Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0882430 | XP_013451618.1 | 99.796 | 490 | 1 | 0 | 1 | 490 | 1 | 490 | 0.0 | 1018 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0882430 | sp|Q2R3K3|LCB2A_ORYSJ | 85.507 | 483 | 70 | 0 | 1 | 483 | 1 | 483 | 0.0 | 884 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0882430 | A0A072U8D8 | 99.796 | 490 | 1 | 0 | 1 | 490 | 1 | 490 | 0.0 | 1018 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000180 | Msa0882430 | -0.806475 | 8.080409e-50 | -8.615850e-47 |
Msa0008250 | Msa0882430 | -0.805337 | 1.401506e-49 | -8.615850e-47 |
Msa0019570 | Msa0882430 | 0.819745 | 9.882234e-53 | -8.615850e-47 |
Msa0039610 | Msa0882430 | 0.847239 | 1.311248e-59 | -8.615850e-47 |
Msa0040550 | Msa0882430 | 0.825197 | 5.343802e-54 | -8.615850e-47 |
Msa0043240 | Msa0882430 | 0.809643 | 1.709624e-50 | -8.615850e-47 |
Msa0044250 | Msa0882430 | -0.820686 | 6.015929e-53 | -8.615850e-47 |
Msa0044320 | Msa0882430 | -0.816920 | 4.311275e-52 | -8.615850e-47 |
Msa0051600 | Msa0882430 | -0.819889 | 9.163070e-53 | -8.615850e-47 |
Msa0053960 | Msa0882430 | -0.806672 | 7.340229e-50 | -8.615850e-47 |
Msa0059880 | Msa0882430 | 0.825457 | 4.638280e-54 | -8.615850e-47 |
Msa0076650 | Msa0882430 | 0.818423 | 1.975711e-52 | -8.615850e-47 |
Msa0087250 | Msa0882430 | 0.815707 | 8.051744e-52 | -8.615850e-47 |
Msa0090040 | Msa0882430 | 0.807561 | 4.759148e-50 | -8.615850e-47 |
Msa0090760 | Msa0882430 | -0.827653 | 1.388892e-54 | -8.615850e-47 |
Msa0091470 | Msa0882430 | -0.813787 | 2.144983e-51 | -8.615850e-47 |
Msa0092390 | Msa0882430 | -0.800756 | 1.241079e-48 | -8.615850e-47 |
Msa0100840 | Msa0882430 | -0.813443 | 2.552548e-51 | -8.615850e-47 |
Msa0615430 | Msa0882430 | -0.815990 | 6.965727e-52 | -8.615850e-47 |
Msa0618490 | Msa0882430 | -0.801554 | 8.525219e-49 | -8.615850e-47 |
Msa0621870 | Msa0882430 | -0.826758 | 2.275636e-54 | -8.615850e-47 |
Msa0629820 | Msa0882430 | -0.842709 | 2.191624e-58 | -8.615850e-47 |
Msa0629980 | Msa0882430 | -0.839691 | 1.361833e-57 | -8.615850e-47 |
Msa0645820 | Msa0882430 | -0.816339 | 5.820330e-52 | -8.615850e-47 |
Msa0646340 | Msa0882430 | -0.813110 | 3.021123e-51 | -8.615850e-47 |
Msa0652610 | Msa0882430 | 0.803220 | 3.867461e-49 | -8.615850e-47 |
Msa0654880 | Msa0882430 | -0.828778 | 7.440177e-55 | -8.615850e-47 |
Msa0658280 | Msa0882430 | -0.803575 | 3.265108e-49 | -8.615850e-47 |
Msa0685890 | Msa0882430 | -0.804836 | 1.784240e-49 | -8.615850e-47 |
Msa0698480 | Msa0882430 | -0.806467 | 8.111561e-50 | -8.615850e-47 |
Msa0698650 | Msa0882430 | -0.815141 | 1.076398e-51 | -8.615850e-47 |
Msa0766900 | Msa0882430 | -0.823944 | 1.054478e-53 | -8.615850e-47 |
Msa0814160 | Msa0882430 | 0.816410 | 5.609688e-52 | -8.615850e-47 |
Msa0815750 | Msa0882430 | 0.806631 | 7.491273e-50 | -8.615850e-47 |
Msa0130340 | Msa0882430 | -0.804179 | 2.445407e-49 | -8.615850e-47 |
Msa0135330 | Msa0882430 | 0.810884 | 9.232920e-51 | -8.615850e-47 |
Msa0135400 | Msa0882430 | -0.818192 | 2.228631e-52 | -8.615850e-47 |
Msa0150910 | Msa0882430 | 0.818724 | 1.688303e-52 | -8.615850e-47 |
Msa0178820 | Msa0882430 | 0.800128 | 1.666592e-48 | -8.615850e-47 |
Msa0179830 | Msa0882430 | 0.811527 | 6.695046e-51 | -8.615850e-47 |
Msa0182310 | Msa0882430 | 0.802835 | 4.646974e-49 | -8.615850e-47 |
Msa0199740 | Msa0882430 | -0.826148 | 3.179489e-54 | -8.615850e-47 |
Msa0202150 | Msa0882430 | -0.801995 | 6.920409e-49 | -8.615850e-47 |
Msa0212550 | Msa0882430 | 0.825393 | 4.803242e-54 | -8.615850e-47 |
Msa0216810 | Msa0882430 | 0.813665 | 2.282043e-51 | -8.615850e-47 |
Msa0368620 | Msa0882430 | 0.811548 | 6.627634e-51 | -8.615850e-47 |
Msa0373220 | Msa0882430 | -0.802986 | 4.324348e-49 | -8.615850e-47 |
Msa0378390 | Msa0882430 | 0.845480 | 3.956761e-59 | -8.615850e-47 |
Msa0383700 | Msa0882430 | 0.804906 | 1.724778e-49 | -8.615850e-47 |
Msa0388260 | Msa0882430 | 0.813382 | 2.632496e-51 | -8.615850e-47 |
Msa0389710 | Msa0882430 | 0.813706 | 2.234796e-51 | -8.615850e-47 |
Msa0405250 | Msa0882430 | 0.817747 | 2.809636e-52 | -8.615850e-47 |
Msa0416040 | Msa0882430 | 0.806709 | 7.212185e-50 | -8.615850e-47 |
Msa0425320 | Msa0882430 | -0.800546 | 1.369929e-48 | -8.615850e-47 |
Msa0427090 | Msa0882430 | -0.813222 | 2.854539e-51 | -8.615850e-47 |
Msa0427740 | Msa0882430 | 0.855251 | 7.153183e-62 | -8.615850e-47 |
Msa0427970 | Msa0882430 | 0.856557 | 2.969044e-62 | -8.615850e-47 |
Msa0440310 | Msa0882430 | -0.811709 | 6.112484e-51 | -8.615850e-47 |
Msa0453940 | Msa0882430 | 0.827772 | 1.300846e-54 | -8.615850e-47 |
Msa0468020 | Msa0882430 | -0.800589 | 1.342653e-48 | -8.615850e-47 |
Msa0480260 | Msa0882430 | 0.818432 | 1.965939e-52 | -8.615850e-47 |
Msa0245110 | Msa0882430 | -0.801341 | 9.424823e-49 | -8.615850e-47 |
Msa0252930 | Msa0882430 | 0.830931 | 2.223841e-55 | -8.615850e-47 |
Msa0258410 | Msa0882430 | -0.801230 | 9.931731e-49 | -8.615850e-47 |
Msa0258700 | Msa0882430 | 0.835879 | 1.297707e-56 | -8.615850e-47 |
Msa0264940 | Msa0882430 | 0.808851 | 2.527750e-50 | -8.615850e-47 |
Msa0270840 | Msa0882430 | -0.800974 | 1.120198e-48 | -8.615850e-47 |
Msa0274890 | Msa0882430 | -0.808297 | 3.318820e-50 | -8.615850e-47 |
Msa0297950 | Msa0882430 | 0.852458 | 4.554954e-61 | -8.615850e-47 |
Msa0302990 | Msa0882430 | 0.808099 | 3.657590e-50 | -8.615850e-47 |
Msa0335890 | Msa0882430 | 0.843921 | 1.040935e-58 | -8.615850e-47 |
Msa0352200 | Msa0882430 | -0.815743 | 7.906636e-52 | -8.615850e-47 |
Msa0508160 | Msa0882430 | 0.806758 | 7.041664e-50 | -8.615850e-47 |
Msa0516330 | Msa0882430 | -0.802239 | 6.165805e-49 | -8.615850e-47 |
Msa0518570 | Msa0882430 | 0.857169 | 1.960376e-62 | -8.615850e-47 |
Msa0533270 | Msa0882430 | -0.810156 | 1.326210e-50 | -8.615850e-47 |
Msa0535020 | Msa0882430 | -0.800322 | 1.521649e-48 | -8.615850e-47 |
Msa0550760 | Msa0882430 | -0.801124 | 1.044036e-48 | -8.615850e-47 |
Msa0557260 | Msa0882430 | 0.802644 | 5.088417e-49 | -8.615850e-47 |
Msa0561420 | Msa0882430 | -0.841233 | 5.380669e-58 | -8.615850e-47 |
Msa0854840 | Msa0882430 | 0.809993 | 1.437394e-50 | -8.615850e-47 |
Msa0855090 | Msa0882430 | 0.815657 | 8.262566e-52 | -8.615850e-47 |
Msa0882430 | Msa0897990 | 0.818090 | 2.349649e-52 | -8.615850e-47 |
Msa0882430 | Msa0902810 | -0.801870 | 7.342777e-49 | -8.615850e-47 |
Msa0882430 | Msa0909720 | -0.819652 | 1.037722e-52 | -8.615850e-47 |
Msa0882430 | Msa0945320 | 0.812310 | 4.522522e-51 | -8.615850e-47 |
Msa0882430 | Msa0947520 | 0.910531 | 1.688671e-82 | -8.615850e-47 |
Msa0882430 | Msa0951770 | -0.814763 | 1.305541e-51 | -8.615850e-47 |
Msa0882430 | Msa1014530 | -0.812698 | 3.719315e-51 | -8.615850e-47 |
Msa0882430 | Msa1024350 | 0.803824 | 2.898313e-49 | -8.615850e-47 |
Msa0882430 | Msa1035510 | -0.811181 | 7.961430e-51 | -8.615850e-47 |
Msa0882430 | Msa1035790 | -0.800835 | 1.196355e-48 | -8.615850e-47 |
Msa0882430 | Msa1054890 | -0.801091 | 1.060141e-48 | -8.615850e-47 |
Msa0882430 | Msa1069770 | 0.806487 | 8.032561e-50 | -8.615850e-47 |
Msa0882430 | Msa1096280 | -0.829438 | 5.147786e-55 | -8.615850e-47 |
Msa0882430 | Msa1107950 | -0.810476 | 1.131048e-50 | -8.615850e-47 |
Msa0882430 | Msa1113210 | -0.807094 | 5.978283e-50 | -8.615850e-47 |
Msa0882430 | Msa1117280 | -0.836476 | 9.149994e-57 | -8.615850e-47 |
Msa0882430 | Msa1129540 | 0.800758 | 1.240198e-48 | -8.615850e-47 |
Msa0882430 | Msa1129600 | 0.807012 | 6.221597e-50 | -8.615850e-47 |
Msa0882430 | Msa1157030 | -0.803062 | 4.170504e-49 | -8.615850e-47 |
Msa0882430 | Msa1168960 | 0.807030 | 6.168378e-50 | -8.615850e-47 |
Msa0882430 | Msa1169050 | 0.803497 | 3.389175e-49 | -8.615850e-47 |
Msa0882430 | Msa1173000 | -0.801396 | 9.183091e-49 | -8.615850e-47 |
Msa0882430 | Msa1177960 | -0.829176 | 5.958815e-55 | -8.615850e-47 |
Msa0882430 | Msa1194110 | 0.810109 | 1.357145e-50 | -8.615850e-47 |
Msa0882430 | Msa1198870 | -0.810855 | 9.367187e-51 | -8.615850e-47 |
Msa0882430 | Msa1223460 | -0.817316 | 3.513091e-52 | -8.615850e-47 |
Msa0882430 | Msa1223600 | -0.804352 | 2.250700e-49 | -8.615850e-47 |
Msa0882430 | Msa1237750 | -0.802106 | 6.566383e-49 | -8.615850e-47 |
Msa0882430 | Msa1265990 | -0.827074 | 1.912244e-54 | -8.615850e-47 |
Msa0882430 | Msa1287090 | 0.828268 | 9.880345e-55 | -8.615850e-47 |
Msa0882430 | Msa1293060 | -0.818104 | 2.332663e-52 | -8.615850e-47 |
Msa0882430 | Msa1318180 | -0.843984 | 1.001174e-58 | -8.615850e-47 |
Msa0882430 | Msa1326290 | 0.803168 | 3.964389e-49 | -8.615850e-47 |
Msa0882430 | Msa1342280 | 0.849581 | 2.950274e-60 | -8.615850e-47 |
Msa0882430 | Msa1345030 | 0.812327 | 4.482776e-51 | -8.615850e-47 |
Msa0882430 | Msa1351370 | -0.806847 | 6.741941e-50 | -8.615850e-47 |
Msa0882430 | Msa1393550 | -0.806987 | 6.299159e-50 | -8.615850e-47 |
Msa0882430 | Msa1400700 | 0.820022 | 8.540894e-53 | -8.615850e-47 |
Msa0882430 | Msa1401070 | 0.826124 | 3.221531e-54 | -8.615850e-47 |
Msa0882430 | Msa1404690 | -0.802165 | 6.386757e-49 | -8.615850e-47 |
Msa0882430 | Msa1422900 | -0.818704 | 1.706201e-52 | -8.615850e-47 |
Msa0882430 | Msa1423660 | 0.841549 | 4.442390e-58 | -8.615850e-47 |
Msa0882430 | Msa1426310 | -0.809081 | 2.256610e-50 | -8.615850e-47 |
Msa0882430 | Msa1427370 | -0.801501 | 8.741197e-49 | -8.615850e-47 |
Msa0882430 | Msa1449510 | -0.801119 | 1.046276e-48 | -8.615850e-47 |
Msa0882430 | Msa1456620 | -0.811473 | 6.878919e-51 | -8.615850e-47 |
Msa0882430 | Msa1460310 | 0.808115 | 3.628344e-50 | -8.615850e-47 |
Msa0882430 | Msa1460530 | -0.805387 | 1.367848e-49 | -8.615850e-47 |
Msa0882430 | Msa1462600 | -0.817578 | 3.066645e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0882430 | MtrunA17_Chr6g0461991 | 99.796 | 490 | 1 | 0 | 1 | 490 | 1 | 490 | 0.0 | 1018 |
Msa0882430 | MtrunA17_Chr3g0099931 | 25.131 | 382 | 258 | 7 | 101 | 467 | 111 | 479 | 1.23e-34 | 135 |
Msa0882430 | MtrunA17_Chr5g0430851 | 24.869 | 382 | 259 | 7 | 101 | 467 | 111 | 479 | 2.98e-34 | 134 |
Msa0882430 | MtrunA17_Chr3g0078851 | 25.882 | 340 | 206 | 6 | 143 | 462 | 142 | 455 | 6.30e-22 | 98.6 |
Msa0882430 | MtrunA17_Chr1g0153091 | 27.679 | 224 | 125 | 5 | 103 | 297 | 16 | 231 | 2.33e-16 | 78.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0882430 | AT5G23670.1 | 85.031 | 481 | 72 | 0 | 1 | 481 | 1 | 481 | 0.0 | 876 |
Msa0882430 | AT5G23670.2 | 85.031 | 481 | 72 | 0 | 1 | 481 | 1 | 481 | 0.0 | 876 |
Msa0882430 | AT3G48780.2 | 83.542 | 480 | 79 | 0 | 1 | 480 | 1 | 480 | 0.0 | 864 |
Msa0882430 | AT3G48780.1 | 83.542 | 480 | 79 | 0 | 1 | 480 | 1 | 480 | 0.0 | 864 |
Msa0882430 | AT3G48790.1 | 76.149 | 348 | 76 | 1 | 143 | 490 | 7 | 347 | 0.0 | 561 |
Msa0882430 | AT3G48790.2 | 75.776 | 322 | 71 | 1 | 169 | 490 | 1 | 315 | 0.0 | 518 |
Msa0882430 | AT4G36480.2 | 25.745 | 369 | 246 | 8 | 103 | 456 | 112 | 467 | 7.86e-32 | 128 |
Msa0882430 | AT4G36480.1 | 25.745 | 369 | 246 | 8 | 103 | 456 | 112 | 467 | 7.86e-32 | 128 |
Msa0882430 | AT5G04620.2 | 25.641 | 390 | 247 | 8 | 95 | 466 | 97 | 461 | 1.82e-26 | 112 |
Msa0882430 | AT5G04620.1 | 27.193 | 342 | 207 | 7 | 143 | 466 | 11 | 328 | 3.46e-26 | 109 |
Msa0882430 | AT4G36480.3 | 29.565 | 230 | 152 | 4 | 103 | 329 | 112 | 334 | 1.93e-25 | 107 |
Msa0882430 | AT5G04620.3 | 25.926 | 270 | 170 | 5 | 95 | 346 | 97 | 354 | 1.31e-19 | 91.7 |
Find 166 sgRNAs with CRISPR-Local
Find 750 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCGGATCTTTGCAAGTTTC+TGG | -0.006417 | 6_1:+31737127 | None:intergenic |
CCTTGAGAAGGCAGGGATTT+TGG | 0.130317 | 6_1:+31737005 | None:intergenic |
TTTATAGGCATATACATATT+TGG | 0.174681 | 6_1:-31739562 | Msa0882430:intron |
TTCCAGGGCCTATGTGTTCT+TGG | 0.189231 | 6_1:+31740403 | None:intergenic |
TAGATTATATCTTCGGATTC+AGG | 0.217064 | 6_1:-31745579 | Msa0882430:intron |
TGAAGGAACCTGAAGATTAT+TGG | 0.257979 | 6_1:+31745882 | None:intergenic |
