AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0882430


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0882430 MtrunA17_Chr6g0461991 99.796 490 1 0 1 490 1 490 0.0 1018
Msa0882430 MtrunA17_Chr3g0099931 25.131 382 258 7 101 467 111 479 1.23e-34 135
Msa0882430 MtrunA17_Chr5g0430851 24.869 382 259 7 101 467 111 479 2.98e-34 134
Msa0882430 MtrunA17_Chr3g0078851 25.882 340 206 6 143 462 142 455 6.30e-22 98.6
Msa0882430 MtrunA17_Chr1g0153091 27.679 224 125 5 103 297 16 231 2.33e-16 78.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0882430 AT5G23670.1 85.031 481 72 0 1 481 1 481 0.0 876
Msa0882430 AT5G23670.2 85.031 481 72 0 1 481 1 481 0.0 876
Msa0882430 AT3G48780.2 83.542 480 79 0 1 480 1 480 0.0 864
Msa0882430 AT3G48780.1 83.542 480 79 0 1 480 1 480 0.0 864
Msa0882430 AT3G48790.1 76.149 348 76 1 143 490 7 347 0.0 561
Msa0882430 AT3G48790.2 75.776 322 71 1 169 490 1 315 0.0 518
Msa0882430 AT4G36480.2 25.745 369 246 8 103 456 112 467 7.86e-32 128
Msa0882430 AT4G36480.1 25.745 369 246 8 103 456 112 467 7.86e-32 128
Msa0882430 AT5G04620.2 25.641 390 247 8 95 466 97 461 1.82e-26 112
Msa0882430 AT5G04620.1 27.193 342 207 7 143 466 11 328 3.46e-26 109
Msa0882430 AT4G36480.3 29.565 230 152 4 103 329 112 334 1.93e-25 107
Msa0882430 AT5G04620.3 25.926 270 170 5 95 346 97 354 1.31e-19 91.7

Find 166 sgRNAs with CRISPR-Local

Find 750 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCGGATCTTTGCAAGTTTC+TGG -0.006417 6_1:+31737127 None:intergenic
CCTTGAGAAGGCAGGGATTT+TGG 0.130317 6_1:+31737005 None:intergenic
TTTATAGGCATATACATATT+TGG 0.174681 6_1:-31739562 Msa0882430:intron
TTCCAGGGCCTATGTGTTCT+TGG 0.189231 6_1:+31740403 None:intergenic
TAGATTATATCTTCGGATTC+AGG 0.217064 6_1:-31745579 Msa0882430:intron
TGAAGGAACCTGAAGATTAT+TGG 0.257979 6_1:+31745882 None:intergenic
AACCACAACTCAATTGTTAA+TGG 0.265196 6_1:-31741154 Msa0882430:CDS
TGCTATTCTTCCGGTCTTGA+TGG 0.282578 6_1:-31741294 Msa0882430:CDS
TCTTCCATAAAAGTTATTCT+TGG 0.284948 6_1:-31737304 Msa0882430:CDS
TCCGAAAACAAAAGATTATA+TGG 0.285098 6_1:+31735739 None:intergenic
TACGGTTTGCTCTTCGCTTT+CGG 0.288207 6_1:-31745949 Msa0882430:CDS
TAAAGCATGATTGGCATTAC+AGG 0.302338 6_1:+31737036 None:intergenic
GCCAGTAGCAATGGGGTTGC+TGG 0.321595 6_1:+31736840 None:intergenic
GAGCAAACCGTAACTGAAAT+AGG 0.338413 6_1:+31745960 None:intergenic
GCTCTCGAACCAACGCGATT+CGG 0.339423 6_1:-31746082 Msa0882430:five_prime_UTR
GGTTATGCACCGATCTGTTT+AGG 0.340054 6_1:-31745623 Msa0882430:CDS
AGATGGGATTTGAAGTTCTT+GGG 0.340919 6_1:-31737071 Msa0882430:CDS
AAGATGGGATTTGAAGTTCT+TGG 0.344461 6_1:-31737072 Msa0882430:CDS
AATAACCATTATCTTCTTCC+AGG 0.349116 6_1:+31740387 None:intergenic
TCGGATCTTTGCAAGTTTCT+GGG 0.355382 6_1:+31737128 None:intergenic
AAGACATCGACTTACTTTAC+TGG 0.356195 6_1:+31741632 None:intergenic
CATGGTGATTTCAAACTAAC+TGG 0.358111 6_1:-31735820 Msa0882430:three_prime_UTR
TTGGGATCATATAACTATCT+TGG 0.360855 6_1:-31741606 Msa0882430:CDS
AAGGGGTGTTTGTGAGCTCT+TGG 0.362856 6_1:-31739502 Msa0882430:CDS
GGGACATTCACCAAATCATT+TGG 0.367081 6_1:-31739447 Msa0882430:CDS
CTCTCGAACCAACGCGATTC+GGG 0.369620 6_1:-31746081 Msa0882430:five_prime_UTR
TGAAGGGAAGGGAAGGGAAG+GGG 0.372598 6_1:+31746132 None:intergenic
GTGCAGTTCCAATAATCTTC+AGG 0.379110 6_1:-31745890 Msa0882430:intron
TGTTGCTTCGTTGGTTCAGC+AGG 0.388343 6_1:+31735960 None:intergenic
GTTAATGGTGCGCGGGGATC+AGG 0.391282 6_1:-31741139 Msa0882430:CDS
AAGTAAAATATGAAAATGTA+TGG 0.396011 6_1:+31746177 None:intergenic
TCCACATGATCCAAATGATT+TGG 0.396058 6_1:+31739437 None:intergenic
GATATTATTTGTTGTGCAGC+TGG 0.396206 6_1:+31737325 None:intergenic
GCATCAGGAGCACTTGATAT+TGG 0.396763 6_1:+31741898 None:intergenic
CATCTTCGAAAGTGAGGTCT+TGG 0.398848 6_1:-31735779 Msa0882430:three_prime_UTR
GACAAACTCTGCTATTCTTC+CGG 0.400770 6_1:-31741303 Msa0882430:CDS
ATTGGAGCTGTGGGCAAGAC+AGG 0.401548 6_1:-31739525 Msa0882430:CDS
AGACCTTACCAAGGCCTTGC+AGG 0.401800 6_1:-31736778 Msa0882430:intron
CAGGTCAGAATTGCAGAAGA+TGG 0.405068 6_1:-31737088 Msa0882430:CDS
ATATTCGTAGATTATATCTT+CGG 0.409758 6_1:-31745586 Msa0882430:CDS
GACAGCACTTCACAATGAAT+TGG 0.415510 6_1:-31741387 Msa0882430:CDS
CCTTCTCAAGGGAGTGCCTC+AGG 0.415913 6_1:-31736993 Msa0882430:CDS
ATCTTCGCCGCCGGCGGTGA+TGG 0.416441 6_1:+31746015 None:intergenic
GCTATTCTTCCGGTCTTGAT+GGG 0.419350 6_1:-31741293 Msa0882430:CDS
AGGTTATATTGCAGGATCTA+AGG 0.420449 6_1:-31739415 Msa0882430:intron
TGTTTGTGAGCTCTTGGGTG+TGG 0.428313 6_1:-31739496 Msa0882430:CDS
TCATGTGGAGGTTATATTGC+AGG 0.428713 6_1:-31739423 Msa0882430:CDS
AGCAGTGTAGGTGATCTAAT+TGG 0.428852 6_1:-31735996 Msa0882430:CDS
TCCAGCAACCCCATTGCTAC+TGG 0.437632 6_1:-31736841 Msa0882430:CDS
GCTGGGTTGTAAAGCATGAT+TGG 0.438158 6_1:+31737027 None:intergenic
GCATATCAGCTTCTCATTCA+AGG 0.439438 6_1:-31736803 Msa0882430:CDS
GAACCAACGCGATTCGGGTT+CGG 0.440299 6_1:-31746076 Msa0882430:five_prime_UTR
GGCGGTGATGGTGGCGGTGT+TGG 0.441956 6_1:+31746027 None:intergenic
CTCACAACCTATTTCAGTTA+CGG 0.442612 6_1:-31745967 Msa0882430:CDS
AGGGGTGTTTGTGAGCTCTT+GGG 0.442767 6_1:-31739501 Msa0882430:CDS
CTCAATTGTTAATGGTGCGC+GGG 0.442812 6_1:-31741146 Msa0882430:CDS
TGTTGGCGAGGCGGCGGTGA+GGG 0.445332 6_1:+31746044 None:intergenic
ATGTATGGGTTGTGTTTGGC+TGG 0.445783 6_1:+31746192 None:intergenic
CTCCAAGCACTTGCAGTACC+CGG 0.449501 6_1:-31741524 Msa0882430:CDS
GCTTTCTCTCTCTAGATTGA+AGG 0.457137 6_1:+31746115 None:intergenic
ATGAATACGAAGATTATTGA+AGG 0.465959 6_1:-31735878 Msa0882430:three_prime_UTR
GTGCTCTAGCCAGTAGCAAT+GGG 0.469424 6_1:+31736832 None:intergenic
GAAAATGTATGGGTTGTGTT+TGG 0.472341 6_1:+31746188 None:intergenic
GCGAGGCGGCGGTGAGGGAT+CGG 0.473802 6_1:+31746049 None:intergenic
AAAGTTATTCTTGGCGAAGA+TGG 0.473909 6_1:-31737295 Msa0882430:CDS
AGGCACTCCCTTGAGAAGGC+AGG 0.474944 6_1:+31736997 None:intergenic
TCTTGTTGTTGTTGCTTCGT+TGG 0.475549 6_1:+31735951 None:intergenic
GAAGTTGCATAAAGATGTGC+AGG 0.479396 6_1:+31737358 None:intergenic
TTGCATATAGCTATGACCTC+TGG 0.480390 6_1:+31740322 None:intergenic
CTCTCTCTAGATTGAAGGGA+AGG 0.484764 6_1:+31746120 None:intergenic
ATTGAAGGGAAGGGAAGGGA+AGG 0.488457 6_1:+31746130 None:intergenic
TTGAAGGGAAGGGAAGGGAA+GGG 0.489158 6_1:+31746131 None:intergenic
AGTAAGTCGATGTCTTAACT+TGG 0.490464 6_1:-31741625 Msa0882430:CDS
ACCCGGGTACTGCAAGTGCT+TGG 0.490715 6_1:+31741522 None:intergenic
ATCGCTATCATCTTCGCCGC+CGG 0.490856 6_1:+31746006 None:intergenic
TGCTGATATTGATATTATGA+TGG 0.491151 6_1:-31739469 Msa0882430:CDS
CAAGACCTCACTTTCGAAGA+TGG 0.491790 6_1:+31735780 None:intergenic
TAGGCCCTGGAAGAAGATAA+TGG 0.496204 6_1:-31740392 Msa0882430:CDS
ACCAAATCATTTGGATCATG+TGG 0.496543 6_1:-31739438 Msa0882430:CDS
AGGTCAGAATTGCAGAAGAT+GGG 0.499602 6_1:-31737087 Msa0882430:CDS
GAGCTGTGGGCAAGACAGGA+AGG 0.499919 6_1:-31739521 Msa0882430:CDS
ATAGAGCTGTAGTTATTGTA+AGG 0.500227 6_1:-31735855 Msa0882430:three_prime_UTR
TGGCGGTGTTGGCGAGGCGG+CGG 0.500793 6_1:+31746038 None:intergenic
TATCAAGTGCTCCTGATGCT+TGG 0.504033 6_1:-31741894 Msa0882430:CDS
TTGGATGAAGCACACAGCAT+TGG 0.505271 6_1:-31739543 Msa0882430:CDS
ATATTATTTGTTGTGCAGCT+GGG 0.510480 6_1:+31737326 None:intergenic
GCTGTGGGCAAGACAGGAAG+GGG 0.511167 6_1:-31739519 Msa0882430:CDS
AAGATAATGGTTATTGTGGA+GGG 0.512429 6_1:-31740379 Msa0882430:CDS
CATATCAGCTTCTCATTCAA+GGG 0.517556 6_1:-31736802 Msa0882430:CDS
TCGTAGGTTATTAGCAGTGT+AGG 0.517821 6_1:-31736008 Msa0882430:intron
AACACTTCTTCTAGATGTGC+TGG 0.517825 6_1:+31740451 None:intergenic
GTGTTGGCGAGGCGGCGGTG+AGG 0.518340 6_1:+31746043 None:intergenic
CACCATTAACAATTGAGTTG+TGG 0.520038 6_1:+31741152 None:intergenic
TTGGCTGGAGATGATTCAAA+TGG 0.520076 6_1:+31746207 None:intergenic
AATACACACCTGCAAGGCCT+TGG 0.520353 6_1:+31736770 None:intergenic
CCAAAATCCCTGCCTTCTCA+AGG 0.521117 6_1:-31737005 Msa0882430:CDS
GCCGCCGGCGGTGATGGTGG+CGG 0.521750 6_1:+31746021 None:intergenic
TATACACATCATCTAATGAC+GGG 0.522159 6_1:+31735706 None:intergenic
ACTACATCAAACCAAGCATC+AGG 0.526562 6_1:+31741883 None:intergenic
GGCGAAGATGGTTCAAGTCG+AGG 0.527475 6_1:-31737283 Msa0882430:intron
GAAGATAATGGTTATTGTGG+AGG 0.528355 6_1:-31740380 Msa0882430:CDS
AGCCAAGAACACATAGGCCC+TGG 0.529238 6_1:-31740405 Msa0882430:CDS
