Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1262990 | XP_013458166.1 | 100.000 | 145 | 0 | 0 | 1 | 145 | 1 | 145 | 1.24e-102 | 300 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1262990 | sp|Q65WT0|BD31B_ORYSJ | 88.276 | 145 | 17 | 0 | 1 | 145 | 1 | 145 | 2.01e-96 | 277 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1262990 | A0A072UR78 | 100.000 | 145 | 0 | 0 | 1 | 145 | 1 | 145 | 5.92e-103 | 300 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0023840 | Msa1262990 | 0.812339 | 4.456155e-51 | -8.615850e-47 |
| Msa0029000 | Msa1262990 | 0.802226 | 6.203825e-49 | -8.615850e-47 |
| Msa0063350 | Msa1262990 | 0.801811 | 7.550296e-49 | -8.615850e-47 |
| Msa0613460 | Msa1262990 | -0.825613 | 4.261186e-54 | -8.615850e-47 |
| Msa0658570 | Msa1262990 | -0.808483 | 3.029607e-50 | -8.615850e-47 |
| Msa0698930 | Msa1262990 | -0.802085 | 6.633129e-49 | -8.615850e-47 |
| Msa0708050 | Msa1262990 | 0.847540 | 1.083791e-59 | -8.615850e-47 |
| Msa0708190 | Msa1262990 | 0.841736 | 3.966353e-58 | -8.615850e-47 |
| Msa0802470 | Msa1262990 | 0.806810 | 6.866354e-50 | -8.615850e-47 |
| Msa0810760 | Msa1262990 | -0.807802 | 4.231137e-50 | -8.615850e-47 |
| Msa0818110 | Msa1262990 | -0.801647 | 8.158975e-49 | -8.615850e-47 |
| Msa0169820 | Msa1262990 | -0.811225 | 7.786165e-51 | -8.615850e-47 |
| Msa0178510 | Msa1262990 | -0.801772 | 7.688862e-49 | -8.615850e-47 |
| Msa0183010 | Msa1262990 | 0.827650 | 1.391596e-54 | -8.615850e-47 |
| Msa0196020 | Msa1262990 | 0.806780 | 6.965953e-50 | -8.615850e-47 |
| Msa0199800 | Msa1262990 | 0.813815 | 2.114097e-51 | -8.615850e-47 |
| Msa0207310 | Msa1262990 | 0.813036 | 3.135722e-51 | -8.615850e-47 |
| Msa0210410 | Msa1262990 | 0.815365 | 9.596104e-52 | -8.615850e-47 |
| Msa0223410 | Msa1262990 | 0.809109 | 2.226130e-50 | -8.615850e-47 |
| Msa0230640 | Msa1262990 | 0.813419 | 2.583955e-51 | -8.615850e-47 |
| Msa0236700 | Msa1262990 | 0.804832 | 1.787884e-49 | -8.615850e-47 |
| Msa1224580 | Msa1262990 | 0.839841 | 1.244449e-57 | -8.615850e-47 |
| Msa1244750 | Msa1262990 | 0.807733 | 4.376216e-50 | -8.615850e-47 |
| Msa1262990 | Msa1264860 | 0.821575 | 3.754072e-53 | -8.615850e-47 |
| Msa1262990 | Msa1267060 | -0.816716 | 4.791445e-52 | -8.615850e-47 |
| Msa1262990 | Msa1297310 | -0.815496 | 8.973350e-52 | -8.615850e-47 |
| Msa1262990 | Msa1317480 | 0.808791 | 2.602991e-50 | -8.615850e-47 |
| Msa1262990 | Msa1328290 | 0.804047 | 2.605501e-49 | -8.615850e-47 |
| Msa1262990 | Msa1376890 | -0.811145 | 8.103399e-51 | -8.615850e-47 |
| Msa1262990 | Msa1385020 | -0.816393 | 5.658345e-52 | -8.615850e-47 |
| Msa1262990 | Msa1387590 | -0.808185 | 3.506708e-50 | -8.615850e-47 |
| Msa1262990 | Msa1390160 | 0.800906 | 1.156849e-48 | -8.615850e-47 |
| Msa1262990 | Msa1393410 | -0.802944 | 4.411760e-49 | -8.615850e-47 |
| Msa1262990 | Msa1397260 | -0.802856 | 4.599325e-49 | -8.615850e-47 |
| Msa1262990 | Msa1401140 | -0.802348 | 5.854680e-49 | -8.615850e-47 |
| Msa1262990 | Msa1401530 | -0.820828 | 5.580475e-53 | -8.615850e-47 |
| Msa1262990 | Msa1404240 | 0.816803 | 4.579674e-52 | -8.615850e-47 |
| Msa1262990 | Msa1416040 | 0.812538 | 4.030880e-51 | -8.615850e-47 |
| Msa1262990 | Msa1435420 | -0.800401 | 1.466774e-48 | -8.615850e-47 |
| Msa1262990 | Msa1451620 | 0.845563 | 3.756141e-59 | -8.615850e-47 |
| Msa1262990 | Msa1461810 | 0.808489 | 3.020246e-50 | -8.615850e-47 |
| Msa0365490 | Msa1262990 | -0.813390 | 2.622606e-51 | -8.615850e-47 |
| Msa0381600 | Msa1262990 | 0.823108 | 1.653809e-53 | -8.615850e-47 |
| Msa0388030 | Msa1262990 | 0.850078 | 2.142813e-60 | -8.615850e-47 |
| Msa0392040 | Msa1262990 | 0.821826 | 3.283975e-53 | -8.615850e-47 |
| Msa0394410 | Msa1262990 | 0.804902 | 1.728754e-49 | -8.615850e-47 |
| Msa0433410 | Msa1262990 | 0.821808 | 3.316087e-53 | -8.615850e-47 |
| Msa0437830 | Msa1262990 | 0.802667 | 5.032982e-49 | -8.615850e-47 |
| Msa0450350 | Msa1262990 | -0.803615 | 3.203469e-49 | -8.615850e-47 |
| Msa0458440 | Msa1262990 | -0.805879 | 1.078834e-49 | -8.615850e-47 |
| Msa0458900 | Msa1262990 | 0.801787 | 7.636190e-49 | -8.615850e-47 |
| Msa0469940 | Msa1262990 | 0.836938 | 6.978735e-57 | -8.615850e-47 |
| Msa0990960 | Msa1262990 | -0.810194 | 1.300956e-50 | -8.615850e-47 |
| Msa0994740 | Msa1262990 | -0.813347 | 2.680389e-51 | -8.615850e-47 |
| Msa0999270 | Msa1262990 | 0.826532 | 2.576216e-54 | -8.615850e-47 |
| Msa0999960 | Msa1262990 | 0.802512 | 5.415561e-49 | -8.615850e-47 |