AACCACAACTCAATTGTTAA+TGG | 0.265196 | 6_1:-31741154 | Msa0882430:CDS |
TGCTATTCTTCCGGTCTTGA+TGG | 0.282578 | 6_1:-31741294 | Msa0882430:CDS |
TCTTCCATAAAAGTTATTCT+TGG | 0.284948 | 6_1:-31737304 | Msa0882430:CDS |
TCCGAAAACAAAAGATTATA+TGG | 0.285098 | 6_1:+31735739 | None:intergenic |
TACGGTTTGCTCTTCGCTTT+CGG | 0.288207 | 6_1:-31745949 | Msa0882430:CDS |
TAAAGCATGATTGGCATTAC+AGG | 0.302338 | 6_1:+31737036 | None:intergenic |
GCCAGTAGCAATGGGGTTGC+TGG | 0.321595 | 6_1:+31736840 | None:intergenic |
GAGCAAACCGTAACTGAAAT+AGG | 0.338413 | 6_1:+31745960 | None:intergenic |
GCTCTCGAACCAACGCGATT+CGG | 0.339423 | 6_1:-31746082 | Msa0882430:five_prime_UTR |
GGTTATGCACCGATCTGTTT+AGG | 0.340054 | 6_1:-31745623 | Msa0882430:CDS |
AGATGGGATTTGAAGTTCTT+GGG | 0.340919 | 6_1:-31737071 | Msa0882430:CDS |
AAGATGGGATTTGAAGTTCT+TGG | 0.344461 | 6_1:-31737072 | Msa0882430:CDS |
AATAACCATTATCTTCTTCC+AGG | 0.349116 | 6_1:+31740387 | None:intergenic |
TCGGATCTTTGCAAGTTTCT+GGG | 0.355382 | 6_1:+31737128 | None:intergenic |
AAGACATCGACTTACTTTAC+TGG | 0.356195 | 6_1:+31741632 | None:intergenic |
CATGGTGATTTCAAACTAAC+TGG | 0.358111 | 6_1:-31735820 | Msa0882430:three_prime_UTR |
TTGGGATCATATAACTATCT+TGG | 0.360855 | 6_1:-31741606 | Msa0882430:CDS |
AAGGGGTGTTTGTGAGCTCT+TGG | 0.362856 | 6_1:-31739502 | Msa0882430:CDS |
GGGACATTCACCAAATCATT+TGG | 0.367081 | 6_1:-31739447 | Msa0882430:CDS |
CTCTCGAACCAACGCGATTC+GGG | 0.369620 | 6_1:-31746081 | Msa0882430:five_prime_UTR |
TGAAGGGAAGGGAAGGGAAG+GGG | 0.372598 | 6_1:+31746132 | None:intergenic |
GTGCAGTTCCAATAATCTTC+AGG | 0.379110 | 6_1:-31745890 | Msa0882430:intron |
TGTTGCTTCGTTGGTTCAGC+AGG | 0.388343 | 6_1:+31735960 | None:intergenic |
GTTAATGGTGCGCGGGGATC+AGG | 0.391282 | 6_1:-31741139 | Msa0882430:CDS |
AAGTAAAATATGAAAATGTA+TGG | 0.396011 | 6_1:+31746177 | None:intergenic |
TCCACATGATCCAAATGATT+TGG | 0.396058 | 6_1:+31739437 | None:intergenic |
GATATTATTTGTTGTGCAGC+TGG | 0.396206 | 6_1:+31737325 | None:intergenic |
GCATCAGGAGCACTTGATAT+TGG | 0.396763 | 6_1:+31741898 | None:intergenic |
CATCTTCGAAAGTGAGGTCT+TGG | 0.398848 | 6_1:-31735779 | Msa0882430:three_prime_UTR |
GACAAACTCTGCTATTCTTC+CGG | 0.400770 | 6_1:-31741303 | Msa0882430:CDS |
ATTGGAGCTGTGGGCAAGAC+AGG | 0.401548 | 6_1:-31739525 | Msa0882430:CDS |
AGACCTTACCAAGGCCTTGC+AGG | 0.401800 | 6_1:-31736778 | Msa0882430:intron |
CAGGTCAGAATTGCAGAAGA+TGG | 0.405068 | 6_1:-31737088 | Msa0882430:CDS |
ATATTCGTAGATTATATCTT+CGG | 0.409758 | 6_1:-31745586 | Msa0882430:CDS |
GACAGCACTTCACAATGAAT+TGG | 0.415510 | 6_1:-31741387 | Msa0882430:CDS |
CCTTCTCAAGGGAGTGCCTC+AGG | 0.415913 | 6_1:-31736993 | Msa0882430:CDS |
ATCTTCGCCGCCGGCGGTGA+TGG | 0.416441 | 6_1:+31746015 | None:intergenic |
GCTATTCTTCCGGTCTTGAT+GGG | 0.419350 | 6_1:-31741293 | Msa0882430:CDS |
AGGTTATATTGCAGGATCTA+AGG | 0.420449 | 6_1:-31739415 | Msa0882430:intron |
TGTTTGTGAGCTCTTGGGTG+TGG | 0.428313 | 6_1:-31739496 | Msa0882430:CDS |
TCATGTGGAGGTTATATTGC+AGG | 0.428713 | 6_1:-31739423 | Msa0882430:CDS |
AGCAGTGTAGGTGATCTAAT+TGG | 0.428852 | 6_1:-31735996 | Msa0882430:CDS |
TCCAGCAACCCCATTGCTAC+TGG | 0.437632 | 6_1:-31736841 | Msa0882430:CDS |
GCTGGGTTGTAAAGCATGAT+TGG | 0.438158 | 6_1:+31737027 | None:intergenic |
GCATATCAGCTTCTCATTCA+AGG | 0.439438 | 6_1:-31736803 | Msa0882430:CDS |
GAACCAACGCGATTCGGGTT+CGG | 0.440299 | 6_1:-31746076 | Msa0882430:five_prime_UTR |
GGCGGTGATGGTGGCGGTGT+TGG | 0.441956 | 6_1:+31746027 | None:intergenic |
CTCACAACCTATTTCAGTTA+CGG | 0.442612 | 6_1:-31745967 | Msa0882430:CDS |
AGGGGTGTTTGTGAGCTCTT+GGG | 0.442767 | 6_1:-31739501 | Msa0882430:CDS |
CTCAATTGTTAATGGTGCGC+GGG | 0.442812 | 6_1:-31741146 | Msa0882430:CDS |
TGTTGGCGAGGCGGCGGTGA+GGG | 0.445332 | 6_1:+31746044 | None:intergenic |
ATGTATGGGTTGTGTTTGGC+TGG | 0.445783 | 6_1:+31746192 | None:intergenic |
CTCCAAGCACTTGCAGTACC+CGG | 0.449501 | 6_1:-31741524 | Msa0882430:CDS |
GCTTTCTCTCTCTAGATTGA+AGG | 0.457137 | 6_1:+31746115 | None:intergenic |
ATGAATACGAAGATTATTGA+AGG | 0.465959 | 6_1:-31735878 | Msa0882430:three_prime_UTR |
GTGCTCTAGCCAGTAGCAAT+GGG | 0.469424 | 6_1:+31736832 | None:intergenic |
GAAAATGTATGGGTTGTGTT+TGG | 0.472341 | 6_1:+31746188 | None:intergenic |
GCGAGGCGGCGGTGAGGGAT+CGG | 0.473802 | 6_1:+31746049 | None:intergenic |
AAAGTTATTCTTGGCGAAGA+TGG | 0.473909 | 6_1:-31737295 | Msa0882430:CDS |
AGGCACTCCCTTGAGAAGGC+AGG | 0.474944 | 6_1:+31736997 | None:intergenic |
TCTTGTTGTTGTTGCTTCGT+TGG | 0.475549 | 6_1:+31735951 | None:intergenic |
GAAGTTGCATAAAGATGTGC+AGG | 0.479396 | 6_1:+31737358 | None:intergenic |
TTGCATATAGCTATGACCTC+TGG | 0.480390 | 6_1:+31740322 | None:intergenic |
CTCTCTCTAGATTGAAGGGA+AGG | 0.484764 | 6_1:+31746120 | None:intergenic |
ATTGAAGGGAAGGGAAGGGA+AGG | 0.488457 | 6_1:+31746130 | None:intergenic |
TTGAAGGGAAGGGAAGGGAA+GGG | 0.489158 | 6_1:+31746131 | None:intergenic |
AGTAAGTCGATGTCTTAACT+TGG | 0.490464 | 6_1:-31741625 | Msa0882430:CDS |
ACCCGGGTACTGCAAGTGCT+TGG | 0.490715 | 6_1:+31741522 | None:intergenic |
ATCGCTATCATCTTCGCCGC+CGG | 0.490856 | 6_1:+31746006 | None:intergenic |
TGCTGATATTGATATTATGA+TGG | 0.491151 | 6_1:-31739469 | Msa0882430:CDS |
CAAGACCTCACTTTCGAAGA+TGG | 0.491790 | 6_1:+31735780 | None:intergenic |
TAGGCCCTGGAAGAAGATAA+TGG | 0.496204 | 6_1:-31740392 | Msa0882430:CDS |
ACCAAATCATTTGGATCATG+TGG | 0.496543 | 6_1:-31739438 | Msa0882430:CDS |
AGGTCAGAATTGCAGAAGAT+GGG | 0.499602 | 6_1:-31737087 | Msa0882430:CDS |
GAGCTGTGGGCAAGACAGGA+AGG | 0.499919 | 6_1:-31739521 | Msa0882430:CDS |
ATAGAGCTGTAGTTATTGTA+AGG | 0.500227 | 6_1:-31735855 | Msa0882430:three_prime_UTR |
TGGCGGTGTTGGCGAGGCGG+CGG | 0.500793 | 6_1:+31746038 | None:intergenic |
TATCAAGTGCTCCTGATGCT+TGG | 0.504033 | 6_1:-31741894 | Msa0882430:CDS |
TTGGATGAAGCACACAGCAT+TGG | 0.505271 | 6_1:-31739543 | Msa0882430:CDS |
ATATTATTTGTTGTGCAGCT+GGG | 0.510480 | 6_1:+31737326 | None:intergenic |
GCTGTGGGCAAGACAGGAAG+GGG | 0.511167 | 6_1:-31739519 | Msa0882430:CDS |
AAGATAATGGTTATTGTGGA+GGG | 0.512429 | 6_1:-31740379 | Msa0882430:CDS |
CATATCAGCTTCTCATTCAA+GGG | 0.517556 | 6_1:-31736802 | Msa0882430:CDS |
TCGTAGGTTATTAGCAGTGT+AGG | 0.517821 | 6_1:-31736008 | Msa0882430:intron |
AACACTTCTTCTAGATGTGC+TGG | 0.517825 | 6_1:+31740451 | None:intergenic |
GTGTTGGCGAGGCGGCGGTG+AGG | 0.518340 | 6_1:+31746043 | None:intergenic |
CACCATTAACAATTGAGTTG+TGG | 0.520038 | 6_1:+31741152 | None:intergenic |
TTGGCTGGAGATGATTCAAA+TGG | 0.520076 | 6_1:+31746207 | None:intergenic |
AATACACACCTGCAAGGCCT+TGG | 0.520353 | 6_1:+31736770 | None:intergenic |
CCAAAATCCCTGCCTTCTCA+AGG | 0.521117 | 6_1:-31737005 | Msa0882430:CDS |
GCCGCCGGCGGTGATGGTGG+CGG | 0.521750 | 6_1:+31746021 | None:intergenic |
TATACACATCATCTAATGAC+GGG | 0.522159 | 6_1:+31735706 | None:intergenic |
ACTACATCAAACCAAGCATC+AGG | 0.526562 | 6_1:+31741883 | None:intergenic |
GGCGAAGATGGTTCAAGTCG+AGG | 0.527475 | 6_1:-31737283 | Msa0882430:intron |
GAAGATAATGGTTATTGTGG+AGG | 0.528355 | 6_1:-31740380 | Msa0882430:CDS |
AGCCAAGAACACATAGGCCC+TGG | 0.529238 | 6_1:-31740405 | Msa0882430:CDS |
AACACCTACCTCCATCCACC+CGG | 0.529626 | 6_1:+31741505 | None:intergenic |
CGTGCTCTAGCCAGTAGCAA+TGG | 0.529943 | 6_1:+31736831 | None:intergenic |
AACACCGCCACCATCACCGC+CGG | 0.530695 | 6_1:-31746025 | Msa0882430:five_prime_UTR |
GAAGAAGATAATGGTTATTG+TGG | 0.532678 | 6_1:-31740383 | Msa0882430:CDS |
CTTTCTCTCTCTAGATTGAA+GGG | 0.536115 | 6_1:+31746116 | None:intergenic |
TGATGGTGGCGGTGTTGGCG+AGG | 0.537970 | 6_1:+31746032 | None:intergenic |
AGCACACAGCATTGGAGCTG+TGG | 0.542128 | 6_1:-31739535 | Msa0882430:CDS |
TTCGCCGCCGGCGGTGATGG+TGG | 0.545187 | 6_1:+31746018 | None:intergenic |
TCTTCCGGTCTTGATGGGGA+AGG | 0.547239 | 6_1:-31741288 | Msa0882430:intron |
GATGGGATTTGAAGTTCTTG+GGG | 0.548122 | 6_1:-31737070 | Msa0882430:CDS |
GTTGTGAGTGCAGTGAGATA+CGG | 0.551717 | 6_1:+31745982 | None:intergenic |
ATAACCATTATCTTCTTCCA+GGG | 0.552346 | 6_1:+31740388 | None:intergenic |
GGCACTCCCTTGAGAAGGCA+GGG | 0.562551 | 6_1:+31736998 | None:intergenic |
CCAACCTTCCCCATCAAGAC+CGG | 0.565338 | 6_1:+31741284 | None:intergenic |
ACTTGCAGTACCCGGGTGGA+TGG | 0.568260 | 6_1:-31741516 | Msa0882430:CDS |
GCACACAGCATTGGAGCTGT+GGG | 0.572363 | 6_1:-31739534 | Msa0882430:CDS |
GTAAGTCGATGTCTTAACTT+GGG | 0.573929 | 6_1:-31741624 | Msa0882430:CDS |
CTATTCTTCCGGTCTTGATG+GGG | 0.578052 | 6_1:-31741292 | Msa0882430:CDS |
GCTATCATCTTCGCCGCCGG+CGG | 0.580983 | 6_1:+31746009 | None:intergenic |
TGTTGCCATCTTCGAAAGTG+AGG | 0.583134 | 6_1:-31735785 | Msa0882430:three_prime_UTR |
TATTATTTGTTGTGCAGCTG+GGG | 0.583240 | 6_1:+31737327 | None:intergenic |
TCCAAGCACTTGCAGTACCC+GGG | 0.584468 | 6_1:-31741523 | Msa0882430:CDS |
AGTAAAATATGAAAATGTAT+GGG | 0.585225 | 6_1:+31746178 | None:intergenic |
CCTGAGGCACTCCCTTGAGA+AGG | 0.586563 | 6_1:+31736993 | None:intergenic |
CTATACACATCATCTAATGA+CGG | 0.586611 | 6_1:+31735705 | None:intergenic |
AGCTGTGGGCAAGACAGGAA+GGG | 0.586982 | 6_1:-31739520 | Msa0882430:CDS |
TCTCTCTAGATTGAAGGGAA+GGG | 0.587907 | 6_1:+31746121 | None:intergenic |
ATATATTCAATTGAATTCAA+CGG | 0.588470 | 6_1:-31746232 | None:intergenic |
GAGGGGATATACAGCATGGA+AGG | 0.589376 | 6_1:-31740361 | Msa0882430:CDS |
ACACCTGCAAGGCCTTGGTA+AGG | 0.589912 | 6_1:+31736775 | None:intergenic |
ACCGCCACCATCACCGCCGG+CGG | 0.590809 | 6_1:-31746022 | Msa0882430:five_prime_UTR |
TGGTGGCGGTGTTGGCGAGG+CGG | 0.591566 | 6_1:+31746035 | None:intergenic |
TCTAGATTGAAGGGAAGGGA+AGG | 0.592678 | 6_1:+31746125 | None:intergenic |
TGGCTGGAGATGATTCAAAT+GGG | 0.593940 | 6_1:+31746208 | None:intergenic |
ATGCTCTCACATTCTGCCTG+AGG | 0.595562 | 6_1:+31736977 | None:intergenic |
TCTTCAAGTCCTAAACAGAT+CGG | 0.597403 | 6_1:+31745614 | None:intergenic |
GCTGATATTGATATTATGAT+GGG | 0.597573 | 6_1:-31739468 | Msa0882430:CDS |
AGCACTTCACAATGAATTGG+AGG | 0.599950 | 6_1:-31741384 | Msa0882430:CDS |
CTAGATTGAAGGGAAGGGAA+GGG | 0.600043 | 6_1:+31746126 | None:intergenic |
AGATAATGGTTATTGTGGAG+GGG | 0.602319 | 6_1:-31740378 | Msa0882430:CDS |
TGCAGTACCCGGGTGGATGG+AGG | 0.604267 | 6_1:-31741513 | Msa0882430:intron |
GTTGCTTCGTTGGTTCAGCA+GGG | 0.605794 | 6_1:+31735961 | None:intergenic |
CAAAATCCCTGCCTTCTCAA+GGG | 0.606834 | 6_1:-31737004 | Msa0882430:CDS |
AAATCATTTGGATCATGTGG+AGG | 0.617237 | 6_1:-31739435 | Msa0882430:CDS |
ACTCAATTGTTAATGGTGCG+CGG | 0.623218 | 6_1:-31741147 | Msa0882430:CDS |
GATCCGAACCCGAATCGCGT+TGG | 0.625681 | 6_1:+31746073 | None:intergenic |
ACGAAGCAACAACAACAAGA+TGG | 0.626909 | 6_1:-31735948 | Msa0882430:CDS |
TCAATTGTTAATGGTGCGCG+GGG | 0.631969 | 6_1:-31741145 | Msa0882430:CDS |
TGTGGAGGGGATATACAGCA+TGG | 0.637466 | 6_1:-31740365 | Msa0882430:CDS |
AGAGCTTTGCAAACTTCCAG+AGG | 0.643274 | 6_1:-31740338 | Msa0882430:CDS |
TTCAATGTATCAATCACTCG+AGG | 0.654322 | 6_1:+31741555 | None:intergenic |
ACACCTACCTCCATCCACCC+GGG | 0.655848 | 6_1:+31741506 | None:intergenic |
CAGTTAGTTTGAAATCACCA+TGG | 0.660874 | 6_1:+31735821 | None:intergenic |
ATTCAAAATACACACCTGCA+AGG | 0.666529 | 6_1:+31736764 | None:intergenic |
GTTACGAGAACAAATTGCTG+AGG | 0.666746 | 6_1:-31740431 | Msa0882430:CDS |
ATTATTTGTTGTGCAGCTGG+GGG | 0.677207 | 6_1:+31737328 | None:intergenic |
TTACGAGAACAAATTGCTGA+GGG | 0.680475 | 6_1:-31740430 | Msa0882430:CDS |
TGCTCTAGCCAGTAGCAATG+GGG | 0.685686 | 6_1:+31736833 | None:intergenic |
AAGCACTTGCAGTACCCGGG+TGG | 0.689971 | 6_1:-31741520 | Msa0882430:CDS |
AGGGACAGCCAAGAACACAT+AGG | 0.690788 | 6_1:-31740411 | Msa0882430:CDS |
TTCAAGGGAAGACCTTACCA+AGG | 0.690942 | 6_1:-31736787 | Msa0882430:CDS |
ATACACATCATCTAATGACG+GGG | 0.694297 | 6_1:+31735707 | None:intergenic |
AAGTTGCATAAAGATGTGCA+GGG | 0.717646 | 6_1:+31737359 | None:intergenic |