AACACCTACCTCCATCCACC+CGG 0.529626 6_1:+31741505 None:intergenic
CGTGCTCTAGCCAGTAGCAA+TGG 0.529943 6_1:+31736831 None:intergenic
AACACCGCCACCATCACCGC+CGG 0.530695 6_1:-31746025 Msa0882430:five_prime_UTR
GAAGAAGATAATGGTTATTG+TGG 0.532678 6_1:-31740383 Msa0882430:CDS
CTTTCTCTCTCTAGATTGAA+GGG 0.536115 6_1:+31746116 None:intergenic
TGATGGTGGCGGTGTTGGCG+AGG 0.537970 6_1:+31746032 None:intergenic
AGCACACAGCATTGGAGCTG+TGG 0.542128 6_1:-31739535 Msa0882430:CDS
TTCGCCGCCGGCGGTGATGG+TGG 0.545187 6_1:+31746018 None:intergenic
TCTTCCGGTCTTGATGGGGA+AGG 0.547239 6_1:-31741288 Msa0882430:intron
GATGGGATTTGAAGTTCTTG+GGG 0.548122 6_1:-31737070 Msa0882430:CDS
GTTGTGAGTGCAGTGAGATA+CGG 0.551717 6_1:+31745982 None:intergenic
ATAACCATTATCTTCTTCCA+GGG 0.552346 6_1:+31740388 None:intergenic
GGCACTCCCTTGAGAAGGCA+GGG 0.562551 6_1:+31736998 None:intergenic
CCAACCTTCCCCATCAAGAC+CGG 0.565338 6_1:+31741284 None:intergenic
ACTTGCAGTACCCGGGTGGA+TGG 0.568260 6_1:-31741516 Msa0882430:CDS
GCACACAGCATTGGAGCTGT+GGG 0.572363 6_1:-31739534 Msa0882430:CDS
GTAAGTCGATGTCTTAACTT+GGG 0.573929 6_1:-31741624 Msa0882430:CDS
CTATTCTTCCGGTCTTGATG+GGG 0.578052 6_1:-31741292 Msa0882430:CDS
GCTATCATCTTCGCCGCCGG+CGG 0.580983 6_1:+31746009 None:intergenic
TGTTGCCATCTTCGAAAGTG+AGG 0.583134 6_1:-31735785 Msa0882430:three_prime_UTR
TATTATTTGTTGTGCAGCTG+GGG 0.583240 6_1:+31737327 None:intergenic
TCCAAGCACTTGCAGTACCC+GGG 0.584468 6_1:-31741523 Msa0882430:CDS
AGTAAAATATGAAAATGTAT+GGG 0.585225 6_1:+31746178 None:intergenic
CCTGAGGCACTCCCTTGAGA+AGG 0.586563 6_1:+31736993 None:intergenic
CTATACACATCATCTAATGA+CGG 0.586611 6_1:+31735705 None:intergenic
AGCTGTGGGCAAGACAGGAA+GGG 0.586982 6_1:-31739520 Msa0882430:CDS
TCTCTCTAGATTGAAGGGAA+GGG 0.587907 6_1:+31746121 None:intergenic
ATATATTCAATTGAATTCAA+CGG 0.588470 6_1:-31746232 None:intergenic
GAGGGGATATACAGCATGGA+AGG 0.589376 6_1:-31740361 Msa0882430:CDS
ACACCTGCAAGGCCTTGGTA+AGG 0.589912 6_1:+31736775 None:intergenic
ACCGCCACCATCACCGCCGG+CGG 0.590809 6_1:-31746022 Msa0882430:five_prime_UTR
TGGTGGCGGTGTTGGCGAGG+CGG 0.591566 6_1:+31746035 None:intergenic
TCTAGATTGAAGGGAAGGGA+AGG 0.592678 6_1:+31746125 None:intergenic
TGGCTGGAGATGATTCAAAT+GGG 0.593940 6_1:+31746208 None:intergenic
ATGCTCTCACATTCTGCCTG+AGG 0.595562 6_1:+31736977 None:intergenic
TCTTCAAGTCCTAAACAGAT+CGG 0.597403 6_1:+31745614 None:intergenic
GCTGATATTGATATTATGAT+GGG 0.597573 6_1:-31739468 Msa0882430:CDS
AGCACTTCACAATGAATTGG+AGG 0.599950 6_1:-31741384 Msa0882430:CDS
CTAGATTGAAGGGAAGGGAA+GGG 0.600043 6_1:+31746126 None:intergenic
AGATAATGGTTATTGTGGAG+GGG 0.602319 6_1:-31740378 Msa0882430:CDS
TGCAGTACCCGGGTGGATGG+AGG 0.604267 6_1:-31741513 Msa0882430:intron
GTTGCTTCGTTGGTTCAGCA+GGG 0.605794 6_1:+31735961 None:intergenic
CAAAATCCCTGCCTTCTCAA+GGG 0.606834 6_1:-31737004 Msa0882430:CDS
AAATCATTTGGATCATGTGG+AGG 0.617237 6_1:-31739435 Msa0882430:CDS
ACTCAATTGTTAATGGTGCG+CGG 0.623218 6_1:-31741147 Msa0882430:CDS
GATCCGAACCCGAATCGCGT+TGG 0.625681 6_1:+31746073 None:intergenic
ACGAAGCAACAACAACAAGA+TGG 0.626909 6_1:-31735948 Msa0882430:CDS
TCAATTGTTAATGGTGCGCG+GGG 0.631969 6_1:-31741145 Msa0882430:CDS
TGTGGAGGGGATATACAGCA+TGG 0.637466 6_1:-31740365 Msa0882430:CDS
AGAGCTTTGCAAACTTCCAG+AGG 0.643274 6_1:-31740338 Msa0882430:CDS
TTCAATGTATCAATCACTCG+AGG 0.654322 6_1:+31741555 None:intergenic
ACACCTACCTCCATCCACCC+GGG 0.655848 6_1:+31741506 None:intergenic
CAGTTAGTTTGAAATCACCA+TGG 0.660874 6_1:+31735821 None:intergenic
ATTCAAAATACACACCTGCA+AGG 0.666529 6_1:+31736764 None:intergenic
GTTACGAGAACAAATTGCTG+AGG 0.666746 6_1:-31740431 Msa0882430:CDS
ATTATTTGTTGTGCAGCTGG+GGG 0.677207 6_1:+31737328 None:intergenic
TTACGAGAACAAATTGCTGA+GGG 0.680475 6_1:-31740430 Msa0882430:CDS
TGCTCTAGCCAGTAGCAATG+GGG 0.685686 6_1:+31736833 None:intergenic
AAGCACTTGCAGTACCCGGG+TGG 0.689971 6_1:-31741520 Msa0882430:CDS
AGGGACAGCCAAGAACACAT+AGG 0.690788 6_1:-31740411 Msa0882430:CDS
TTCAAGGGAAGACCTTACCA+AGG 0.690942 6_1:-31736787 Msa0882430:CDS
ATACACATCATCTAATGACG+GGG 0.694297 6_1:+31735707 None:intergenic
AAGTTGCATAAAGATGTGCA+GGG 0.717646 6_1:+31737359 None:intergenic
CTGATATTGATATTATGATG+GGG 0.726376 6_1:-31739467 Msa0882430:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAAAAAAATAGTTATTAAA+CGG + chr6_1:31738492-31738511 None:intergenic 10.0%
!! AAATAAATAAAACATCTATT+AGG + chr6_1:31738994-31739013 None:intergenic 10.0%
!!! ATTTAATTATTATTTGTTGA+AGG - chr6_1:31739434-31739453 Msa0882430:CDS 10.0%
!!! TTTAATTATTATTTGTTGAA+GGG - chr6_1:31739435-31739454 Msa0882430:CDS 10.0%
!!! AATATTCTTTTCAATTTTTT+AGG - chr6_1:31740007-31740026 Msa0882430:intron 10.0%
!! ATTAAAAAATGCATAATTAT+AGG + chr6_1:31740033-31740052 None:intergenic 10.0%
!!! TTTTTTAATTTTTTTGTGTT+AGG - chr6_1:31740044-31740063 Msa0882430:intron 10.0%
!!! TTTTTAATTTTTTTGTGTTA+GGG - chr6_1:31740045-31740064 Msa0882430:intron 10.0%
!!! AATGAAAAATTTACTTTTTA+GGG + chr6_1:31741045-31741064 None:intergenic 10.0%
!!! AAATGAAAAATTTACTTTTT+AGG + chr6_1:31741046-31741065 None:intergenic 10.0%
!! AGTAAAATATGAAAATGTAT+GGG + chr6_1:31735652-31735671 None:intergenic 15.0%
!! AAGTAAAATATGAAAATGTA+TGG + chr6_1:31735653-31735672 None:intergenic 15.0%
!! AAATGCATAAACAAAAAAAT+TGG + chr6_1:31735989-31736008 None:intergenic 15.0%
!! ATAGATTATTGTTGAAATTT+GGG + chr6_1:31737280-31737299 None:intergenic 15.0%
!! AATAGATTATTGTTGAAATT+TGG + chr6_1:31737281-31737300 None:intergenic 15.0%
!!! ATTTGTTTTTTAAGTAGTTT+TGG - chr6_1:31738290-31738309 Msa0882430:intron 15.0%
!!! TACACATTGATTTTTTTTAA+AGG + chr6_1:31738614-31738633 None:intergenic 15.0%
!! ATGTGTATATATATAGAAAA+AGG - chr6_1:31738627-31738646 Msa0882430:intron 15.0%
!!! AGTTTTGTTTCAATTTTTTT+GGG - chr6_1:31738785-31738804 Msa0882430:intron 15.0%
!!! CTCATGTTTTTTTTTTTTTT+TGG - chr6_1:31739216-31739235 Msa0882430:intron 15.0%
!!! GTTTTTTTTTTTTTTTGGAA+TGG - chr6_1:31739221-31739240 Msa0882430:intron 15.0%
!!! TTTTTCATGTTTTGAATTTT+TGG - chr6_1:31739888-31739907 Msa0882430:intron 15.0%
!!! TTTTAATTTTTTTGTGTTAG+GGG - chr6_1:31740046-31740065 Msa0882430:intron 15.0%
!!! AATTTTTCATTTCAATAGAT+TGG - chr6_1:31741054-31741073 Msa0882430:intron 15.0%
!! AGTTCATTTAAAAAAAATTC+GGG + chr6_1:31741677-31741696 None:intergenic 15.0%
!! CAGTTCATTTAAAAAAAATT+CGG + chr6_1:31741678-31741697 None:intergenic 15.0%
!!! AGAGTTTATAAATGTTATTT+TGG + chr6_1:31744640-31744659 None:intergenic 15.0%
!! ACAATAAATAAAAGTTAAAG+TGG + chr6_1:31745198-31745217 None:intergenic 15.0%
!! CAAAAAAATTGGAAAAAAGA+AGG + chr6_1:31735978-31735997 None:intergenic 20.0%
!! ATATTCGTAGATTATATCTT+CGG - chr6_1:31736241-31736260 Msa0882430:intron 20.0%
!!! GTTTCTATTATAGTTTTTCT+AGG + chr6_1:31736548-31736567 None:intergenic 20.0%
!! TATAATAGAAACTGTTAAGA+AGG - chr6_1:31736556-31736575 Msa0882430:intron 20.0%
!! TTTCAATGATTAAAGATGTT+TGG - chr6_1:31736794-31736813 Msa0882430:CDS 20.0%
!!! GCTATTTCTATAATAAAAGA+TGG - chr6_1:31737001-31737020 Msa0882430:CDS 20.0%
!! AAAAGCTTATGTATAATTGT+TGG - chr6_1:31737064-31737083 Msa0882430:CDS 20.0%
!! TAGATTATTGTTGAAATTTG+GGG + chr6_1:31737279-31737298 None:intergenic 20.0%
!! ATAGCTTAAAAACAGATTAT+AGG + chr6_1:31737342-31737361 None:intergenic 20.0%
!!! TAAGTTTTTTGAATGTGTTT+GGG + chr6_1:31737434-31737453 None:intergenic 20.0%
!!! TTAAGTTTTTTGAATGTGTT+TGG + chr6_1:31737435-31737454 None:intergenic 20.0%
!! CCAAAAATAGCTTATTAAAA+CGG + chr6_1:31737519-31737538 None:intergenic 20.0%
!!! GCTATGATTTTTTAATAGAA+AGG - chr6_1:31737733-31737752 Msa0882430:intron 20.0%
!!! TTTAATAGAAAGGTTTTGAT+TGG - chr6_1:31737743-31737762 Msa0882430:intron 20.0%
!!! TTAATAGAAAGGTTTTGATT+GGG - chr6_1:31737744-31737763 Msa0882430:intron 20.0%
!!! TTTCCATACATTTTCTTATA+TGG - chr6_1:31738718-31738737 Msa0882430:intron 20.0%
!! TAACCATATAAGAAAATGTA+TGG + chr6_1:31738724-31738743 None:intergenic 20.0%
!!! CAGTTTTGTTTCAATTTTTT+TGG - chr6_1:31738784-31738803 Msa0882430:intron 20.0%
!!! GTTTTGTTTCAATTTTTTTG+GGG - chr6_1:31738786-31738805 Msa0882430:intron 20.0%
!! GAAATTGTACTTTAACATTT+AGG - chr6_1:31738810-31738829 Msa0882430:intron 20.0%
!! TTTAGGTCAATTTATTTGAT+TGG - chr6_1:31738827-31738846 Msa0882430:intron 20.0%
!! AATTTCCCAATTAAAAGAAA+AGG + chr6_1:31738933-31738952 None:intergenic 20.0%