| Msa1006850 | Msa1262990 | -0.804328 | 2.277712e-49 | -8.615850e-47 |
| Msa1041600 | Msa1262990 | 0.802869 | 4.570507e-49 | -8.615850e-47 |
| Msa1068200 | Msa1262990 | 0.841949 | 3.483508e-58 | -8.615850e-47 |
| Msa1073070 | Msa1262990 | 0.806045 | 9.952421e-50 | -8.615850e-47 |
| Msa1075080 | Msa1262990 | 0.803543 | 3.315204e-49 | -8.615850e-47 |
| Msa0266000 | Msa1262990 | 0.803145 | 4.008157e-49 | -8.615850e-47 |
| Msa0268090 | Msa1262990 | -0.808925 | 2.437349e-50 | -8.615850e-47 |
| Msa0279210 | Msa1262990 | 0.807847 | 4.137502e-50 | -8.615850e-47 |
| Msa0279250 | Msa1262990 | 0.801677 | 8.044379e-49 | -8.615850e-47 |
| Msa0306210 | Msa1262990 | 0.820385 | 7.054892e-53 | -8.615850e-47 |
| Msa0318970 | Msa1262990 | 0.802686 | 4.986518e-49 | -8.615850e-47 |
| Msa0344690 | Msa1262990 | 0.816233 | 6.146203e-52 | -8.615850e-47 |
| Msa0350870 | Msa1262990 | -0.807715 | 4.414077e-50 | -8.615850e-47 |
| Msa1124540 | Msa1262990 | 0.839384 | 1.636916e-57 | -8.615850e-47 |
| Msa1131670 | Msa1262990 | 0.810560 | 1.084977e-50 | -8.615850e-47 |
| Msa1144720 | Msa1262990 | 0.838454 | 2.848276e-57 | -8.615850e-47 |
| Msa1156340 | Msa1262990 | 0.831843 | 1.326301e-55 | -8.615850e-47 |
| Msa1166500 | Msa1262990 | 0.800508 | 1.394684e-48 | -8.615850e-47 |
| Msa1171730 | Msa1262990 | -0.840527 | 8.239720e-58 | -8.615850e-47 |
| Msa1205390 | Msa1262990 | -0.806232 | 9.092645e-50 | -8.615850e-47 |
| Msa0492880 | Msa1262990 | -0.825104 | 5.622959e-54 | -8.615850e-47 |
| Msa0521620 | Msa1262990 | -0.812411 | 4.297335e-51 | -8.615850e-47 |
| Msa0532810 | Msa1262990 | 0.812244 | 4.673439e-51 | -8.615850e-47 |
| Msa0574760 | Msa1262990 | 0.808268 | 3.366559e-50 | -8.615850e-47 |
| Msa0864470 | Msa1262990 | 0.846979 | 1.545228e-59 | -8.615850e-47 |
| Msa0886330 | Msa1262990 | 0.861358 | 1.085223e-63 | -8.615850e-47 |
| Msa0891040 | Msa1262990 | -0.807903 | 4.027154e-50 | -8.615850e-47 |
| Msa0913480 | Msa1262990 | 0.839100 | 1.938781e-57 | -8.615850e-47 |
| Msa0925870 | Msa1262990 | -0.817305 | 3.533515e-52 | -8.615850e-47 |
| Msa0930910 | Msa1262990 | 0.805294 | 1.431018e-49 | -8.615850e-47 |
| Msa0942550 | Msa1262990 | 0.811973 | 5.354069e-51 | -8.615850e-47 |
| Msa0946690 | Msa1262990 | 0.807687 | 4.475187e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1262990 | MtrunA17_Chr4g0065671 | 100.000 | 145 | 0 | 0 | 1 | 145 | 1 | 145 | 1.14e-106 | 300 |
| Msa1262990 | MtrunA17_Chr8g0378051 | 96.552 | 145 | 5 | 0 | 1 | 145 | 1 | 145 | 1.88e-104 | 294 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1262990 | AT4G21110.1 | 86.207 | 145 | 20 | 0 | 1 | 145 | 1 | 145 | 6.07e-95 | 270 |
| Msa1262990 | AT4G21110.2 | 86.207 | 145 | 20 | 0 | 1 | 145 | 1 | 145 | 6.07e-95 | 270 |
Find 69 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGAAATTTCCTTTCTCTTA+TGG | 0.231250 | 8_2:-66021108 | None:intergenic |
| TCAATTAATTCCCAGCCTTC+TGG | 0.234580 | 8_2:-66020850 | None:intergenic |
| ACTCGGCTTGTCTTTACTTT+TGG | 0.267712 | 8_2:-66020820 | None:intergenic |
| TGTCTTCTCATTCTTCTTCT+CGG | 0.300836 | 8_2:+66019560 | Msa1262990:five_prime_UTR |
| TTCTCCTCCCTGAGCTCCTT+GGG | 0.301872 | 8_2:-66022547 | None:intergenic |
| CAAATACATAGCGGCTCTTC+TGG | 0.318337 | 8_2:-66021078 | None:intergenic |
| CTTCTCCTCCCTGAGCTCCT+TGG | 0.345032 | 8_2:-66022548 | None:intergenic |
| TATTAATCTGGAGGGTTTGT+TGG | 0.350816 | 8_2:+66022636 | Msa1262990:three_prime_UTR |
| GGACCTCAATTATATTAATC+TGG | 0.356373 | 8_2:+66022624 | Msa1262990:three_prime_UTR |
| GAGGTAAACTCCGTCGCTTC+CGG | 0.376156 | 8_2:+66019588 | Msa1262990:five_prime_UTR |
| AAAGAAAATGTGAGACTTTG+TGG | 0.382714 | 8_2:+66021035 | Msa1262990:CDS |
| ACCGCAACCTAATTGCAAAA+TGG | 0.383315 | 8_2:+66021170 | Msa1262990:CDS |
| GCAGAGTGCCCAAGGAGCTC+AGG | 0.388903 | 8_2:+66022539 | Msa1262990:CDS |
| CAATTAATTCCCAGCCTTCT+GGG | 0.404207 | 8_2:-66020849 | None:intergenic |
| TATGAATTCTGTTTAGATCA+AGG | 0.408300 | 8_2:+66021139 | Msa1262990:CDS |
| TTGTGCAAGTGGGGATTGAT+TGG | 0.417476 | 8_2:+66022603 | Msa1262990:exon |
| CCTACACTTCGTGAACTTCA+AGG | 0.446024 | 8_2:+66020874 | Msa1262990:CDS |
| AATGTTACAAAACTCAAGTC+AGG | 0.471208 | 8_2:-66022782 | None:intergenic |
| CTCAATTATATTAATCTGGA+GGG | 0.480934 | 8_2:+66022628 | Msa1262990:three_prime_UTR |
| AGCCTTCTGGGTATTTAACT+CGG | 0.490950 | 8_2:-66020837 | None:intergenic |
| GAGTTAAATACCCAGAAGGC+TGG | 0.492946 | 8_2:+66020839 | Msa1262990:CDS |
