCAGTAAA+AGG | + | chr1_4:72169559-72169578 | None:intergenic | 30.0% | |
| ! | TCTCCTGTATTTTTCTTTAG+AGG | - | chr1_4:72169576-72169595 | Msa0183300:intron | 30.0% |
| AGATCTGTATACATATAACC+AGG | + | chr1_4:72169762-72169781 | None:intergenic | 30.0% | |
| CATGGTTAGAATTGGAATTT+GGG | + | chr1_4:72169838-72169857 | None:intergenic | 30.0% | |
| !! | TGTCTTCTGTTTTGGATAAA+AGG | - | chr1_4:72169887-72169906 | Msa0183300:intron | 30.0% |
| TGATCTTACCGGATATATTA+CGG | - | chr1_4:72169981-72170000 | Msa0183300:intron | 30.0% | |
| AACTAATCCAACATGGTTTA+TGG | + | chr1_4:72170083-72170102 | None:intergenic | 30.0% | |
| !! | ATTGGCTTGTGTTATATAGT+GGG | - | chr1_4:72170193-72170212 | Msa0183300:intron | 30.0% |
| ! | TTGTGTTATATAGTGGGATT+CGG | - | chr1_4:72170199-72170218 | Msa0183300:intron | 30.0% |
| !! | GGTATTCTCTCTGAAAATTT+TGG | - | chr1_4:72170220-72170239 | Msa0183300:intron | 30.0% |
| CAGGGATCATATATATTTCA+TGG | + | chr1_4:72170345-72170364 | None:intergenic | 30.0% | |
| CAATCTCATACAATTCATCA+GGG | + | chr1_4:72170363-72170382 | None:intergenic | 30.0% | |
| TAATGCTTAGAATGTTTACC+AGG | + | chr1_4:72170407-72170426 | None:intergenic | 30.0% | |
| ACACTCTAATGATGTATCAT+TGG | - | chr1_4:72170582-72170601 | Msa0183300:intron | 30.0% | |
| AGAGAAAATTAGTAGATACC+AGG | + | chr1_4:72170870-72170889 | None:intergenic | 30.0% | |
| GTTTCATTAATACCACTTCA+AGG | + | chr1_4:72170924-72170943 | None:intergenic | 30.0% | |
| ATAGGAATCACAACATCTAT+GGG | + | chr1_4:72171345-72171364 | None:intergenic | 30.0% | |
| TATAGGAATCACAACATCTA+TGG | + | chr1_4:72171346-72171365 | None:intergenic | 30.0% | |
| TAATAAGGATAGTTGTCACT+TGG | - | chr1_4:72171510-72171529 | Msa0183300:intron | 30.0% | |
| ACGAACAGATAAATACATCA+AGG | + | chr1_4:72171542-72171561 | None:intergenic | 30.0% | |
| !!! | TGAAACAAGCTTTTTTAGTC+TGG | - | chr1_4:72171583-72171602 | Msa0183300:intron | 30.0% |
| !!! | GAAACAAGCTTTTTTAGTCT+GGG | - | chr1_4:72171584-72171603 | Msa0183300:intron | 30.0% |
| !!! | AAACAAGCTTTTTTAGTCTG+GGG | - | chr1_4:72171585-72171604 | Msa0183300:intron | 30.0% |
| !!! | AAAAGTGGCTTTGGTTTTAT+AGG | - | chr1_4:72171616-72171635 | Msa0183300:intron | 30.0% |
| CTCCGAATTGTTAATTAGTT+TGG | - | chr1_4:72171645-72171664 | Msa0183300:intron | 30.0% | |
| TATCCATAATTCTCTCTGTA+TGG | - | chr1_4:72171668-72171687 | Msa0183300:five_prime_UTR | 30.0% | |
| !!! | CGATTTTTTGTGATCAGAGA+GGG | + | chr1_4:72164676-72164695 | None:intergenic | 35.0% |
| !!! | TCGATTTTTTGTGATCAGAG+AGG | + | chr1_4:72164677-72164696 | None:intergenic | 35.0% |
| CCAATTGAACTCAGAAACAA+TGG | + | chr1_4:72164870-72164889 | None:intergenic | 35.0% | |
| !! | CCATTGTTTCTGAGTTCAAT+TGG | - | chr1_4:72164867-72164886 | Msa0183300:three_prime_UTR | 35.0% |
| !! | GATCAAACCAGATTTTTGGA+TGG | - | chr1_4:72164889-72164908 | Msa0183300:three_prime_UTR | 35.0% |
| ! | TGTTTAGTTTCGATTCACTG+TGG | - | chr1_4:72164991-72165010 | Msa0183300:three_prime_UTR | 35.0% |
| ! | CAAGTCTTATCCTACTAAGT+GGG | + | chr1_4:72165297-72165316 | None:intergenic | 35.0% |
| TCCATCAATCATTAAGACAG+CGG | + | chr1_4:72165342-72165361 | None:intergenic | 35.0% | |
| ACGAATACCATGAGTTATCA+AGG | + | chr1_4:72165636-72165655 | None:intergenic | 35.0% | |
| ACTTTCTCAAGAATGACCAA+TGG | + | chr1_4:72165745-72165764 | None:intergenic | 35.0% | |
| ! | AGGTATTTGAAGGTACATCT+GGG | - | chr1_4:72166242-72166261 | Msa0183300:intron | 35.0% |
| AAAACACATAATTGAGCCGA+TGG | - | chr1_4:72166531-72166550 | Msa0183300:CDS | 35.0% | |
| TTAAAAGGATAGCCAACCAT+CGG | + | chr1_4:72166550-72166569 | None:intergenic | 35.0% | |
| ACATGTAAACCTAGAAACTG+TGG | - | chr1_4:72166789-72166808 | Msa0183300:intron | 35.0% | |
| TTTCAGTTTCCACAGTTTCT+AGG | + | chr1_4:72166801-72166820 | None:intergenic | 35.0% | |
| !! | TCTATTAGTTTGTTCTGGAG+GGG | - | chr1_4:72166903-72166922 | Msa0183300:CDS | 35.0% |
| AATACTTGGCTAAATTGCAG+AGG | + | chr1_4:72166976-72166995 | None:intergenic | 35.0% | |
| CTGCAATTTAGCCAAGTATT+TGG | - | chr1_4:72166976-72166995 | Msa0183300:CDS | 35.0% | |
| CTACGGATATAAACAAGAGA+GGG | + | chr1_4:72167109-72167128 | None:intergenic | 35.0% | |
| ! | ACAGGAGTTTTTAACACCTA+CGG | + | chr1_4:72167126-72167145 | None:intergenic | 35.0% |
| GTTAAAAACTCCTGTATCAC+TGG | - | chr1_4:72167131-72167150 | Msa0183300:intron | 35.0% | |