!! AATAAAACATCTATTAGGAA+AGG + chr6_1:31738989-31739008 None:intergenic 20.0%
!!! TATTGGGTTAAATTTGTTTA+GGG + chr6_1:31739163-31739182 None:intergenic 20.0%
!!! TTATTGGGTTAAATTTGTTT+AGG + chr6_1:31739164-31739183 None:intergenic 20.0%
!! GTCTAGACAATTTATTTATT+GGG + chr6_1:31739179-31739198 None:intergenic 20.0%
!! AGTCTAGACAATTTATTTAT+TGG + chr6_1:31739180-31739199 None:intergenic 20.0%
!! TGATATCAATAAAACATTCT+CGG - chr6_1:31739275-31739294 Msa0882430:intron 20.0%
!! TAAAGAAAAAGATCCTTATT+TGG - chr6_1:31739362-31739381 Msa0882430:intron 20.0%
!! TATATGTATTTGTTTAACCA+CGG - chr6_1:31739649-31739668 Msa0882430:intron 20.0%
!!! AATAAGAATGGTTCTAATTA+AGG + chr6_1:31739741-31739760 None:intergenic 20.0%
!!! AAATATGTTTTTGTTTTAGC+TGG - chr6_1:31739844-31739863 Msa0882430:intron 20.0%
!! AAAAATAAGTCAAATTACAG+TGG + chr6_1:31740108-31740127 None:intergenic 20.0%
!! TTATCAAATTTATCCAAATG+TGG - chr6_1:31740401-31740420 Msa0882430:CDS 20.0%
!! TCACATACTTTATTAAAAAG+AGG - chr6_1:31740809-31740828 Msa0882430:intron 20.0%
!! CACATACTTTATTAAAAAGA+GGG - chr6_1:31740810-31740829 Msa0882430:intron 20.0%
!!! GGTATGTTAATGATATTTTA+AGG - chr6_1:31740842-31740861 Msa0882430:intron 20.0%
!!! AATTTGAAGGAAATTTTTGT+AGG - chr6_1:31740970-31740989 Msa0882430:intron 20.0%
!!! ATTTGAAGGAAATTTTTGTA+GGG - chr6_1:31740971-31740990 Msa0882430:intron 20.0%
!!! TTTTGTTGCTAAATATCTAT+AGG - chr6_1:31741114-31741133 Msa0882430:CDS 20.0%
!!! ATATATGTATTTTGAATGCT+TGG - chr6_1:31741230-31741249 Msa0882430:intron 20.0%
!! AGCTATATGCAAAAAATATA+AGG - chr6_1:31741516-31741535 Msa0882430:CDS 20.0%
!!! TAGTATTTCTTTTACATGAT+TGG + chr6_1:31741784-31741803 None:intergenic 20.0%
!! TAAAATATTTCACCTCTAAA+AGG - chr6_1:31741802-31741821 Msa0882430:intron 20.0%
!!! AAAATATTTCACCTCTAAAA+GGG - chr6_1:31741803-31741822 Msa0882430:intron 20.0%
!!! TCTAAAAGGGATTTTTTTAT+GGG - chr6_1:31741816-31741835 Msa0882430:intron 20.0%
!! TAAAATATTTCACATCGAAA+AGG - chr6_1:31742000-31742019 Msa0882430:intron 20.0%
!! AAAATATTTCACATCGAAAA+GGG - chr6_1:31742001-31742020 Msa0882430:intron 20.0%
!!! TCTGATATAAGAACTTTTAA+TGG - chr6_1:31742051-31742070 Msa0882430:intron 20.0%
!!! AAAAAGTTTTGTTAAGTGAA+CGG - chr6_1:31742088-31742107 Msa0882430:intron 20.0%
!! AGAAATAAACCAAAGTAAAA+TGG + chr6_1:31742230-31742249 None:intergenic 20.0%
!! TTTATAGGCATATACATATT+TGG - chr6_1:31742265-31742284 Msa0882430:intron 20.0%
!! AATAAGTTACTAAAATATGC+TGG - chr6_1:31742477-31742496 Msa0882430:intron 20.0%
!!! TAGAAATGTTAGTTTCTTAT+AGG - chr6_1:31742618-31742637 Msa0882430:intron 20.0%
!! TAACTAAACTAACTCTTATT+AGG + chr6_1:31743118-31743137 None:intergenic 20.0%
!!! GTTAGTTTAGTTAAGTAATA+AGG - chr6_1:31743125-31743144 Msa0882430:intron 20.0%
!! AGTTAAGTAATAAGGAAATA+CGG - chr6_1:31743133-31743152 Msa0882430:intron 20.0%
!! CAATTTGTGTATTGTATTAT+AGG - chr6_1:31743299-31743318 Msa0882430:intron 20.0%
!! TTAGTTAGTTCATTAGTTAA+TGG - chr6_1:31743494-31743513 Msa0882430:intron 20.0%
!! TAGTTAGTTCATTAGTTAAT+GGG - chr6_1:31743495-31743514 Msa0882430:intron 20.0%
!! TACTATTGTTTGTAATCAAA+GGG - chr6_1:31743652-31743671 Msa0882430:intron 20.0%
!! CTTAATGATATTAATAGAAC+TGG + chr6_1:31743843-31743862 None:intergenic 20.0%
!!! ATCCATAGATTTTAAATAGT+GGG + chr6_1:31744074-31744093 None:intergenic 20.0%
!!! AATCCATAGATTTTAAATAG+TGG + chr6_1:31744075-31744094 None:intergenic 20.0%
!!! CTATTTAAAATCTATGGATT+AGG - chr6_1:31744075-31744094 Msa0882430:intron 20.0%
!!! CCATAGATTTATTTTTTATG+TGG + chr6_1:31744174-31744193 None:intergenic 20.0%
!! CCACATAAAAAATAAATCTA+TGG - chr6_1:31744171-31744190 Msa0882430:intron 20.0%
!! ATATGAAACAAATCCAATAA+AGG + chr6_1:31744316-31744335 None:intergenic 20.0%
!!! TAGGTATGATAGATTTTTTA+TGG + chr6_1:31744362-31744381 None:intergenic 20.0%
!! TTTATAAACTCTGTATACTT+TGG - chr6_1:31744648-31744667 Msa0882430:intron 20.0%
!!! GAATTAAATTGTTTTTGTGT+AGG - chr6_1:31744674-31744693 Msa0882430:intron 20.0%
!!! TGAAAAAATTGCTATTTTCT+CGG + chr6_1:31744721-31744740 None:intergenic 20.0%
!! AAATGCATCTAGTATATTTA+GGG + chr6_1:31745455-31745474 None:intergenic 20.0%
!! TAAATGCATCTAGTATATTT+AGG + chr6_1:31745456-31745475 None:intergenic 20.0%
!! ATATATGCAAAAAATTCCAA+AGG - chr6_1:31745638-31745657 Msa0882430:intron 20.0%
!!! TCCATATAATCTTTTGTTTT+CGG - chr6_1:31746087-31746106 Msa0882430:five_prime_UTR 20.0%
! AACTGTGTGCAATTTAATAA+TGG + chr6_1:31736277-31736296 None:intergenic 25.0%
! TAGTGATTAATAGAACACTA+TGG - chr6_1:31736582-31736601 Msa0882430:intron 25.0%
! AGTGATTAATAGAACACTAT+GGG - chr6_1:31736583-31736602 Msa0882430:intron 25.0%
! TAAATTGAGCTTATCTATAC+TGG + chr6_1:31737460-31737479 None:intergenic 25.0%
!!! CCGTTTTAATAAGCTATTTT+TGG - chr6_1:31737516-31737535 Msa0882430:intron 25.0%
! TAAGCATTTGTGAACTATTT+GGG + chr6_1:31737606-31737625 None:intergenic 25.0%
! ATAAGCATTTGTGAACTATT+TGG + chr6_1:31737607-31737626 None:intergenic 25.0%
! TATCTACCTTTATACACATT+TGG + chr6_1:31737658-31737677 None:intergenic 25.0%
! GTATAAAGGTAGATATAATC+TGG - chr6_1:31737663-31737682 Msa0882430:intron 25.0%
!! TGATATGGTTTTCTAATATC+TGG - chr6_1:31737689-31737708 Msa0882430:intron 25.0%
! TTTCTAATATCTGGATAGTA+TGG - chr6_1:31737698-31737717 Msa0882430:intron 25.0%
! TATGTTCCATATTCTATGTT+GGG + chr6_1:31738145-31738164 None:intergenic 25.0%
! ATATGTTCCATATTCTATGT+TGG + chr6_1:31738146-31738165 None:intergenic 25.0%
! AACATATCATCTATTGATCA+AGG - chr6_1:31738159-31738178 Msa0882430:intron 25.0%
! ATTTCAACACTAGTAGTATT+TGG + chr6_1:31738683-31738702 None:intergenic 25.0%
! TAAGATGGTAAACCATAAAA+TGG - chr6_1:31739131-31739150 Msa0882430:intron 25.0%
!! TTAGGGTTAAATCCATTTTA+TGG + chr6_1:31739146-31739165 None:intergenic 25.0%
!!! GAATGTTTTATTGATATCAG+AGG + chr6_1:31739274-31739293 None:intergenic 25.0%
! GATATCAATAAAACATTCTC+GGG - chr6_1:31739276-31739295 Msa0882430:intron 25.0%
! CAACAAGAAAAAATGAATGA+AGG + chr6_1:31739553-31739572 None:intergenic 25.0%
! TGTTGATATTTCCATACTTT+AGG + chr6_1:31739607-31739626 None:intergenic 25.0%
! ATATGTATTTGTTTAACCAC+GGG - chr6_1:31739650-31739669 Msa0882430:intron 25.0%
! TTCTAATTAAGGATCAAACT+CGG + chr6_1:31739730-31739749 None:intergenic 25.0%
! ATGTACAATGTGAATAAGAA+TGG + chr6_1:31739753-31739772 None:intergenic 25.0%
!! ATTCACATTGTACATACTTT+TGG - chr6_1:31739758-31739777 Msa0882430:intron 25.0%
!! AAACAAAAACATATTTTCCC+TGG + chr6_1:31739840-31739859 None:intergenic 25.0%
!!! TAGTGTTTTGTTATTGTCAT+TGG + chr6_1:31739981-31740000 None:intergenic 25.0%
! TCATTGATCTAATACTTTAC+AGG - chr6_1:31740624-31740643 Msa0882430:intron 25.0%
! CATTGATCTAATACTTTACA+GGG - chr6_1:31740625-31740644 Msa0882430:intron 25.0%
! CTAACTGATAAAACTTATTC+TGG + chr6_1:31740763-31740782 None:intergenic 25.0%
! TTAAAAAGAGGGTCAAATAT+TGG - chr6_1:31740821-31740840 Msa0882430:intron 25.0%
!!! TTGAAAGTTGGTATATACAT+AGG - chr6_1:31741001-31741020 Msa0882430:intron 25.0%
!!! TGAAAGTTGGTATATACATA+GGG - chr6_1:31741002-31741021 Msa0882430:intron 25.0%
! GAGGAATAAAATTAAGATGA+AGG - chr6_1:31741172-31741191 Msa0882430:CDS 25.0%
! AATGGAGAAAGAAAAAGAAA+AGG + chr6_1:31741591-31741610 None:intergenic 25.0%
! CAATTTGAACACTCAAAAAA+TGG + chr6_1:31741609-31741628 None:intergenic 25.0%
! TTAGCTTAAATGAACAAATG+CGG + chr6_1:31741748-31741767 None:intergenic 25.0%
!! CATAAAAAAATCCCTTTTAG+AGG + chr6_1:31741817-31741836 None:intergenic 25.0%
!!! CTCTAAAAGGGATTTTTTTA+TGG - chr6_1:31741815-31741834 Msa0882430:intron 25.0%
!!! AAAAGTTTTGTTAAGTGAAC+GGG - chr6_1:31742089-31742108 Msa0882430:intron 25.0%
! GAATTCTTCCATATCTTTAT+AGG - chr6_1:31742250-31742269 Msa0882430:intron 25.0%
! TGTATATGCCTATAAAGATA+TGG + chr6_1:31742261-31742280 None:intergenic 25.0%
! TGCTGATATTGATATTATGA+TGG - chr6_1:31742358-31742377 Msa0882430:intron 25.0%
! GCTGATATTGATATTATGAT+GGG - chr6_1:31742359-31742378 Msa0882430:intron 25.0%
! CTGATATTGATATTATGATG+GGG - chr6_1:31742360-31742379 Msa0882430:intron 25.0%
! GGTATGTACATTTAAATAGT+AGG - chr6_1:31742433-31742452 Msa0882430:intron 25.0%
!!! TGCAAAATTGATAACCATTT+TGG + chr6_1:31742778-31742797 None:intergenic 25.0%
!! TTGTTATTCTGTAACTTTGA+TGG + chr6_1:31742807-31742826 None:intergenic 25.0%