| CAAGGAGCTCAGGGAGGAGA+AGG | 0.494422 | 8_2:+66022549 | Msa1262990:CDS |
| CCTTTGCTTATTGTCGTCTG+AGG | 0.507480 | 8_2:+66019640 | Msa1262990:five_prime_UTR |
| GTGTGTTCATTGTGGTTGCA+AGG | 0.509966 | 8_2:+66022579 | Msa1262990:CDS |
| GTTGCAAGGGTTGTGCAAGT+GGG | 0.512248 | 8_2:+66022593 | Msa1262990:CDS |
| GGTTGCAAGGGTTGTGCAAG+TGG | 0.514571 | 8_2:+66022592 | Msa1262990:CDS |
| CAACATAGGCGTTCATAACC+AGG | 0.518122 | 8_2:-66022466 | None:intergenic |
| ACTTCACAAGAGCTATGCAT+TGG | 0.521024 | 8_2:+66022716 | Msa1262990:three_prime_UTR |
| CTTCACAAGAGCTATGCATT+GGG | 0.524120 | 8_2:+66022717 | Msa1262990:three_prime_UTR |
| CCTAATTGCAAAATGGAAGA+AGG | 0.526082 | 8_2:+66021177 | Msa1262990:CDS |
| CTTTGCTTATTGTCGTCTGA+GGG | 0.527430 | 8_2:+66019641 | Msa1262990:five_prime_UTR |
| AAAGGTGAGCGGTGGGTGGT+TGG | 0.529818 | 8_2:-66019622 | None:intergenic |
| TTATCGTATAAGTTACTCAC+TGG | 0.530571 | 8_2:+66019523 | Msa1262990:five_prime_UTR |
| GTATGCACCTCAAGCAACAT+AGG | 0.540597 | 8_2:-66022480 | None:intergenic |
| CCTCCAGATTAATATAATTG+AGG | 0.542772 | 8_2:-66022627 | None:intergenic |
| CCTTGAAGTTCACGAAGTGT+AGG | 0.544038 | 8_2:-66020874 | None:intergenic |
| CGCACAACTGCCGGAAGCGA+CGG | 0.544706 | 8_2:-66019598 | None:intergenic |
| CAGAGTGCCCAAGGAGCTCA+GGG | 0.552081 | 8_2:+66022540 | Msa1262990:CDS |
| TGTGTTCATTGTGGTTGCAA+GGG | 0.552779 | 8_2:+66022580 | Msa1262990:CDS |
| TTGCAAGGGTTGTGCAAGTG+GGG | 0.556074 | 8_2:+66022594 | Msa1262990:CDS |
| TGAACTCTACCATAAGAGAA+AGG | 0.559158 | 8_2:+66021099 | Msa1262990:CDS |
| AAGAATGAGAAGACAAGTAG+TGG | 0.559866 | 8_2:-66019552 | None:intergenic |
| AGTTAAATACCCAGAAGGCT+GGG | 0.561161 | 8_2:+66020840 | Msa1262990:CDS |
| CCTCAATTATATTAATCTGG+AGG | 0.565832 | 8_2:+66022627 | Msa1262990:three_prime_UTR |
| CTTCAAGGAAAGATGAGGGA+AGG | 0.566524 | 8_2:+66020889 | Msa1262990:CDS |
| GTGGTTGGTCGCACAACTGC+CGG | 0.567423 | 8_2:-66019607 | None:intergenic |
| TTGTGTATGCAGAGTGCCCA+AGG | 0.571684 | 8_2:+66022531 | Msa1262990:CDS |
| GTTATAGAGTGTGTTCATTG+TGG | 0.573951 | 8_2:+66022571 | Msa1262990:CDS |
| ATTCTTCTTCTCGGTTGTCG+AGG | 0.580297 | 8_2:+66019569 | Msa1262990:five_prime_UTR |
| GTGAACTTCAAGGAAAGATG+AGG | 0.592845 | 8_2:+66020884 | Msa1262990:CDS |
| CAATAAGCAAAGGTGAGCGG+TGG | 0.595728 | 8_2:-66019630 | None:intergenic |
| CACTCTGCATACACAAGTGG+TGG | 0.609114 | 8_2:-66022524 | None:intergenic |
| AATAAGCAAAGGTGAGCGGT+GGG | 0.617144 | 8_2:-66019629 | None:intergenic |
| GCTGAGAATGACCCACATGA+TGG | 0.619377 | 8_2:+66021010 | Msa1262990:intron |
| AAGCAAAGGTGAGCGGTGGG+TGG | 0.625169 | 8_2:-66019626 | None:intergenic |
| AATTAATAATAATACACAAG+GGG | 0.637439 | 8_2:-66022843 | None:intergenic |
| ACAATTAATAATAATACACA+AGG | 0.638593 | 8_2:-66022845 | None:intergenic |
| TGAACTTCAAGGAAAGATGA+GGG | 0.638807 | 8_2:+66020885 | Msa1262990:CDS |
| ATGAACGCCTATGTTGCTTG+AGG | 0.642564 | 8_2:+66022473 | Msa1262990:CDS |
| GGGCACTCTGCATACACAAG+TGG | 0.642607 | 8_2:-66022527 | None:intergenic |
| AGCCGAGTTAAATACCCAGA+AGG | 0.645736 | 8_2:+66020835 | Msa1262990:CDS |
| TTGTATTGACTATTGAGCGA+AGG | 0.655791 | 8_2:-66022881 | None:intergenic |
| CGACAATAAGCAAAGGTGAG+CGG | 0.662024 | 8_2:-66019633 | None:intergenic |
| CAATTAATAATAATACACAA+GGG | 0.677423 | 8_2:-66022844 | None:intergenic |
| GTGGCGAAATTGTGATCGCG+TGG | 0.685360 | 8_2:-66022505 | None:intergenic |
| CCTCAGACGACAATAAGCAA+AGG | 0.685637 | 8_2:-66019640 | None:intergenic |
| AGTGCCCAAGGAGCTCAGGG+AGG | 0.692740 | 8_2:+66022543 | Msa1262990:CDS |
| ACAGTAGTGATACAACGTAG+AGG | 0.716098 | 8_2:-66022686 | None:intergenic |
| GGTAGAGTTCAAATACATAG+CGG | 0.738599 | 8_2:-66021087 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAATAACTAATTTTGTAAA+TGG | + | chr8_2:66020176-66020195 | Msa1262990:intron | 10.0% |
| !!! | ATTTTATATATATTCCTATA+TGG | - | chr8_2:66022045-66022064 | None:intergenic | 10.0% |
| !! | TTCAAATTATTCAAGAAATT+TGG | - | chr8_2:66019830-66019849 | None:intergenic | 15.0% |
| !! | TTAACACATAAAAACAATTA+GGG | - | chr8_2:66020146-66020165 | None:intergenic | 15.0% |
| !! | ATTAACACATAAAAACAATT+AGG | - | chr8_2:66020147-66020166 | None:intergenic | 15.0% |
| !! | AAATGAAAATATGACATATA+AGG | - | chr8_2:66020786-66020805 | None:intergenic | 15.0% |
| !! | AATTAATAATAATACACAAG+GGG | - | chr8_2:66022846-66022865 | None:intergenic | 15.0% |
| !! | CAATTAATAATAATACACAA+GGG | - | chr8_2:66022847-66022866 | None:intergenic | 15.0% |