| ATGCTTGGTCGGATATTTAA+CGG | - | chr1_4:72167156-72167175 | Msa0183300:intron | 35.0% | |
| TCTGGAAAACCAATTGACAA+TGG | - | chr1_4:72167180-72167199 | Msa0183300:intron | 35.0% | |
| AAGTAAGCCTCAGGTAAAAT+TGG | + | chr1_4:72167210-72167229 | None:intergenic | 35.0% | |
| ! | AATTTTACCTGAGGCTTACT+TGG | - | chr1_4:72167209-72167228 | Msa0183300:intron | 35.0% |
| ACTGCATGTTTGTTTATGTC+TGG | - | chr1_4:72167267-72167286 | Msa0183300:intron | 35.0% | |
| GTCATGAATTCTATTGCTAG+AGG | - | chr1_4:72167402-72167421 | Msa0183300:intron | 35.0% | |
| TGTGCAGCAATTTCATTATG+GGG | + | chr1_4:72167462-72167481 | None:intergenic | 35.0% | |
| CTGTGCAGCAATTTCATTAT+GGG | + | chr1_4:72167463-72167482 | None:intergenic | 35.0% | |
| TCTGTGCAGCAATTTCATTA+TGG | + | chr1_4:72167464-72167483 | None:intergenic | 35.0% | |
| GAAGTCTGATAATCTTCTTG+AGG | - | chr1_4:72167518-72167537 | Msa0183300:intron | 35.0% | |
| !! | TTTGACTACTTTTGCAAAGG+TGG | + | chr1_4:72167773-72167792 | None:intergenic | 35.0% |
| !! | TGGTTTGACTACTTTTGCAA+AGG | + | chr1_4:72167776-72167795 | None:intergenic | 35.0% |
| CACAATCATAGTTGTCAAAG+CGG | - | chr1_4:72167805-72167824 | Msa0183300:intron | 35.0% | |
| GGAAGAAGTGAAAGATTGAT+TGG | + | chr1_4:72168059-72168078 | None:intergenic | 35.0% | |
| ! | AGAACAGAGATGAGATTTTG+TGG | - | chr1_4:72168122-72168141 | Msa0183300:intron | 35.0% |
| TTAGCACCCTTTATTCCTAT+TGG | - | chr1_4:72168388-72168407 | Msa0183300:intron | 35.0% | |
| ! | AGTGACCCTTTTCCTTAATT+TGG | - | chr1_4:72168749-72168768 | Msa0183300:intron | 35.0% |
| TCTTTAATTCCCCCTTATTC+TGG | - | chr1_4:72168799-72168818 | Msa0183300:intron | 35.0% | |
| CCAAAATTACCAGAATAAGG+GGG | + | chr1_4:72168811-72168830 | None:intergenic | 35.0% | |
| AGCCATTCAACAATCAATAC+TGG | + | chr1_4:72168859-72168878 | None:intergenic | 35.0% | |
| !! | CTTCATTTTTCTTTGGGGAT+TGG | - | chr1_4:72168947-72168966 | Msa0183300:CDS | 35.0% |
| !! | TCATTTTTCTTTGGGGATTG+GGG | - | chr1_4:72168949-72168968 | Msa0183300:CDS | 35.0% |
| GTACAGACATGTAAGAAACA+GGG | + | chr1_4:72169309-72169328 | None:intergenic | 35.0% | |
| TGTACAGACATGTAAGAAAC+AGG | + | chr1_4:72169310-72169329 | None:intergenic | 35.0% | |
| CATGTCTGTACAATTGCTAT+TGG | - | chr1_4:72169318-72169337 | Msa0183300:intron | 35.0% | |
| ! | TTGCTATTGGGATTTACTGT+AGG | - | chr1_4:72169331-72169350 | Msa0183300:intron | 35.0% |
| TCTTACTACTGCTGAATATC+TGG | - | chr1_4:72169397-72169416 | Msa0183300:intron | 35.0% | |
| GCATGGTTAGAATTGGAATT+TGG | + | chr1_4:72169839-72169858 | None:intergenic | 35.0% | |
| TCATTTGGCATGGTTAGAAT+TGG | + | chr1_4:72169846-72169865 | None:intergenic | 35.0% | |
| ATTCTAACCATGCCAAATGA+TGG | - | chr1_4:72169846-72169865 | Msa0183300:intron | 35.0% | |
| TTCTTTACCATCATTTGGCA+TGG | + | chr1_4:72169856-72169875 | None:intergenic | 35.0% | |
| GTAATATATCCGGTAAGATC+AGG | + | chr1_4:72169982-72170001 | None:intergenic | 35.0% | |
| ATGAATGCCATAAACCATGT+TGG | - | chr1_4:72170073-72170092 | Msa0183300:CDS | 35.0% | |
| !! | CATTGGCTTGTGTTATATAG+TGG | - | chr1_4:72170192-72170211 | Msa0183300:intron | 35.0% |
| CCAATCTCATACAATTCATC+AGG | + | chr1_4:72170364-72170383 | None:intergenic | 35.0% | |
| CCTGATGAATTGTATGAGAT+TGG | - | chr1_4:72170361-72170380 | Msa0183300:intron | 35.0% | |
| ! | ATGGAAGAACATTGATTGGT+GGG | + | chr1_4:72170465-72170484 | None:intergenic | 35.0% |
| ! | AGTGATGGAAGAACATTGAT+TGG | + | chr1_4:72170469-72170488 | None:intergenic | 35.0% |
| ATGTTCTTCCATCACTATCT+CGG | - | chr1_4:72170473-72170492 | Msa0183300:CDS | 35.0% | |
| GATTTCAAAGTTCTGTCAAG+TGG | - | chr1_4:72170523-72170542 | Msa0183300:intron | 35.0% | |
| CTGTATGCAAATTATGCCAT+TGG | - | chr1_4:72170787-72170806 | Msa0183300:intron | 35.0% | |
| TGCAAATTATGCCATTGGAA+AGG | - | chr1_4:72170792-72170811 | Msa0183300:intron | 35.0% | |
| TAGTGAAATTGTCCTTGAAG+TGG | - | chr1_4:72170909-72170928 | Msa0183300:CDS | 35.0% | |
| ! | ACAGTTGTATCTGGAATTTC+TGG | - | chr1_4:72170965-72170984 | Msa0183300:intron | 35.0% |
| ! | AATTTCTGGACAAGTTTGAG+AGG | - | chr1_4:72170979-72170998 | Msa0183300:intron | 35.0% |
| TAGAGACTGGAATATATTGC+GGG | + | chr1_4:72171033-72171052 | None:intergenic | 35.0% | |
| CTAGAGACTGGAATATATTG+CGG | + | chr1_4:72171034-72171053 | None:intergenic | 35.0% | |
| TATACGATGAAGAAGTTCAC+GGG | + | chr1_4:72171087-72171106 | None:intergenic | 35.0% | |