! CATCTTTCCTATAGATAAAA+GGG - chr6_1:31743156-31743175 Msa0882430:intron 25.0%
! CTCTGATTAATAATATCAGT+TGG - chr6_1:31743270-31743289 Msa0882430:intron 25.0%
! AGGTAAGAAATATGTTGTAT+GGG + chr6_1:31743333-31743352 None:intergenic 25.0%
! ATACAACATATTTCTTACCT+CGG - chr6_1:31743333-31743352 Msa0882430:intron 25.0%
! CTACTATTGTTTGTAATCAA+AGG - chr6_1:31743651-31743670 Msa0882430:intron 25.0%
! TATATCAATACTGAAAATGG+GGG + chr6_1:31743685-31743704 None:intergenic 25.0%
! GTATATCAATACTGAAAATG+GGG + chr6_1:31743686-31743705 None:intergenic 25.0%
! GGTATATCAATACTGAAAAT+GGG + chr6_1:31743687-31743706 None:intergenic 25.0%
! TGGTATATCAATACTGAAAA+TGG + chr6_1:31743688-31743707 None:intergenic 25.0%
! TTCAGAATTAAGACGAATAT+TGG - chr6_1:31743765-31743784 Msa0882430:intron 25.0%
!! TCCATAGATTTTAAATAGTG+GGG + chr6_1:31744073-31744092 None:intergenic 25.0%
!!! TTTATTTTTTATGTGGTGTC+CGG + chr6_1:31744167-31744186 None:intergenic 25.0%
! TGTTTCTTATGTTAAAGTCT+TGG - chr6_1:31744404-31744423 Msa0882430:intron 25.0%
! TCTTCCATAAAAGTTATTCT+TGG - chr6_1:31744523-31744542 Msa0882430:intron 25.0%
!!! GAGAAAATAGCAATTTTTTC+AGG - chr6_1:31744720-31744739 Msa0882430:intron 25.0%
!! GAAAAAGCACAGAAAAAAAA+AGG + chr6_1:31744941-31744960 None:intergenic 25.0%
!!! TTTTTTTTCTGTGCTTTTTC+AGG - chr6_1:31744941-31744960 Msa0882430:intron 25.0%
!! TTTTGAATCTCATCTCATTA+AGG - chr6_1:31745078-31745097 Msa0882430:intron 25.0%
! TTGCGTAATTATTTGTCAAT+GGG - chr6_1:31745158-31745177 Msa0882430:intron 25.0%
!! TAATACTATTAGTCTGTCTT+TGG - chr6_1:31745503-31745522 Msa0882430:intron 25.0%
! TGGAGATGAAAAATCAATAT+TGG - chr6_1:31745523-31745542 Msa0882430:intron 25.0%
! ATGAATACGAAGATTATTGA+AGG - chr6_1:31745949-31745968 Msa0882430:CDS 25.0%
! TCCGAAAACAAAAGATTATA+TGG + chr6_1:31746091-31746110 None:intergenic 25.0%
AAAAAGAAGGTGAGAATTGA+AGG + chr6_1:31735965-31735984 None:intergenic 30.0%
TAGATTATATCTTCGGATTC+AGG - chr6_1:31736248-31736267 Msa0882430:intron 30.0%
AGCACTTATAGTAGAAAAGA+TGG - chr6_1:31736415-31736434 Msa0882430:intron 30.0%
GTGATTAATAGAACACTATG+GGG - chr6_1:31736584-31736603 Msa0882430:intron 30.0%
GTGAACTAATTGATACATGA+TGG - chr6_1:31736691-31736710 Msa0882430:intron 30.0%
! AATTGATACATGATGGAACT+AGG - chr6_1:31736698-31736717 Msa0882430:intron 30.0%
GAAGTTAAATTGTTACACGA+TGG - chr6_1:31736900-31736919 Msa0882430:intron 30.0%
CTTGATCAGAGTTTATAAAG+AGG - chr6_1:31737208-31737227 Msa0882430:intron 30.0%
!!! CTGTTTTTAAGCTATCTTAG+AGG - chr6_1:31737347-31737366 Msa0882430:CDS 30.0%
AATAAGCTGAACACAACTTA+TGG - chr6_1:31737551-31737570 Msa0882430:intron 30.0%
ACCTTTATACACATTTGGAT+TGG + chr6_1:31737653-31737672 None:intergenic 30.0%
GATATAATCTGGCTATGATA+TGG - chr6_1:31737674-31737693 Msa0882430:intron 30.0%
GTTATGGAAATTTCCAAGAT+AGG + chr6_1:31737795-31737814 None:intergenic 30.0%
ATAAACGAATCCTCTTGATT+TGG + chr6_1:31737819-31737838 None:intergenic 30.0%
ACACAATTTAATCTCATCTC+CGG + chr6_1:31737910-31737929 None:intergenic 30.0%
ACAGCAAATAAACAATAGCT+CGG + chr6_1:31738047-31738066 None:intergenic 30.0%
ATGTTCCATATTCTATGTTG+GGG + chr6_1:31738144-31738163 None:intergenic 30.0%
AAATCTTTGTATTACTCCTC+TGG - chr6_1:31738211-31738230 Msa0882430:intron 30.0%
!!! TTTAAGTAGTTTTGGCATAG+AGG - chr6_1:31738298-31738317 Msa0882430:intron 30.0%
TGTGGTGATATGCAATATTA+TGG - chr6_1:31738358-31738377 Msa0882430:intron 30.0%
GTGGTGATATGCAATATTAT+GGG - chr6_1:31738359-31738378 Msa0882430:intron 30.0%
TGGTGATATGCAATATTATG+GGG - chr6_1:31738360-31738379 Msa0882430:intron 30.0%
GATACTTCTATGTACAGTAT+TGG - chr6_1:31738412-31738431 Msa0882430:intron 30.0%
!!! GTTTCAGCTCTAGATTTTAT+TGG - chr6_1:31738536-31738555 Msa0882430:intron 30.0%
GGCATAACAAATAAAATCCA+AGG + chr6_1:31738662-31738681 None:intergenic 30.0%
!! CTAGTGTTGAAATGTGTTTT+TGG - chr6_1:31738690-31738709 Msa0882430:intron 30.0%
GGTCAATTTATTTGATTGGA+AGG - chr6_1:31738831-31738850 Msa0882430:intron 30.0%
TGAAGATCTATGATGAATTC+AGG - chr6_1:31738900-31738919 Msa0882430:intron 30.0%
! TCTGGACCTTTTCTTTTAAT+TGG - chr6_1:31738924-31738943 Msa0882430:intron 30.0%
!! CTGGACCTTTTCTTTTAATT+GGG - chr6_1:31738925-31738944 Msa0882430:intron 30.0%
TAACCACATCCTTGAATAAA+GGG + chr6_1:31739101-31739120 None:intergenic 30.0%
TTAACCACATCCTTGAATAA+AGG + chr6_1:31739102-31739121 None:intergenic 30.0%
TTATGGTTTACCATCTTAGA+TGG + chr6_1:31739129-31739148 None:intergenic 30.0%
ATGCTTCTTAGATCCAAATA+AGG + chr6_1:31739378-31739397 None:intergenic 30.0%
TAGGTTTAAATGAGGATCTA+TGG + chr6_1:31739588-31739607 None:intergenic 30.0%
! CCATACTTTAGGTTTAAATG+AGG + chr6_1:31739596-31739615 None:intergenic 30.0%
CCTCATTTAAACCTAAAGTA+TGG - chr6_1:31739593-31739612 Msa0882430:intron 30.0%
TATGTATTTGTTTAACCACG+GGG - chr6_1:31739651-31739670 Msa0882430:intron 30.0%
TCAGATAAGGTTGAATCATT+CGG - chr6_1:31739697-31739716 Msa0882430:intron 30.0%
AAAAATCCTTAAGAGGAAAG+AGG + chr6_1:31739805-31739824 None:intergenic 30.0%
! TCTTTCCTCTTAAGGATTTT+TGG - chr6_1:31739804-31739823 Msa0882430:intron 30.0%
!! TTAGCTGGTTATTTTCTACA+TGG - chr6_1:31739859-31739878 Msa0882430:intron 30.0%
!!! TCATGTTTTGAATTTTTGGC+AGG - chr6_1:31739892-31739911 Msa0882430:intron 30.0%
TTGGGATCATATAACTATCT+TGG - chr6_1:31740221-31740240 Msa0882430:intron 30.0%
AACAAACAAGTCTGTTTCAA+TGG + chr6_1:31740365-31740384 None:intergenic 30.0%
TAGCATCTAATCTATCAAGA+GGG + chr6_1:31740589-31740608 None:intergenic 30.0%
TTAGCATCTAATCTATCAAG+AGG + chr6_1:31740590-31740609 None:intergenic 30.0%
AACCACAACTCAATTGTTAA+TGG - chr6_1:31740673-31740692 Msa0882430:intron 30.0%
!! ATTCGTGTTTTTCAACACAA+CGG - chr6_1:31740718-31740737 Msa0882430:intron 30.0%
TTTATCAGTTAGTTATCGAG+TGG - chr6_1:31740771-31740790 Msa0882430:intron 30.0%
! TTTTAGTGAGACATGTCTAA+CGG + chr6_1:31740923-31740942 None:intergenic 30.0%
TAGACATGTCTCACTAAAAT+TGG - chr6_1:31740924-31740943 Msa0882430:intron 30.0%
AAAATTGGTATCACAATACG+TGG - chr6_1:31740939-31740958 Msa0882430:intron 30.0%
AAATTGGTATCACAATACGT+GGG - chr6_1:31740940-31740959 Msa0882430:intron 30.0%
TAGGGACTAAAATTGAAAGT+TGG - chr6_1:31740989-31741008 Msa0882430:intron 30.0%
! AATAGATTGGTTGTAGATGA+TGG - chr6_1:31741067-31741086 Msa0882430:intron 30.0%
! TTTTCAGTTTTTCTGTCTGT+TGG - chr6_1:31741290-31741309 Msa0882430:CDS 30.0%
! ACTACTATTCATTTTCTCCT+TGG - chr6_1:31741337-31741356 Msa0882430:CDS 30.0%
ATAACCATTATCTTCTTCCA+GGG + chr6_1:31741442-31741461 None:intergenic 30.0%
AATAACCATTATCTTCTTCC+AGG + chr6_1:31741443-31741462 None:intergenic 30.0%
! GAAGAAGATAATGGTTATTG+TGG - chr6_1:31741444-31741463 Msa0882430:intron 30.0%
! AAGATAATGGTTATTGTGGA+GGG - chr6_1:31741448-31741467 Msa0882430:intron 30.0%
AGAAAAGGAAAAATGCATGT+GGG + chr6_1:31741576-31741595 None:intergenic 30.0%
AAGAAAAGGAAAAATGCATG+TGG + chr6_1:31741577-31741596 None:intergenic 30.0%
TTGTACTTGTAACCTGTAAA+TGG - chr6_1:31741698-31741717 Msa0882430:intron 30.0%
ATTTAAGCTAACGACTCAAA+TGG - chr6_1:31741757-31741776 Msa0882430:intron 30.0%
ATGATTACCTGATAGTAAGA+AGG + chr6_1:31741967-31741986 None:intergenic 30.0%
! TCGAAAAGGGATTTGTTTAT+CGG - chr6_1:31742014-31742033 Msa0882430:intron 30.0%
ATTTGTTTATCGGATACTTG+CGG - chr6_1:31742024-31742043 Msa0882430:intron 30.0%
! ATTAAATGATGGAATACCTC+CGG + chr6_1:31742133-31742152 None:intergenic 30.0%
TTTGTTACCTTCTTACTATC+AGG - chr6_1:31742194-31742213 Msa0882430:intron 30.0%
!!! TCTCTTTTGCCATTTTACTT+TGG - chr6_1:31742218-31742237 Msa0882430:intron 30.0%
ACCATACTATATTCTCCTTT+CGG - chr6_1:31742515-31742534 Msa0882430:intron 30.0%
! ATTCCAGATTTTTAACCGAA+AGG + chr6_1:31742533-31742552 None:intergenic 30.0%
! TTCGGTTAAAAATCTGGAAT+AGG - chr6_1:31742533-31742552 Msa0882430:intron 30.0%
AGGTTAGAGAGAATTATACA+AGG - chr6_1:31742660-31742679 Msa0882430:intron 30.0%
! GAAATATCTGTACTCTTTTG+TGG - chr6_1:31742698-31742717 Msa0882430:intron 30.0%
!! ATAACCATTTTGGAGATGAT+TGG + chr6_1:31742768-31742787 None:intergenic 30.0%
AACAGTTTCTACATATGGTT+AGG + chr6_1:31742838-31742857 None:intergenic 30.0%
CTTAGGAAGGAAAATGAATA+TGG - chr6_1:31742899-31742918 Msa0882430:intron 30.0%
AATCTCAAACATGGAGATAT+GGG + chr6_1:31743044-31743063 None:intergenic 30.0%
TAATCTCAAACATGGAGATA+TGG + chr6_1:31743045-31743064 None:intergenic 30.0%