| !! | ACAATTAATAATAATACACA+AGG | - | chr8_2:66022848-66022867 | None:intergenic | 15.0% |
| !! | AAAACAAAATATTGAAGAAC+AGG | - | chr8_2:66019678-66019697 | None:intergenic | 20.0% |
| !! | TCTTATCAATTGTATATACT+TGG | - | chr8_2:66020559-66020578 | None:intergenic | 20.0% |
| !! | TAACATAAATGGAACTTTAA+AGG | - | chr8_2:66020738-66020757 | None:intergenic | 20.0% |
| !! | ATATTGTTATATCCTTTATG+TGG | + | chr8_2:66020985-66021004 | Msa1262990:intron | 20.0% |
| !!! | TAACATTCTTGTCATTTATA+CGG | - | chr8_2:66021610-66021629 | None:intergenic | 20.0% |
| !! | AAAACCATTTAAAAACCAAA+AGG | - | chr8_2:66021736-66021755 | None:intergenic | 20.0% |
| !! | GTTTAAAACGTAAAGAGAAA+AGG | - | chr8_2:66019723-66019742 | None:intergenic | 25.0% |
| !! | TTTACGATGCTTATTTCTTA+AGG | + | chr8_2:66019772-66019791 | Msa1262990:intron | 25.0% |
| ! | ATTCAAGAAATTTGGATACA+CGG | - | chr8_2:66019822-66019841 | None:intergenic | 25.0% |
| ! | AAACCCTTAGTTTATAATGT+TGG | - | chr8_2:66019924-66019943 | None:intergenic | 25.0% |
| !! | TTATAAACTAAGGGTTTGTT+TGG | + | chr8_2:66019927-66019946 | Msa1262990:intron | 25.0% |
| !! | TATAAACTAAGGGTTTGTTT+GGG | + | chr8_2:66019928-66019947 | Msa1262990:intron | 25.0% |
| ! | TATTATTCATAAGCTTGTCA+AGG | - | chr8_2:66020071-66020090 | None:intergenic | 25.0% |
| ! | CAAAAATAAGTCAATCCAAA+CGG | + | chr8_2:66020119-66020138 | Msa1262990:intron | 25.0% |
| ! | AAAAATAAGTCAATCCAAAC+GGG | + | chr8_2:66020120-66020139 | Msa1262990:intron | 25.0% |
| !! | TTTTATCCAATAATACCAGT+TGG | - | chr8_2:66020459-66020478 | None:intergenic | 25.0% |
| ! | ACTGGTATTATTGGATAAAA+TGG | + | chr8_2:66020459-66020478 | Msa1262990:intron | 25.0% |
| ! | CTGGTATTATTGGATAAAAT+GGG | + | chr8_2:66020460-66020479 | Msa1262990:intron | 25.0% |
| ! | TGGTATTATTGGATAAAATG+GGG | + | chr8_2:66020461-66020480 | Msa1262990:intron | 25.0% |
| ! | TCTATTCTACTTATGTTAAG+AGG | - | chr8_2:66020690-66020709 | None:intergenic | 25.0% |
| ! | ATTCTAGCAAGTAACATAAA+TGG | - | chr8_2:66020749-66020768 | None:intergenic | 25.0% |
| ! | GAATGAAAAAGAATACAGTA+AGG | - | chr8_2:66020941-66020960 | None:intergenic | 25.0% |
| !! | TGGTGTGCAATTTTAAATAT+AGG | - | chr8_2:66021061-66021080 | None:intergenic | 25.0% |
| ! | TAGAAATTTCCTTTCTCTTA+TGG | - | chr8_2:66021111-66021130 | None:intergenic | 25.0% |
| ! | TATGAATTCTGTTTAGATCA+AGG | + | chr8_2:66021139-66021158 | Msa1262990:CDS | 25.0% |
| ! | GGAAAGTAAATTTCATTTGA+CGG | + | chr8_2:66021253-66021272 | Msa1262990:intron | 25.0% |
| ! | GAAAGTAAATTTCATTTGAC+GGG | + | chr8_2:66021254-66021273 | Msa1262990:intron | 25.0% |
| ! | AACAAGGTGATTAGAATTTA+AGG | - | chr8_2:66021451-66021470 | None:intergenic | 25.0% |
| ! | GTATAAATGACAAGAATGTT+AGG | + | chr8_2:66021609-66021628 | Msa1262990:intron | 25.0% |
| ! | TTCAAGAGACATAATAAACT+CGG | + | chr8_2:66021815-66021834 | Msa1262990:intron | 25.0% |
| ! | TCATTCATTGAATATTCATC+TGG | - | chr8_2:66021944-66021963 | None:intergenic | 25.0% |
| ! | TATTCAATGAATGAACCAAA+TGG | + | chr8_2:66021950-66021969 | Msa1262990:intron | 25.0% |
| !! | TTCACTATTAAACAAGTTGA+AGG | - | chr8_2:66021991-66022010 | None:intergenic | 25.0% |
| !! | TCAACTTGTTTAATAGTGAA+TGG | + | chr8_2:66021991-66022010 | Msa1262990:intron | 25.0% |
| ! | TTTAATAGTGAATGGTTGTT+TGG | + | chr8_2:66021999-66022018 | Msa1262990:intron | 25.0% |
| ! | CAAACAATTACTTTAGCAAA+GGG | - | chr8_2:66022079-66022098 | None:intergenic | 25.0% |
| ! | TCAAACAATTACTTTAGCAA+AGG | - | chr8_2:66022080-66022099 | None:intergenic | 25.0% |
| ! | ACTAAATCTACTCTTACAAT+TGG | + | chr8_2:66022166-66022185 | Msa1262990:intron | 25.0% |
| !!! | AGACAATATTTTTTTCCTAG+AGG | + | chr8_2:66022227-66022246 | Msa1262990:intron | 25.0% |
| ! | ATTAACTGAAGACAATGAAA+AGG | - | chr8_2:66022330-66022349 | None:intergenic | 25.0% |
| ! | ACCGTTGAAAATGAAATATA+TGG | + | chr8_2:66022373-66022392 | Msa1262990:intron | 25.0% |
| !! | GCCATATATTTCATTTTCAA+CGG | - | chr8_2:66022377-66022396 | None:intergenic | 25.0% |
| ! | CTCAATTATATTAATCTGGA+GGG | + | chr8_2:66022628-66022647 | Msa1262990:three_prime_UTR | 25.0% |
| TTATCGTATAAGTTACTCAC+TGG | + | chr8_2:66019523-66019542 | Msa1262990:five_prime_UTR | 30.0% | |
| AAAATATTGAAGAACAGGCA+GGG | - | chr8_2:66019673-66019692 | None:intergenic | 30.0% | |
| TTTAATTAAGCTTATGCTCG+TGG | + | chr8_2:66019695-66019714 | Msa1262990:intron | 30.0% | |
| ! | GGTTTTTGAATCATCAACAA+TGG | + | chr8_2:66019793-66019812 | Msa1262990:intron | 30.0% |