| GTATACGATGAAGAAGTTCA+CGG | + | chr1_4:72171088-72171107 | None:intergenic | 35.0% | |
| ATCATCAATTACCAGCATCT+CGG | + | chr1_4:72171139-72171158 | None:intergenic | 35.0% | |
| AATCAATTGCCCATGACATT+AGG | + | chr1_4:72171205-72171224 | None:intergenic | 35.0% | |
| GCCCAACCAAAAGTAAAAAA+TGG | + | chr1_4:72171369-72171388 | None:intergenic | 35.0% | |
| GAAACAAGCAAACATACACT+GGG | + | chr1_4:72171448-72171467 | None:intergenic | 35.0% | |
| TGAAACAAGCAAACATACAC+TGG | + | chr1_4:72171449-72171468 | None:intergenic | 35.0% | |
| CTAATTAACAATTCGGAGCT+TGG | + | chr1_4:72171643-72171662 | None:intergenic | 35.0% | |
| AAAATCGAAAACCACAGCAC+AGG | - | chr1_4:72164689-72164708 | Msa0183300:three_prime_UTR | 40.0% | |
| AATTGTGGAACCCACTTAGT+AGG | - | chr1_4:72165284-72165303 | Msa0183300:CDS | 40.0% | |
| ! | CCAAGTCTTATCCTACTAAG+TGG | + | chr1_4:72165298-72165317 | None:intergenic | 40.0% |
| CCACTTAGTAGGATAAGACT+TGG | - | chr1_4:72165295-72165314 | Msa0183300:CDS | 40.0% | |
| CCATCAATCATTAAGACAGC+GGG | + | chr1_4:72165341-72165360 | None:intergenic | 40.0% | |
| !! | TTGAAGTTCTAAGATGGGTG+TGG | - | chr1_4:72165408-72165427 | Msa0183300:intron | 40.0% |
| !! | ACGTGTCTTATTGGTTTACG+TGG | - | chr1_4:72165481-72165500 | Msa0183300:intron | 40.0% |
| ! | GCATGTTAATTTTCCCCTGT+GGG | - | chr1_4:72165503-72165522 | Msa0183300:intron | 40.0% |
| TATGTATACACACACCCACA+GGG | + | chr1_4:72165520-72165539 | None:intergenic | 40.0% | |
| ! | CAATCTGCCTTGATAACTCA+TGG | - | chr1_4:72165626-72165645 | Msa0183300:intron | 40.0% |
| GGTCATTCTTGAGAAAGTGA+AGG | - | chr1_4:72165747-72165766 | Msa0183300:intron | 40.0% | |
| GTCAATATTCGTTTAGGCGA+TGG | - | chr1_4:72165891-72165910 | Msa0183300:CDS | 40.0% | |
| ATGATGGTTATGCATGCTGA+AGG | + | chr1_4:72165979-72165998 | None:intergenic | 40.0% | |
| AAGAATGCTACTCAGAAGCT+CGG | + | chr1_4:72166079-72166098 | None:intergenic | 40.0% | |
| ! | CAGGTATTTGAAGGTACATC+TGG | - | chr1_4:72166241-72166260 | Msa0183300:intron | 40.0% |
| TTTACGACCGTACAGTTTAC+TGG | - | chr1_4:72166277-72166296 | Msa0183300:intron | 40.0% | |
| TACCTCTCCAGTAAACTGTA+CGG | + | chr1_4:72166287-72166306 | None:intergenic | 40.0% | |
| GGTAGCAGTAGCAGTTTAAA+AGG | + | chr1_4:72166565-72166584 | None:intergenic | 40.0% | |
| ! | ATTATCTGGGACGGTTTAGT+AGG | + | chr1_4:72166586-72166605 | None:intergenic | 40.0% |
| GCTTAGGGGATAGTTACAAT+TGG | + | chr1_4:72166625-72166644 | None:intergenic | 40.0% | |
| ATCTGCTTAGAAAATAGGGG+AGG | - | chr1_4:72166827-72166846 | Msa0183300:intron | 40.0% | |
| !! | CTATTAGTTTGTTCTGGAGG+GGG | - | chr1_4:72166904-72166923 | Msa0183300:CDS | 40.0% |
| GCCGAGCAAAACCAATTTAA+AGG | + | chr1_4:72167027-72167046 | None:intergenic | 40.0% | |
| CCTACGGATATAAACAAGAG+AGG | + | chr1_4:72167110-72167129 | None:intergenic | 40.0% | |
| ! | CCTCTCTTGTTTATATCCGT+AGG | - | chr1_4:72167107-72167126 | Msa0183300:intron | 40.0% |
| TAAGCCTCAGGTAAAATTGG+CGG | + | chr1_4:72167207-72167226 | None:intergenic | 40.0% | |
| GATATATCCAAGTAAGCCTC+AGG | + | chr1_4:72167219-72167238 | None:intergenic | 40.0% | |
| GAGGCTTACTTGGATATATC+AGG | - | chr1_4:72167219-72167238 | Msa0183300:intron | 40.0% | |
| AATTTCATTATGGGGGAGAC+CGG | + | chr1_4:72167454-72167473 | None:intergenic | 40.0% | |
| GTGCAGCAATTTCATTATGG+GGG | + | chr1_4:72167461-72167480 | None:intergenic | 40.0% | |
| GATTGGAGATCTAGAGATCT+AGG | + | chr1_4:72168042-72168061 | None:intergenic | 40.0% | |
| !!! | TGCCATTGTTTTTGCAGCTA+TGG | - | chr1_4:72168662-72168681 | Msa0183300:intron | 40.0% |
| !!! | GCCATTGTTTTTGCAGCTAT+GGG | - | chr1_4:72168663-72168682 | Msa0183300:intron | 40.0% |
| TCCCATAGCTGCAAAAACAA+TGG | + | chr1_4:72168667-72168686 | None:intergenic | 40.0% | |
| !!! | GTTTTTCAAGCGTGACTTTG+AGG | - | chr1_4:72168707-72168726 | Msa0183300:intron | 40.0% |
| ! | CCCCCTTATTCTGGTAATTT+TGG | - | chr1_4:72168808-72168827 | Msa0183300:intron | 40.0% |
| !! | CATTTTTCTTTGGGGATTGG+GGG | - | chr1_4:72168950-72168969 | Msa0183300:CDS | 40.0% |
| !! | ACTTCGCATGTGTTTGGTTT+TGG | + | chr1_4:72169096-72169115 | None:intergenic | 40.0% |
| GAATATCTGGCGTATGAATG+TGG | - | chr1_4:72169410-72169429 | Msa0183300:intron | 40.0% | |
| CTGTAGGATCAAGAACAAGA+AGG | + | chr1_4:72169697-72169716 | None:intergenic | 40.0% | |
| CTTCTTGTTCTTGATCCTAC+AGG | - | chr1_4:72169695-72169714 | Msa0183300:intron | 40.0% | |