CTGATATTGATATTATGATG+GGG | 0.726376 | 6_1:-31739467 | Msa0882430:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GAAAAAAAATAGTTATTAAA+CGG | + | chr6_1:31738492-31738511 | None:intergenic | 10.0% |
!! | AAATAAATAAAACATCTATT+AGG | + | chr6_1:31738994-31739013 | None:intergenic | 10.0% |
!!! | ATTTAATTATTATTTGTTGA+AGG | - | chr6_1:31739434-31739453 | Msa0882430:CDS | 10.0% |
!!! | TTTAATTATTATTTGTTGAA+GGG | - | chr6_1:31739435-31739454 | Msa0882430:CDS | 10.0% |
!!! | AATATTCTTTTCAATTTTTT+AGG | - | chr6_1:31740007-31740026 | Msa0882430:intron | 10.0% |
!! | ATTAAAAAATGCATAATTAT+AGG | + | chr6_1:31740033-31740052 | None:intergenic | 10.0% |
!!! | TTTTTTAATTTTTTTGTGTT+AGG | - | chr6_1:31740044-31740063 | Msa0882430:intron | 10.0% |
!!! | TTTTTAATTTTTTTGTGTTA+GGG | - | chr6_1:31740045-31740064 | Msa0882430:intron | 10.0% |
!!! | AATGAAAAATTTACTTTTTA+GGG | + | chr6_1:31741045-31741064 | None:intergenic | 10.0% |
!!! | AAATGAAAAATTTACTTTTT+AGG | + | chr6_1:31741046-31741065 | None:intergenic | 10.0% |
!! | AGTAAAATATGAAAATGTAT+GGG | + | chr6_1:31735652-31735671 | None:intergenic | 15.0% |
!! | AAGTAAAATATGAAAATGTA+TGG | + | chr6_1:31735653-31735672 | None:intergenic | 15.0% |
!! | AAATGCATAAACAAAAAAAT+TGG | + | chr6_1:31735989-31736008 | None:intergenic | 15.0% |
!! | ATAGATTATTGTTGAAATTT+GGG | + | chr6_1:31737280-31737299 | None:intergenic | 15.0% |
!! | AATAGATTATTGTTGAAATT+TGG | + | chr6_1:31737281-31737300 | None:intergenic | 15.0% |
!!! | ATTTGTTTTTTAAGTAGTTT+TGG | - | chr6_1:31738290-31738309 | Msa0882430:intron | 15.0% |
!!! | TACACATTGATTTTTTTTAA+AGG | + | chr6_1:31738614-31738633 | None:intergenic | 15.0% |
!! | ATGTGTATATATATAGAAAA+AGG | - | chr6_1:31738627-31738646 | Msa0882430:intron | 15.0% |
!!! | AGTTTTGTTTCAATTTTTTT+GGG | - | chr6_1:31738785-31738804 | Msa0882430:intron | 15.0% |
!!! | CTCATGTTTTTTTTTTTTTT+TGG | - | chr6_1:31739216-31739235 | Msa0882430:intron | 15.0% |
!!! | GTTTTTTTTTTTTTTTGGAA+TGG | - | chr6_1:31739221-31739240 | Msa0882430:intron | 15.0% |
!!! | TTTTTCATGTTTTGAATTTT+TGG | - | chr6_1:31739888-31739907 | Msa0882430:intron | 15.0% |
!!! | TTTTAATTTTTTTGTGTTAG+GGG | - | chr6_1:31740046-31740065 | Msa0882430:intron | 15.0% |
!!! | AATTTTTCATTTCAATAGAT+TGG | - | chr6_1:31741054-31741073 | Msa0882430:intron | 15.0% |
!! | AGTTCATTTAAAAAAAATTC+GGG | + | chr6_1:31741677-31741696 | None:intergenic | 15.0% |
!! | CAGTTCATTTAAAAAAAATT+CGG | + | chr6_1:31741678-31741697 | None:intergenic | 15.0% |
!!! | AGAGTTTATAAATGTTATTT+TGG | + | chr6_1:31744640-31744659 | None:intergenic | 15.0% |
!! | ACAATAAATAAAAGTTAAAG+TGG | + | chr6_1:31745198-31745217 | None:intergenic | 15.0% |
!! | CAAAAAAATTGGAAAAAAGA+AGG | + | chr6_1:31735978-31735997 | None:intergenic | 20.0% |
!! | ATATTCGTAGATTATATCTT+CGG | - | chr6_1:31736241-31736260 | Msa0882430:intron | 20.0% |
!!! | GTTTCTATTATAGTTTTTCT+AGG | + | chr6_1:31736548-31736567 | None:intergenic | 20.0% |
!! | TATAATAGAAACTGTTAAGA+AGG | - | chr6_1:31736556-31736575 | Msa0882430:intron | 20.0% |
!! | TTTCAATGATTAAAGATGTT+TGG | - | chr6_1:31736794-31736813 | Msa0882430:CDS | 20.0% |
!!! | GCTATTTCTATAATAAAAGA+TGG | - | chr6_1:31737001-31737020 | Msa0882430:CDS | 20.0% |
!! | AAAAGCTTATGTATAATTGT+TGG | - | chr6_1:31737064-31737083 | Msa0882430:CDS | 20.0% |
!! | TAGATTATTGTTGAAATTTG+GGG | + | chr6_1:31737279-31737298 | None:intergenic | 20.0% |
!! | ATAGCTTAAAAACAGATTAT+AGG | + | chr6_1:31737342-31737361 | None:intergenic | 20.0% |
!!! | TAAGTTTTTTGAATGTGTTT+GGG | + | chr6_1:31737434-31737453 | None:intergenic | 20.0% |
!!! | TTAAGTTTTTTGAATGTGTT+TGG | + | chr6_1:31737435-31737454 | None:intergenic | 20.0% |
!! | CCAAAAATAGCTTATTAAAA+CGG | + | chr6_1:31737519-31737538 | None:intergenic | 20.0% |
!!! | GCTATGATTTTTTAATAGAA+AGG | - | chr6_1:31737733-31737752 | Msa0882430:intron | 20.0% |
!!! | TTTAATAGAAAGGTTTTGAT+TGG | - | chr6_1:31737743-31737762 | Msa0882430:intron | 20.0% |
!!! | TTAATAGAAAGGTTTTGATT+GGG | - | chr6_1:31737744-31737763 | Msa0882430:intron | 20.0% |
!!! | TTTCCATACATTTTCTTATA+TGG | - | chr6_1:31738718-31738737 | Msa0882430:intron | 20.0% |
!! | TAACCATATAAGAAAATGTA+TGG | + | chr6_1:31738724-31738743 | None:intergenic | 20.0% |
!!! | CAGTTTTGTTTCAATTTTTT+TGG | - | chr6_1:31738784-31738803 | Msa0882430:intron | 20.0% |
!!! | GTTTTGTTTCAATTTTTTTG+GGG | - | chr6_1:31738786-31738805 | Msa0882430:intron | 20.0% |
!! | GAAATTGTACTTTAACATTT+AGG | - | chr6_1:31738810-31738829 | Msa0882430:intron | 20.0% |
!! | TTTAGGTCAATTTATTTGAT+TGG | - | chr6_1:31738827-31738846 | Msa0882430:intron | 20.0% |
!! | AATTTCCCAATTAAAAGAAA+AGG | + | chr6_1:31738933-31738952 | None:intergenic | 20.0% |
!! | AATAAAACATCTATTAGGAA+AGG | + | chr6_1:31738989-31739008 | None:intergenic | 20.0% |
!!! | TATTGGGTTAAATTTGTTTA+GGG | + | chr6_1:31739163-31739182 | None:intergenic | 20.0% |
!!! | TTATTGGGTTAAATTTGTTT+AGG | + | chr6_1:31739164-31739183 | None:intergenic | 20.0% |
!! | GTCTAGACAATTTATTTATT+GGG | + | chr6_1:31739179-31739198 | None:intergenic | 20.0% |
!! | AGTCTAGACAATTTATTTAT+TGG | + | chr6_1:31739180-31739199 | None:intergenic | 20.0% |
!! | TGATATCAATAAAACATTCT+CGG | - | chr6_1:31739275-31739294 | Msa0882430:intron | 20.0% |
!! | TAAAGAAAAAGATCCTTATT+TGG | - | chr6_1:31739362-31739381 | Msa0882430:intron | 20.0% |
!! | TATATGTATTTGTTTAACCA+CGG | - | chr6_1:31739649-31739668 | Msa0882430:intron | 20.0% |
!!! | AATAAGAATGGTTCTAATTA+AGG | + | chr6_1:31739741-31739760 | None:intergenic | 20.0% |
!!! | AAATATGTTTTTGTTTTAGC+TGG | - | chr6_1:31739844-31739863 | Msa0882430:intron | 20.0% |
!! | AAAAATAAGTCAAATTACAG+TGG | + | chr6_1:31740108-31740127 | None:intergenic | 20.0% |
!! | TTATCAAATTTATCCAAATG+TGG | - | chr6_1:31740401-31740420 | Msa0882430:CDS | 20.0% |
!! | TCACATACTTTATTAAAAAG+AGG | - | chr6_1:31740809-31740828 | Msa0882430:intron | 20.0% |
!! | CACATACTTTATTAAAAAGA+GGG | - | chr6_1:31740810-31740829 | Msa0882430:intron | 20.0% |
!!! | GGTATGTTAATGATATTTTA+AGG | - | chr6_1:31740842-31740861 | Msa0882430:intron | 20.0% |
!!! | AATTTGAAGGAAATTTTTGT+AGG | - | chr6_1:31740970-31740989 | Msa0882430:intron | 20.0% |
!!! | ATTTGAAGGAAATTTTTGTA+GGG | - | chr6_1:31740971-31740990 | Msa0882430:intron | 20.0% |
!!! | TTTTGTTGCTAAATATCTAT+AGG | - | chr6_1:31741114-31741133 | Msa0882430:CDS | 20.0% |
!!! | ATATATGTATTTTGAATGCT+TGG | - | chr6_1:31741230-31741249 | Msa0882430:intron | 20.0% |
!! | AGCTATATGCAAAAAATATA+AGG | - | chr6_1:31741516-31741535 | Msa0882430:CDS | 20.0% |
!!! | TAGTATTTCTTTTACATGAT+TGG | + | chr6_1:31741784-31741803 | None:intergenic | 20.0% |
!! | TAAAATATTTCACCTCTAAA+AGG | - | chr6_1:31741802-31741821 | Msa0882430:intron | 20.0% |
!!! | AAAATATTTCACCTCTAAAA+GGG | - | chr6_1:31741803-31741822 | Msa0882430:intron | 20.0% |
!!! | TCTAAAAGGGATTTTTTTAT+GGG | - | chr6_1:31741816-31741835 | Msa0882430:intron | 20.0% |
!! | TAAAATATTTCACATCGAAA+AGG | - | chr6_1:31742000-31742019 | Msa0882430:intron | 20.0% |
!! | AAAATATTTCACATCGAAAA+GGG | - | chr6_1:31742001-31742020 | Msa0882430:intron | 20.0% |
!!! | TCTGATATAAGAACTTTTAA+TGG | - | chr6_1:31742051-31742070 | Msa0882430:intron | 20.0% |
!!! | AAAAAGTTTTGTTAAGTGAA+CGG | - | chr6_1:31742088-31742107 | Msa0882430:intron | 20.0% |
!! | AGAAATAAACCAAAGTAAAA+TGG | + | chr6_1:31742230-31742249 | None:intergenic | 20.0% |
!! | TTTATAGGCATATACATATT+TGG | - | chr6_1:31742265-31742284 | Msa0882430:intron | 20.0% |
!! | AATAAGTTACTAAAATATGC+TGG | - | chr6_1:31742477-31742496 | Msa0882430:intron | 20.0% |
!!! | TAGAAATGTTAGTTTCTTAT+AGG | - | chr6_1:31742618-31742637 | Msa0882430:intron | 20.0% |
!! | TAACTAAACTAACTCTTATT+AGG | + | chr6_1:31743118-31743137 | None:intergenic | 20.0% |
!!! | GTTAGTTTAGTTAAGTAATA+AGG | - | chr6_1:31743125-31743144 | Msa0882430:intron | 20.0% |
!! | AGTTAAGTAATAAGGAAATA+CGG | - | chr6_1:31743133-31743152 | Msa0882430:intron | 20.0% |
!! | CAATTTGTGTATTGTATTAT+AGG | - | chr6_1:31743299-31743318 | Msa0882430:intron | 20.0% |
!! | TTAGTTAGTTCATTAGTTAA+TGG | - | chr6_1:31743494-31743513 | Msa0882430:intron | 20.0% |
!! | TAGTTAGTTCATTAGTTAAT+GGG | - | chr6_1:31743495-31743514 | Msa0882430:intron | 20.0% |
!! | TACTATTGTTTGTAATCAAA+GGG | - | chr6_1:31743652-31743671 | Msa0882430:intron | 20.0% |
!! | CTTAATGATATTAATAGAAC+TGG | + | chr6_1:31743843-31743862 | None:intergenic | 20.0% |
!!! | ATCCATAGATTTTAAATAGT+GGG | + | chr6_1:31744074-31744093 | None:intergenic | 20.0% |
!!! | AATCCATAGATTTTAAATAG+TGG | + | chr6_1:31744075-31744094 | None:intergenic | 20.0% |
!!! | CTATTTAAAATCTATGGATT+AGG | - | chr6_1:31744075-31744094 | Msa0882430:intron | 20.0% |
!!! | CCATAGATTTATTTTTTATG+TGG | + | chr6_1:31744174-31744193 | None:intergenic | 20.0% |
!! | CCACATAAAAAATAAATCTA+TGG | - | chr6_1:31744171-31744190 | Msa0882430:intron | 20.0% |
!! | ATATGAAACAAATCCAATAA+AGG | + | chr6_1:31744316-31744335 | None:intergenic | 20.0% |
!!! | TAGGTATGATAGATTTTTTA+TGG | + | chr6_1:31744362-31744381 | None:intergenic | 20.0% |
!! | TTTATAAACTCTGTATACTT+TGG | - | chr6_1:31744648-31744667 | Msa0882430:intron | 20.0% |
!!! | GAATTAAATTGTTTTTGTGT+AGG | - | chr6_1:31744674-31744693 | Msa0882430:intron | 20.0% |
!!! | TGAAAAAATTGCTATTTTCT+CGG | + | chr6_1:31744721-31744740 | None:intergenic | 20.0% |
!! | AAATGCATCTAGTATATTTA+GGG | + | chr6_1:31745455-31745474 | None:intergenic | 20.0% |
!! | TAAATGCATCTAGTATATTT+AGG | + | chr6_1:31745456-31745475 | None:intergenic | 20.0% |
!! | ATATATGCAAAAAATTCCAA+AGG | - | chr6_1:31745638-31745657 | Msa0882430:intron | 20.0% |
!!! | TCCATATAATCTTTTGTTTT+CGG | - | chr6_1:31746087-31746106 | Msa0882430:five_prime_UTR | 20.0% |
! | AACTGTGTGCAATTTAATAA+TGG | + | chr6_1:31736277-31736296 | None:intergenic | 25.0% |
! | TAGTGATTAATAGAACACTA+TGG | - | chr6_1:31736582-31736601 | Msa0882430:intron | 25.0% |
! | AGTGATTAATAGAACACTAT+GGG | - | chr6_1:31736583-31736602 | Msa0882430:intron | 25.0% |
! | TAAATTGAGCTTATCTATAC+TGG | + | chr6_1:31737460-31737479 | None:intergenic | 25.0% |
!!! | CCGTTTTAATAAGCTATTTT+TGG | - | chr6_1:31737516-31737535 | Msa0882430:intron | 25.0% |
! | TAAGCATTTGTGAACTATTT+GGG | + | chr6_1:31737606-31737625 | None:intergenic | 25.0% |
! | ATAAGCATTTGTGAACTATT+TGG | + | chr6_1:31737607-31737626 | None:intergenic | 25.0% |
! | TATCTACCTTTATACACATT+TGG | + | chr6_1:31737658-31737677 | None:intergenic | 25.0% |
! | GTATAAAGGTAGATATAATC+TGG | - | chr6_1:31737663-31737682 | Msa0882430:intron | 25.0% |
!! | TGATATGGTTTTCTAATATC+TGG | - | chr6_1:31737689-31737708 | Msa0882430:intron | 25.0% |
! | TTTCTAATATCTGGATAGTA+TGG | - | chr6_1:31737698-31737717 | Msa0882430:intron | 25.0% |
! | TATGTTCCATATTCTATGTT+GGG | + | chr6_1:31738145-31738164 | None:intergenic | 25.0% |
! | ATATGTTCCATATTCTATGT+TGG | + | chr6_1:31738146-31738165 | None:intergenic | 25.0% |
! | AACATATCATCTATTGATCA+AGG | - | chr6_1:31738159-31738178 | Msa0882430:intron | 25.0% |
! | ATTTCAACACTAGTAGTATT+TGG | + | chr6_1:31738683-31738702 | None:intergenic | 25.0% |
! | TAAGATGGTAAACCATAAAA+TGG | - | chr6_1:31739131-31739150 | Msa0882430:intron | 25.0% |
!! | TTAGGGTTAAATCCATTTTA+TGG | + | chr6_1:31739146-31739165 | None:intergenic | 25.0% |
!!! | GAATGTTTTATTGATATCAG+AGG | + | chr6_1:31739274-31739293 | None:intergenic | 25.0% |
! | GATATCAATAAAACATTCTC+GGG | - | chr6_1:31739276-31739295 | Msa0882430:intron | 25.0% |
! | CAACAAGAAAAAATGAATGA+AGG | + | chr6_1:31739553-31739572 | None:intergenic | 25.0% |
! | TGTTGATATTTCCATACTTT+AGG | + | chr6_1:31739607-31739626 | None:intergenic | 25.0% |
! | ATATGTATTTGTTTAACCAC+GGG | - | chr6_1:31739650-31739669 | Msa0882430:intron | 25.0% |
! | TTCTAATTAAGGATCAAACT+CGG | + | chr6_1:31739730-31739749 | None:intergenic | 25.0% |