| TTTCTTATGATGTCATGTTG+TGG | + | chr8_2:66019868-66019887 | Msa1262990:intron | 30.0% | |
| TGTGCCAACATTATAAACTA+AGG | + | chr8_2:66019917-66019936 | Msa1262990:intron | 30.0% | |
| GTGCCAACATTATAAACTAA+GGG | + | chr8_2:66019918-66019937 | Msa1262990:intron | 30.0% | |
| !!! | ACTTGATAGCTAGCTTTTAA+GGG | - | chr8_2:66020246-66020265 | None:intergenic | 30.0% |
| TCAAAACCAACTGGTATTAT+TGG | + | chr8_2:66020450-66020469 | Msa1262990:intron | 30.0% | |
| AGAATTTACAGTAAAACACC+TGG | + | chr8_2:66020492-66020511 | Msa1262990:intron | 30.0% | |
| AGTTAGGTTAAGTTAGTTAG+CGG | - | chr8_2:66020637-66020656 | None:intergenic | 30.0% | |
| TTAGTTAAGAAGAGTTCACT+TGG | - | chr8_2:66020662-66020681 | None:intergenic | 30.0% | |
| CAAGCTATGAAGTTGTTTAT+AGG | - | chr8_2:66020713-66020732 | None:intergenic | 30.0% | |
| ! | ATTTTCTTTTGCCATCATGT+GGG | - | chr8_2:66021024-66021043 | None:intergenic | 30.0% |
| AAAGAAAATGTGAGACTTTG+TGG | + | chr8_2:66021035-66021054 | Msa1262990:CDS | 30.0% | |
| AGAAGTGAGAAATCTATATC+TGG | + | chr8_2:66021300-66021319 | Msa1262990:intron | 30.0% | |
| GAAGTGAGAAATCTATATCT+GGG | + | chr8_2:66021301-66021320 | Msa1262990:intron | 30.0% | |
| GTAAAGTAACCTTAAGCATA+TGG | + | chr8_2:66021375-66021394 | Msa1262990:intron | 30.0% | |
| ! | TATGGTTTGTAGCAAAAACA+AGG | - | chr8_2:66021467-66021486 | None:intergenic | 30.0% |
| CAATTTATTCTTGCACTATG+AGG | - | chr8_2:66021566-66021585 | None:intergenic | 30.0% | |
| AATGATCAAGTCCTTTACTT+TGG | - | chr8_2:66021707-66021726 | None:intergenic | 30.0% | |
| ! | TTGATCATTTAGTGACCTTT+TGG | + | chr8_2:66021718-66021737 | Msa1262990:intron | 30.0% |
| !!! | GTGACCTTTTGGTTTTTAAA+TGG | + | chr8_2:66021729-66021748 | Msa1262990:intron | 30.0% |
| ! | GAACAATTTATTTGAGACCT+TGG | - | chr8_2:66021798-66021817 | None:intergenic | 30.0% |
| !! | TTTGGTGTATGTCTTAGTTT+TGG | + | chr8_2:66022017-66022036 | Msa1262990:intron | 30.0% |
| !!! | TTTTTTTCCTAGAGGTTACA+AGG | + | chr8_2:66022235-66022254 | Msa1262990:intron | 30.0% |
| GGACCTCAATTATATTAATC+TGG | + | chr8_2:66022624-66022643 | Msa1262990:three_prime_UTR | 30.0% | |
| CCTCCAGATTAATATAATTG+AGG | - | chr8_2:66022630-66022649 | None:intergenic | 30.0% | |
| CCTCAATTATATTAATCTGG+AGG | + | chr8_2:66022627-66022646 | Msa1262990:three_prime_UTR | 30.0% | |
| AATGTTACAAAACTCAAGTC+AGG | - | chr8_2:66022785-66022804 | None:intergenic | 30.0% | |
| !! | GACTTGAGTTTTGTAACATT+TGG | + | chr8_2:66022785-66022804 | Msa1262990:three_prime_UTR | 30.0% |
| AAGAATGAGAAGACAAGTAG+TGG | - | chr8_2:66019555-66019574 | None:intergenic | 35.0% | |
| TGTCTTCTCATTCTTCTTCT+CGG | + | chr8_2:66019560-66019579 | Msa1262990:five_prime_UTR | 35.0% | |
| CAAAATATTGAAGAACAGGC+AGG | - | chr8_2:66019674-66019693 | None:intergenic | 35.0% | |
| !!! | GACTTGATAGCTAGCTTTTA+AGG | - | chr8_2:66020247-66020266 | None:intergenic | 35.0% |
| ! | TGTATATACTTGGAGCCTTT+TGG | - | chr8_2:66020549-66020568 | None:intergenic | 35.0% |
| CATGTTGCCTATAGATAAGA+GGG | - | chr8_2:66020600-66020619 | None:intergenic | 35.0% | |
| ACATGTTGCCTATAGATAAG+AGG | - | chr8_2:66020601-66020620 | None:intergenic | 35.0% | |
| AAGAGTTCACTTGGTAAGTT+AGG | - | chr8_2:66020653-66020672 | None:intergenic | 35.0% | |
| TGAACTTCAAGGAAAGATGA+GGG | + | chr8_2:66020885-66020904 | Msa1262990:CDS | 35.0% | |
| ! | CATTTTCTTTTGCCATCATG+TGG | - | chr8_2:66021025-66021044 | None:intergenic | 35.0% |
| GGTAGAGTTCAAATACATAG+CGG | - | chr8_2:66021090-66021109 | None:intergenic | 35.0% | |
| TGAACTCTACCATAAGAGAA+AGG | + | chr8_2:66021099-66021118 | Msa1262990:CDS | 35.0% | |
| !! | TCCATTTTGCAATTAGGTTG+CGG | - | chr8_2:66021174-66021193 | None:intergenic | 35.0% |
| ! | CCTTCTTCCATTTTGCAATT+AGG | - | chr8_2:66021180-66021199 | None:intergenic | 35.0% |
| CCTAATTGCAAAATGGAAGA+AGG | + | chr8_2:66021177-66021196 | Msa1262990:CDS | 35.0% | |
| GAGATAGAATAAGTACGATC+AGG | + | chr8_2:66021276-66021295 | Msa1262990:intron | 35.0% | |
| ! | GCTTAAGGTTACTTTACCTA+GGG | - | chr8_2:66021372-66021391 | None:intergenic | 35.0% |
| ! | TGCTTAAGGTTACTTTACCT+AGG | - | chr8_2:66021373-66021392 | None:intergenic | 35.0% |
| GAGACATATCCATATGCTTA+AGG | - | chr8_2:66021387-66021406 | None:intergenic | 35.0% | |
| !!! | CCTTCTCGAGCAATTTTTTA+TGG | - | chr8_2:66021485-66021504 | None:intergenic | 35.0% |
| CCATAAAAAATTGCTCGAGA+AGG | + | chr8_2:66021482-66021501 | Msa1262990:intron | 35.0% | |
| GACAAGAATGTTAGGAGAAA+TGG | + | chr8_2:66021617-66021636 | Msa1262990:intron | 35.0% | |