GCATCTTTCCTATAGATAAA+AGG - chr6_1:31743155-31743174 Msa0882430:intron 30.0%
! ATCTATGTTGTCACTTGTAT+AGG - chr6_1:31743190-31743209 Msa0882430:intron 30.0%
ATGTGATCATTTAGGCAATT+GGG - chr6_1:31743214-31743233 Msa0882430:intron 30.0%
TGTATTGTATTATAGGTCCT+AGG - chr6_1:31743306-31743325 Msa0882430:intron 30.0%
GAGGTAAGAAATATGTTGTA+TGG + chr6_1:31743334-31743353 None:intergenic 30.0%
GAAATTGAGCAAAAGAATCA+AGG + chr6_1:31743404-31743423 None:intergenic 30.0%
AATCACTCCTCTCTATTTAT+TGG + chr6_1:31743557-31743576 None:intergenic 30.0%
AAACAATAGTAGCACTTCAA+GGG + chr6_1:31743643-31743662 None:intergenic 30.0%
!! TTCAGTATTGATATACCACT+TGG - chr6_1:31743690-31743709 Msa0882430:intron 30.0%
! CCATAGATTTTAAATAGTGG+GGG + chr6_1:31744072-31744091 None:intergenic 30.0%
GACAATGCATAATATATGCA+AGG - chr6_1:31744126-31744145 Msa0882430:intron 30.0%
!!! TTATTTTTTATGTGGTGTCC+GGG + chr6_1:31744166-31744185 None:intergenic 30.0%
ACTTCAGCTGTATAAAACTA+AGG + chr6_1:31744225-31744244 None:intergenic 30.0%
!! GCTTTTTGTTTCACCTTTAT+TGG - chr6_1:31744300-31744319 Msa0882430:intron 30.0%
ATCTATCATACCTAGCTATT+AGG - chr6_1:31744368-31744387 Msa0882430:intron 30.0%
TTCAGATTATCCTAATAGCT+AGG + chr6_1:31744381-31744400 None:intergenic 30.0%
AAAGTCTTGGATTTACTTTC+AGG - chr6_1:31744417-31744436 Msa0882430:intron 30.0%
!! ATATTATTTGTTGTGCAGCT+GGG + chr6_1:31744504-31744523 None:intergenic 30.0%
! TTCGCCAAGAATAACTTTTA+TGG + chr6_1:31744530-31744549 None:intergenic 30.0%
! TCAACAAGGAGCATAATAAA+TGG + chr6_1:31744886-31744905 None:intergenic 30.0%
TTTATTATGCTCCTTGTTGA+TGG - chr6_1:31744886-31744905 Msa0882430:intron 30.0%
CATTGACAAATAATTACGCA+AGG + chr6_1:31745159-31745178 None:intergenic 30.0%
CTTGCGTAATTATTTGTCAA+TGG - chr6_1:31745157-31745176 Msa0882430:intron 30.0%
!!! GGACAATTTTTTTCCTAAAG+GGG + chr6_1:31745434-31745453 None:intergenic 30.0%
!!! GGGACAATTTTTTTCCTAAA+GGG + chr6_1:31745435-31745454 None:intergenic 30.0%
!!! AGGGACAATTTTTTTCCTAA+AGG + chr6_1:31745436-31745455 None:intergenic 30.0%
AGTTACCACATAAATATTCG+TGG + chr6_1:31745778-31745797 None:intergenic 30.0%
ATAGAGCTGTAGTTATTGTA+AGG - chr6_1:31745972-31745991 Msa0882430:CDS 30.0%
TATACACATCATCTAATGAC+GGG + chr6_1:31746124-31746143 None:intergenic 30.0%
CTATACACATCATCTAATGA+CGG + chr6_1:31746125-31746144 None:intergenic 30.0%
! GAAAATGTATGGGTTGTGTT+TGG + chr6_1:31735642-31735661 None:intergenic 35.0%
CTTTCTCTCTCTAGATTGAA+GGG + chr6_1:31735714-31735733 None:intergenic 35.0%
CTCACAACCTATTTCAGTTA+CGG - chr6_1:31735860-31735879 Msa0882430:three_prime_UTR 35.0%
TCTTCCGAAAAATCTTTGAC+TGG - chr6_1:31735915-31735934 Msa0882430:exon 35.0%
! TGCACCAGTCAAAGATTTTT+CGG + chr6_1:31735922-31735941 None:intergenic 35.0%
TGAAGGAACCTGAAGATTAT+TGG + chr6_1:31735948-31735967 None:intergenic 35.0%
!! TGAATAAGCGTGTTTTTGCA+GGG - chr6_1:31736183-31736202 Msa0882430:intron 35.0%
TCTTCAAGTCCTAAACAGAT+CGG + chr6_1:31736216-31736235 None:intergenic 35.0%
AAATGACAAGAGAGTGAGTT+GGG - chr6_1:31736390-31736409 Msa0882430:intron 35.0%
GTTTGGAAACACGTTATTTG+TGG - chr6_1:31736811-31736830 Msa0882430:CDS 35.0%
AATTGTTACACGATGGAACT+AGG - chr6_1:31736907-31736926 Msa0882430:intron 35.0%
GATCAGAGTTTATAAAGAGG+AGG - chr6_1:31737211-31737230 Msa0882430:intron 35.0%
CTAACTCATCCTTACAAAAC+TGG + chr6_1:31737255-31737274 None:intergenic 35.0%
!! CAGTTTTGTAAGGATGAGTT+AGG - chr6_1:31737253-31737272 Msa0882430:intron 35.0%
GCCAATCCAAATGTGTATAA+AGG - chr6_1:31737649-31737668 Msa0882430:intron 35.0%
!! TTTTGATTGGGAGAAGATTG+TGG - chr6_1:31737756-31737775 Msa0882430:intron 35.0%
AGGAGACAAAAATCCTATCT+TGG - chr6_1:31737779-31737798 Msa0882430:intron 35.0%
TTCCATAACACCAAATCAAG+AGG - chr6_1:31737806-31737825 Msa0882430:intron 35.0%
!! ATCCTCTTGATTTGGTGTTA+TGG + chr6_1:31737811-31737830 None:intergenic 35.0%
TCGTTTATGCAATGAATCAG+TGG - chr6_1:31737831-31737850 Msa0882430:intron 35.0%
TTAAGCGATGAGTAGTTATC+CGG - chr6_1:31737888-31737907 Msa0882430:intron 35.0%
! TGATACGCAGCATCATATTT+TGG + chr6_1:31737992-31738011 None:intergenic 35.0%
! ACTGCATAATTTGCAGGTTT+CGG + chr6_1:31738337-31738356 None:intergenic 35.0%
TGATATGCAATATTATGGGG+CGG - chr6_1:31738363-31738382 Msa0882430:intron 35.0%
TTCTGCTTTATCCCATCATT+TGG - chr6_1:31738513-31738532 Msa0882430:intron 35.0%
TCTGCTTTATCCCATCATTT+GGG - chr6_1:31738514-31738533 Msa0882430:intron 35.0%
! GAAAAAGGAGTACATTTCCT+TGG - chr6_1:31738642-31738661 Msa0882430:intron 35.0%
TCTATGATGAATTCAGGATC+TGG - chr6_1:31738906-31738925 Msa0882430:intron 35.0%
AGTGCAATGTTATTCCTAAC+TGG + chr6_1:31739056-31739075 None:intergenic 35.0%
ACAACAATCCCCTTTATTCA+AGG - chr6_1:31739089-31739108 Msa0882430:intron 35.0%
AACCACATCCTTGAATAAAG+GGG + chr6_1:31739100-31739119 None:intergenic 35.0%
AGTAAGGTATAGACTTTGGA+GGG + chr6_1:31739489-31739508 None:intergenic 35.0%
TTGGAGTAAGGTATAGACTT+TGG + chr6_1:31739493-31739512 None:intergenic 35.0%
CAGATAAGGTTGAATCATTC+GGG - chr6_1:31739698-31739717 Msa0882430:intron 35.0%
ACTCTCCAAAAATCCTTAAG+AGG + chr6_1:31739812-31739831 None:intergenic 35.0%
!! ATTTTTGGAGAGTTAACACC+AGG - chr6_1:31739819-31739838 Msa0882430:intron 35.0%
!! TTTTTGGAGAGTTAACACCA+GGG - chr6_1:31739820-31739839 Msa0882430:intron 35.0%
!!! AATTTTTGGCAGGACTGTTT+TGG - chr6_1:31739902-31739921 Msa0882430:intron 35.0%
!!! ATTTTTGGCAGGACTGTTTT+GGG - chr6_1:31739903-31739922 Msa0882430:intron 35.0%
!!! ATTTTTTTGTGTTAGGGGAG+TGG - chr6_1:31740051-31740070 Msa0882430:intron 35.0%
!!! TTTTTTTGTGTTAGGGGAGT+GGG - chr6_1:31740052-31740071 Msa0882430:intron 35.0%
!! AAGACATCGACTTACTTTAC+TGG + chr6_1:31740198-31740217 None:intergenic 35.0%
AGTAAGTCGATGTCTTAACT+TGG - chr6_1:31740202-31740221 Msa0882430:intron 35.0%
GTAAGTCGATGTCTTAACTT+GGG - chr6_1:31740203-31740222 Msa0882430:intron 35.0%
!!! TAACTATCTTGGTTTTGCTG+CGG - chr6_1:31740232-31740251 Msa0882430:intron 35.0%
TTCAATGTATCAATCACTCG+AGG + chr6_1:31740275-31740294 None:intergenic 35.0%
AGCATCTAATCTATCAAGAG+GGG + chr6_1:31740588-31740607 None:intergenic 35.0%
! CACCATTAACAATTGAGTTG+TGG + chr6_1:31740678-31740697 None:intergenic 35.0%
AATTGGTATCACAATACGTG+GGG - chr6_1:31740941-31740960 Msa0882430:intron 35.0%
CTGAAAAAACGCAATCCAAT+AGG + chr6_1:31741277-31741296 None:intergenic 35.0%
TTACGAGAACAAATTGCTGA+GGG - chr6_1:31741397-31741416 Msa0882430:intron 35.0%
! GAAGATAATGGTTATTGTGG+AGG - chr6_1:31741447-31741466 Msa0882430:intron 35.0%
! AGATAATGGTTATTGTGGAG+GGG - chr6_1:31741449-31741468 Msa0882430:intron 35.0%
GTGAAAAGTCTATACAAGTG+AGG - chr6_1:31741648-31741667 Msa0882430:intron 35.0%
AAAAGTCTAGTTGAGTGAAC+AGG - chr6_1:31741885-31741904 Msa0882430:CDS 35.0%
TTGAGTGAACAGGAATTTGA+GGG - chr6_1:31741895-31741914 Msa0882430:CDS 35.0%
! GGAAAGGGTGTATTAAATGA+AGG + chr6_1:31741940-31741959 None:intergenic 35.0%
TAGTAAGAAGGTAAGGGAAA+GGG + chr6_1:31741955-31741974 None:intergenic 35.0%
ATAGTAAGAAGGTAAGGGAA+AGG + chr6_1:31741956-31741975 None:intergenic 35.0%
ACCTGATAGTAAGAAGGTAA+GGG + chr6_1:31741961-31741980 None:intergenic 35.0%
TACCTGATAGTAAGAAGGTA+AGG + chr6_1:31741962-31741981 None:intergenic 35.0%
AAGAGAACCTGATAGTAAGA+AGG + chr6_1:31742204-31742223 None:intergenic 35.0%
ACCAAATCATTTGGATCATG+TGG - chr6_1:31742389-31742408 Msa0882430:intron 35.0%
TCCACATGATCCAAATGATT+TGG + chr6_1:31742393-31742412 None:intergenic 35.0%
AAATCATTTGGATCATGTGG+AGG - chr6_1:31742392-31742411 Msa0882430:intron 35.0%
AGGTTATATTGCAGGATCTA+AGG - chr6_1:31742412-31742431 Msa0882430:intron 35.0%
ACCGAAAGGAGAATATAGTA+TGG + chr6_1:31742519-31742538 None:intergenic 35.0%
TCTCCTTTCGGTTAAAAATC+TGG - chr6_1:31742527-31742546 Msa0882430:intron 35.0%
TGTATGAAGAGAAAAGTGAC+TGG - chr6_1:31742571-31742590 Msa0882430:intron 35.0%
! GTTAGTTTCTTATAGGTAGC+TGG - chr6_1:31742625-31742644 Msa0882430:intron 35.0%
! TATCTGTACTCTTTTGTGGA+TGG - chr6_1:31742702-31742721 Msa0882430:intron 35.0%
! ATCTGTACTCTTTTGTGGAT+GGG - chr6_1:31742703-31742722 Msa0882430:intron 35.0%
GCAGGGCTACAAAAAATTAA+GGG + chr6_1:31742735-31742754 None:intergenic 35.0%
TGCAGGGCTACAAAAAATTA+AGG + chr6_1:31742736-31742755 None:intergenic 35.0%
!! ATTTTGGAGATGATTGGCAA+GGG + chr6_1:31742762-31742781 None:intergenic 35.0%
CGATCAACAGTTTCTACATA+TGG + chr6_1:31742843-31742862 None:intergenic 35.0%