! | ATGTACAATGTGAATAAGAA+TGG | + | chr6_1:31739753-31739772 | None:intergenic | 25.0% |
!! | ATTCACATTGTACATACTTT+TGG | - | chr6_1:31739758-31739777 | Msa0882430:intron | 25.0% |
!! | AAACAAAAACATATTTTCCC+TGG | + | chr6_1:31739840-31739859 | None:intergenic | 25.0% |
!!! | TAGTGTTTTGTTATTGTCAT+TGG | + | chr6_1:31739981-31740000 | None:intergenic | 25.0% |
! | TCATTGATCTAATACTTTAC+AGG | - | chr6_1:31740624-31740643 | Msa0882430:intron | 25.0% |
! | CATTGATCTAATACTTTACA+GGG | - | chr6_1:31740625-31740644 | Msa0882430:intron | 25.0% |
! | CTAACTGATAAAACTTATTC+TGG | + | chr6_1:31740763-31740782 | None:intergenic | 25.0% |
! | TTAAAAAGAGGGTCAAATAT+TGG | - | chr6_1:31740821-31740840 | Msa0882430:intron | 25.0% |
!!! | TTGAAAGTTGGTATATACAT+AGG | - | chr6_1:31741001-31741020 | Msa0882430:intron | 25.0% |
!!! | TGAAAGTTGGTATATACATA+GGG | - | chr6_1:31741002-31741021 | Msa0882430:intron | 25.0% |
! | GAGGAATAAAATTAAGATGA+AGG | - | chr6_1:31741172-31741191 | Msa0882430:CDS | 25.0% |
! | AATGGAGAAAGAAAAAGAAA+AGG | + | chr6_1:31741591-31741610 | None:intergenic | 25.0% |
! | CAATTTGAACACTCAAAAAA+TGG | + | chr6_1:31741609-31741628 | None:intergenic | 25.0% |
! | TTAGCTTAAATGAACAAATG+CGG | + | chr6_1:31741748-31741767 | None:intergenic | 25.0% |
!! | CATAAAAAAATCCCTTTTAG+AGG | + | chr6_1:31741817-31741836 | None:intergenic | 25.0% |
!!! | CTCTAAAAGGGATTTTTTTA+TGG | - | chr6_1:31741815-31741834 | Msa0882430:intron | 25.0% |
!!! | AAAAGTTTTGTTAAGTGAAC+GGG | - | chr6_1:31742089-31742108 | Msa0882430:intron | 25.0% |
! | GAATTCTTCCATATCTTTAT+AGG | - | chr6_1:31742250-31742269 | Msa0882430:intron | 25.0% |
! | TGTATATGCCTATAAAGATA+TGG | + | chr6_1:31742261-31742280 | None:intergenic | 25.0% |
! | TGCTGATATTGATATTATGA+TGG | - | chr6_1:31742358-31742377 | Msa0882430:intron | 25.0% |
! | GCTGATATTGATATTATGAT+GGG | - | chr6_1:31742359-31742378 | Msa0882430:intron | 25.0% |
! | CTGATATTGATATTATGATG+GGG | - | chr6_1:31742360-31742379 | Msa0882430:intron | 25.0% |
! | GGTATGTACATTTAAATAGT+AGG | - | chr6_1:31742433-31742452 | Msa0882430:intron | 25.0% |
!!! | TGCAAAATTGATAACCATTT+TGG | + | chr6_1:31742778-31742797 | None:intergenic | 25.0% |
!! | TTGTTATTCTGTAACTTTGA+TGG | + | chr6_1:31742807-31742826 | None:intergenic | 25.0% |
! | CATCTTTCCTATAGATAAAA+GGG | - | chr6_1:31743156-31743175 | Msa0882430:intron | 25.0% |
! | CTCTGATTAATAATATCAGT+TGG | - | chr6_1:31743270-31743289 | Msa0882430:intron | 25.0% |
! | AGGTAAGAAATATGTTGTAT+GGG | + | chr6_1:31743333-31743352 | None:intergenic | 25.0% |
! | ATACAACATATTTCTTACCT+CGG | - | chr6_1:31743333-31743352 | Msa0882430:intron | 25.0% |
! | CTACTATTGTTTGTAATCAA+AGG | - | chr6_1:31743651-31743670 | Msa0882430:intron | 25.0% |
! | TATATCAATACTGAAAATGG+GGG | + | chr6_1:31743685-31743704 | None:intergenic | 25.0% |
! | GTATATCAATACTGAAAATG+GGG | + | chr6_1:31743686-31743705 | None:intergenic | 25.0% |
! | GGTATATCAATACTGAAAAT+GGG | + | chr6_1:31743687-31743706 | None:intergenic | 25.0% |
! | TGGTATATCAATACTGAAAA+TGG | + | chr6_1:31743688-31743707 | None:intergenic | 25.0% |
! | TTCAGAATTAAGACGAATAT+TGG | - | chr6_1:31743765-31743784 | Msa0882430:intron | 25.0% |
!! | TCCATAGATTTTAAATAGTG+GGG | + | chr6_1:31744073-31744092 | None:intergenic | 25.0% |
!!! | TTTATTTTTTATGTGGTGTC+CGG | + | chr6_1:31744167-31744186 | None:intergenic | 25.0% |
! | TGTTTCTTATGTTAAAGTCT+TGG | - | chr6_1:31744404-31744423 | Msa0882430:intron | 25.0% |
! | TCTTCCATAAAAGTTATTCT+TGG | - | chr6_1:31744523-31744542 | Msa0882430:intron | 25.0% |
!!! | GAGAAAATAGCAATTTTTTC+AGG | - | chr6_1:31744720-31744739 | Msa0882430:intron | 25.0% |
!! | GAAAAAGCACAGAAAAAAAA+AGG | + | chr6_1:31744941-31744960 | None:intergenic | 25.0% |
!!! | TTTTTTTTCTGTGCTTTTTC+AGG | - | chr6_1:31744941-31744960 | Msa0882430:intron | 25.0% |
!! | TTTTGAATCTCATCTCATTA+AGG | - | chr6_1:31745078-31745097 | Msa0882430:intron | 25.0% |
! | TTGCGTAATTATTTGTCAAT+GGG | - | chr6_1:31745158-31745177 | Msa0882430:intron | 25.0% |
!! | TAATACTATTAGTCTGTCTT+TGG | - | chr6_1:31745503-31745522 | Msa0882430:intron | 25.0% |
! | TGGAGATGAAAAATCAATAT+TGG | - | chr6_1:31745523-31745542 | Msa0882430:intron | 25.0% |
! | ATGAATACGAAGATTATTGA+AGG | - | chr6_1:31745949-31745968 | Msa0882430:CDS | 25.0% |
! | TCCGAAAACAAAAGATTATA+TGG | + | chr6_1:31746091-31746110 | None:intergenic | 25.0% |
AAAAAGAAGGTGAGAATTGA+AGG | + | chr6_1:31735965-31735984 | None:intergenic | 30.0% | |
TAGATTATATCTTCGGATTC+AGG | - | chr6_1:31736248-31736267 | Msa0882430:intron | 30.0% | |
AGCACTTATAGTAGAAAAGA+TGG | - | chr6_1:31736415-31736434 | Msa0882430:intron | 30.0% | |
GTGATTAATAGAACACTATG+GGG | - | chr6_1:31736584-31736603 | Msa0882430:intron | 30.0% | |
GTGAACTAATTGATACATGA+TGG | - | chr6_1:31736691-31736710 | Msa0882430:intron | 30.0% | |
! | AATTGATACATGATGGAACT+AGG | - | chr6_1:31736698-31736717 | Msa0882430:intron | 30.0% |
GAAGTTAAATTGTTACACGA+TGG | - | chr6_1:31736900-31736919 | Msa0882430:intron | 30.0% | |
CTTGATCAGAGTTTATAAAG+AGG | - | chr6_1:31737208-31737227 | Msa0882430:intron | 30.0% | |
!!! | CTGTTTTTAAGCTATCTTAG+AGG | - | chr6_1:31737347-31737366 | Msa0882430:CDS | 30.0% |
AATAAGCTGAACACAACTTA+TGG | - | chr6_1:31737551-31737570 | Msa0882430:intron | 30.0% | |
ACCTTTATACACATTTGGAT+TGG | + | chr6_1:31737653-31737672 | None:intergenic | 30.0% | |
GATATAATCTGGCTATGATA+TGG | - | chr6_1:31737674-31737693 | Msa0882430:intron | 30.0% | |
GTTATGGAAATTTCCAAGAT+AGG | + | chr6_1:31737795-31737814 | None:intergenic | 30.0% | |
ATAAACGAATCCTCTTGATT+TGG | + | chr6_1:31737819-31737838 | None:intergenic | 30.0% | |
ACACAATTTAATCTCATCTC+CGG | + | chr6_1:31737910-31737929 | None:intergenic | 30.0% | |
ACAGCAAATAAACAATAGCT+CGG | + | chr6_1:31738047-31738066 | None:intergenic | 30.0% | |
ATGTTCCATATTCTATGTTG+GGG | + | chr6_1:31738144-31738163 | None:intergenic | 30.0% | |
AAATCTTTGTATTACTCCTC+TGG | - | chr6_1:31738211-31738230 | Msa0882430:intron | 30.0% | |
!!! | TTTAAGTAGTTTTGGCATAG+AGG | - | chr6_1:31738298-31738317 | Msa0882430:intron | 30.0% |
TGTGGTGATATGCAATATTA+TGG | - | chr6_1:31738358-31738377 | Msa0882430:intron | 30.0% | |
GTGGTGATATGCAATATTAT+GGG | - | chr6_1:31738359-31738378 | Msa0882430:intron | 30.0% | |
TGGTGATATGCAATATTATG+GGG | - | chr6_1:31738360-31738379 | Msa0882430:intron | 30.0% | |
GATACTTCTATGTACAGTAT+TGG | - | chr6_1:31738412-31738431 | Msa0882430:intron | 30.0% | |
!!! | GTTTCAGCTCTAGATTTTAT+TGG | - | chr6_1:31738536-31738555 | Msa0882430:intron | 30.0% |
GGCATAACAAATAAAATCCA+AGG | + | chr6_1:31738662-31738681 | None:intergenic | 30.0% | |
!! | CTAGTGTTGAAATGTGTTTT+TGG | - | chr6_1:31738690-31738709 | Msa0882430:intron | 30.0% |
GGTCAATTTATTTGATTGGA+AGG | - | chr6_1:31738831-31738850 | Msa0882430:intron | 30.0% | |
TGAAGATCTATGATGAATTC+AGG | - | chr6_1:31738900-31738919 | Msa0882430:intron | 30.0% | |
! | TCTGGACCTTTTCTTTTAAT+TGG | - | chr6_1:31738924-31738943 | Msa0882430:intron | 30.0% |
!! | CTGGACCTTTTCTTTTAATT+GGG | - | chr6_1:31738925-31738944 | Msa0882430:intron | 30.0% |
TAACCACATCCTTGAATAAA+GGG | + | chr6_1:31739101-31739120 | None:intergenic | 30.0% | |
TTAACCACATCCTTGAATAA+AGG | + | chr6_1:31739102-31739121 | None:intergenic | 30.0% | |
TTATGGTTTACCATCTTAGA+TGG | + | chr6_1:31739129-31739148 | None:intergenic | 30.0% | |
ATGCTTCTTAGATCCAAATA+AGG | + | chr6_1:31739378-31739397 | None:intergenic | 30.0% | |
TAGGTTTAAATGAGGATCTA+TGG | + | chr6_1:31739588-31739607 | None:intergenic | 30.0% | |
! | CCATACTTTAGGTTTAAATG+AGG | + | chr6_1:31739596-31739615 | None:intergenic | 30.0% |
CCTCATTTAAACCTAAAGTA+TGG | - | chr6_1:31739593-31739612 | Msa0882430:intron | 30.0% | |
TATGTATTTGTTTAACCACG+GGG | - | chr6_1:31739651-31739670 | Msa0882430:intron | 30.0% | |
TCAGATAAGGTTGAATCATT+CGG | - | chr6_1:31739697-31739716 | Msa0882430:intron | 30.0% | |
AAAAATCCTTAAGAGGAAAG+AGG | + | chr6_1:31739805-31739824 | None:intergenic | 30.0% | |
! | TCTTTCCTCTTAAGGATTTT+TGG | - | chr6_1:31739804-31739823 | Msa0882430:intron | 30.0% |
!! | TTAGCTGGTTATTTTCTACA+TGG | - | chr6_1:31739859-31739878 | Msa0882430:intron | 30.0% |
!!! | TCATGTTTTGAATTTTTGGC+AGG | - | chr6_1:31739892-31739911 | Msa0882430:intron | 30.0% |
TTGGGATCATATAACTATCT+TGG | - | chr6_1:31740221-31740240 | Msa0882430:intron | 30.0% | |
AACAAACAAGTCTGTTTCAA+TGG | + | chr6_1:31740365-31740384 | None:intergenic | 30.0% | |
TAGCATCTAATCTATCAAGA+GGG | + | chr6_1:31740589-31740608 | None:intergenic | 30.0% | |
TTAGCATCTAATCTATCAAG+AGG | + | chr6_1:31740590-31740609 | None:intergenic | 30.0% | |
AACCACAACTCAATTGTTAA+TGG | - | chr6_1:31740673-31740692 | Msa0882430:intron | 30.0% | |
!! | ATTCGTGTTTTTCAACACAA+CGG | - | chr6_1:31740718-31740737 | Msa0882430:intron | 30.0% |
TTTATCAGTTAGTTATCGAG+TGG | - | chr6_1:31740771-31740790 | Msa0882430:intron | 30.0% | |
! | TTTTAGTGAGACATGTCTAA+CGG | + | chr6_1:31740923-31740942 | None:intergenic | 30.0% |
TAGACATGTCTCACTAAAAT+TGG | - | chr6_1:31740924-31740943 | Msa0882430:intron | 30.0% | |
AAAATTGGTATCACAATACG+TGG | - | chr6_1:31740939-31740958 | Msa0882430:intron | 30.0% | |
AAATTGGTATCACAATACGT+GGG | - | chr6_1:31740940-31740959 | Msa0882430:intron | 30.0% | |
TAGGGACTAAAATTGAAAGT+TGG | - | chr6_1:31740989-31741008 | Msa0882430:intron | 30.0% | |
! | AATAGATTGGTTGTAGATGA+TGG | - | chr6_1:31741067-31741086 | Msa0882430:intron | 30.0% |
! | TTTTCAGTTTTTCTGTCTGT+TGG | - | chr6_1:31741290-31741309 | Msa0882430:CDS | 30.0% |
! | ACTACTATTCATTTTCTCCT+TGG | - | chr6_1:31741337-31741356 | Msa0882430:CDS | 30.0% |
ATAACCATTATCTTCTTCCA+GGG | + | chr6_1:31741442-31741461 | None:intergenic | 30.0% | |
AATAACCATTATCTTCTTCC+AGG | + | chr6_1:31741443-31741462 | None:intergenic | 30.0% | |
! | GAAGAAGATAATGGTTATTG+TGG | - | chr6_1:31741444-31741463 | Msa0882430:intron | 30.0% |
! | AAGATAATGGTTATTGTGGA+GGG | - | chr6_1:31741448-31741467 | Msa0882430:intron | 30.0% |
AGAAAAGGAAAAATGCATGT+GGG | + | chr6_1:31741576-31741595 | None:intergenic | 30.0% | |
AAGAAAAGGAAAAATGCATG+TGG | + | chr6_1:31741577-31741596 | None:intergenic | 30.0% | |
TTGTACTTGTAACCTGTAAA+TGG | - | chr6_1:31741698-31741717 | Msa0882430:intron | 30.0% | |
ATTTAAGCTAACGACTCAAA+TGG | - | chr6_1:31741757-31741776 | Msa0882430:intron | 30.0% | |
ATGATTACCTGATAGTAAGA+AGG | + | chr6_1:31741967-31741986 | None:intergenic | 30.0% | |
! | TCGAAAAGGGATTTGTTTAT+CGG | - | chr6_1:31742014-31742033 | Msa0882430:intron | 30.0% |
ATTTGTTTATCGGATACTTG+CGG | - | chr6_1:31742024-31742043 | Msa0882430:intron | 30.0% | |
! | ATTAAATGATGGAATACCTC+CGG | + | chr6_1:31742133-31742152 | None:intergenic | 30.0% |
TTTGTTACCTTCTTACTATC+AGG | - | chr6_1:31742194-31742213 | Msa0882430:intron | 30.0% | |
!!! | TCTCTTTTGCCATTTTACTT+TGG | - | chr6_1:31742218-31742237 | Msa0882430:intron | 30.0% |
ACCATACTATATTCTCCTTT+CGG | - | chr6_1:31742515-31742534 | Msa0882430:intron | 30.0% | |
! | ATTCCAGATTTTTAACCGAA+AGG | + | chr6_1:31742533-31742552 | None:intergenic | 30.0% |
! | TTCGGTTAAAAATCTGGAAT+AGG | - | chr6_1:31742533-31742552 | Msa0882430:intron | 30.0% |
AGGTTAGAGAGAATTATACA+AGG | - | chr6_1:31742660-31742679 | Msa0882430:intron | 30.0% | |
! | GAAATATCTGTACTCTTTTG+TGG | - | chr6_1:31742698-31742717 | Msa0882430:intron | 30.0% |
!! | ATAACCATTTTGGAGATGAT+TGG | + | chr6_1:31742768-31742787 | None:intergenic | 30.0% |
AACAGTTTCTACATATGGTT+AGG | + | chr6_1:31742838-31742857 | None:intergenic | 30.0% | |
CTTAGGAAGGAAAATGAATA+TGG | - | chr6_1:31742899-31742918 | Msa0882430:intron | 30.0% | |
AATCTCAAACATGGAGATAT+GGG | + | chr6_1:31743044-31743063 | None:intergenic | 30.0% | |
TAATCTCAAACATGGAGATA+TGG | + | chr6_1:31743045-31743064 | None:intergenic | 30.0% | |
GCATCTTTCCTATAGATAAA+AGG | - | chr6_1:31743155-31743174 | Msa0882430:intron | 30.0% | |