| AAGAATGTTAGGAGAAATGG+TGG | + | chr8_2:66021620-66021639 | Msa1262990:intron | 35.0% | |
| GAGTAAACTCTCCAAAGTAA+AGG | + | chr8_2:66021693-66021712 | Msa1262990:intron | 35.0% | |
| TAAAGTTATGCCTGTGAGTA+AGG | + | chr8_2:66021770-66021789 | Msa1262990:intron | 35.0% | |
| AGTGAACTACAATCAGCTTT+AGG | - | chr8_2:66021847-66021866 | None:intergenic | 35.0% | |
| TAAAGCTGATTGTAGTTCAC+TGG | + | chr8_2:66021846-66021865 | Msa1262990:intron | 35.0% | |
| !!! | TCTTAGTTTTGGCTCCATAT+AGG | + | chr8_2:66022028-66022047 | Msa1262990:intron | 35.0% |
| CATCGTAGTTGCTATCTATA+AGG | + | chr8_2:66022122-66022141 | Msa1262990:intron | 35.0% | |
| GCAGTAAACAACAGTGATAT+TGG | - | chr8_2:66022308-66022327 | None:intergenic | 35.0% | |
| GTTATAGAGTGTGTTCATTG+TGG | + | chr8_2:66022571-66022590 | Msa1262990:CDS | 35.0% | |
| TATTAATCTGGAGGGTTTGT+TGG | + | chr8_2:66022636-66022655 | Msa1262990:three_prime_UTR | 35.0% | |
| !!! | AAGTCAGGTTTTGAACTATG+CGG | - | chr8_2:66022770-66022789 | None:intergenic | 35.0% |
| !! | TTGTATTGACTATTGAGCGA+AGG | - | chr8_2:66022884-66022903 | None:intergenic | 35.0% |
| CTTTGCTTATTGTCGTCTGA+GGG | + | chr8_2:66019641-66019660 | Msa1262990:five_prime_UTR | 40.0% | |
| CTTATGATGTCATGTTGTGG+TGG | + | chr8_2:66019871-66019890 | Msa1262990:intron | 40.0% | |
| ! | AACTAAGGGTTTGTTTGGGT+TGG | + | chr8_2:66019932-66019951 | Msa1262990:intron | 40.0% |
| AAAAACAATTAGGGCCCGTT+TGG | - | chr8_2:66020137-66020156 | None:intergenic | 40.0% | |
| !!! | GATAGCTAGCTTTTAAGGGA+GGG | - | chr8_2:66020242-66020261 | None:intergenic | 40.0% |
| !!! | TGATAGCTAGCTTTTAAGGG+AGG | - | chr8_2:66020243-66020262 | None:intergenic | 40.0% |
| AATTCCACATCAGGCAGTAT+GGG | - | chr8_2:66020293-66020312 | None:intergenic | 40.0% | |
| AAATTCCACATCAGGCAGTA+TGG | - | chr8_2:66020294-66020313 | None:intergenic | 40.0% | |
| TCCAGTTGATCAAAACCAAC+TGG | + | chr8_2:66020441-66020460 | Msa1262990:intron | 40.0% | |
| !!! | ACCAGTTGGTTTTGATCAAC+TGG | - | chr8_2:66020445-66020464 | None:intergenic | 40.0% |
| TAGAGTCTCTCTAATACTCC+AGG | - | chr8_2:66020513-66020532 | None:intergenic | 40.0% | |
| GATAAGATAGCTCACTCTCT+AGG | + | chr8_2:66020572-66020591 | Msa1262990:intron | 40.0% | |
| !! | ACTCGGCTTGTCTTTACTTT+TGG | - | chr8_2:66020823-66020842 | None:intergenic | 40.0% |
| AGCCTTCTGGGTATTTAACT+CGG | - | chr8_2:66020840-66020859 | None:intergenic | 40.0% | |
| AGTTAAATACCCAGAAGGCT+GGG | + | chr8_2:66020840-66020859 | Msa1262990:CDS | 40.0% | |
| CAATTAATTCCCAGCCTTCT+GGG | - | chr8_2:66020852-66020871 | None:intergenic | 40.0% | |
| TCAATTAATTCCCAGCCTTC+TGG | - | chr8_2:66020853-66020872 | None:intergenic | 40.0% | |
| GTGAACTTCAAGGAAAGATG+AGG | + | chr8_2:66020884-66020903 | Msa1262990:CDS | 40.0% | |
| ACCGCAACCTAATTGCAAAA+TGG | + | chr8_2:66021170-66021189 | Msa1262990:CDS | 40.0% | |
| GTTACACTTTCCTACTCTTG+TGG | - | chr8_2:66021350-66021369 | None:intergenic | 40.0% | |
| CAGTAGGACTGCAAATGATA+CGG | + | chr8_2:66021421-66021440 | Msa1262990:intron | 40.0% | |
| AGTAGGACTGCAAATGATAC+GGG | + | chr8_2:66021422-66021441 | Msa1262990:intron | 40.0% | |
| GCTCTCTGATCATCCTAAAA+AGG | + | chr8_2:66021518-66021537 | Msa1262990:intron | 40.0% | |
| TCCTAAAAAGGTCATTTCGC+AGG | + | chr8_2:66021530-66021549 | Msa1262990:intron | 40.0% | |
| CCTAAAAAGGTCATTTCGCA+GGG | + | chr8_2:66021531-66021550 | Msa1262990:intron | 40.0% | |
| TTAGGAGAAATGGTGGTAGA+AGG | + | chr8_2:66021627-66021646 | Msa1262990:intron | 40.0% | |
| ! | CTGATTGTAGTTCACTGGTT+TGG | + | chr8_2:66021851-66021870 | Msa1262990:intron | 40.0% |
| TTACCAAGATTCACGCCATT+TGG | - | chr8_2:66021968-66021987 | None:intergenic | 40.0% | |
| ACAACAACCTTGTAACCTCT+AGG | - | chr8_2:66022245-66022264 | None:intergenic | 40.0% | |
| !! | TTTGTTTCTGAATTGCAGCC+TGG | + | chr8_2:66022448-66022467 | Msa1262990:intron | 40.0% |
| TGTGTTCATTGTGGTTGCAA+GGG | + | chr8_2:66022580-66022599 | Msa1262990:CDS | 40.0% | |
| ACAGTAGTGATACAACGTAG+AGG | - | chr8_2:66022689-66022708 | None:intergenic | 40.0% | |
| ACTTCACAAGAGCTATGCAT+TGG | + | chr8_2:66022716-66022735 | Msa1262990:three_prime_UTR | 40.0% | |
| CTTCACAAGAGCTATGCATT+GGG | + | chr8_2:66022717-66022736 | Msa1262990:three_prime_UTR | 40.0% | |
| ATTCTTCTTCTCGGTTGTCG+AGG | + | chr8_2:66019569-66019588 | Msa1262990:five_prime_UTR | 45.0% | |
| AATAAGCAAAGGTGAGCGGT+GGG | - | chr8_2:66019632-66019651 | None:intergenic | 45.0% | |
| CGACAATAAGCAAAGGTGAG+CGG | - | chr8_2:66019636-66019655 | None:intergenic | 45.0% | |