TAGAAACTGTTGATCGTAGA+AGG - chr6_1:31742847-31742866 Msa0882430:intron 35.0%
AGAAACTGTTGATCGTAGAA+GGG - chr6_1:31742848-31742867 Msa0882430:intron 35.0%
AAGGAAAATGAATATGGCAG+AGG - chr6_1:31742905-31742924 Msa0882430:intron 35.0%
AGGAAAATGAATATGGCAGA+GGG - chr6_1:31742906-31742925 Msa0882430:intron 35.0%
AAGAATACATAGACCTGAGT+TGG - chr6_1:31742929-31742948 Msa0882430:intron 35.0%
AGAATACATAGACCTGAGTT+GGG - chr6_1:31742930-31742949 Msa0882430:intron 35.0%
ACAGGTCATAATCTCAAACA+TGG + chr6_1:31743053-31743072 None:intergenic 35.0%
GAGATTATGACCTGTGTAAT+CGG - chr6_1:31743058-31743077 Msa0882430:intron 35.0%
GTATAGGCATGTGATCATTT+AGG - chr6_1:31743206-31743225 Msa0882430:intron 35.0%
CATGTGATCATTTAGGCAAT+TGG - chr6_1:31743213-31743232 Msa0882430:intron 35.0%
AAATATGTTGTATGGGTCCT+AGG + chr6_1:31743326-31743345 None:intergenic 35.0%
! AGAATCAAGGTATTCCTTGA+GGG + chr6_1:31743391-31743410 None:intergenic 35.0%
! AAGAATCAAGGTATTCCTTG+AGG + chr6_1:31743392-31743411 None:intergenic 35.0%
GAAACAGAAGAAAACTGTGA+AGG + chr6_1:31743429-31743448 None:intergenic 35.0%
!! CACAGTTTTCTTCTGTTTCT+TGG - chr6_1:31743430-31743449 Msa0882430:intron 35.0%
! TCTTGTCATTTGAGAGGATT+AGG - chr6_1:31743590-31743609 Msa0882430:intron 35.0%
! CTTGTCATTTGAGAGGATTA+GGG - chr6_1:31743591-31743610 Msa0882430:intron 35.0%
CAAACAATAGTAGCACTTCA+AGG + chr6_1:31743644-31743663 None:intergenic 35.0%
! CCCCCACTATTTAAAATCTA+TGG - chr6_1:31744069-31744088 Msa0882430:intron 35.0%
TGCATAATATATGCAAGGTC+TGG - chr6_1:31744131-31744150 Msa0882430:intron 35.0%
GCATAATATATGCAAGGTCT+GGG - chr6_1:31744132-31744151 Msa0882430:intron 35.0%
CATAATATATGCAAGGTCTG+GGG - chr6_1:31744133-31744152 Msa0882430:intron 35.0%
!!! TATTTTTTATGTGGTGTCCG+GGG + chr6_1:31744165-31744184 None:intergenic 35.0%
! TTTTTATGGTGAGTGCAAAC+TGG + chr6_1:31744348-31744367 None:intergenic 35.0%
AAGTTGCATAAAGATGTGCA+GGG + chr6_1:31744471-31744490 None:intergenic 35.0%
!! TATTATTTGTTGTGCAGCTG+GGG + chr6_1:31744503-31744522 None:intergenic 35.0%
!! GATATTATTTGTTGTGCAGC+TGG + chr6_1:31744505-31744524 None:intergenic 35.0%
AAAGTTATTCTTGGCGAAGA+TGG - chr6_1:31744532-31744551 Msa0882430:intron 35.0%
GCATTGCATAAGTTGTTGAT+TGG - chr6_1:31744593-31744612 Msa0882430:intron 35.0%
! AAGATGGGATTTGAAGTTCT+TGG - chr6_1:31744755-31744774 Msa0882430:intron 35.0%
! AGATGGGATTTGAAGTTCTT+GGG - chr6_1:31744756-31744775 Msa0882430:intron 35.0%
TAAAGCATGATTGGCATTAC+AGG + chr6_1:31744794-31744813 None:intergenic 35.0%
CATATCAGCTTCTCATTCAA+GGG - chr6_1:31745025-31745044 Msa0882430:intron 35.0%
ATTCAAAATACACACCTGCA+AGG + chr6_1:31745066-31745085 None:intergenic 35.0%
! ATATTTTCTATTCTACCCCC+TGG - chr6_1:31745383-31745402 Msa0882430:intron 35.0%
TTAGGTAGTACAATCTACCA+GGG + chr6_1:31745403-31745422 None:intergenic 35.0%
ATTAGGTAGTACAATCTACC+AGG + chr6_1:31745404-31745423 None:intergenic 35.0%
CCTAAAGGGGACTTATAATT+AGG + chr6_1:31745421-31745440 None:intergenic 35.0%
CCTAATTATAAGTCCCCTTT+AGG - chr6_1:31745418-31745437 Msa0882430:intron 35.0%
TTGGACACTTCTATACACAA+AGG - chr6_1:31745542-31745561 Msa0882430:intron 35.0%
TCACTGTTTATAAGCTCCTT+TGG + chr6_1:31745657-31745676 None:intergenic 35.0%
AAGGAGCTTATAAACAGTGA+TGG - chr6_1:31745657-31745676 Msa0882430:intron 35.0%
AAGACATCCTTCAAGGATAT+TGG + chr6_1:31745740-31745759 None:intergenic 35.0%
ACTCAAAAAGACATCCTTCA+AGG + chr6_1:31745747-31745766 None:intergenic 35.0%
!! GTAAGGCATTTTTGAATCCA+TGG - chr6_1:31745989-31746008 Msa0882430:CDS 35.0%
! CAGTTAGTTTGAAATCACCA+TGG + chr6_1:31746009-31746028 None:intergenic 35.0%
CATGGTGATTTCAAACTAAC+TGG - chr6_1:31746007-31746026 Msa0882430:exon 35.0%
ATACACATCATCTAATGACG+GGG + chr6_1:31746123-31746142 None:intergenic 35.0%
TGGCTGGAGATGATTCAAAT+GGG + chr6_1:31735622-31735641 None:intergenic 40.0%
TTGGCTGGAGATGATTCAAA+TGG + chr6_1:31735623-31735642 None:intergenic 40.0%
TCTCTCTAGATTGAAGGGAA+GGG + chr6_1:31735709-31735728 None:intergenic 40.0%
GCTTTCTCTCTCTAGATTGA+AGG + chr6_1:31735715-31735734 None:intergenic 40.0%
GAGCAAACCGTAACTGAAAT+AGG + chr6_1:31735870-31735889 None:intergenic 40.0%
GTGCAGTTCCAATAATCTTC+AGG - chr6_1:31735937-31735956 Msa0882430:CDS 40.0%
!! CTGAATAAGCGTGTTTTTGC+AGG - chr6_1:31736182-31736201 Msa0882430:intron 40.0%
GAAATGACAAGAGAGTGAGT+TGG - chr6_1:31736389-31736408 Msa0882430:intron 40.0%
AATGACAAGAGAGTGAGTTG+GGG - chr6_1:31736391-31736410 Msa0882430:intron 40.0%
! GACCTGTGGATTATGTAGTA+AGG - chr6_1:31736476-31736495 Msa0882430:intron 40.0%
CTCCTTACTACATAATCCAC+AGG + chr6_1:31736481-31736500 None:intergenic 40.0%
!! GTAGTAAGGAGAGTATCAGA+TGG - chr6_1:31736490-31736509 Msa0882430:intron 40.0%
!! TAAGGAGAGTATCAGATGGA+GGG - chr6_1:31736494-31736513 Msa0882430:intron 40.0%
GAAGTCATATCCCACTAAGT+GGG + chr6_1:31736632-31736651 None:intergenic 40.0%
!! CCTTACAAAACTGGCTTGTA+AGG + chr6_1:31737246-31737265 None:intergenic 40.0%
!! CCTTACAAGCCAGTTTTGTA+AGG - chr6_1:31737243-31737262 Msa0882430:intron 40.0%
ACACATCAACTTCTGCAATG+TGG + chr6_1:31737933-31737952 None:intergenic 40.0%
!! GAAGTTGATGTGTTTGAACC+TGG - chr6_1:31737940-31737959 Msa0882430:intron 40.0%
ATTTACATACGCAGCTTCTG+TGG - chr6_1:31738236-31738255 Msa0882430:intron 40.0%
TTTACATACGCAGCTTCTGT+GGG - chr6_1:31738237-31738256 Msa0882430:intron 40.0%
AAACAAATCGAAGCTACGAC+TGG + chr6_1:31738278-31738297 None:intergenic 40.0%
! CCACATACTGCATAATTTGC+AGG + chr6_1:31738343-31738362 None:intergenic 40.0%
CCTGCAAATTATGCAGTATG+TGG - chr6_1:31738340-31738359 Msa0882430:intron 40.0%
!! GTACATAGAAGTATCCTGAC+CGG + chr6_1:31738407-31738426 None:intergenic 40.0%
!! TGGCTATACGTTGCTAGTTT+TGG - chr6_1:31738432-31738451 Msa0882430:intron 40.0%
AGAGCTGAAACCCAAATGAT+GGG + chr6_1:31738527-31738546 None:intergenic 40.0%
TAGAGCTGAAACCCAAATGA+TGG + chr6_1:31738528-31738547 None:intergenic 40.0%
GATTGCAACTCAAACCAGTT+AGG - chr6_1:31739039-31739058 Msa0882430:intron 40.0%
ATCCCCTTTATTCAAGGATG+TGG - chr6_1:31739095-31739114 Msa0882430:intron 40.0%
GGTTAAACCACCATCTAAGA+TGG - chr6_1:31739116-31739135 Msa0882430:intron 40.0%
TGGTTTACCATCTTAGATGG+TGG + chr6_1:31739126-31739145 None:intergenic 40.0%
GCAACGTTCTCATTCTACAA+AGG - chr6_1:31739243-31739262 Msa0882430:intron 40.0%
AACCTTGCATTAGAACTGCA+AGG + chr6_1:31739326-31739345 None:intergenic 40.0%
GAGTAAGGTATAGACTTTGG+AGG + chr6_1:31739490-31739509 None:intergenic 40.0%
AAATGAGGATCTATGGCTAG+TGG + chr6_1:31739581-31739600 None:intergenic 40.0%
GCGGTTAATAGCTTCAGATA+AGG - chr6_1:31739684-31739703 Msa0882430:intron 40.0%
ATAAGGTTGAATCATTCGGG+CGG - chr6_1:31739701-31739720 Msa0882430:intron 40.0%
GTTAGACCTCTTTCCTCTTA+AGG - chr6_1:31739796-31739815 Msa0882430:intron 40.0%
ACTACATCAAACCAAGCATC+AGG + chr6_1:31739947-31739966 None:intergenic 40.0%
!!! TTTTTTGTGTTAGGGGAGTG+GGG - chr6_1:31740053-31740072 Msa0882430:intron 40.0%
CCTATTGGAGAATCCACATT+TGG + chr6_1:31740417-31740436 None:intergenic 40.0%
CCAAATGTGGATTCTCCAAT+AGG - chr6_1:31740414-31740433 Msa0882430:CDS 40.0%
GACAGCACTTCACAATGAAT+TGG - chr6_1:31740440-31740459 Msa0882430:CDS 40.0%
AGCACTTCACAATGAATTGG+AGG - chr6_1:31740443-31740462 Msa0882430:CDS 40.0%
TGTTAAAAAGCCAGCTGCTT+TGG - chr6_1:31740482-31740501 Msa0882430:intron 40.0%
ATTCCAAAAACCAAAGCAGC+TGG + chr6_1:31740495-31740514 None:intergenic 40.0%
!!! AGCTGCTTTGGTTTTTGGAA+TGG - chr6_1:31740494-31740513 Msa0882430:intron 40.0%
!!! GCTGCTTTGGTTTTTGGAAT+GGG - chr6_1:31740495-31740514 Msa0882430:intron 40.0%
GACAAACTCTGCTATTCTTC+CGG - chr6_1:31740524-31740543 Msa0882430:intron 40.0%
ACTCAATTGTTAATGGTGCG+CGG - chr6_1:31740680-31740699 Msa0882430:intron 40.0%
CTTATTCTGGTAACCAGCAA+AGG + chr6_1:31740750-31740769 None:intergenic 40.0%
ATTGGTATCACAATACGTGG+GGG - chr6_1:31740942-31740961 Msa0882430:intron 40.0%
! AGATTGGTTGTAGATGATGG+TGG - chr6_1:31741070-31741089 Msa0882430:intron 40.0%
TGATGTACTTTGCTGCCTAT+TGG - chr6_1:31741259-31741278 Msa0882430:intron 40.0%
AACACTTCTTCTAGATGTGC+TGG + chr6_1:31741379-31741398 None:intergenic 40.0%
GTTACGAGAACAAATTGCTG+AGG - chr6_1:31741396-31741415 Msa0882430:intron 40.0%
TTGCATATAGCTATGACCTC+TGG + chr6_1:31741508-31741527 None:intergenic 40.0%
! ATGCGGATACACAATTTTCC+TGG + chr6_1:31741731-31741750 None:intergenic 40.0%