! | ATCTATGTTGTCACTTGTAT+AGG | - | chr6_1:31743190-31743209 | Msa0882430:intron | 30.0% |
ATGTGATCATTTAGGCAATT+GGG | - | chr6_1:31743214-31743233 | Msa0882430:intron | 30.0% | |
TGTATTGTATTATAGGTCCT+AGG | - | chr6_1:31743306-31743325 | Msa0882430:intron | 30.0% | |
GAGGTAAGAAATATGTTGTA+TGG | + | chr6_1:31743334-31743353 | None:intergenic | 30.0% | |
GAAATTGAGCAAAAGAATCA+AGG | + | chr6_1:31743404-31743423 | None:intergenic | 30.0% | |
AATCACTCCTCTCTATTTAT+TGG | + | chr6_1:31743557-31743576 | None:intergenic | 30.0% | |
AAACAATAGTAGCACTTCAA+GGG | + | chr6_1:31743643-31743662 | None:intergenic | 30.0% | |
!! | TTCAGTATTGATATACCACT+TGG | - | chr6_1:31743690-31743709 | Msa0882430:intron | 30.0% |
! | CCATAGATTTTAAATAGTGG+GGG | + | chr6_1:31744072-31744091 | None:intergenic | 30.0% |
GACAATGCATAATATATGCA+AGG | - | chr6_1:31744126-31744145 | Msa0882430:intron | 30.0% | |
!!! | TTATTTTTTATGTGGTGTCC+GGG | + | chr6_1:31744166-31744185 | None:intergenic | 30.0% |
ACTTCAGCTGTATAAAACTA+AGG | + | chr6_1:31744225-31744244 | None:intergenic | 30.0% | |
!! | GCTTTTTGTTTCACCTTTAT+TGG | - | chr6_1:31744300-31744319 | Msa0882430:intron | 30.0% |
ATCTATCATACCTAGCTATT+AGG | - | chr6_1:31744368-31744387 | Msa0882430:intron | 30.0% | |
TTCAGATTATCCTAATAGCT+AGG | + | chr6_1:31744381-31744400 | None:intergenic | 30.0% | |
AAAGTCTTGGATTTACTTTC+AGG | - | chr6_1:31744417-31744436 | Msa0882430:intron | 30.0% | |
!! | ATATTATTTGTTGTGCAGCT+GGG | + | chr6_1:31744504-31744523 | None:intergenic | 30.0% |
! | TTCGCCAAGAATAACTTTTA+TGG | + | chr6_1:31744530-31744549 | None:intergenic | 30.0% |
! | TCAACAAGGAGCATAATAAA+TGG | + | chr6_1:31744886-31744905 | None:intergenic | 30.0% |
TTTATTATGCTCCTTGTTGA+TGG | - | chr6_1:31744886-31744905 | Msa0882430:intron | 30.0% | |
CATTGACAAATAATTACGCA+AGG | + | chr6_1:31745159-31745178 | None:intergenic | 30.0% | |
CTTGCGTAATTATTTGTCAA+TGG | - | chr6_1:31745157-31745176 | Msa0882430:intron | 30.0% | |
!!! | GGACAATTTTTTTCCTAAAG+GGG | + | chr6_1:31745434-31745453 | None:intergenic | 30.0% |
!!! | GGGACAATTTTTTTCCTAAA+GGG | + | chr6_1:31745435-31745454 | None:intergenic | 30.0% |
!!! | AGGGACAATTTTTTTCCTAA+AGG | + | chr6_1:31745436-31745455 | None:intergenic | 30.0% |
AGTTACCACATAAATATTCG+TGG | + | chr6_1:31745778-31745797 | None:intergenic | 30.0% | |
ATAGAGCTGTAGTTATTGTA+AGG | - | chr6_1:31745972-31745991 | Msa0882430:CDS | 30.0% | |
TATACACATCATCTAATGAC+GGG | + | chr6_1:31746124-31746143 | None:intergenic | 30.0% | |
CTATACACATCATCTAATGA+CGG | + | chr6_1:31746125-31746144 | None:intergenic | 30.0% | |
! | GAAAATGTATGGGTTGTGTT+TGG | + | chr6_1:31735642-31735661 | None:intergenic | 35.0% |
CTTTCTCTCTCTAGATTGAA+GGG | + | chr6_1:31735714-31735733 | None:intergenic | 35.0% | |
CTCACAACCTATTTCAGTTA+CGG | - | chr6_1:31735860-31735879 | Msa0882430:three_prime_UTR | 35.0% | |
TCTTCCGAAAAATCTTTGAC+TGG | - | chr6_1:31735915-31735934 | Msa0882430:exon | 35.0% | |
! | TGCACCAGTCAAAGATTTTT+CGG | + | chr6_1:31735922-31735941 | None:intergenic | 35.0% |
TGAAGGAACCTGAAGATTAT+TGG | + | chr6_1:31735948-31735967 | None:intergenic | 35.0% | |
!! | TGAATAAGCGTGTTTTTGCA+GGG | - | chr6_1:31736183-31736202 | Msa0882430:intron | 35.0% |
TCTTCAAGTCCTAAACAGAT+CGG | + | chr6_1:31736216-31736235 | None:intergenic | 35.0% | |
AAATGACAAGAGAGTGAGTT+GGG | - | chr6_1:31736390-31736409 | Msa0882430:intron | 35.0% | |
GTTTGGAAACACGTTATTTG+TGG | - | chr6_1:31736811-31736830 | Msa0882430:CDS | 35.0% | |
AATTGTTACACGATGGAACT+AGG | - | chr6_1:31736907-31736926 | Msa0882430:intron | 35.0% | |
GATCAGAGTTTATAAAGAGG+AGG | - | chr6_1:31737211-31737230 | Msa0882430:intron | 35.0% | |
CTAACTCATCCTTACAAAAC+TGG | + | chr6_1:31737255-31737274 | None:intergenic | 35.0% | |
!! | CAGTTTTGTAAGGATGAGTT+AGG | - | chr6_1:31737253-31737272 | Msa0882430:intron | 35.0% |
GCCAATCCAAATGTGTATAA+AGG | - | chr6_1:31737649-31737668 | Msa0882430:intron | 35.0% | |
!! | TTTTGATTGGGAGAAGATTG+TGG | - | chr6_1:31737756-31737775 | Msa0882430:intron | 35.0% |
AGGAGACAAAAATCCTATCT+TGG | - | chr6_1:31737779-31737798 | Msa0882430:intron | 35.0% | |
TTCCATAACACCAAATCAAG+AGG | - | chr6_1:31737806-31737825 | Msa0882430:intron | 35.0% | |
!! | ATCCTCTTGATTTGGTGTTA+TGG | + | chr6_1:31737811-31737830 | None:intergenic | 35.0% |
TCGTTTATGCAATGAATCAG+TGG | - | chr6_1:31737831-31737850 | Msa0882430:intron | 35.0% | |
TTAAGCGATGAGTAGTTATC+CGG | - | chr6_1:31737888-31737907 | Msa0882430:intron | 35.0% | |
! | TGATACGCAGCATCATATTT+TGG | + | chr6_1:31737992-31738011 | None:intergenic | 35.0% |
! | ACTGCATAATTTGCAGGTTT+CGG | + | chr6_1:31738337-31738356 | None:intergenic | 35.0% |
TGATATGCAATATTATGGGG+CGG | - | chr6_1:31738363-31738382 | Msa0882430:intron | 35.0% | |
TTCTGCTTTATCCCATCATT+TGG | - | chr6_1:31738513-31738532 | Msa0882430:intron | 35.0% | |
TCTGCTTTATCCCATCATTT+GGG | - | chr6_1:31738514-31738533 | Msa0882430:intron | 35.0% | |
! | GAAAAAGGAGTACATTTCCT+TGG | - | chr6_1:31738642-31738661 | Msa0882430:intron | 35.0% |
TCTATGATGAATTCAGGATC+TGG | - | chr6_1:31738906-31738925 | Msa0882430:intron | 35.0% | |
AGTGCAATGTTATTCCTAAC+TGG | + | chr6_1:31739056-31739075 | None:intergenic | 35.0% | |
ACAACAATCCCCTTTATTCA+AGG | - | chr6_1:31739089-31739108 | Msa0882430:intron | 35.0% | |
AACCACATCCTTGAATAAAG+GGG | + | chr6_1:31739100-31739119 | None:intergenic | 35.0% | |
AGTAAGGTATAGACTTTGGA+GGG | + | chr6_1:31739489-31739508 | None:intergenic | 35.0% | |
TTGGAGTAAGGTATAGACTT+TGG | + | chr6_1:31739493-31739512 | None:intergenic | 35.0% | |
CAGATAAGGTTGAATCATTC+GGG | - | chr6_1:31739698-31739717 | Msa0882430:intron | 35.0% | |
ACTCTCCAAAAATCCTTAAG+AGG | + | chr6_1:31739812-31739831 | None:intergenic | 35.0% | |
!! | ATTTTTGGAGAGTTAACACC+AGG | - | chr6_1:31739819-31739838 | Msa0882430:intron | 35.0% |
!! | TTTTTGGAGAGTTAACACCA+GGG | - | chr6_1:31739820-31739839 | Msa0882430:intron | 35.0% |
!!! | AATTTTTGGCAGGACTGTTT+TGG | - | chr6_1:31739902-31739921 | Msa0882430:intron | 35.0% |
!!! | ATTTTTGGCAGGACTGTTTT+GGG | - | chr6_1:31739903-31739922 | Msa0882430:intron | 35.0% |
!!! | ATTTTTTTGTGTTAGGGGAG+TGG | - | chr6_1:31740051-31740070 | Msa0882430:intron | 35.0% |
!!! | TTTTTTTGTGTTAGGGGAGT+GGG | - | chr6_1:31740052-31740071 | Msa0882430:intron | 35.0% |
!! | AAGACATCGACTTACTTTAC+TGG | + | chr6_1:31740198-31740217 | None:intergenic | 35.0% |
AGTAAGTCGATGTCTTAACT+TGG | - | chr6_1:31740202-31740221 | Msa0882430:intron | 35.0% | |
GTAAGTCGATGTCTTAACTT+GGG | - | chr6_1:31740203-31740222 | Msa0882430:intron | 35.0% | |
!!! | TAACTATCTTGGTTTTGCTG+CGG | - | chr6_1:31740232-31740251 | Msa0882430:intron | 35.0% |
TTCAATGTATCAATCACTCG+AGG | + | chr6_1:31740275-31740294 | None:intergenic | 35.0% | |
AGCATCTAATCTATCAAGAG+GGG | + | chr6_1:31740588-31740607 | None:intergenic | 35.0% | |
! | CACCATTAACAATTGAGTTG+TGG | + | chr6_1:31740678-31740697 | None:intergenic | 35.0% |
AATTGGTATCACAATACGTG+GGG | - | chr6_1:31740941-31740960 | Msa0882430:intron | 35.0% | |
CTGAAAAAACGCAATCCAAT+AGG | + | chr6_1:31741277-31741296 | None:intergenic | 35.0% | |
TTACGAGAACAAATTGCTGA+GGG | - | chr6_1:31741397-31741416 | Msa0882430:intron | 35.0% | |
! | GAAGATAATGGTTATTGTGG+AGG | - | chr6_1:31741447-31741466 | Msa0882430:intron | 35.0% |
! | AGATAATGGTTATTGTGGAG+GGG | - | chr6_1:31741449-31741468 | Msa0882430:intron | 35.0% |
GTGAAAAGTCTATACAAGTG+AGG | - | chr6_1:31741648-31741667 | Msa0882430:intron | 35.0% | |
AAAAGTCTAGTTGAGTGAAC+AGG | - | chr6_1:31741885-31741904 | Msa0882430:CDS | 35.0% | |
TTGAGTGAACAGGAATTTGA+GGG | - | chr6_1:31741895-31741914 | Msa0882430:CDS | 35.0% | |
! | GGAAAGGGTGTATTAAATGA+AGG | + | chr6_1:31741940-31741959 | None:intergenic | 35.0% |
TAGTAAGAAGGTAAGGGAAA+GGG | + | chr6_1:31741955-31741974 | None:intergenic | 35.0% | |
ATAGTAAGAAGGTAAGGGAA+AGG | + | chr6_1:31741956-31741975 | None:intergenic | 35.0% | |
ACCTGATAGTAAGAAGGTAA+GGG | + | chr6_1:31741961-31741980 | None:intergenic | 35.0% | |
TACCTGATAGTAAGAAGGTA+AGG | + | chr6_1:31741962-31741981 | None:intergenic | 35.0% | |
AAGAGAACCTGATAGTAAGA+AGG | + | chr6_1:31742204-31742223 | None:intergenic | 35.0% | |
ACCAAATCATTTGGATCATG+TGG | - | chr6_1:31742389-31742408 | Msa0882430:intron | 35.0% | |
TCCACATGATCCAAATGATT+TGG | + | chr6_1:31742393-31742412 | None:intergenic | 35.0% | |
AAATCATTTGGATCATGTGG+AGG | - | chr6_1:31742392-31742411 | Msa0882430:intron | 35.0% | |
AGGTTATATTGCAGGATCTA+AGG | - | chr6_1:31742412-31742431 | Msa0882430:intron | 35.0% | |
ACCGAAAGGAGAATATAGTA+TGG | + | chr6_1:31742519-31742538 | None:intergenic | 35.0% | |
TCTCCTTTCGGTTAAAAATC+TGG | - | chr6_1:31742527-31742546 | Msa0882430:intron | 35.0% | |
TGTATGAAGAGAAAAGTGAC+TGG | - | chr6_1:31742571-31742590 | Msa0882430:intron | 35.0% | |
! | GTTAGTTTCTTATAGGTAGC+TGG | - | chr6_1:31742625-31742644 | Msa0882430:intron | 35.0% |
! | TATCTGTACTCTTTTGTGGA+TGG | - | chr6_1:31742702-31742721 | Msa0882430:intron | 35.0% |
! | ATCTGTACTCTTTTGTGGAT+GGG | - | chr6_1:31742703-31742722 | Msa0882430:intron | 35.0% |
GCAGGGCTACAAAAAATTAA+GGG | + | chr6_1:31742735-31742754 | None:intergenic | 35.0% | |
TGCAGGGCTACAAAAAATTA+AGG | + | chr6_1:31742736-31742755 | None:intergenic | 35.0% | |
!! | ATTTTGGAGATGATTGGCAA+GGG | + | chr6_1:31742762-31742781 | None:intergenic | 35.0% |
CGATCAACAGTTTCTACATA+TGG | + | chr6_1:31742843-31742862 | None:intergenic | 35.0% | |
TAGAAACTGTTGATCGTAGA+AGG | - | chr6_1:31742847-31742866 | Msa0882430:intron | 35.0% | |
AGAAACTGTTGATCGTAGAA+GGG | - | chr6_1:31742848-31742867 | Msa0882430:intron | 35.0% | |
AAGGAAAATGAATATGGCAG+AGG | - | chr6_1:31742905-31742924 | Msa0882430:intron | 35.0% | |
AGGAAAATGAATATGGCAGA+GGG | - | chr6_1:31742906-31742925 | Msa0882430:intron | 35.0% | |
AAGAATACATAGACCTGAGT+TGG | - | chr6_1:31742929-31742948 | Msa0882430:intron | 35.0% | |
AGAATACATAGACCTGAGTT+GGG | - | chr6_1:31742930-31742949 | Msa0882430:intron | 35.0% | |
ACAGGTCATAATCTCAAACA+TGG | + | chr6_1:31743053-31743072 | None:intergenic | 35.0% | |
GAGATTATGACCTGTGTAAT+CGG | - | chr6_1:31743058-31743077 | Msa0882430:intron | 35.0% | |
GTATAGGCATGTGATCATTT+AGG | - | chr6_1:31743206-31743225 | Msa0882430:intron | 35.0% | |
CATGTGATCATTTAGGCAAT+TGG | - | chr6_1:31743213-31743232 | Msa0882430:intron | 35.0% | |
AAATATGTTGTATGGGTCCT+AGG | + | chr6_1:31743326-31743345 | None:intergenic | 35.0% | |
! | AGAATCAAGGTATTCCTTGA+GGG | + | chr6_1:31743391-31743410 | None:intergenic | 35.0% |
! | AAGAATCAAGGTATTCCTTG+AGG | + | chr6_1:31743392-31743411 | None:intergenic | 35.0% |
GAAACAGAAGAAAACTGTGA+AGG | + | chr6_1:31743429-31743448 | None:intergenic | 35.0% | |
!! | CACAGTTTTCTTCTGTTTCT+TGG | - | chr6_1:31743430-31743449 | Msa0882430:intron | 35.0% |
! | TCTTGTCATTTGAGAGGATT+AGG | - | chr6_1:31743590-31743609 | Msa0882430:intron | 35.0% |
! | CTTGTCATTTGAGAGGATTA+GGG | - | chr6_1:31743591-31743610 | Msa0882430:intron | 35.0% |
CAAACAATAGTAGCACTTCA+AGG | + | chr6_1:31743644-31743663 | None:intergenic | 35.0% | |
! | CCCCCACTATTTAAAATCTA+TGG | - | chr6_1:31744069-31744088 | Msa0882430:intron | 35.0% |
TGCATAATATATGCAAGGTC+TGG | - | chr6_1:31744131-31744150 | Msa0882430:intron | 35.0% | |
GCATAATATATGCAAGGTCT+GGG | - | chr6_1:31744132-31744151 | Msa0882430:intron | 35.0% | |
CATAATATATGCAAGGTCTG+GGG | - | chr6_1:31744133-31744152 | Msa0882430:intron | 35.0% | |
!!! | TATTTTTTATGTGGTGTCCG+GGG | + | chr6_1:31744165-31744184 | None:intergenic | 35.0% |
! | TTTTTATGGTGAGTGCAAAC+TGG | + | chr6_1:31744348-31744367 | None:intergenic | 35.0% |
AAGTTGCATAAAGATGTGCA+GGG | + | chr6_1:31744471-31744490 | None:intergenic | 35.0% | |
!! | TATTATTTGTTGTGCAGCTG+GGG | + | chr6_1:31744503-31744522 | None:intergenic | 35.0% |
!! | GATATTATTTGTTGTGCAGC+TGG | + | chr6_1:31744505-31744524 | None:intergenic | 35.0% |