| CCTCAGACGACAATAAGCAA+AGG | - | chr8_2:66019643-66019662 | None:intergenic | 45.0% | |
| CCTTTGCTTATTGTCGTCTG+AGG | + | chr8_2:66019640-66019659 | Msa1262990:five_prime_UTR | 45.0% | |
| !! | AGGGAGGGTACTTATCAAGT+TGG | - | chr8_2:66020227-66020246 | None:intergenic | 45.0% |
| AGTAGGGCAAATTCCACATC+AGG | - | chr8_2:66020302-66020321 | None:intergenic | 45.0% | |
| TCACTCTACAACGCTGTACT+TGG | + | chr8_2:66020358-66020377 | Msa1262990:intron | 45.0% | |
| TGATCAACTGGAATCAGAGC+TGG | - | chr8_2:66020433-66020452 | None:intergenic | 45.0% | |
| TAGACTCTCCCAATGCCAAA+AGG | + | chr8_2:66020531-66020550 | Msa1262990:intron | 45.0% | |
| ! | ACTTGGAGCCTTTTGGCATT+GGG | - | chr8_2:66020542-66020561 | None:intergenic | 45.0% |
| ! | TACTTGGAGCCTTTTGGCAT+TGG | - | chr8_2:66020543-66020562 | None:intergenic | 45.0% |
| CTAGGCTCCCTCTTATCTAT+AGG | + | chr8_2:66020590-66020609 | Msa1262990:intron | 45.0% | |
| AGCCGAGTTAAATACCCAGA+AGG | + | chr8_2:66020835-66020854 | Msa1262990:CDS | 45.0% | |
| GAGTTAAATACCCAGAAGGC+TGG | + | chr8_2:66020839-66020858 | Msa1262990:CDS | 45.0% | |
| CCTTGAAGTTCACGAAGTGT+AGG | - | chr8_2:66020877-66020896 | None:intergenic | 45.0% | |
| CCTACACTTCGTGAACTTCA+AGG | + | chr8_2:66020874-66020893 | Msa1262990:CDS | 45.0% | |
| CTTCAAGGAAAGATGAGGGA+AGG | + | chr8_2:66020889-66020908 | Msa1262990:CDS | 45.0% | |
| CATTCTCAGCTGCCACATAA+AGG | - | chr8_2:66021000-66021019 | None:intergenic | 45.0% | |
| CAAATACATAGCGGCTCTTC+TGG | - | chr8_2:66021081-66021100 | None:intergenic | 45.0% | |
| TGGTGGTAAAAGGCAAGTGT+TGG | - | chr8_2:66021330-66021349 | None:intergenic | 45.0% | |
| CCTACTCTTGTGGTGGTAAA+AGG | - | chr8_2:66021340-66021359 | None:intergenic | 45.0% | |
| ! | CCTTTTACCACCACAAGAGT+AGG | + | chr8_2:66021337-66021356 | Msa1262990:intron | 45.0% |
| ACACTTTCCTACTCTTGTGG+TGG | - | chr8_2:66021347-66021366 | None:intergenic | 45.0% | |
| ! | GAGTAGGAAAGTGTAACCCT+AGG | + | chr8_2:66021353-66021372 | Msa1262990:intron | 45.0% |
| TCTCCTACCACATACACAGT+AGG | + | chr8_2:66021405-66021424 | Msa1262990:intron | 45.0% | |
| AGTCCTACTGTGTATGTGGT+AGG | - | chr8_2:66021411-66021430 | None:intergenic | 45.0% | |
| TTGCAGTCCTACTGTGTATG+TGG | - | chr8_2:66021415-66021434 | None:intergenic | 45.0% | |
| ! | CCCTGCGAAATGACCTTTTT+AGG | - | chr8_2:66021534-66021553 | None:intergenic | 45.0% |
| GGATCTAGCTAACAAGCATC+AGG | - | chr8_2:66021589-66021608 | None:intergenic | 45.0% | |
| TTCTGTCTGTGGGCAAATTG+TGG | - | chr8_2:66021911-66021930 | None:intergenic | 45.0% | |
| TGCCCACAGACAGAATTCTA+AGG | + | chr8_2:66021916-66021935 | Msa1262990:intron | 45.0% | |
| GCCCACAGACAGAATTCTAA+GGG | + | chr8_2:66021917-66021936 | Msa1262990:intron | 45.0% | |
| CCCCTTAGAATTCTGTCTGT+GGG | - | chr8_2:66021921-66021940 | None:intergenic | 45.0% | |
| CCCACAGACAGAATTCTAAG+GGG | + | chr8_2:66021918-66021937 | Msa1262990:intron | 45.0% | |
| GAACCAAATGGCGTGAATCT+TGG | + | chr8_2:66021962-66021981 | Msa1262990:intron | 45.0% | |
| CAACATAGGCGTTCATAACC+AGG | - | chr8_2:66022469-66022488 | None:intergenic | 45.0% | |
| ! | ATGAACGCCTATGTTGCTTG+AGG | + | chr8_2:66022473-66022492 | Msa1262990:CDS | 45.0% |
| GTATGCACCTCAAGCAACAT+AGG | - | chr8_2:66022483-66022502 | None:intergenic | 45.0% | |
| GTGTGTTCATTGTGGTTGCA+AGG | + | chr8_2:66022579-66022598 | Msa1262990:CDS | 45.0% | |
| TTGTGCAAGTGGGGATTGAT+TGG | + | chr8_2:66022603-66022622 | Msa1262990:exon | 45.0% | |
| !!! | ATTTTGTTTTTTTTTTTTAT+AGG | + | chr8_2:66021232-66021251 | Msa1262990:intron | 5.0% |
| CAATAAGCAAAGGTGAGCGG+TGG | - | chr8_2:66019633-66019652 | None:intergenic | 50.0% | |
| ! | TGCTCAATGGAGTGTCTGAG+TGG | - | chr8_2:66020269-66020288 | None:intergenic | 50.0% |
| AGGCAGTATGGGATGCTCAA+TGG | - | chr8_2:66020282-66020301 | None:intergenic | 50.0% | |
| !! | TCATGGACGGTGCTACAGTA+GGG | - | chr8_2:66020318-66020337 | None:intergenic | 50.0% |
| ! | AACGCTGTACTTGGCCTTTC+TGG | + | chr8_2:66020367-66020386 | Msa1262990:intron | 50.0% |
| GAATCAGAGCTGGTTGTTGG+TGG | - | chr8_2:66020423-66020442 | None:intergenic | 50.0% | |
| CTGGAATCAGAGCTGGTTGT+TGG | - | chr8_2:66020426-66020445 | None:intergenic | 50.0% | |
| GCTGAGAATGACCCACATGA+TGG | + | chr8_2:66021010-66021029 | Msa1262990:intron | 50.0% | |
| !! | TAGGATGATCAGAGAGCACC+AGG | - | chr8_2:66021515-66021534 | None:intergenic | 50.0% |
| GCCCCTTAGAATTCTGTCTG+TGG | - | chr8_2:66021922-66021941 | None:intergenic | 50.0% | |