| GCAACAATTTATGAACGTGC+CGG | - | chr1_4:72169783-72169802 | Msa0183300:intron | 40.0% | |
| TCTTACCGGATATATTACGG+AGG | - | chr1_4:72169984-72170003 | Msa0183300:intron | 40.0% | |
| CTTACCGGATATATTACGGA+GGG | - | chr1_4:72169985-72170004 | Msa0183300:intron | 40.0% | |
| TTACCGGATATATTACGGAG+GGG | - | chr1_4:72169986-72170005 | Msa0183300:intron | 40.0% | |
| TAGGCAGTTGCATAATAGAC+AGG | - | chr1_4:72170023-72170042 | Msa0183300:intron | 40.0% | |
| CAGTTGCATAATAGACAGGT+GGG | - | chr1_4:72170027-72170046 | Msa0183300:intron | 40.0% | |
| ATGCAGCAACTAATCCAACA+TGG | + | chr1_4:72170090-72170109 | None:intergenic | 40.0% | |
| TACAATCAGTCTAAGTGACC+TGG | - | chr1_4:72170386-72170405 | Msa0183300:intron | 40.0% | |
| ! | GATGGAAGAACATTGATTGG+TGG | + | chr1_4:72170466-72170485 | None:intergenic | 40.0% |
| TTCATCAACCGAGATAGTGA+TGG | + | chr1_4:72170484-72170503 | None:intergenic | 40.0% | |
| !! | ATCACTATCTCGGTTGATGA+AGG | - | chr1_4:72170483-72170502 | Msa0183300:CDS | 40.0% |
| !! | AGAAGAAGCACTTTCATCTG+AGG | - | chr1_4:72170843-72170862 | Msa0183300:intron | 40.0% |
| ATACGATGAAGAAGTTCACG+GGG | + | chr1_4:72171086-72171105 | None:intergenic | 40.0% | |
| GTAAAACTGGTCAAGAGTCT+TGG | + | chr1_4:72171114-72171133 | None:intergenic | 40.0% | |
| !! | TATGACGGACAGAACAAATG+TGG | + | chr1_4:72171252-72171271 | None:intergenic | 40.0% |
| ! | TCCTTTTGGACTAACTGAAC+AGG | + | chr1_4:72171319-72171338 | None:intergenic | 40.0% |
| ! | ACATCTATGGGTTCTCCTTT+TGG | + | chr1_4:72171333-72171352 | None:intergenic | 40.0% |
| TACTTGTGTTGCACACAGTT+TGG | - | chr1_4:72171396-72171415 | Msa0183300:intron | 40.0% | |
| ACTTGTGTTGCACACAGTTT+GGG | - | chr1_4:72171397-72171416 | Msa0183300:intron | 40.0% | |
| ! | TTTGGGATGGTTGGAATTTG+TGG | - | chr1_4:72171414-72171433 | Msa0183300:intron | 40.0% |
| !!! | CTTTTTTAGTCTGGGGAATC+TGG | - | chr1_4:72171592-72171611 | Msa0183300:intron | 40.0% |
| GCACCATACAGAGAGAATTA+TGG | + | chr1_4:72171674-72171693 | None:intergenic | 40.0% | |
| ATTCTCTCTGTATGGTGCTT+TGG | - | chr1_4:72171676-72171695 | Msa0183300:five_prime_UTR | 40.0% | |
| TTGTGATCAGAGAGGGAGAT+GGG | + | chr1_4:72164669-72164688 | None:intergenic | 45.0% | |
| TTTGTGATCAGAGAGGGAGA+TGG | + | chr1_4:72164670-72164689 | None:intergenic | 45.0% | |
| CCCGCTGTCTTAATGATTGA+TGG | - | chr1_4:72165338-72165357 | Msa0183300:CDS | 45.0% | |
| AATGCTAGCGACAATGACGA+CGG | - | chr1_4:72165436-72165455 | Msa0183300:intron | 45.0% | |
| GGAATGGGTACGTGTCTTAT+TGG | - | chr1_4:72165472-72165491 | Msa0183300:intron | 45.0% | |
| ! | GGCATGTTAATTTTCCCCTG+TGG | - | chr1_4:72165502-72165521 | Msa0183300:intron | 45.0% |
| ATGTATACACACACCCACAG+GGG | + | chr1_4:72165519-72165538 | None:intergenic | 45.0% | |
| CTATGTATACACACACCCAC+AGG | + | chr1_4:72165521-72165540 | None:intergenic | 45.0% | |
| ACAGAATACAGGACTGTGTC+TGG | - | chr1_4:72165709-72165728 | Msa0183300:CDS | 45.0% | |
| CTCAAGAATGACCAATGGTC+CGG | + | chr1_4:72165740-72165759 | None:intergenic | 45.0% | |
| TTACGTTGGTCAACTGCATC+AGG | - | chr1_4:72165848-72165867 | Msa0183300:intron | 45.0% | |
| TACGTTGGTCAACTGCATCA+GGG | - | chr1_4:72165849-72165868 | Msa0183300:intron | 45.0% | |
| TAGGAGGCAAGTACAGATGA+TGG | + | chr1_4:72165995-72166014 | None:intergenic | 45.0% | |
| AATAAAGCAGACAGCGATGG+AGG | + | chr1_4:72166112-72166131 | None:intergenic | 45.0% | |
| GTGAATAAAGCAGACAGCGA+TGG | + | chr1_4:72166115-72166134 | None:intergenic | 45.0% | |
| CACATAATTGAGCCGATGGT+TGG | - | chr1_4:72166535-72166554 | Msa0183300:CDS | 45.0% | |
| !! | AGCAGTTTTGGCATGCTTAG+GGG | + | chr1_4:72166639-72166658 | None:intergenic | 45.0% |
| !! | CAGCAGTTTTGGCATGCTTA+GGG | + | chr1_4:72166640-72166659 | None:intergenic | 45.0% |
| !! | ACAGCAGTTTTGGCATGCTT+AGG | + | chr1_4:72166641-72166660 | None:intergenic | 45.0% |
| ! | AAGGGGGATAACAGCAGTTT+TGG | + | chr1_4:72166651-72166670 | None:intergenic | 45.0% |
| ACATGCAACACAGTCTGAAG+GGG | + | chr1_4:72166668-72166687 | None:intergenic | 45.0% | |
| GACATGCAACACAGTCTGAA+GGG | + | chr1_4:72166669-72166688 | None:intergenic | 45.0% | |
| TGACATGCAACACAGTCTGA+AGG | + | chr1_4:72166670-72166689 | None:intergenic | 45.0% | |
| ATTGCAGAGGAACAGAGGAT+GGG | + | chr1_4:72166963-72166982 | None:intergenic | 45.0% | |
| AATTGCAGAGGAACAGAGGA+TGG | + | chr1_4:72166964-72166983 | None:intergenic | 45.0% | |