GTTGAGTGAACAGGAATTTG+AGG - chr6_1:31741894-31741913 Msa0882430:CDS 40.0%
AAGGAATACCTCCAGTATTG+TGG + chr6_1:31741921-31741940 None:intergenic 40.0%
TCCCTTACCTTCTTACTATC+AGG - chr6_1:31741957-31741976 Msa0882430:intron 40.0%
TTAAGTGAACGGGAATGAGA+GGG - chr6_1:31742099-31742118 Msa0882430:intron 40.0%
! CGAAACAGGGCATTAAATGA+TGG + chr6_1:31742144-31742163 None:intergenic 40.0%
CTTCTGAGCAGACATCTAAT+TGG - chr6_1:31742164-31742183 Msa0882430:intron 40.0%
GGGACATTCACCAAATCATT+TGG - chr6_1:31742380-31742399 Msa0882430:intron 40.0%
TCATGTGGAGGTTATATTGC+AGG - chr6_1:31742404-31742423 Msa0882430:intron 40.0%
GAAAAGTGACTGGACCTATA+TGG - chr6_1:31742581-31742600 Msa0882430:intron 40.0%
TGACTGGACCTATATGGTAT+GGG - chr6_1:31742587-31742606 Msa0882430:intron 40.0%
AATTCCCTCCCATACCATAT+AGG + chr6_1:31742598-31742617 None:intergenic 40.0%
GTAGCTGGACTGAAACATAT+AGG - chr6_1:31742640-31742659 Msa0882430:intron 40.0%
!! CATTTTGGAGATGATTGGCA+AGG + chr6_1:31742763-31742782 None:intergenic 40.0%
CTTGCCAATCATCTCCAAAA+TGG - chr6_1:31742761-31742780 Msa0882430:intron 40.0%
! ATAGACCTGAGTTGGGAATT+GGG - chr6_1:31742937-31742956 Msa0882430:intron 40.0%
TATGACCTGTGTAATCGGTA+AGG - chr6_1:31743063-31743082 Msa0882430:intron 40.0%
ATGACCTGTGTAATCGGTAA+GGG - chr6_1:31743064-31743083 Msa0882430:intron 40.0%
AACAGAAAATAGCCTCACTG+AGG + chr6_1:31743090-31743109 None:intergenic 40.0%
GTGACAACATAGATCACTCT+CGG + chr6_1:31743184-31743203 None:intergenic 40.0%
TCTAGTCTCTCGAATACTCT+TGG - chr6_1:31743241-31743260 Msa0882430:intron 40.0%
GGGTATGTTGAGAGATAGTT+AGG - chr6_1:31743515-31743534 Msa0882430:intron 40.0%
GAGAGATAGTTAGGCCAATA+AGG - chr6_1:31743524-31743543 Msa0882430:intron 40.0%
TTATTGGCAGCATGCCTTAT+TGG + chr6_1:31743541-31743560 None:intergenic 40.0%
CATGCTGCCAATAAATAGAG+AGG - chr6_1:31743547-31743566 Msa0882430:intron 40.0%
ATAGAGAGGAGTGATTAGAG+AGG - chr6_1:31743561-31743580 Msa0882430:intron 40.0%
TAGAGAGGAGTGATTAGAGA+GGG - chr6_1:31743562-31743581 Msa0882430:intron 40.0%
! GCATCATCTTGTCATTTGAG+AGG - chr6_1:31743584-31743603 Msa0882430:intron 40.0%
CATGATGTGATAGAACCAAG+TGG + chr6_1:31743708-31743727 None:intergenic 40.0%
! TACACCACGAGCTTTATAGA+AGG + chr6_1:31743792-31743811 None:intergenic 40.0%
ATGCTGAATTAGTGTGCTCT+TGG - chr6_1:31744262-31744281 Msa0882430:intron 40.0%
GAAGTTGCATAAAGATGTGC+AGG + chr6_1:31744472-31744491 None:intergenic 40.0%
!! ATTATTTGTTGTGCAGCTGG+GGG + chr6_1:31744502-31744521 None:intergenic 40.0%
TCGGATCTTTGCAAGTTTCT+GGG + chr6_1:31744702-31744721 None:intergenic 40.0%
AGGTCAGAATTGCAGAAGAT+GGG - chr6_1:31744740-31744759 Msa0882430:intron 40.0%
! GATGGGATTTGAAGTTCTTG+GGG - chr6_1:31744757-31744776 Msa0882430:intron 40.0%
TTAACTGAGATCCGTGATGT+AGG + chr6_1:31744912-31744931 None:intergenic 40.0%
GCATATCAGCTTCTCATTCA+AGG - chr6_1:31745024-31745043 Msa0882430:intron 40.0%
TAGGTAGTACAATCTACCAG+GGG + chr6_1:31745402-31745421 None:intergenic 40.0%
GTTTGTGCCAATATCCTTGA+AGG - chr6_1:31745730-31745749 Msa0882430:intron 40.0%
CGCTTCCACGAATATTTATG+TGG - chr6_1:31745770-31745789 Msa0882430:intron 40.0%
TGTTTGTGCTTTCCTTTCGT+AGG - chr6_1:31745803-31745822 Msa0882430:intron 40.0%
CACTGCTAATAACCTACGAA+AGG + chr6_1:31745818-31745837 None:intergenic 40.0%
TCGTAGGTTATTAGCAGTGT+AGG - chr6_1:31745819-31745838 Msa0882430:intron 40.0%
AGCAGTGTAGGTGATCTAAT+TGG - chr6_1:31745831-31745850 Msa0882430:intron 40.0%
!! TCTTGTTGTTGTTGCTTCGT+TGG + chr6_1:31745879-31745898 None:intergenic 40.0%
ACGAAGCAACAACAACAAGA+TGG - chr6_1:31745879-31745898 Msa0882430:intron 40.0%
! ATGTATGGGTTGTGTTTGGC+TGG + chr6_1:31735638-31735657 None:intergenic 45.0%
CTAGATTGAAGGGAAGGGAA+GGG + chr6_1:31735704-31735723 None:intergenic 45.0%
TCTAGATTGAAGGGAAGGGA+AGG + chr6_1:31735705-31735724 None:intergenic 45.0%
CTCTCTCTAGATTGAAGGGA+AGG + chr6_1:31735710-31735729 None:intergenic 45.0%
GTTGTGAGTGCAGTGAGATA+CGG + chr6_1:31735848-31735867 None:intergenic 45.0%
! TACGGTTTGCTCTTCGCTTT+CGG - chr6_1:31735878-31735897 Msa0882430:three_prime_UTR 45.0%
GATTGAACTGAATAAGCGCG+TGG - chr6_1:31736010-31736029 Msa0882430:intron 45.0%
! GGTTATGCACCGATCTGTTT+AGG - chr6_1:31736204-31736223 Msa0882430:intron 45.0%
GGATGTGCGGTAATACTAGA+CGG - chr6_1:31736356-31736375 Msa0882430:intron 45.0%
ACATGTAGAGAGAAGACCTG+TGG - chr6_1:31736462-31736481 Msa0882430:intron 45.0%
!! GTAAGGAGAGTATCAGATGG+AGG - chr6_1:31736493-31736512 Msa0882430:intron 45.0%
!! AAGGAGAGTATCAGATGGAG+GGG - chr6_1:31736495-31736514 Msa0882430:intron 45.0%
AGGGGAGTCAAATCACTAGA+GGG - chr6_1:31736513-31736532 Msa0882430:intron 45.0%
AGTCAAATCACTAGAGGGAG+AGG - chr6_1:31736518-31736537 Msa0882430:intron 45.0%
CGAAGTCATATCCCACTAAG+TGG + chr6_1:31736633-31736652 None:intergenic 45.0%
CTTAGTGGGATATGACTTCG+TGG - chr6_1:31736633-31736652 Msa0882430:intron 45.0%
TGATGGAACTAGGCTCTGTA+TGG - chr6_1:31736708-31736727 Msa0882430:intron 45.0%
! TAGTCCCACATCGGTTAGAT+AGG - chr6_1:31737182-31737201 Msa0882430:intron 45.0%
GCTTCCTATCTAACCGATGT+GGG + chr6_1:31737189-31737208 None:intergenic 45.0%
AGCTTCCTATCTAACCGATG+TGG + chr6_1:31737190-31737209 None:intergenic 45.0%
!! CAAAACTGGCTTGTAAGGTG+AGG + chr6_1:31737241-31737260 None:intergenic 45.0%
TGATTGGGAGAAGATTGTGG+AGG - chr6_1:31737759-31737778 Msa0882430:intron 45.0%
TGAGAACCCTTTGAGCTGTT+TGG - chr6_1:31737856-31737875 Msa0882430:intron 45.0%
GAGAACCCTTTGAGCTGTTT+GGG - chr6_1:31737857-31737876 Msa0882430:intron 45.0%
AGAACCCTTTGAGCTGTTTG+GGG - chr6_1:31737858-31737877 Msa0882430:intron 45.0%
CTATCCCCAAACAGCTCAAA+GGG + chr6_1:31737865-31737884 None:intergenic 45.0%
ACTATCCCCAAACAGCTCAA+AGG + chr6_1:31737866-31737885 None:intergenic 45.0%
GTTGATGTGTTTGAACCTGG+AGG - chr6_1:31737943-31737962 Msa0882430:intron 45.0%
TGCGTATCAGTATGTCTGCA+GGG - chr6_1:31738003-31738022 Msa0882430:intron 45.0%
CTGTGTGTGTTCTCTGTAGT+GGG - chr6_1:31738063-31738082 Msa0882430:intron 45.0%
CCATATTCTATGTTGGGGAG+AGG + chr6_1:31738139-31738158 None:intergenic 45.0%
CCTCTCCCCAACATAGAATA+TGG - chr6_1:31738136-31738155 Msa0882430:intron 45.0%
CTGCGTATGTAAATGTCCAG+AGG + chr6_1:31738230-31738249 None:intergenic 45.0%
CTTAAGATCCCCACACAACA+GGG + chr6_1:31738460-31738479 None:intergenic 45.0%
ACTTAAGATCCCCACACAAC+AGG + chr6_1:31738461-31738480 None:intergenic 45.0%
! AGCCTTGCAGTTCTAATGCA+AGG - chr6_1:31739321-31739340 Msa0882430:intron 45.0%
! TAGACTTTGGAGGGATGCAT+TGG + chr6_1:31739480-31739499 None:intergenic 45.0%
CCTATGACAAGCTTGGAGTA+AGG + chr6_1:31739505-31739524 None:intergenic 45.0%
CCTTACTCCAAGCTTGTCAT+AGG - chr6_1:31739502-31739521 Msa0882430:CDS 45.0%
CCAGTTACCTATGACAAGCT+TGG + chr6_1:31739512-31739531 None:intergenic 45.0%
CCAAGCTTGTCATAGGTAAC+TGG - chr6_1:31739509-31739528 Msa0882430:CDS 45.0%
!! GCATCAGGAGCACTTGATAT+TGG + chr6_1:31739932-31739951 None:intergenic 45.0%
TATCAAGTGCTCCTGATGCT+TGG - chr6_1:31739933-31739952 Msa0882430:intron 45.0%
!!! AAGCCAGCTGCTTTGGTTTT+TGG - chr6_1:31740489-31740508 Msa0882430:intron 45.0%
TGCTATTCTTCCGGTCTTGA+TGG - chr6_1:31740533-31740552 Msa0882430:intron 45.0%
GCTATTCTTCCGGTCTTGAT+GGG - chr6_1:31740534-31740553 Msa0882430:intron 45.0%
CTATTCTTCCGGTCTTGATG+GGG - chr6_1:31740535-31740554 Msa0882430:intron 45.0%
!! TGGGGAAGGTTGGTAACATT+TGG - chr6_1:31740553-31740572 Msa0882430:intron 45.0%
CTCAATTGTTAATGGTGCGC+GGG - chr6_1:31740681-31740700 Msa0882430:intron 45.0%
TCAATTGTTAATGGTGCGCG+GGG - chr6_1:31740682-31740701 Msa0882430:intron 45.0%
TCTACGTGTCAAGTGCTACA+TGG + chr6_1:31740897-31740916 None:intergenic 45.0%
CGTGGGGGAAAGAAATTTGA+AGG - chr6_1:31740957-31740976 Msa0882430:intron 45.0%
TAGGCCCTGGAAGAAGATAA+TGG - chr6_1:31741435-31741454 Msa0882430:intron 45.0%
AGAGCTTTGCAAACTTCCAG+AGG - chr6_1:31741489-31741508 Msa0882430:intron 45.0%
CCTGGACTCAAACCATTTAC+AGG + chr6_1:31741713-31741732 None:intergenic 45.0%
CCTGTAAATGGTTTGAGTCC+AGG - chr6_1:31741710-31741729 Msa0882430:intron 45.0%
GAATTTGAGGGCCACAATAC+TGG - chr6_1:31741907-31741926 Msa0882430:CDS 45.0%
GTTAAGTGAACGGGAATGAG+AGG - chr6_1:31742098-31742117 Msa0882430:intron 45.0%
ATGGAATACCTCCGGTATTG+TGG + chr6_1:31742125-31742144 None:intergenic 45.0%
TTGGATGAAGCACACAGCAT+TGG - chr6_1:31742284-31742303 Msa0882430:intron 45.0%