| CACTCTGCATACACAAGTGG+TGG | - | chr8_2:66022527-66022546 | None:intergenic | 50.0% | |
| ! | TTGTGTATGCAGAGTGCCCA+AGG | + | chr8_2:66022531-66022550 | Msa1262990:CDS | 50.0% |
| GTTGCAAGGGTTGTGCAAGT+GGG | + | chr8_2:66022593-66022612 | Msa1262990:CDS | 50.0% | |
| TTGCAAGGGTTGTGCAAGTG+GGG | + | chr8_2:66022594-66022613 | Msa1262990:CDS | 50.0% | |
| GAGGTAAACTCCGTCGCTTC+CGG | + | chr8_2:66019588-66019607 | Msa1262990:five_prime_UTR | 55.0% | |
| GCATCCCATACTGCCTGATG+TGG | + | chr8_2:66020286-66020305 | Msa1262990:intron | 55.0% | |
| !! | CTCATGGACGGTGCTACAGT+AGG | - | chr8_2:66020319-66020338 | None:intergenic | 55.0% |
| CGCAAGTCAGCTCTCATGGA+CGG | - | chr8_2:66020331-66020350 | None:intergenic | 55.0% | |
| !! | CGTCCATGAGAGCTGACTTG+CGG | + | chr8_2:66020329-66020348 | Msa1262990:intron | 55.0% |
| TGTCCGCAAGTCAGCTCTCA+TGG | - | chr8_2:66020335-66020354 | None:intergenic | 55.0% | |
| TACGGAGGAGCTGACCAGAA+AGG | - | chr8_2:66020384-66020403 | None:intergenic | 55.0% | |
| ! | TTTCTGGTCAGCTCCTCCGT+AGG | + | chr8_2:66020383-66020402 | Msa1262990:intron | 55.0% |
| !! | GGTTGTTGGTGGCTCGGAAA+GGG | - | chr8_2:66020412-66020431 | None:intergenic | 55.0% |
| !! | TGGTTGTTGGTGGCTCGGAA+AGG | - | chr8_2:66020413-66020432 | None:intergenic | 55.0% |
| !! | AGAGCTGGTTGTTGGTGGCT+CGG | - | chr8_2:66020418-66020437 | None:intergenic | 55.0% |
| ! | GCTCGAGAAGGTATAGCACC+TGG | + | chr8_2:66021494-66021513 | Msa1262990:intron | 55.0% |
| TGCCTGTGAGTAAGGAGCCA+AGG | + | chr8_2:66021778-66021797 | Msa1262990:intron | 55.0% | |
| GACCTTGGCTCCTTACTCAC+AGG | - | chr8_2:66021783-66021802 | None:intergenic | 55.0% | |
| GTGGCGAAATTGTGATCGCG+TGG | - | chr8_2:66022508-66022527 | None:intergenic | 55.0% | |
| GGGCACTCTGCATACACAAG+TGG | - | chr8_2:66022530-66022549 | None:intergenic | 55.0% | |
| TTCTCCTCCCTGAGCTCCTT+GGG | - | chr8_2:66022550-66022569 | None:intergenic | 55.0% | |
| GGTTGCAAGGGTTGTGCAAG+TGG | + | chr8_2:66022592-66022611 | Msa1262990:CDS | 55.0% | |
| ! | GTGGTTGGTCGCACAACTGC+CGG | - | chr8_2:66019610-66019629 | None:intergenic | 60.0% |
| AAAGGTGAGCGGTGGGTGGT+TGG | - | chr8_2:66019625-66019644 | None:intergenic | 60.0% | |
| AAGCAAAGGTGAGCGGTGGG+TGG | - | chr8_2:66019629-66019648 | None:intergenic | 60.0% | |
| TCGGAAAGGGCTACCTACGG+AGG | - | chr8_2:66020399-66020418 | None:intergenic | 60.0% | |
| GGCTCGGAAAGGGCTACCTA+CGG | - | chr8_2:66020402-66020421 | None:intergenic | 60.0% | |
| ! | CAGAGTGCCCAAGGAGCTCA+GGG | + | chr8_2:66022540-66022559 | Msa1262990:CDS | 60.0% |
| CTTCTCCTCCCTGAGCTCCT+TGG | - | chr8_2:66022551-66022570 | None:intergenic | 60.0% | |
| CAAGGAGCTCAGGGAGGAGA+AGG | + | chr8_2:66022549-66022568 | Msa1262990:CDS | 60.0% | |
| CGCACAACTGCCGGAAGCGA+CGG | - | chr8_2:66019601-66019620 | None:intergenic | 65.0% | |
| ! | GCAGAGTGCCCAAGGAGCTC+AGG | + | chr8_2:66022539-66022558 | Msa1262990:CDS | 65.0% |
| AGTGCCCAAGGAGCTCAGGG+AGG | + | chr8_2:66022543-66022562 | Msa1262990:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 66019482 | 66022929 | 66019482 | ID=Msa1262990;Name=Msa1262990 |
| chr8_2 | mRNA | 66019482 | 66022929 | 66019482 | ID=Msa1262990-mRNA-1;Parent=Msa1262990;Name=Msa1262990-mRNA-1;_AED=0.08;_eAED=0.08;_QI=187|1|1|1|0.66|0.75|4|308|145 |
| chr8_2 | exon | 66019482 | 66019662 | 66019482 | ID=Msa1262990-mRNA-1:exon:21510;Parent=Msa1262990-mRNA-1 |
| chr8_2 | exon | 66020811 | 66020910 | 66020811 | ID=Msa1262990-mRNA-1:exon:21511;Parent=Msa1262990-mRNA-1 |
| chr8_2 | exon | 66021011 | 66021198 | 66021011 | ID=Msa1262990-mRNA-1:exon:21512;Parent=Msa1262990-mRNA-1 |
| chr8_2 | exon | 66022466 | 66022929 | 66022466 | ID=Msa1262990-mRNA-1:exon:21513;Parent=Msa1262990-mRNA-1 |
| chr8_2 | five_prime_UTR | 66019482 | 66019662 | 66019482 | ID=Msa1262990-mRNA-1:five_prime_utr;Parent=Msa1262990-mRNA-1 |
| chr8_2 | five_prime_UTR | 66020811 | 66020816 | 66020811 | ID=Msa1262990-mRNA-1:five_prime_utr;Parent=Msa1262990-mRNA-1 |
| chr8_2 | CDS | 66020817 | 66020910 | 66020817 | ID=Msa1262990-mRNA-1:cds;Parent=Msa1262990-mRNA-1 |
| chr8_2 | CDS | 66021011 | 66021198 | 66021011 | ID=Msa1262990-mRNA-1:cds;Parent=Msa1262990-mRNA-1 |
| chr8_2 | CDS | 66022466 | 66022621 | 66022466 | ID=Msa1262990-mRNA-1:cds;Parent=Msa1262990-mRNA-1 |
| chr8_2 | three_prime_UTR | 66022622 | 66022929 | 66022622 | ID=Msa1262990-mRNA-1:three_prime_utr;Parent=Msa1262990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