| GCTAAATTGCAGAGGAACAG+AGG | + | chr1_4:72166968-72166987 | None:intergenic | 45.0% | |
| TATCACTGGACATGCTTGGT+CGG | - | chr1_4:72167145-72167164 | Msa0183300:intron | 45.0% | |
| GGTCGGATATTTAACGGTTC+TGG | - | chr1_4:72167162-72167181 | Msa0183300:intron | 45.0% | |
| ! | ATTGGCGGACCATTGTCAAT+TGG | + | chr1_4:72167192-72167211 | None:intergenic | 45.0% |
| TCCAGTCTGTATCATCTCCT+CGG | + | chr1_4:72167367-72167386 | None:intergenic | 45.0% | |
| ! | ATCCCTCTATTTTCAGCTGC+CGG | - | chr1_4:72167432-72167451 | Msa0183300:intron | 45.0% |
| ! | TGATAAGGTTACAGCGCTGA+AGG | - | chr1_4:72167731-72167750 | Msa0183300:intron | 45.0% |
| TAGTTGTCAAAGCGGAAACG+CGG | - | chr1_4:72167813-72167832 | Msa0183300:intron | 45.0% | |
| AGGCAAAAGCGGAACAAAAG+CGG | + | chr1_4:72168224-72168243 | None:intergenic | 45.0% | |
| TTGTCAATAGCGGTCTAACG+CGG | + | chr1_4:72168312-72168331 | None:intergenic | 45.0% | |
| GTGCTCTCTGTTGTCAATAG+CGG | + | chr1_4:72168322-72168341 | None:intergenic | 45.0% | |
| TGCAGCTATGGGAGTTAACA+TGG | - | chr1_4:72168674-72168693 | Msa0183300:intron | 45.0% | |
| ! | AAGCGTGACTTTGAGGAGAA+CGG | - | chr1_4:72168714-72168733 | Msa0183300:intron | 45.0% |
| ACCAAACACATGCGAAGTGT+AGG | - | chr1_4:72169098-72169117 | Msa0183300:intron | 45.0% | |
| CCAAACACATGCGAAGTGTA+GGG | - | chr1_4:72169099-72169118 | Msa0183300:intron | 45.0% | |
| GCAGTAGTAAGAGCAATACG+AGG | + | chr1_4:72169389-72169408 | None:intergenic | 45.0% | |
| TTATGCTGATGCTCTTCGTG+AGG | - | chr1_4:72169469-72169488 | Msa0183300:intron | 45.0% | |
| TTTACGCCCCTCAATTCTTC+CGG | + | chr1_4:72169805-72169824 | None:intergenic | 45.0% | |
| CATCCAACTCCTGATCTTAC+CGG | - | chr1_4:72169970-72169989 | Msa0183300:intron | 45.0% | |
| TATCCGGTAAGATCAGGAGT+TGG | + | chr1_4:72169976-72169995 | None:intergenic | 45.0% | |
| AGGGGCAGATATACATCGAT+AGG | - | chr1_4:72170004-72170023 | Msa0183300:intron | 45.0% | |
| GCAGTTGCATAATAGACAGG+TGG | - | chr1_4:72170026-72170045 | Msa0183300:intron | 45.0% | |
| TCATTCTGATGTGTCCAACC+AGG | - | chr1_4:72170649-72170668 | Msa0183300:intron | 45.0% | |
| CAAACAAGAAGAGACCTGGT+TGG | + | chr1_4:72170666-72170685 | None:intergenic | 45.0% | |
| GGAACAAACAAGAAGAGACC+TGG | + | chr1_4:72170670-72170689 | None:intergenic | 45.0% | |
| CAACAACAGCTTTCATTGCC+TGG | + | chr1_4:72170822-72170841 | None:intergenic | 45.0% | |
| CAGGCAATGAAAGCTGTTGT+TGG | - | chr1_4:72170820-72170839 | Msa0183300:intron | 45.0% | |
| ! | GAATATATTGCGGGTGTCGT+AGG | + | chr1_4:72171024-72171043 | None:intergenic | 45.0% |
| TCCAGTCTCTAGATCTTGCA+TGG | - | chr1_4:72171042-72171061 | Msa0183300:intron | 45.0% | |
| TCCATGCAAGATCTAGAGAC+TGG | + | chr1_4:72171046-72171065 | None:intergenic | 45.0% | |
| ATCTTGCATGGACCTTACTC+CGG | - | chr1_4:72171054-72171073 | Msa0183300:intron | 45.0% | |
| TACGATGAAGAAGTTCACGG+GGG | + | chr1_4:72171085-72171104 | None:intergenic | 45.0% | |
| TCAATCAGCGCCTAATGTCA+TGG | - | chr1_4:72171192-72171211 | Msa0183300:intron | 45.0% | |
| CAATCAGCGCCTAATGTCAT+GGG | - | chr1_4:72171193-72171212 | Msa0183300:intron | 45.0% | |
| GGACAGAACAAATGTGGACT+AGG | + | chr1_4:72171246-72171265 | None:intergenic | 45.0% | |
| ACTGAACAGGCTCGAAAATG+AGG | + | chr1_4:72171306-72171325 | None:intergenic | 45.0% | |
| GCCTGTTCAGTTAGTCCAAA+AGG | - | chr1_4:72171315-72171334 | Msa0183300:intron | 45.0% | |
| GAATCTGGCAAAAGTGGCTT+TGG | - | chr1_4:72171607-72171626 | Msa0183300:intron | 45.0% | |
| !!! | ATTATAATTTTTTTAATAAG+GGG | + | chr1_4:72169256-72169275 | None:intergenic | 5.0% |
| !!! | CATTATAATTTTTTTAATAA+GGG | + | chr1_4:72169257-72169276 | None:intergenic | 5.0% |
| !!! | TCATTATAATTTTTTTAATA+AGG | + | chr1_4:72169258-72169277 | None:intergenic | 5.0% |
| GGCACCTTGGAGATAGGAAT+GGG | - | chr1_4:72165457-72165476 | Msa0183300:intron | 50.0% | |
| CGTACCCATTCCTATCTCCA+AGG | + | chr1_4:72165464-72165483 | None:intergenic | 50.0% | |
| GTTTAGGCGATGGAACTACC+CGG | - | chr1_4:72165901-72165920 | Msa0183300:intron | 50.0% | |
| GGACAAGTTCTCGAGGTTGA+TGG | - | chr1_4:72165927-72165946 | Msa0183300:intron | 50.0% | |
| !! | TCTCGAGGTTGATGGCGAAA+AGG | - | chr1_4:72165935-72165954 | Msa0183300:intron | 50.0% |
| TGGCGAAAAGGCTGTTGTTC+AGG | - | chr1_4:72165947-72165966 | Msa0183300:intron | 50.0% | |
| CTCAGAAGCTCGGAACACTT+TGG | + | chr1_4:72166069-72166088 | None:intergenic | 50.0% | |