AAAGTTATTCTTGGCGAAGA+TGG | - | chr6_1:31744532-31744551 | Msa0882430:intron | 35.0% | |
GCATTGCATAAGTTGTTGAT+TGG | - | chr6_1:31744593-31744612 | Msa0882430:intron | 35.0% | |
! | AAGATGGGATTTGAAGTTCT+TGG | - | chr6_1:31744755-31744774 | Msa0882430:intron | 35.0% |
! | AGATGGGATTTGAAGTTCTT+GGG | - | chr6_1:31744756-31744775 | Msa0882430:intron | 35.0% |
TAAAGCATGATTGGCATTAC+AGG | + | chr6_1:31744794-31744813 | None:intergenic | 35.0% | |
CATATCAGCTTCTCATTCAA+GGG | - | chr6_1:31745025-31745044 | Msa0882430:intron | 35.0% | |
ATTCAAAATACACACCTGCA+AGG | + | chr6_1:31745066-31745085 | None:intergenic | 35.0% | |
! | ATATTTTCTATTCTACCCCC+TGG | - | chr6_1:31745383-31745402 | Msa0882430:intron | 35.0% |
TTAGGTAGTACAATCTACCA+GGG | + | chr6_1:31745403-31745422 | None:intergenic | 35.0% | |
ATTAGGTAGTACAATCTACC+AGG | + | chr6_1:31745404-31745423 | None:intergenic | 35.0% | |
CCTAAAGGGGACTTATAATT+AGG | + | chr6_1:31745421-31745440 | None:intergenic | 35.0% | |
CCTAATTATAAGTCCCCTTT+AGG | - | chr6_1:31745418-31745437 | Msa0882430:intron | 35.0% | |
TTGGACACTTCTATACACAA+AGG | - | chr6_1:31745542-31745561 | Msa0882430:intron | 35.0% | |
TCACTGTTTATAAGCTCCTT+TGG | + | chr6_1:31745657-31745676 | None:intergenic | 35.0% | |
AAGGAGCTTATAAACAGTGA+TGG | - | chr6_1:31745657-31745676 | Msa0882430:intron | 35.0% | |
AAGACATCCTTCAAGGATAT+TGG | + | chr6_1:31745740-31745759 | None:intergenic | 35.0% | |
ACTCAAAAAGACATCCTTCA+AGG | + | chr6_1:31745747-31745766 | None:intergenic | 35.0% | |
!! | GTAAGGCATTTTTGAATCCA+TGG | - | chr6_1:31745989-31746008 | Msa0882430:CDS | 35.0% |
! | CAGTTAGTTTGAAATCACCA+TGG | + | chr6_1:31746009-31746028 | None:intergenic | 35.0% |
CATGGTGATTTCAAACTAAC+TGG | - | chr6_1:31746007-31746026 | Msa0882430:exon | 35.0% | |
ATACACATCATCTAATGACG+GGG | + | chr6_1:31746123-31746142 | None:intergenic | 35.0% | |
TGGCTGGAGATGATTCAAAT+GGG | + | chr6_1:31735622-31735641 | None:intergenic | 40.0% | |
TTGGCTGGAGATGATTCAAA+TGG | + | chr6_1:31735623-31735642 | None:intergenic | 40.0% | |
TCTCTCTAGATTGAAGGGAA+GGG | + | chr6_1:31735709-31735728 | None:intergenic | 40.0% | |
GCTTTCTCTCTCTAGATTGA+AGG | + | chr6_1:31735715-31735734 | None:intergenic | 40.0% | |
GAGCAAACCGTAACTGAAAT+AGG | + | chr6_1:31735870-31735889 | None:intergenic | 40.0% | |
GTGCAGTTCCAATAATCTTC+AGG | - | chr6_1:31735937-31735956 | Msa0882430:CDS | 40.0% | |
!! | CTGAATAAGCGTGTTTTTGC+AGG | - | chr6_1:31736182-31736201 | Msa0882430:intron | 40.0% |
GAAATGACAAGAGAGTGAGT+TGG | - | chr6_1:31736389-31736408 | Msa0882430:intron | 40.0% | |
AATGACAAGAGAGTGAGTTG+GGG | - | chr6_1:31736391-31736410 | Msa0882430:intron | 40.0% | |
! | GACCTGTGGATTATGTAGTA+AGG | - | chr6_1:31736476-31736495 | Msa0882430:intron | 40.0% |
CTCCTTACTACATAATCCAC+AGG | + | chr6_1:31736481-31736500 | None:intergenic | 40.0% | |
!! | GTAGTAAGGAGAGTATCAGA+TGG | - | chr6_1:31736490-31736509 | Msa0882430:intron | 40.0% |
!! | TAAGGAGAGTATCAGATGGA+GGG | - | chr6_1:31736494-31736513 | Msa0882430:intron | 40.0% |
GAAGTCATATCCCACTAAGT+GGG | + | chr6_1:31736632-31736651 | None:intergenic | 40.0% | |
!! | CCTTACAAAACTGGCTTGTA+AGG | + | chr6_1:31737246-31737265 | None:intergenic | 40.0% |
!! | CCTTACAAGCCAGTTTTGTA+AGG | - | chr6_1:31737243-31737262 | Msa0882430:intron | 40.0% |
ACACATCAACTTCTGCAATG+TGG | + | chr6_1:31737933-31737952 | None:intergenic | 40.0% | |
!! | GAAGTTGATGTGTTTGAACC+TGG | - | chr6_1:31737940-31737959 | Msa0882430:intron | 40.0% |
ATTTACATACGCAGCTTCTG+TGG | - | chr6_1:31738236-31738255 | Msa0882430:intron | 40.0% | |
TTTACATACGCAGCTTCTGT+GGG | - | chr6_1:31738237-31738256 | Msa0882430:intron | 40.0% | |
AAACAAATCGAAGCTACGAC+TGG | + | chr6_1:31738278-31738297 | None:intergenic | 40.0% | |
! | CCACATACTGCATAATTTGC+AGG | + | chr6_1:31738343-31738362 | None:intergenic | 40.0% |
CCTGCAAATTATGCAGTATG+TGG | - | chr6_1:31738340-31738359 | Msa0882430:intron | 40.0% | |
!! | GTACATAGAAGTATCCTGAC+CGG | + | chr6_1:31738407-31738426 | None:intergenic | 40.0% |
!! | TGGCTATACGTTGCTAGTTT+TGG | - | chr6_1:31738432-31738451 | Msa0882430:intron | 40.0% |
AGAGCTGAAACCCAAATGAT+GGG | + | chr6_1:31738527-31738546 | None:intergenic | 40.0% | |
TAGAGCTGAAACCCAAATGA+TGG | + | chr6_1:31738528-31738547 | None:intergenic | 40.0% | |
GATTGCAACTCAAACCAGTT+AGG | - | chr6_1:31739039-31739058 | Msa0882430:intron | 40.0% | |
ATCCCCTTTATTCAAGGATG+TGG | - | chr6_1:31739095-31739114 | Msa0882430:intron | 40.0% | |
GGTTAAACCACCATCTAAGA+TGG | - | chr6_1:31739116-31739135 | Msa0882430:intron | 40.0% | |
TGGTTTACCATCTTAGATGG+TGG | + | chr6_1:31739126-31739145 | None:intergenic | 40.0% | |
GCAACGTTCTCATTCTACAA+AGG | - | chr6_1:31739243-31739262 | Msa0882430:intron | 40.0% | |
AACCTTGCATTAGAACTGCA+AGG | + | chr6_1:31739326-31739345 | None:intergenic | 40.0% | |
GAGTAAGGTATAGACTTTGG+AGG | + | chr6_1:31739490-31739509 | None:intergenic | 40.0% | |
AAATGAGGATCTATGGCTAG+TGG | + | chr6_1:31739581-31739600 | None:intergenic | 40.0% | |
GCGGTTAATAGCTTCAGATA+AGG | - | chr6_1:31739684-31739703 | Msa0882430:intron | 40.0% | |
ATAAGGTTGAATCATTCGGG+CGG | - | chr6_1:31739701-31739720 | Msa0882430:intron | 40.0% | |
GTTAGACCTCTTTCCTCTTA+AGG | - | chr6_1:31739796-31739815 | Msa0882430:intron | 40.0% | |
ACTACATCAAACCAAGCATC+AGG | + | chr6_1:31739947-31739966 | None:intergenic | 40.0% | |
!!! | TTTTTTGTGTTAGGGGAGTG+GGG | - | chr6_1:31740053-31740072 | Msa0882430:intron | 40.0% |
CCTATTGGAGAATCCACATT+TGG | + | chr6_1:31740417-31740436 | None:intergenic | 40.0% | |
CCAAATGTGGATTCTCCAAT+AGG | - | chr6_1:31740414-31740433 | Msa0882430:CDS | 40.0% | |
GACAGCACTTCACAATGAAT+TGG | - | chr6_1:31740440-31740459 | Msa0882430:CDS | 40.0% | |
AGCACTTCACAATGAATTGG+AGG | - | chr6_1:31740443-31740462 | Msa0882430:CDS | 40.0% | |
TGTTAAAAAGCCAGCTGCTT+TGG | - | chr6_1:31740482-31740501 | Msa0882430:intron | 40.0% | |
ATTCCAAAAACCAAAGCAGC+TGG | + | chr6_1:31740495-31740514 | None:intergenic | 40.0% | |
!!! | AGCTGCTTTGGTTTTTGGAA+TGG | - | chr6_1:31740494-31740513 | Msa0882430:intron | 40.0% |
!!! | GCTGCTTTGGTTTTTGGAAT+GGG | - | chr6_1:31740495-31740514 | Msa0882430:intron | 40.0% |
GACAAACTCTGCTATTCTTC+CGG | - | chr6_1:31740524-31740543 | Msa0882430:intron | 40.0% | |
ACTCAATTGTTAATGGTGCG+CGG | - | chr6_1:31740680-31740699 | Msa0882430:intron | 40.0% | |
CTTATTCTGGTAACCAGCAA+AGG | + | chr6_1:31740750-31740769 | None:intergenic | 40.0% | |
ATTGGTATCACAATACGTGG+GGG | - | chr6_1:31740942-31740961 | Msa0882430:intron | 40.0% | |
! | AGATTGGTTGTAGATGATGG+TGG | - | chr6_1:31741070-31741089 | Msa0882430:intron | 40.0% |
TGATGTACTTTGCTGCCTAT+TGG | - | chr6_1:31741259-31741278 | Msa0882430:intron | 40.0% | |
AACACTTCTTCTAGATGTGC+TGG | + | chr6_1:31741379-31741398 | None:intergenic | 40.0% | |
GTTACGAGAACAAATTGCTG+AGG | - | chr6_1:31741396-31741415 | Msa0882430:intron | 40.0% | |
TTGCATATAGCTATGACCTC+TGG | + | chr6_1:31741508-31741527 | None:intergenic | 40.0% | |
! | ATGCGGATACACAATTTTCC+TGG | + | chr6_1:31741731-31741750 | None:intergenic | 40.0% |
GTTGAGTGAACAGGAATTTG+AGG | - | chr6_1:31741894-31741913 | Msa0882430:CDS | 40.0% | |
AAGGAATACCTCCAGTATTG+TGG | + | chr6_1:31741921-31741940 | None:intergenic | 40.0% | |
TCCCTTACCTTCTTACTATC+AGG | - | chr6_1:31741957-31741976 | Msa0882430:intron | 40.0% | |
TTAAGTGAACGGGAATGAGA+GGG | - | chr6_1:31742099-31742118 | Msa0882430:intron | 40.0% | |
! | CGAAACAGGGCATTAAATGA+TGG | + | chr6_1:31742144-31742163 | None:intergenic | 40.0% |
CTTCTGAGCAGACATCTAAT+TGG | - | chr6_1:31742164-31742183 | Msa0882430:intron | 40.0% | |
GGGACATTCACCAAATCATT+TGG | - | chr6_1:31742380-31742399 | Msa0882430:intron | 40.0% | |
TCATGTGGAGGTTATATTGC+AGG | - | chr6_1:31742404-31742423 | Msa0882430:intron | 40.0% | |
GAAAAGTGACTGGACCTATA+TGG | - | chr6_1:31742581-31742600 | Msa0882430:intron | 40.0% | |
TGACTGGACCTATATGGTAT+GGG | - | chr6_1:31742587-31742606 | Msa0882430:intron | 40.0% | |
AATTCCCTCCCATACCATAT+AGG | + | chr6_1:31742598-31742617 | None:intergenic | 40.0% | |
GTAGCTGGACTGAAACATAT+AGG | - | chr6_1:31742640-31742659 | Msa0882430:intron | 40.0% | |
!! | CATTTTGGAGATGATTGGCA+AGG | + | chr6_1:31742763-31742782 | None:intergenic | 40.0% |
CTTGCCAATCATCTCCAAAA+TGG | - | chr6_1:31742761-31742780 | Msa0882430:intron | 40.0% | |
! | ATAGACCTGAGTTGGGAATT+GGG | - | chr6_1:31742937-31742956 | Msa0882430:intron | 40.0% |
TATGACCTGTGTAATCGGTA+AGG | - | chr6_1:31743063-31743082 | Msa0882430:intron | 40.0% | |
ATGACCTGTGTAATCGGTAA+GGG | - | chr6_1:31743064-31743083 | Msa0882430:intron | 40.0% | |
AACAGAAAATAGCCTCACTG+AGG | + | chr6_1:31743090-31743109 | None:intergenic | 40.0% | |
GTGACAACATAGATCACTCT+CGG | + | chr6_1:31743184-31743203 | None:intergenic | 40.0% | |
TCTAGTCTCTCGAATACTCT+TGG | - | chr6_1:31743241-31743260 | Msa0882430:intron | 40.0% | |
GGGTATGTTGAGAGATAGTT+AGG | - | chr6_1:31743515-31743534 | Msa0882430:intron | 40.0% | |
GAGAGATAGTTAGGCCAATA+AGG | - | chr6_1:31743524-31743543 | Msa0882430:intron | 40.0% | |
TTATTGGCAGCATGCCTTAT+TGG | + | chr6_1:31743541-31743560 | None:intergenic | 40.0% | |
CATGCTGCCAATAAATAGAG+AGG | - | chr6_1:31743547-31743566 | Msa0882430:intron | 40.0% | |
ATAGAGAGGAGTGATTAGAG+AGG | - | chr6_1:31743561-31743580 | Msa0882430:intron | 40.0% | |
TAGAGAGGAGTGATTAGAGA+GGG | - | chr6_1:31743562-31743581 | Msa0882430:intron | 40.0% | |
! | GCATCATCTTGTCATTTGAG+AGG | - | chr6_1:31743584-31743603 | Msa0882430:intron | 40.0% |
CATGATGTGATAGAACCAAG+TGG | + | chr6_1:31743708-31743727 | None:intergenic | 40.0% | |
! | TACACCACGAGCTTTATAGA+AGG | + | chr6_1:31743792-31743811 | None:intergenic | 40.0% |
ATGCTGAATTAGTGTGCTCT+TGG | - | chr6_1:31744262-31744281 | Msa0882430:intron | 40.0% | |
GAAGTTGCATAAAGATGTGC+AGG | + | chr6_1:31744472-31744491 | None:intergenic | 40.0% | |
!! | ATTATTTGTTGTGCAGCTGG+GGG | + | chr6_1:31744502-31744521 | None:intergenic | 40.0% |
TCGGATCTTTGCAAGTTTCT+GGG | + | chr6_1:31744702-31744721 | None:intergenic | 40.0% | |
AGGTCAGAATTGCAGAAGAT+GGG | - | chr6_1:31744740-31744759 | Msa0882430:intron | 40.0% | |
! | GATGGGATTTGAAGTTCTTG+GGG | - | chr6_1:31744757-31744776 | Msa0882430:intron | 40.0% |
TTAACTGAGATCCGTGATGT+AGG | + | chr6_1:31744912-31744931 | None:intergenic | 40.0% | |
GCATATCAGCTTCTCATTCA+AGG | - | chr6_1:31745024-31745043 | Msa0882430:intron | 40.0% | |
TAGGTAGTACAATCTACCAG+GGG | + | chr6_1:31745402-31745421 | None:intergenic | 40.0% | |
GTTTGTGCCAATATCCTTGA+AGG | - | chr6_1:31745730-31745749 | Msa0882430:intron | 40.0% | |
CGCTTCCACGAATATTTATG+TGG | - | chr6_1:31745770-31745789 | Msa0882430:intron | 40.0% | |
TGTTTGTGCTTTCCTTTCGT+AGG | - | chr6_1:31745803-31745822 | Msa0882430:intron | 40.0% | |
CACTGCTAATAACCTACGAA+AGG | + | chr6_1:31745818-31745837 | None:intergenic | 40.0% | |
TCGTAGGTTATTAGCAGTGT+AGG | - | chr6_1:31745819-31745838 | Msa0882430:intron | 40.0% | |
AGCAGTGTAGGTGATCTAAT+TGG | - | chr6_1:31745831-31745850 | Msa0882430:intron | 40.0% | |
!! | TCTTGTTGTTGTTGCTTCGT+TGG | + | chr6_1:31745879-31745898 | None:intergenic | 40.0% |
ACGAAGCAACAACAACAAGA+TGG | - | chr6_1:31745879-31745898 | Msa0882430:intron | 40.0% | |
! | ATGTATGGGTTGTGTTTGGC+TGG | + | chr6_1:31735638-31735657 | None:intergenic | 45.0% |
CTAGATTGAAGGGAAGGGAA+GGG | + | chr6_1:31735704-31735723 | None:intergenic | 45.0% | |
TCTAGATTGAAGGGAAGGGA+AGG | + | chr6_1:31735705-31735724 | None:intergenic | 45.0% | |
CTCTCTCTAGATTGAAGGGA+AGG | + | chr6_1:31735710-31735729 | None:intergenic | 45.0% | |
GTTGTGAGTGCAGTGAGATA+CGG | + | chr6_1:31735848-31735867 | None:intergenic | 45.0% | |
! | TACGGTTTGCTCTTCGCTTT+CGG | - | chr6_1:31735878-31735897 | Msa0882430:three_prime_UTR | 45.0% |
GATTGAACTGAATAAGCGCG+TGG | - | chr6_1:31736010-31736029 | Msa0882430:intron | 45.0% | |
! | GGTTATGCACCGATCTGTTT+AGG | - | chr6_1:31736204-31736223 | Msa0882430:intron | 45.0% |
GGATGTGCGGTAATACTAGA+CGG | - | chr6_1:31736356-31736375 | Msa0882430:intron | 45.0% | |
ACATGTAGAGAGAAGACCTG+TGG | - | chr6_1:31736462-31736481 | Msa0882430:intron | 45.0% | |
!! | GTAAGGAGAGTATCAGATGG+AGG | - | chr6_1:31736493-31736512 | Msa0882430:intron | 45.0% |
!! | AAGGAGAGTATCAGATGGAG+GGG | - | chr6_1:31736495-31736514 | Msa0882430:intron | 45.0% |
AGGGGAGTCAAATCACTAGA+GGG | - | chr6_1:31736513-31736532 | Msa0882430:intron | 45.0% | |
AGTCAAATCACTAGAGGGAG+AGG | - | chr6_1:31736518-31736537 | Msa0882430:intron | 45.0% | |
CGAAGTCATATCCCACTAAG+TGG | + | chr6_1:31736633-31736652 | None:intergenic | 45.0% | |
CTTAGTGGGATATGACTTCG+TGG | - | chr6_1:31736633-31736652 | Msa0882430:intron | 45.0% | |
TGATGGAACTAGGCTCTGTA+TGG | - | chr6_1:31736708-31736727 | Msa0882430:intron | 45.0% | |
! | TAGTCCCACATCGGTTAGAT+AGG | - | chr6_1:31737182-31737201 | Msa0882430:intron | 45.0% |
GCTTCCTATCTAACCGATGT+GGG | + | chr6_1:31737189-31737208 | None:intergenic | 45.0% | |
AGCTTCCTATCTAACCGATG+TGG | + | chr6_1:31737190-31737209 | None:intergenic | 45.0% | |
!! | CAAAACTGGCTTGTAAGGTG+AGG | + | chr6_1:31737241-31737260 | None:intergenic | 45.0% |
TGATTGGGAGAAGATTGTGG+AGG | - | chr6_1:31737759-31737778 | Msa0882430:intron | 45.0% | |
TGAGAACCCTTTGAGCTGTT+TGG | - | chr6_1:31737856-31737875 | Msa0882430:intron | 45.0% | |
GAGAACCCTTTGAGCTGTTT+GGG | - | chr6_1:31737857-31737876 | Msa0882430:intron | 45.0% | |
AGAACCCTTTGAGCTGTTTG+GGG | - | chr6_1:31737858-31737877 | Msa0882430:intron | 45.0% | |
CTATCCCCAAACAGCTCAAA+GGG | + | chr6_1:31737865-31737884 | None:intergenic | 45.0% | |
ACTATCCCCAAACAGCTCAA+AGG | + | chr6_1:31737866-31737885 | None:intergenic | 45.0% | |
GTTGATGTGTTTGAACCTGG+AGG | - | chr6_1:31737943-31737962 | Msa0882430:intron | 45.0% | |
TGCGTATCAGTATGTCTGCA+GGG | - | chr6_1:31738003-31738022 | Msa0882430:intron | 45.0% | |
CTGTGTGTGTTCTCTGTAGT+GGG | - | chr6_1:31738063-31738082 | Msa0882430:intron | 45.0% | |
CCATATTCTATGTTGGGGAG+AGG | + | chr6_1:31738139-31738158 | None:intergenic | 45.0% | |
CCTCTCCCCAACATAGAATA+TGG | - | chr6_1:31738136-31738155 | Msa0882430:intron | 45.0% | |
CTGCGTATGTAAATGTCCAG+AGG | + | chr6_1:31738230-31738249 | None:intergenic | 45.0% | |
CTTAAGATCCCCACACAACA+GGG | + | chr6_1:31738460-31738479 | None:intergenic | 45.0% | |
ACTTAAGATCCCCACACAAC+AGG | + | chr6_1:31738461-31738480 | None:intergenic | 45.0% | |
! | AGCCTTGCAGTTCTAATGCA+AGG | - | chr6_1:31739321-31739340 | Msa0882430:intron | 45.0% |
! | TAGACTTTGGAGGGATGCAT+TGG | + | chr6_1:31739480-31739499 | None:intergenic | 45.0% |
CCTATGACAAGCTTGGAGTA+AGG | + | chr6_1:31739505-31739524 | None:intergenic | 45.0% | |
CCTTACTCCAAGCTTGTCAT+AGG | - | chr6_1:31739502-31739521 | Msa0882430:CDS | 45.0% | |
CCAGTTACCTATGACAAGCT+TGG | + | chr6_1:31739512-31739531 | None:intergenic | 45.0% | |
CCAAGCTTGTCATAGGTAAC+TGG | - | chr6_1:31739509-31739528 | Msa0882430:CDS | 45.0% | |
!! | GCATCAGGAGCACTTGATAT+TGG | + | chr6_1:31739932-31739951 | None:intergenic | 45.0% |
TATCAAGTGCTCCTGATGCT+TGG | - | chr6_1:31739933-31739952 | Msa0882430:intron | 45.0% | |
!!! | AAGCCAGCTGCTTTGGTTTT+TGG | - | chr6_1:31740489-31740508 | Msa0882430:intron | 45.0% |
TGCTATTCTTCCGGTCTTGA+TGG | - | chr6_1:31740533-31740552 | Msa0882430:intron | 45.0% | |
GCTATTCTTCCGGTCTTGAT+GGG | - | chr6_1:31740534-31740553 | Msa0882430:intron | 45.0% | |
CTATTCTTCCGGTCTTGATG+GGG | - | chr6_1:31740535-31740554 | Msa0882430:intron | 45.0% | |
!! | TGGGGAAGGTTGGTAACATT+TGG | - | chr6_1:31740553-31740572 | Msa0882430:intron | 45.0% |
CTCAATTGTTAATGGTGCGC+GGG | - | chr6_1:31740681-31740700 | Msa0882430:intron | 45.0% | |
TCAATTGTTAATGGTGCGCG+GGG | - | chr6_1:31740682-31740701 | Msa0882430:intron | 45.0% | |
TCTACGTGTCAAGTGCTACA+TGG | + | chr6_1:31740897-31740916 | None:intergenic | 45.0% | |
CGTGGGGGAAAGAAATTTGA+AGG | - | chr6_1:31740957-31740976 | Msa0882430:intron | 45.0% | |
TAGGCCCTGGAAGAAGATAA+TGG | - | chr6_1:31741435-31741454 | Msa0882430:intron | 45.0% | |
AGAGCTTTGCAAACTTCCAG+AGG | - | chr6_1:31741489-31741508 | Msa0882430:intron | 45.0% | |
CCTGGACTCAAACCATTTAC+AGG | + | chr6_1:31741713-31741732 | None:intergenic | 45.0% | |
CCTGTAAATGGTTTGAGTCC+AGG | - | chr6_1:31741710-31741729 | Msa0882430:intron | 45.0% | |
GAATTTGAGGGCCACAATAC+TGG | - | chr6_1:31741907-31741926 | Msa0882430:CDS | 45.0% | |
GTTAAGTGAACGGGAATGAG+AGG | - | chr6_1:31742098-31742117 | Msa0882430:intron | 45.0% | |
ATGGAATACCTCCGGTATTG+TGG | + | chr6_1:31742125-31742144 | None:intergenic | 45.0% | |
TTGGATGAAGCACACAGCAT+TGG | - | chr6_1:31742284-31742303 | Msa0882430:intron | 45.0% | |
GTGACTGGACCTATATGGTA+TGG | - | chr6_1:31742586-31742605 | Msa0882430:intron | 45.0% | |
TGGACCTATATGGTATGGGA+GGG | - | chr6_1:31742591-31742610 | Msa0882430:intron | 45.0% | |
! | CATAGACCTGAGTTGGGAAT+TGG | - | chr6_1:31742936-31742955 | Msa0882430:intron | 45.0% |
TCTATCCCAATTCCCAACTC+AGG | + | chr6_1:31742945-31742964 | None:intergenic | 45.0% | |
! | CTCGGCTCCCTTTTATCTAT+AGG | + | chr6_1:31743166-31743185 | None:intergenic | 45.0% |
! | TTGAGAGGATTAGGGCCTTT+TGG | - | chr6_1:31743599-31743618 | Msa0882430:intron | 45.0% |
! | GATTAGGGCCTTTTGGCATT+GGG | - | chr6_1:31743606-31743625 | Msa0882430:intron | 45.0% |
TCCTACTTCCCAATGCCAAA+AGG | + | chr6_1:31743617-31743636 | None:intergenic | 45.0% | |
TGGTCCTTCTATAAAGCTCG+TGG | - | chr6_1:31743785-31743804 | Msa0882430:intron | 45.0% | |
ACCAACTGAGCTAAGCTCAT+GGG | + | chr6_1:31744103-31744122 | None:intergenic | 45.0% | |
TACCAACTGAGCTAAGCTCA+TGG | + | chr6_1:31744104-31744123 | None:intergenic | 45.0% | |
! | TGAGCTTAGCTCAGTTGGTA+AGG | - | chr6_1:31744104-31744123 | Msa0882430:intron | 45.0% |
AGATGGTTCAAGTCGAGGTT+TGG | - | chr6_1:31744549-31744568 | Msa0882430:intron | 45.0% | |
CTCGGATCTTTGCAAGTTTC+TGG | + | chr6_1:31744703-31744722 | None:intergenic | 45.0% | |
CAGGTCAGAATTGCAGAAGA+TGG | - | chr6_1:31744739-31744758 | Msa0882430:intron | 45.0% | |
GCTGGGTTGTAAAGCATGAT+TGG | + | chr6_1:31744803-31744822 | None:intergenic | 45.0% | |
CAAAATCCCTGCCTTCTCAA+GGG | - | chr6_1:31744823-31744842 | Msa0882430:intron | 45.0% | |
!! | CTTGTTGATGGCCTACATCA+CGG | - | chr6_1:31744898-31744917 | Msa0882430:intron | 45.0% |
TTCAAGGGAAGACCTTACCA+AGG | - | chr6_1:31745040-31745059 | Msa0882430:intron | 45.0% | |
AGGTAGTACAATCTACCAGG+GGG | + | chr6_1:31745401-31745420 | None:intergenic | 45.0% | |
TGTTGCCATCTTCGAAAGTG+AGG | - | chr6_1:31746042-31746061 | Msa0882430:five_prime_UTR | 45.0% | |
CAAGACCTCACTTTCGAAGA+TGG | + | chr6_1:31746050-31746069 | None:intergenic | 45.0% | |
CATCTTCGAAAGTGAGGTCT+TGG | - | chr6_1:31746048-31746067 | Msa0882430:five_prime_UTR | 45.0% | |
TTGAAGGGAAGGGAAGGGAA+GGG | + | chr6_1:31735699-31735718 | None:intergenic | 50.0% | |
ATTGAAGGGAAGGGAAGGGA+AGG | + | chr6_1:31735700-31735719 | None:intergenic | 50.0% | |
TGTGTTGCATAGCAGAGACG+AGG | - | chr6_1:31736335-31736354 | Msa0882430:intron | 50.0% | |
ATAGCAGAGACGAGGATGTG+CGG | - | chr6_1:31736343-31736362 | Msa0882430:intron | 50.0% | |
GAGGGGAGTCAAATCACTAG+AGG | - | chr6_1:31736512-31736531 | Msa0882430:intron | 50.0% | |
TTGTAGCCAAGCCCACTTAG+TGG | - | chr6_1:31736618-31736637 | Msa0882430:intron | 50.0% | |
TGTAGCCAAGCCCACTTAGT+GGG | - | chr6_1:31736619-31736638 | Msa0882430:intron | 50.0% | |
! | CATATCCCACTAAGTGGGCT+TGG | + | chr6_1:31736627-31736646 | None:intergenic | 50.0% |
TTGTTGGAAATCCCACCCTG+AGG | - | chr6_1:31737080-31737099 | Msa0882430:CDS | 50.0% | |
TGTTGGAAATCCCACCCTGA+GGG | - | chr6_1:31737081-31737100 | Msa0882430:CDS | 50.0% | |
TTACCAAACACACCCCCTCA+GGG | + | chr6_1:31737098-31737117 | None:intergenic | 50.0% | |
CTAGGGGCAGATCGCAATTA+AGG | + | chr6_1:31737126-31737145 | None:intergenic | 50.0% | |
!! | TTGTGCCGGCTTGTCTTTGA+GGG | - | chr6_1:31737151-31737170 | Msa0882430:intron | 50.0% |
! | GGGTGGATTTAGTCCCACAT+CGG | - | chr6_1:31737173-31737192 | Msa0882430:intron | 50.0% |
ATGTGTTTGAACCTGGAGGC+TGG | - | chr6_1:31737947-31737966 | Msa0882430:intron | 50.0% | |
CTGCGTATCAGTATGTCTGC+AGG | - | chr6_1:31738002-31738021 | Msa0882430:intron | 50.0% | |
GCTGTGTGTGTTCTCTGTAG+TGG | - | chr6_1:31738062-31738081 | Msa0882430:intron | 50.0% | |
! | CCTGCACTTTGATTCGAAGC+TGG | + | chr6_1:31738095-31738114 | None:intergenic | 50.0% |
CCAGCTTCGAATCAAAGTGC+AGG | - | chr6_1:31738092-31738111 | Msa0882430:intron | 50.0% | |
ATACGCAGCTTCTGTGGGAT+TGG | - | chr6_1:31738242-31738261 | Msa0882430:intron | 50.0% | |
GCTGAATTTGTCATGGGAGC+CGG | - | chr6_1:31738385-31738404 | Msa0882430:intron | 50.0% | |
!!! | AGTTTTGGTGCCCTGTTGTG+TGG | - | chr6_1:31738447-31738466 | Msa0882430:intron | 50.0% |
!!! | GTTTTGGTGCCCTGTTGTGT+GGG | - | chr6_1:31738448-31738467 | Msa0882430:intron | 50.0% |
!!! | TTTTGGTGCCCTGTTGTGTG+GGG | - | chr6_1:31738449-31738468 | Msa0882430:intron | 50.0% |
GAGGATCTATGGCTAGTGGT+TGG | + | chr6_1:31739577-31739596 | None:intergenic | 50.0% | |
! | TGGATGGAGGTAGGTGTTGT+TGG | - | chr6_1:31740327-31740346 | Msa0882430:CDS | 50.0% |
!! | TGAAGTGCTGTCGTGCCTAT+TGG | + | chr6_1:31740432-31740451 | None:intergenic | 50.0% |
ACAACGGTGAGTTCCTTTGC+TGG | - | chr6_1:31740734-31740753 | Msa0882430:intron | 50.0% | |
!! | TGGTTGTAGATGATGGTGGC+AGG | - | chr6_1:31741074-31741093 | Msa0882430:intron | 50.0% |
CGATGACTTCGTTTCTGCAG+AGG | - | chr6_1:31741153-31741172 | Msa0882430:CDS | 50.0% | |
GCACTGCATGTAGATAGCCA+AGG | + | chr6_1:31741357-31741376 | None:intergenic | 50.0% | |
AGGGACAGCCAAGAACACAT+AGG | - | chr6_1:31741416-31741435 | Msa0882430:intron | 50.0% | |
TTCCAGGGCCTATGTGTTCT+TGG | + | chr6_1:31741427-31741446 | None:intergenic | 50.0% | |
TGTGGAGGGGATATACAGCA+TGG | - | chr6_1:31741462-31741481 | Msa0882430:intron | 50.0% | |
GAGGGGATATACAGCATGGA+AGG | - | chr6_1:31741466-31741485 | Msa0882430:intron | 50.0% | |
TTTGAGGGCCACAATACTGG+AGG | - | chr6_1:31741910-31741929 | Msa0882430:CDS | 50.0% | |
GAATGAGAGGGCCACAATAC+CGG | - | chr6_1:31742111-31742130 | Msa0882430:intron | 50.0% | |
GTCTGCTCAGAAGCGAAACA+GGG | + | chr6_1:31742157-31742176 | None:intergenic | 50.0% | |
TGTCTGCTCAGAAGCGAAAC+AGG | + | chr6_1:31742158-31742177 | None:intergenic | 50.0% | |
!! | AAGGGGTGTTTGTGAGCTCT+TGG | - | chr6_1:31742325-31742344 | Msa0882430:intron | 50.0% |
!! | AGGGGTGTTTGTGAGCTCTT+GGG | - | chr6_1:31742326-31742345 | Msa0882430:intron | 50.0% |
TGTTTGTGAGCTCTTGGGTG+TGG | - | chr6_1:31742331-31742350 | Msa0882430:intron | 50.0% | |
CTGGACCTATATGGTATGGG+AGG | - | chr6_1:31742590-31742609 | Msa0882430:intron | 50.0% | |
TGATTGGCAAGGGACTTGCA+GGG | + | chr6_1:31742752-31742771 | None:intergenic | 50.0% | |
ATGATTGGCAAGGGACTTGC+AGG | + | chr6_1:31742753-31742772 | None:intergenic | 50.0% | |
TGATCGTAGAAGGGACAGAG+TGG | - | chr6_1:31742857-31742876 | Msa0882430:intron | 50.0% | |
TAGAAGGGACAGAGTGGATC+AGG | - | chr6_1:31742863-31742882 | Msa0882430:intron | 50.0% | |
AGAAGGGACAGAGTGGATCA+GGG | - | chr6_1:31742864-31742883 | Msa0882430:intron | 50.0% | |
GCGCGTCTATTACATTTCCG+AGG | + | chr6_1:31743353-31743372 | None:intergenic | 50.0% | |
! | GGATTAGGGCCTTTTGGCAT+TGG | - | chr6_1:31743605-31743624 | Msa0882430:intron | 50.0% |
!! | GCCTTTTGGCATTGGGAAGT+AGG | - | chr6_1:31743613-31743632 | Msa0882430:intron | 50.0% |
CAACTGAGCTAAGCTCATGG+GGG | + | chr6_1:31744101-31744120 | None:intergenic | 50.0% | |
CCAACTGAGCTAAGCTCATG+GGG | + | chr6_1:31744102-31744121 | None:intergenic | 50.0% | |
!!! | AGAAGGCAGGGATTTTGGCT+GGG | + | chr6_1:31744820-31744839 | None:intergenic | 50.0% |
! | CCTTGAGAAGGCAGGGATTT+TGG | + | chr6_1:31744825-31744844 | None:intergenic | 50.0% |