| GACCGTACAGTTTACTGGAG+AGG | - | chr1_4:72166282-72166301 | Msa0183300:intron | 50.0% | |
| CATGCAACACAGTCTGAAGG+GGG | + | chr1_4:72166667-72166686 | None:intergenic | 50.0% | |
| ! | TTCTGGAGGGGGAATTTCTC+AGG | - | chr1_4:72166915-72166934 | Msa0183300:CDS | 50.0% |
| !! | AGGATGGGCTAAATCTCGTG+AGG | + | chr1_4:72166948-72166967 | None:intergenic | 50.0% |
| AGAGGGACAGATGAAGTCAG+AGG | + | chr1_4:72167092-72167111 | None:intergenic | 50.0% | |
| CCAAGCATGTCCAGTGATAC+AGG | + | chr1_4:72167144-72167163 | None:intergenic | 50.0% | |
| CCTGTATCACTGGACATGCT+TGG | - | chr1_4:72167141-72167160 | Msa0183300:intron | 50.0% | |
| ! | TGGTCCGCCAATTTTACCTG+AGG | - | chr1_4:72167200-72167219 | Msa0183300:intron | 50.0% |
| GGTTCTCTCACTAGGGTTGA+TGG | + | chr1_4:72167340-72167359 | None:intergenic | 50.0% | |
| CGGGATAGGTTCTCTCACTA+GGG | + | chr1_4:72167347-72167366 | None:intergenic | 50.0% | |
| TCGGGATAGGTTCTCTCACT+AGG | + | chr1_4:72167348-72167367 | None:intergenic | 50.0% | |
| TAGTGAGAGAACCTATCCCG+AGG | - | chr1_4:72167347-72167366 | Msa0183300:intron | 50.0% | |
| CTGTATCATCTCCTCGGGAT+AGG | + | chr1_4:72167361-72167380 | None:intergenic | 50.0% | |
| CCAGTCTGTATCATCTCCTC+GGG | + | chr1_4:72167366-72167385 | None:intergenic | 50.0% | |
| GACCGGCAGCTGAAAATAGA+GGG | + | chr1_4:72167437-72167456 | None:intergenic | 50.0% | |
| AGACCGGCAGCTGAAAATAG+AGG | + | chr1_4:72167438-72167457 | None:intergenic | 50.0% | |
| GCACAGATTTGTCGTCAAGC+TGG | - | chr1_4:72167477-72167496 | Msa0183300:intron | 50.0% | |
| GGCAAAAGCGGAACAAAAGC+GGG | + | chr1_4:72168223-72168242 | None:intergenic | 50.0% | |
| ! | CTTTGAGGAGAACGGCTCAA+TGG | - | chr1_4:72168722-72168741 | Msa0183300:intron | 50.0% |
| CCCTACACTTCGCATGTGTT+TGG | + | chr1_4:72169102-72169121 | None:intergenic | 50.0% | |
| TGAACGTGCCGGAAGAATTG+AGG | - | chr1_4:72169794-72169813 | Msa0183300:intron | 50.0% | |
| GAACGTGCCGGAAGAATTGA+GGG | - | chr1_4:72169795-72169814 | Msa0183300:intron | 50.0% | |
| AACGTGCCGGAAGAATTGAG+GGG | - | chr1_4:72169796-72169815 | Msa0183300:intron | 50.0% | |
| ! | GGAAGAATTGAGGGGCGTAA+AGG | - | chr1_4:72169804-72169823 | Msa0183300:intron | 50.0% |
| CTGCCCCTCCGTAATATATC+CGG | + | chr1_4:72169992-72170011 | None:intergenic | 50.0% | |
| ! | TCACCACTGCAGAGTGCTAT+TGG | - | chr1_4:72170605-72170624 | Msa0183300:intron | 50.0% |
| ! | CACCACTGCAGAGTGCTATT+GGG | - | chr1_4:72170606-72170625 | Msa0183300:intron | 50.0% |
| ! | ACCACTGCAGAGTGCTATTG+GGG | - | chr1_4:72170607-72170626 | Msa0183300:intron | 50.0% |
| TGGGGAGGGAATGACTAGAA+AGG | - | chr1_4:72170625-72170644 | Msa0183300:CDS | 50.0% | |
| TGCCATTGGAAAGGATGTCC+AGG | - | chr1_4:72170801-72170820 | Msa0183300:intron | 50.0% | |
| TGCCTGGACATCCTTTCCAA+TGG | + | chr1_4:72170806-72170825 | None:intergenic | 50.0% | |
| AGCACTTTCATCTGAGGACC+TGG | - | chr1_4:72170849-72170868 | Msa0183300:intron | 50.0% | |
| !! | TGAGAGGAAGTTTGTTGCCC+AGG | - | chr1_4:72170995-72171014 | Msa0183300:intron | 50.0% |
| !! | GAGAGGAAGTTTGTTGCCCA+GGG | - | chr1_4:72170996-72171015 | Msa0183300:intron | 50.0% |
| GAAGTTCACGGGGGAAAATC+CGG | + | chr1_4:72171076-72171095 | None:intergenic | 50.0% | |
| AACTGGTCAAGAGTCTTGGC+TGG | + | chr1_4:72171110-72171129 | None:intergenic | 50.0% | |
| CAGCATCTCGGCTGTAAAAC+TGG | + | chr1_4:72171127-72171146 | None:intergenic | 50.0% | |
| ! | CAGTTTTACAGCCGAGATGC+TGG | - | chr1_4:72171125-72171144 | Msa0183300:intron | 50.0% |
| !! | ACATTAGGCGCTGATTGAGC+AGG | + | chr1_4:72171190-72171209 | None:intergenic | 50.0% |
| GTGTTGCACACAGTTTGGGA+TGG | - | chr1_4:72171401-72171420 | Msa0183300:intron | 50.0% | |
| ! | TGCACACAGTTTGGGATGGT+TGG | - | chr1_4:72171405-72171424 | Msa0183300:intron | 50.0% |
| TCTGGGGAATCTGGCAAAAG+TGG | - | chr1_4:72171601-72171620 | Msa0183300:intron | 50.0% | |
| GAACGTGGGTGAGACTCACT+GGG | + | chr1_4:72164647-72164666 | None:intergenic | 55.0% | |
| AGAGAGGGAGATGGGAACGT+GGG | + | chr1_4:72164661-72164680 | None:intergenic | 55.0% | |
| TGACGTACGTACCTGTGCTG+TGG | + | chr1_4:72164703-72164722 | None:intergenic | 55.0% | |
| CGGCACCTTGGAGATAGGAA+TGG | - | chr1_4:72165456-72165475 | Msa0183300:intron | 55.0% | |
| ! | AGGACTGTGTCTGGAGTTGC+CGG | - | chr1_4:72165718-72165737 | Msa0183300:CDS | 55.0% |