CCAAAATCCCTGCCTTCTCA+AGG | - | chr6_1:31744822-31744841 | Msa0882430:intron | 50.0% | |
ATGCTCTCACATTCTGCCTG+AGG | + | chr6_1:31744853-31744872 | None:intergenic | 50.0% | |
CGTGATGTAGGCCATCAACA+AGG | + | chr6_1:31744900-31744919 | None:intergenic | 50.0% | |
TGCTCTAGCCAGTAGCAATG+GGG | + | chr6_1:31744997-31745016 | None:intergenic | 50.0% | |
GTGCTCTAGCCAGTAGCAAT+GGG | + | chr6_1:31744998-31745017 | None:intergenic | 50.0% | |
AATACACACCTGCAAGGCCT+TGG | + | chr6_1:31745060-31745079 | None:intergenic | 50.0% | |
!! | GTTGCTTCGTTGGTTCAGCA+GGG | + | chr6_1:31745869-31745888 | None:intergenic | 50.0% |
!! | TGTTGCTTCGTTGGTTCAGC+AGG | + | chr6_1:31745870-31745889 | None:intergenic | 50.0% |
TGAAGGGAAGGGAAGGGAAG+GGG | + | chr6_1:31735698-31735717 | None:intergenic | 55.0% | |
!! | GAATCGCGTTGGTTCGAGAG+CGG | + | chr6_1:31735746-31735765 | None:intergenic | 55.0% |
GCTCTCGAACCAACGCGATT+CGG | - | chr6_1:31735745-31735764 | Msa0882430:three_prime_UTR | 55.0% | |
CTCTCGAACCAACGCGATTC+GGG | - | chr6_1:31735746-31735765 | Msa0882430:three_prime_UTR | 55.0% | |
! | GAACCAACGCGATTCGGGTT+CGG | - | chr6_1:31735751-31735770 | Msa0882430:three_prime_UTR | 55.0% |
ATCGCTATCATCTTCGCCGC+CGG | + | chr6_1:31735824-31735843 | None:intergenic | 55.0% | |
GTTGGAAATCCCACCCTGAG+GGG | - | chr6_1:31737082-31737101 | Msa0882430:CDS | 55.0% | |
TTGGAAATCCCACCCTGAGG+GGG | - | chr6_1:31737083-31737102 | Msa0882430:CDS | 55.0% | |
CTTACCAAACACACCCCCTC+AGG | + | chr6_1:31737099-31737118 | None:intergenic | 55.0% | |
GGGGCAGATCGCAATTAAGG+TGG | + | chr6_1:31737123-31737142 | None:intergenic | 55.0% | |
AAGCCGGCACAAGGCAACTA+GGG | + | chr6_1:31737143-31737162 | None:intergenic | 55.0% | |
CTCAAAGACAAGCCGGCACA+AGG | + | chr6_1:31737152-31737171 | None:intergenic | 55.0% | |
!! | CTTGTGCCGGCTTGTCTTTG+AGG | - | chr6_1:31737150-31737169 | Msa0882430:intron | 55.0% |
!! | TGTGCCGGCTTGTCTTTGAG+GGG | - | chr6_1:31737152-31737171 | Msa0882430:intron | 55.0% |
TTGAACCTGGAGGCTGGCAT+AGG | - | chr6_1:31737953-31737972 | Msa0882430:intron | 55.0% | |
!! | GCTTCTGTGGGATTGGTCAG+TGG | - | chr6_1:31738249-31738268 | Msa0882430:intron | 55.0% |
TGGGGCGGCTGAATTTGTCA+TGG | - | chr6_1:31738378-31738397 | Msa0882430:intron | 55.0% | |
GGGGCGGCTGAATTTGTCAT+GGG | - | chr6_1:31738379-31738398 | Msa0882430:intron | 55.0% | |
ATTTGTCATGGGAGCCGGTC+AGG | - | chr6_1:31738390-31738409 | Msa0882430:intron | 55.0% | |
CATTCTCGGGTAGCCTCACT+AGG | - | chr6_1:31739289-31739308 | Msa0882430:intron | 55.0% | |
! | GGCTTTGCATCGACCTAGTG+AGG | + | chr6_1:31739305-31739324 | None:intergenic | 55.0% |
ACCACGGGGTTTGACTCAAG+CGG | - | chr6_1:31739665-31739684 | Msa0882430:intron | 55.0% | |
CTCCAAGCACTTGCAGTACC+CGG | - | chr6_1:31740303-31740322 | Msa0882430:intron | 55.0% | |
TCCAAGCACTTGCAGTACCC+GGG | - | chr6_1:31740304-31740323 | Msa0882430:intron | 55.0% | |
AACACCTACCTCCATCCACC+CGG | + | chr6_1:31740325-31740344 | None:intergenic | 55.0% | |
TCTTCCGGTCTTGATGGGGA+AGG | - | chr6_1:31740539-31740558 | Msa0882430:intron | 55.0% | |
CCAACCTTCCCCATCAAGAC+CGG | + | chr6_1:31740546-31740565 | None:intergenic | 55.0% | |
AGCCAAGAACACATAGGCCC+TGG | - | chr6_1:31741422-31741441 | Msa0882430:intron | 55.0% | |
! | AGCACACAGCATTGGAGCTG+TGG | - | chr6_1:31742292-31742311 | Msa0882430:intron | 55.0% |
! | GCACACAGCATTGGAGCTGT+GGG | - | chr6_1:31742293-31742312 | Msa0882430:intron | 55.0% |
ATTGGAGCTGTGGGCAAGAC+AGG | - | chr6_1:31742302-31742321 | Msa0882430:intron | 55.0% | |
AGCTGTGGGCAAGACAGGAA+GGG | - | chr6_1:31742307-31742326 | Msa0882430:intron | 55.0% | |
! | AGTGGATCAGGGCTGGTGAA+AGG | - | chr6_1:31742875-31742894 | Msa0882430:intron | 55.0% |
! | GTGGATCAGGGCTGGTGAAA+GGG | - | chr6_1:31742876-31742895 | Msa0882430:intron | 55.0% |
GCTGGTGAAAGGGCTTAGGA+AGG | - | chr6_1:31742886-31742905 | Msa0882430:intron | 55.0% | |
! | GAGGCCCTTACCGATTACAC+AGG | + | chr6_1:31743071-31743090 | None:intergenic | 55.0% |
AATCGGTAAGGGCCTCAGTG+AGG | - | chr6_1:31743075-31743094 | Msa0882430:intron | 55.0% | |
CACACACACACACACCCTCA+AGG | - | chr6_1:31743374-31743393 | Msa0882430:intron | 55.0% | |
CCCCATGAGCTTAGCTCAGT+TGG | - | chr6_1:31744099-31744118 | Msa0882430:intron | 55.0% | |
GGCGAAGATGGTTCAAGTCG+AGG | - | chr6_1:31744544-31744563 | Msa0882430:intron | 55.0% | |
!! | GAGAAGGCAGGGATTTTGGC+TGG | + | chr6_1:31744821-31744840 | None:intergenic | 55.0% |
TCCAGCAACCCCATTGCTAC+TGG | - | chr6_1:31744986-31745005 | Msa0882430:intron | 55.0% | |
CGTGCTCTAGCCAGTAGCAA+TGG | + | chr6_1:31744999-31745018 | None:intergenic | 55.0% | |
AGACCTTACCAAGGCCTTGC+AGG | - | chr6_1:31745049-31745068 | Msa0882430:intron | 55.0% | |
ACACCTGCAAGGCCTTGGTA+AGG | + | chr6_1:31745055-31745074 | None:intergenic | 55.0% | |
GATCCGAACCCGAATCGCGT+TGG | + | chr6_1:31735757-31735776 | None:intergenic | 60.0% | |
CAAACACACCCCCTCAGGGT+GGG | + | chr6_1:31737094-31737113 | None:intergenic | 60.0% | |
TGCCCCTAGTTGCCTTGTGC+CGG | - | chr6_1:31737137-31737156 | Msa0882430:intron | 60.0% | |
AGCCGGCACAAGGCAACTAG+GGG | + | chr6_1:31737142-31737161 | None:intergenic | 60.0% | |
CAAGCCGGCACAAGGCAACT+AGG | + | chr6_1:31737144-31737163 | None:intergenic | 60.0% | |
!! | GTGCCGGCTTGTCTTTGAGG+GGG | - | chr6_1:31737153-31737172 | Msa0882430:intron | 60.0% |
CCACCCCCTCAAAGACAAGC+CGG | + | chr6_1:31737159-31737178 | None:intergenic | 60.0% | |
ATTCGCCTATGCCAGCCTCC+AGG | + | chr6_1:31737961-31737980 | None:intergenic | 60.0% | |
ACCGCTTGAGTCAAACCCCG+TGG | + | chr6_1:31739669-31739688 | None:intergenic | 60.0% | |
! | ACCCGGGTACTGCAAGTGCT+TGG | + | chr6_1:31740308-31740327 | None:intergenic | 60.0% |
AAGCACTTGCAGTACCCGGG+TGG | - | chr6_1:31740307-31740326 | Msa0882430:intron | 60.0% | |
ACTTGCAGTACCCGGGTGGA+TGG | - | chr6_1:31740311-31740330 | Msa0882430:intron | 60.0% | |
ACACCTACCTCCATCCACCC+GGG | + | chr6_1:31740324-31740343 | None:intergenic | 60.0% | |
CCGGTCTTGATGGGGAAGGT+TGG | - | chr6_1:31740543-31740562 | Msa0882430:intron | 60.0% | |
GTTAATGGTGCGCGGGGATC+AGG | - | chr6_1:31740688-31740707 | Msa0882430:intron | 60.0% | |
TGAGAGGGCCACAATACCGG+AGG | - | chr6_1:31742114-31742133 | Msa0882430:intron | 60.0% | |
GAGCTGTGGGCAAGACAGGA+AGG | - | chr6_1:31742306-31742325 | Msa0882430:intron | 60.0% | |
GCTGTGGGCAAGACAGGAAG+GGG | - | chr6_1:31742308-31742327 | Msa0882430:intron | 60.0% | |
! | CAGGGCTGGTGAAAGGGCTT+AGG | - | chr6_1:31742882-31742901 | Msa0882430:intron | 60.0% |
! | AAGGTCTGGGGTTCGAACCC+CGG | - | chr6_1:31744145-31744164 | Msa0882430:intron | 60.0% |
GGCACTCCCTTGAGAAGGCA+GGG | + | chr6_1:31744832-31744851 | None:intergenic | 60.0% | |
AGGCACTCCCTTGAGAAGGC+AGG | + | chr6_1:31744833-31744852 | None:intergenic | 60.0% | |
! | CCTGAGGCACTCCCTTGAGA+AGG | + | chr6_1:31744837-31744856 | None:intergenic | 60.0% |
!! | CCTTCTCAAGGGAGTGCCTC+AGG | - | chr6_1:31744834-31744853 | Msa0882430:intron | 60.0% |
GCCAGTAGCAATGGGGTTGC+TGG | + | chr6_1:31744990-31745009 | None:intergenic | 60.0% | |
!! | TGATGGTGGCGGTGTTGGCG+AGG | + | chr6_1:31735798-31735817 | None:intergenic | 65.0% |
AACACCGCCACCATCACCGC+CGG | - | chr6_1:31735802-31735821 | Msa0882430:three_prime_UTR | 65.0% | |
GCTATCATCTTCGCCGCCGG+CGG | + | chr6_1:31735821-31735840 | None:intergenic | 65.0% | |
CCAAACACACCCCCTCAGGG+TGG | + | chr6_1:31737095-31737114 | None:intergenic | 65.0% | |
! | CCACCCTGAGGGGGTGTGTT+TGG | - | chr6_1:31737092-31737111 | Msa0882430:CDS | 65.0% |
! | CCGGCTTGTCTTTGAGGGGG+TGG | - | chr6_1:31737156-31737175 | Msa0882430:intron | 65.0% |
TGCAGTACCCGGGTGGATGG+AGG | - | chr6_1:31740314-31740333 | Msa0882430:CDS | 65.0% | |
GTACCCGGGTGGATGGAGGT+AGG | - | chr6_1:31740318-31740337 | Msa0882430:CDS | 65.0% | |
GGGACAGAGTGGATCAGGGC+TGG | - | chr6_1:31742868-31742887 | Msa0882430:intron | 65.0% | |
TGTTGGCGAGGCGGCGGTGA+GGG | + | chr6_1:31735786-31735805 | None:intergenic | 70.0% | |
!! | TGGTGGCGGTGTTGGCGAGG+CGG | + | chr6_1:31735795-31735814 | None:intergenic | 70.0% |
!! | GGCGGTGATGGTGGCGGTGT+TGG | + | chr6_1:31735803-31735822 | None:intergenic | 70.0% |
ATCTTCGCCGCCGGCGGTGA+TGG | + | chr6_1:31735815-31735834 | None:intergenic | 70.0% | |
GCGAGGCGGCGGTGAGGGAT+CGG | + | chr6_1:31735781-31735800 | None:intergenic | 75.0% | |
! | GTGTTGGCGAGGCGGCGGTG+AGG | + | chr6_1:31735787-31735806 | None:intergenic | 75.0% |
!! | TGGCGGTGTTGGCGAGGCGG+CGG | + | chr6_1:31735792-31735811 | None:intergenic | 75.0% |
ACCGCCACCATCACCGCCGG+CGG | - | chr6_1:31735805-31735824 | Msa0882430:three_prime_UTR | 75.0% | |
! | TTCGCCGCCGGCGGTGATGG+TGG | + | chr6_1:31735812-31735831 | None:intergenic | 75.0% |
!!! | GCCGCCGGCGGTGATGGTGG+CGG | + | chr6_1:31735809-31735828 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6_1 | gene | 31735610 | 31746239 | 31735610 | ID=Msa0882430;Name=Msa0882430 |
chr6_1 | mRNA | 31735610 | 31746239 | 31735610 | ID=Msa0882430-mRNA-1;Parent=Msa0882430;Name=Msa0882430-mRNA-1;_AED=0.03;_eAED=0.03;_QI=223|1|1|1|0.90|1|12|316|490 |
chr6_1 | exon | 31735610 | 31736024 | 31735610 | ID=Msa0882430-mRNA-1:exon:7851;Parent=Msa0882430-mRNA-1 |
chr6_1 | exon | 31736779 | 31736886 | 31736779 | ID=Msa0882430-mRNA-1:exon:7850;Parent=Msa0882430-mRNA-1 |
chr6_1 | exon | 31736987 | 31737153 | 31736987 | ID=Msa0882430-mRNA-1:exon:7849;Parent=Msa0882430-mRNA-1 |
chr6_1 | exon | 31737284 | 31737410 | 31737284 | ID=Msa0882430-mRNA-1:exon:7848;Parent=Msa0882430-mRNA-1 |
chr6_1 | exon | 31739416 | 31739577 | 31739416 | ID=Msa0882430-mRNA-1:exon:7847;Parent=Msa0882430-mRNA-1 |
chr6_1 | exon | 31740312 | 31740475 | 31740312 | ID=Msa0882430-mRNA-1:exon:7846;Parent=Msa0882430-mRNA-1 |
chr6_1 | exon | 31741110 | 31741203 | 31741110 | ID=Msa0882430-mRNA-1:exon:7845;Parent=Msa0882430-mRNA-1 |
chr6_1 | exon | 31741289 | 31741413 | 31741289 | ID=Msa0882430-mRNA-1:exon:7844;Parent=Msa0882430-mRNA-1 |
chr6_1 | exon | 31741514 | 31741659 | 31741514 | ID=Msa0882430-mRNA-1:exon:7843;Parent=Msa0882430-mRNA-1 |
chr6_1 | exon | 31741847 | 31741935 | 31741847 | ID=Msa0882430-mRNA-1:exon:7842;Parent=Msa0882430-mRNA-1 |
chr6_1 | exon | 31745580 | 31745645 | 31745580 | ID=Msa0882430-mRNA-1:exon:7841;Parent=Msa0882430-mRNA-1 |
chr6_1 | exon | 31745891 | 31746239 | 31745891 | ID=Msa0882430-mRNA-1:exon:7840;Parent=Msa0882430-mRNA-1 |
chr6_1 | five_prime_UTR | 31746017 | 31746239 | 31746017 | ID=Msa0882430-mRNA-1:five_prime_utr;Parent=Msa0882430-mRNA-1 |
chr6_1 | CDS | 31745891 | 31746016 | 31745891 | ID=Msa0882430-mRNA-1:cds;Parent=Msa0882430-mRNA-1 |
chr6_1 | CDS | 31745580 | 31745645 | 31745580 | ID=Msa0882430-mRNA-1:cds;Parent=Msa0882430-mRNA-1 |
chr6_1 | CDS | 31741847 | 31741935 | 31741847 | ID=Msa0882430-mRNA-1:cds;Parent=Msa0882430-mRNA-1 |
chr6_1 | CDS | 31741514 | 31741659 | 31741514 | ID=Msa0882430-mRNA-1:cds;Parent=Msa0882430-mRNA-1 |
chr6_1 | CDS | 31741289 | 31741413 | 31741289 | ID=Msa0882430-mRNA-1:cds;Parent=Msa0882430-mRNA-1 |
chr6_1 | CDS | 31741110 | 31741203 | 31741110 | ID=Msa0882430-mRNA-1:cds;Parent=Msa0882430-mRNA-1 |
chr6_1 | CDS | 31740312 | 31740475 | 31740312 | ID=Msa0882430-mRNA-1:cds;Parent=Msa0882430-mRNA-1 |
chr6_1 | CDS | 31739416 | 31739577 | 31739416 | ID=Msa0882430-mRNA-1:cds;Parent=Msa0882430-mRNA-1 |
chr6_1 | CDS | 31737284 | 31737410 | 31737284 | ID=Msa0882430-mRNA-1:cds;Parent=Msa0882430-mRNA-1 |
chr6_1 | CDS | 31736987 | 31737153 | 31736987 | ID=Msa0882430-mRNA-1:cds;Parent=Msa0882430-mRNA-1 |
chr6_1 | CDS | 31736779 | 31736886 | 31736779 | ID=Msa0882430-mRNA-1:cds;Parent=Msa0882430-mRNA-1 |
chr6_1 | CDS | 31735926 | 31736024 | 31735926 | ID=Msa0882430-mRNA-1:cds;Parent=Msa0882430-mRNA-1 |
chr6_1 | three_prime_UTR | 31735610 | 31735925 | 31735610 | ID=Msa0882430-mRNA-1:three_prime_utr;Parent=Msa0882430-mRNA-1 |
Gene Sequence |
Protein sequence |