| GGGACAGATGAAGTCAGAGG+TGG | + | chr1_4:72167089-72167108 | None:intergenic | 55.0% | |
| CCCGAGGAGATGATACAGAC+TGG | - | chr1_4:72167363-72167382 | Msa0183300:intron | 55.0% | |
| GGCCACCCCAAAAATTGACG+CGG | - | chr1_4:72167844-72167863 | Msa0183300:intron | 55.0% | |
| ! | ACCGCGCCGCGTCAATTTTT+GGG | + | chr1_4:72167853-72167872 | None:intergenic | 55.0% |
| ! | TACCGCGCCGCGTCAATTTT+TGG | + | chr1_4:72167854-72167873 | None:intergenic | 55.0% |
| GGTCAACGCGGGCAAAAAAC+GGG | + | chr1_4:72168172-72168191 | None:intergenic | 55.0% | |
| GGGTCAACGCGGGCAAAAAA+CGG | + | chr1_4:72168173-72168192 | None:intergenic | 55.0% | |
| GAACAAAAGCGGGTCAACGC+GGG | + | chr1_4:72168213-72168232 | None:intergenic | 55.0% | |
| GGAACAAAAGCGGGTCAACG+CGG | + | chr1_4:72168214-72168233 | None:intergenic | 55.0% | |
| AGTCGCGCGTTAGGCAAAAG+CGG | + | chr1_4:72168235-72168254 | None:intergenic | 55.0% | |
| ! | CTTTTGCCTAACGCGCGACT+CGG | - | chr1_4:72168235-72168254 | Msa0183300:intron | 55.0% |
| CTCTGGCAGCAGATACCTGT+AGG | + | chr1_4:72169713-72169732 | None:intergenic | 55.0% | |
| GGTATCTGCTGCCAGAGAAG+AGG | - | chr1_4:72169716-72169735 | Msa0183300:intron | 55.0% | |
| TCTTCCTGGCACCTCTTCTC+TGG | + | chr1_4:72169730-72169749 | None:intergenic | 55.0% | |
| CCAGGATAACCACGTCTTCC+TGG | + | chr1_4:72169744-72169763 | None:intergenic | 55.0% | |
| CCAGGAAGACGTGGTTATCC+TGG | - | chr1_4:72169741-72169760 | Msa0183300:intron | 55.0% | |
| TCCCCAATAGCACTCTGCAG+TGG | + | chr1_4:72170611-72170630 | None:intergenic | 55.0% | |
| ! | ACTGCAGAGTGCTATTGGGG+AGG | - | chr1_4:72170610-72170629 | Msa0183300:CDS | 55.0% |
| ! | CTGCAGAGTGCTATTGGGGA+GGG | - | chr1_4:72170611-72170630 | Msa0183300:CDS | 55.0% |
| ACGGGGGAAAATCCGGAGTA+AGG | + | chr1_4:72171069-72171088 | None:intergenic | 55.0% | |
| GGAACGTGGGTGAGACTCAC+TGG | + | chr1_4:72164648-72164667 | None:intergenic | 60.0% | |
| CAGAGAGGGAGATGGGAACG+TGG | + | chr1_4:72164662-72164681 | None:intergenic | 60.0% | |
| CGACAATGACGACGGCACCT+TGG | - | chr1_4:72165444-72165463 | Msa0183300:intron | 60.0% | |
| GACGACGGCACCTTGGAGAT+AGG | - | chr1_4:72165451-72165470 | Msa0183300:intron | 60.0% | |
| ! | GTCTGGAGTTGCCGGACCAT+TGG | - | chr1_4:72165726-72165745 | Msa0183300:CDS | 60.0% |
| CTCGAGAACTTGTCCACGCC+GGG | + | chr1_4:72165922-72165941 | None:intergenic | 60.0% | |
| CCTCGAGAACTTGTCCACGC+CGG | + | chr1_4:72165923-72165942 | None:intergenic | 60.0% | |
| !! | CGCCGCGTCAATTTTTGGGG+TGG | + | chr1_4:72167849-72167868 | None:intergenic | 60.0% |
| ! | CCGCGCCGCGTCAATTTTTG+GGG | + | chr1_4:72167852-72167871 | None:intergenic | 60.0% |
| CCCCAAAAATTGACGCGGCG+CGG | - | chr1_4:72167849-72167868 | Msa0183300:intron | 60.0% | |
| AATTGACGCGGCGCGGTAAG+CGG | - | chr1_4:72167856-72167875 | Msa0183300:intron | 60.0% | |
| ! | GCGGGCGCTTTTACATGACG+CGG | - | chr1_4:72167886-72167905 | Msa0183300:intron | 60.0% |
| GGGCAAAAGCGGGTCAATGC+GGG | + | chr1_4:72168193-72168212 | None:intergenic | 60.0% | |
| CGGGCAAAAGCGGGTCAATG+CGG | + | chr1_4:72168194-72168213 | None:intergenic | 60.0% | |
| !! | GAAGAGGTGCCAGGAAGACG+TGG | - | chr1_4:72169732-72169751 | Msa0183300:intron | 60.0% |
| CCGGCGTGGACAAGTTCTCG+AGG | - | chr1_4:72165920-72165939 | Msa0183300:intron | 65.0% | |
| GTCAAAGCGGAAACGCGGCG+CGG | - | chr1_4:72167818-72167837 | Msa0183300:intron | 65.0% | |
| ATTGACGCGGCGCGGTAAGC+GGG | - | chr1_4:72167857-72167876 | Msa0183300:intron | 65.0% | |
| GGGTCAATGCGGGTCAACGC+GGG | + | chr1_4:72168183-72168202 | None:intergenic | 65.0% | |
| CGGGTCAATGCGGGTCAACG+CGG | + | chr1_4:72168184-72168203 | None:intergenic | 65.0% | |
| GGGTCAACGCGGGCAAAAGC+GGG | + | chr1_4:72168203-72168222 | None:intergenic | 65.0% | |
| CGGGTCAACGCGGGCAAAAG+CGG | + | chr1_4:72168204-72168223 | None:intergenic | 65.0% | |
| !! | GCTGCCAGAGAAGAGGTGCC+AGG | - | chr1_4:72169723-72169742 | Msa0183300:intron | 65.0% |
| GGCGATGGAACTACCCGGCG+TGG | - | chr1_4:72165906-72165925 | Msa0183300:intron | 70.0% | |
| ACGCGACCGAGTCGCGCGTT+AGG | + | chr1_4:72168244-72168263 | None:intergenic | 70.0% | |
| CGGTCGCGTTCTGACGCGCT+AGG | - | chr1_4:72168255-72168274 | Msa0183300:intron | 70.0% | |
| GGTCTAACGCGGCGCGATCG+CGG | + | chr1_4:72168301-72168320 | None:intergenic | 70.0% | |
| ! | GCGGGTGTCGTAGGCTCCCT+GGG | + | chr1_4:72171015-72171034 | None:intergenic | 70.0% |
| ! | TGCGGGTGTCGTAGGCTCCC+TGG | + | chr1_4:72171016-72171035 | None:intergenic | 70.0% |
| ! | AGCGGAAACGCGGCGCGGCG+CGG | - | chr1_4:72167823-72167842 | Msa0183300:intron | 80.0% |
| ! | CGCGGTAAGCGGGCGCGACG+CGG | - | chr1_4:72167867-72167886 | Msa0183300:intron | 80.0% |
| ! | GCGGTAAGCGGGCGCGACGC+GGG | - | chr1_4:72167868-72167887 | Msa0183300:intron | 80.0% |
| ! | AACGCGGCGCGATCGCGGCG+CGG | + | chr1_4:72168296-72168315 | None:intergenic | 80.0% |
| ! | GGCGCGATCGCGGCGCGGAG+CGG | + | chr1_4:72168291-72168310 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 72164632 | 72171744 | 72164632 | ID=Msa0183300;Name=Msa0183300 |
| chr1_4 | mRNA | 72164632 | 72171744 | 72164632 | ID=Msa0183300-mRNA-1;Parent=Msa0183300;Name=Msa0183300-mRNA-1;_AED=0.11;_eAED=0.11;_QI=86|1|1|1|0.92|0.86|15|590|489 |
| chr1_4 | exon | 72164632 | 72165407 | 72164632 | ID=Msa0183300-mRNA-1:exon:24347;Parent=Msa0183300-mRNA-1 |
| chr1_4 | exon | 72165506 | 72165589 | 72165506 | ID=Msa0183300-mRNA-1:exon:24346;Parent=Msa0183300-mRNA-1 |
| chr1_4 | exon | 72165706 | 72165759 | 72165706 | ID=Msa0183300-mRNA-1:exon:24345;Parent=Msa0183300-mRNA-1 |
| chr1_4 | exon | 72165872 | 72165919 | 72165872 | ID=Msa0183300-mRNA-1:exon:24344;Parent=Msa0183300-mRNA-1 |
| chr1_4 | exon | 72166332 | 72166414 | 72166332 | ID=Msa0183300-mRNA-1:exon:24343;Parent=Msa0183300-mRNA-1 |
| chr1_4 | exon | 72166509 | 72166659 | 72166509 | ID=Msa0183300-mRNA-1:exon:24342;Parent=Msa0183300-mRNA-1 |
| chr1_4 | exon | 72166886 | 72167023 | 72166886 | ID=Msa0183300-mRNA-1:exon:24341;Parent=Msa0183300-mRNA-1 |
| chr1_4 | exon | 72167606 | 72167737 | 72167606 | ID=Msa0183300-mRNA-1:exon:24340;Parent=Msa0183300-mRNA-1 |
| chr1_4 | exon | 72168837 | 72169045 | 72168837 | ID=Msa0183300-mRNA-1:exon:24339;Parent=Msa0183300-mRNA-1 |
| chr1_4 | exon | 72169136 | 72169247 | 72169136 | ID=Msa0183300-mRNA-1:exon:24338;Parent=Msa0183300-mRNA-1 |
| chr1_4 | exon | 72170073 | 72170132 | 72170073 | ID=Msa0183300-mRNA-1:exon:24337;Parent=Msa0183300-mRNA-1 |
| chr1_4 | exon | 72170408 | 72170506 | 72170408 | ID=Msa0183300-mRNA-1:exon:24336;Parent=Msa0183300-mRNA-1 |
| chr1_4 | exon | 72170608 | 72170663 | 72170608 | ID=Msa0183300-mRNA-1:exon:24335;Parent=Msa0183300-mRNA-1 |
| chr1_4 | exon | 72170898 | 72170962 | 72170898 | ID=Msa0183300-mRNA-1:exon:24334;Parent=Msa0183300-mRNA-1 |
| chr1_4 | exon | 72171666 | 72171744 | 72171666 | ID=Msa0183300-mRNA-1:exon:24333;Parent=Msa0183300-mRNA-1 |
| chr1_4 | five_prime_UTR | 72171666 | 72171744 | 72171666 | ID=Msa0183300-mRNA-1:five_prime_utr;Parent=Msa0183300-mRNA-1 |
| chr1_4 | five_prime_UTR | 72170956 | 72170962 | 72170956 | ID=Msa0183300-mRNA-1:five_prime_utr;Parent=Msa0183300-mRNA-1 |
| chr1_4 | CDS | 72170898 | 72170955 | 72170898 | ID=Msa0183300-mRNA-1:cds;Parent=Msa0183300-mRNA-1 |
| chr1_4 | CDS | 72170608 | 72170663 | 72170608 | ID=Msa0183300-mRNA-1:cds;Parent=Msa0183300-mRNA-1 |
| chr1_4 | CDS | 72170408 | 72170506 | 72170408 | ID=Msa0183300-mRNA-1:cds;Parent=Msa0183300-mRNA-1 |
| chr1_4 | CDS | 72170073 | 72170132 | 72170073 | ID=Msa0183300-mRNA-1:cds;Parent=Msa0183300-mRNA-1 |
| chr1_4 | CDS | 72169136 | 72169247 | 72169136 | ID=Msa0183300-mRNA-1:cds;Parent=Msa0183300-mRNA-1 |
| chr1_4 | CDS | 72168837 | 72169045 | 72168837 | ID=Msa0183300-mRNA-1:cds;Parent=Msa0183300-mRNA-1 |
| chr1_4 | CDS | 72167606 | 72167737 | 72167606 | ID=Msa0183300-mRNA-1:cds;Parent=Msa0183300-mRNA-1 |
| chr1_4 | CDS | 72166886 | 72167023 | 72166886 | ID=Msa0183300-mRNA-1:cds;Parent=Msa0183300-mRNA-1 |
| chr1_4 | CDS | 72166509 | 72166659 | 72166509 | ID=Msa0183300-mRNA-1:cds;Parent=Msa0183300-mRNA-1 |
| chr1_4 | CDS | 72166332 | 72166414 | 72166332 | ID=Msa0183300-mRNA-1:cds;Parent=Msa0183300-mRNA-1 |
| chr1_4 | CDS | 72165872 | 72165919 | 72165872 | ID=Msa0183300-mRNA-1:cds;Parent=Msa0183300-mRNA-1 |
| chr1_4 | CDS | 72165706 | 72165759 | 72165706 | ID=Msa0183300-mRNA-1:cds;Parent=Msa0183300-mRNA-1 |
| chr1_4 | CDS | 72165506 | 72165589 | 72165506 | ID=Msa0183300-mRNA-1:cds;Parent=Msa0183300-mRNA-1 |
| chr1_4 | CDS | 72165222 | 72165407 | 72165222 | ID=Msa0183300-mRNA-1:cds;Parent=Msa0183300-mRNA-1 |
| chr1_4 | three_prime_UTR | 72164632 | 72165221 | 72164632 | ID=Msa0183300-mRNA-1:three_prime_utr;Parent=Msa0183300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