GTGACTGGACCTATATGGTA+TGG - chr6_1:31742586-31742605 Msa0882430:intron 45.0%
TGGACCTATATGGTATGGGA+GGG - chr6_1:31742591-31742610 Msa0882430:intron 45.0%
! CATAGACCTGAGTTGGGAAT+TGG - chr6_1:31742936-31742955 Msa0882430:intron 45.0%
TCTATCCCAATTCCCAACTC+AGG + chr6_1:31742945-31742964 None:intergenic 45.0%
! CTCGGCTCCCTTTTATCTAT+AGG + chr6_1:31743166-31743185 None:intergenic 45.0%
! TTGAGAGGATTAGGGCCTTT+TGG - chr6_1:31743599-31743618 Msa0882430:intron 45.0%
! GATTAGGGCCTTTTGGCATT+GGG - chr6_1:31743606-31743625 Msa0882430:intron 45.0%
TCCTACTTCCCAATGCCAAA+AGG + chr6_1:31743617-31743636 None:intergenic 45.0%
TGGTCCTTCTATAAAGCTCG+TGG - chr6_1:31743785-31743804 Msa0882430:intron 45.0%
ACCAACTGAGCTAAGCTCAT+GGG + chr6_1:31744103-31744122 None:intergenic 45.0%
TACCAACTGAGCTAAGCTCA+TGG + chr6_1:31744104-31744123 None:intergenic 45.0%
! TGAGCTTAGCTCAGTTGGTA+AGG - chr6_1:31744104-31744123 Msa0882430:intron 45.0%
AGATGGTTCAAGTCGAGGTT+TGG - chr6_1:31744549-31744568 Msa0882430:intron 45.0%
CTCGGATCTTTGCAAGTTTC+TGG + chr6_1:31744703-31744722 None:intergenic 45.0%
CAGGTCAGAATTGCAGAAGA+TGG - chr6_1:31744739-31744758 Msa0882430:intron 45.0%
GCTGGGTTGTAAAGCATGAT+TGG + chr6_1:31744803-31744822 None:intergenic 45.0%
CAAAATCCCTGCCTTCTCAA+GGG - chr6_1:31744823-31744842 Msa0882430:intron 45.0%
!! CTTGTTGATGGCCTACATCA+CGG - chr6_1:31744898-31744917 Msa0882430:intron 45.0%
TTCAAGGGAAGACCTTACCA+AGG - chr6_1:31745040-31745059 Msa0882430:intron 45.0%
AGGTAGTACAATCTACCAGG+GGG + chr6_1:31745401-31745420 None:intergenic 45.0%
TGTTGCCATCTTCGAAAGTG+AGG - chr6_1:31746042-31746061 Msa0882430:five_prime_UTR 45.0%
CAAGACCTCACTTTCGAAGA+TGG + chr6_1:31746050-31746069 None:intergenic 45.0%
CATCTTCGAAAGTGAGGTCT+TGG - chr6_1:31746048-31746067 Msa0882430:five_prime_UTR 45.0%
TTGAAGGGAAGGGAAGGGAA+GGG + chr6_1:31735699-31735718 None:intergenic 50.0%
ATTGAAGGGAAGGGAAGGGA+AGG + chr6_1:31735700-31735719 None:intergenic 50.0%
TGTGTTGCATAGCAGAGACG+AGG - chr6_1:31736335-31736354 Msa0882430:intron 50.0%
ATAGCAGAGACGAGGATGTG+CGG - chr6_1:31736343-31736362 Msa0882430:intron 50.0%
GAGGGGAGTCAAATCACTAG+AGG - chr6_1:31736512-31736531 Msa0882430:intron 50.0%
TTGTAGCCAAGCCCACTTAG+TGG - chr6_1:31736618-31736637 Msa0882430:intron 50.0%
TGTAGCCAAGCCCACTTAGT+GGG - chr6_1:31736619-31736638 Msa0882430:intron 50.0%
! CATATCCCACTAAGTGGGCT+TGG + chr6_1:31736627-31736646 None:intergenic 50.0%
TTGTTGGAAATCCCACCCTG+AGG - chr6_1:31737080-31737099 Msa0882430:CDS 50.0%
TGTTGGAAATCCCACCCTGA+GGG - chr6_1:31737081-31737100 Msa0882430:CDS 50.0%
TTACCAAACACACCCCCTCA+GGG + chr6_1:31737098-31737117 None:intergenic 50.0%
CTAGGGGCAGATCGCAATTA+AGG + chr6_1:31737126-31737145 None:intergenic 50.0%
!! TTGTGCCGGCTTGTCTTTGA+GGG - chr6_1:31737151-31737170 Msa0882430:intron 50.0%
! GGGTGGATTTAGTCCCACAT+CGG - chr6_1:31737173-31737192 Msa0882430:intron 50.0%
ATGTGTTTGAACCTGGAGGC+TGG - chr6_1:31737947-31737966 Msa0882430:intron 50.0%
CTGCGTATCAGTATGTCTGC+AGG - chr6_1:31738002-31738021 Msa0882430:intron 50.0%
GCTGTGTGTGTTCTCTGTAG+TGG - chr6_1:31738062-31738081 Msa0882430:intron 50.0%
! CCTGCACTTTGATTCGAAGC+TGG + chr6_1:31738095-31738114 None:intergenic 50.0%
CCAGCTTCGAATCAAAGTGC+AGG - chr6_1:31738092-31738111 Msa0882430:intron 50.0%
ATACGCAGCTTCTGTGGGAT+TGG - chr6_1:31738242-31738261 Msa0882430:intron 50.0%
GCTGAATTTGTCATGGGAGC+CGG - chr6_1:31738385-31738404 Msa0882430:intron 50.0%
!!! AGTTTTGGTGCCCTGTTGTG+TGG - chr6_1:31738447-31738466 Msa0882430:intron 50.0%
!!! GTTTTGGTGCCCTGTTGTGT+GGG - chr6_1:31738448-31738467 Msa0882430:intron 50.0%
!!! TTTTGGTGCCCTGTTGTGTG+GGG - chr6_1:31738449-31738468 Msa0882430:intron 50.0%
GAGGATCTATGGCTAGTGGT+TGG + chr6_1:31739577-31739596 None:intergenic 50.0%
! TGGATGGAGGTAGGTGTTGT+TGG - chr6_1:31740327-31740346 Msa0882430:CDS 50.0%
!! TGAAGTGCTGTCGTGCCTAT+TGG + chr6_1:31740432-31740451 None:intergenic 50.0%
ACAACGGTGAGTTCCTTTGC+TGG - chr6_1:31740734-31740753 Msa0882430:intron 50.0%
!! TGGTTGTAGATGATGGTGGC+AGG - chr6_1:31741074-31741093 Msa0882430:intron 50.0%
CGATGACTTCGTTTCTGCAG+AGG - chr6_1:31741153-31741172 Msa0882430:CDS 50.0%
GCACTGCATGTAGATAGCCA+AGG + chr6_1:31741357-31741376 None:intergenic 50.0%
AGGGACAGCCAAGAACACAT+AGG - chr6_1:31741416-31741435 Msa0882430:intron 50.0%
TTCCAGGGCCTATGTGTTCT+TGG + chr6_1:31741427-31741446 None:intergenic 50.0%
TGTGGAGGGGATATACAGCA+TGG - chr6_1:31741462-31741481 Msa0882430:intron 50.0%
GAGGGGATATACAGCATGGA+AGG - chr6_1:31741466-31741485 Msa0882430:intron 50.0%
TTTGAGGGCCACAATACTGG+AGG - chr6_1:31741910-31741929 Msa0882430:CDS 50.0%
GAATGAGAGGGCCACAATAC+CGG - chr6_1:31742111-31742130 Msa0882430:intron 50.0%
GTCTGCTCAGAAGCGAAACA+GGG + chr6_1:31742157-31742176 None:intergenic 50.0%
TGTCTGCTCAGAAGCGAAAC+AGG + chr6_1:31742158-31742177 None:intergenic 50.0%
!! AAGGGGTGTTTGTGAGCTCT+TGG - chr6_1:31742325-31742344 Msa0882430:intron 50.0%
!! AGGGGTGTTTGTGAGCTCTT+GGG - chr6_1:31742326-31742345 Msa0882430:intron 50.0%
TGTTTGTGAGCTCTTGGGTG+TGG - chr6_1:31742331-31742350 Msa0882430:intron 50.0%
CTGGACCTATATGGTATGGG+AGG - chr6_1:31742590-31742609 Msa0882430:intron 50.0%
TGATTGGCAAGGGACTTGCA+GGG + chr6_1:31742752-31742771 None:intergenic 50.0%
ATGATTGGCAAGGGACTTGC+AGG + chr6_1:31742753-31742772 None:intergenic 50.0%
TGATCGTAGAAGGGACAGAG+TGG - chr6_1:31742857-31742876 Msa0882430:intron 50.0%
TAGAAGGGACAGAGTGGATC+AGG - chr6_1:31742863-31742882 Msa0882430:intron 50.0%
AGAAGGGACAGAGTGGATCA+GGG - chr6_1:31742864-31742883 Msa0882430:intron 50.0%
GCGCGTCTATTACATTTCCG+AGG + chr6_1:31743353-31743372 None:intergenic 50.0%
! GGATTAGGGCCTTTTGGCAT+TGG - chr6_1:31743605-31743624 Msa0882430:intron 50.0%
!! GCCTTTTGGCATTGGGAAGT+AGG - chr6_1:31743613-31743632 Msa0882430:intron 50.0%
CAACTGAGCTAAGCTCATGG+GGG + chr6_1:31744101-31744120 None:intergenic 50.0%
CCAACTGAGCTAAGCTCATG+GGG + chr6_1:31744102-31744121 None:intergenic 50.0%
!!! AGAAGGCAGGGATTTTGGCT+GGG + chr6_1:31744820-31744839 None:intergenic 50.0%
! CCTTGAGAAGGCAGGGATTT+TGG + chr6_1:31744825-31744844 None:intergenic 50.0%
CCAAAATCCCTGCCTTCTCA+AGG - chr6_1:31744822-31744841 Msa0882430:intron 50.0%
ATGCTCTCACATTCTGCCTG+AGG + chr6_1:31744853-31744872 None:intergenic 50.0%
CGTGATGTAGGCCATCAACA+AGG + chr6_1:31744900-31744919 None:intergenic 50.0%
TGCTCTAGCCAGTAGCAATG+GGG + chr6_1:31744997-31745016 None:intergenic 50.0%
GTGCTCTAGCCAGTAGCAAT+GGG + chr6_1:31744998-31745017 None:intergenic 50.0%
AATACACACCTGCAAGGCCT+TGG + chr6_1:31745060-31745079 None:intergenic 50.0%
!! GTTGCTTCGTTGGTTCAGCA+GGG + chr6_1:31745869-31745888 None:intergenic 50.0%
!! TGTTGCTTCGTTGGTTCAGC+AGG + chr6_1:31745870-31745889 None:intergenic 50.0%
TGAAGGGAAGGGAAGGGAAG+GGG + chr6_1:31735698-31735717 None:intergenic 55.0%
!! GAATCGCGTTGGTTCGAGAG+CGG + chr6_1:31735746-31735765 None:intergenic 55.0%
GCTCTCGAACCAACGCGATT+CGG - chr6_1:31735745-31735764 Msa0882430:three_prime_UTR 55.0%
CTCTCGAACCAACGCGATTC+GGG - chr6_1:31735746-31735765 Msa0882430:three_prime_UTR 55.0%
! GAACCAACGCGATTCGGGTT+CGG - chr6_1:31735751-31735770 Msa0882430:three_prime_UTR 55.0%
ATCGCTATCATCTTCGCCGC+CGG + chr6_1:31735824-31735843 None:intergenic 55.0%
GTTGGAAATCCCACCCTGAG+GGG - chr6_1:31737082-31737101 Msa0882430:CDS 55.0%
TTGGAAATCCCACCCTGAGG+GGG - chr6_1:31737083-31737102 Msa0882430:CDS 55.0%
CTTACCAAACACACCCCCTC+AGG + chr6_1:31737099-31737118 None:intergenic 55.0%
GGGGCAGATCGCAATTAAGG+TGG + chr6_1:31737123-31737142 None:intergenic 55.0%
AAGCCGGCACAAGGCAACTA+GGG + chr6_1:31737143-31737162 None:intergenic 55.0%
CTCAAAGACAAGCCGGCACA+AGG + chr6_1:31737152-31737171 None:intergenic 55.0%
!! CTTGTGCCGGCTTGTCTTTG+AGG - chr6_1:31737150-31737169 Msa0882430:intron 55.0%
!! TGTGCCGGCTTGTCTTTGAG+GGG - chr6_1:31737152-31737171 Msa0882430:intron 55.0%
TTGAACCTGGAGGCTGGCAT+AGG - chr6_1:31737953-31737972 Msa0882430:intron 55.0%
!! GCTTCTGTGGGATTGGTCAG+TGG - chr6_1:31738249-31738268 Msa0882430:intron 55.0%
TGGGGCGGCTGAATTTGTCA+TGG - chr6_1:31738378-31738397 Msa0882430:intron 55.0%
GGGGCGGCTGAATTTGTCAT+GGG - chr6_1:31738379-31738398 Msa0882430:intron 55.0%
ATTTGTCATGGGAGCCGGTC+AGG - chr6_1:31738390-31738409 Msa0882430:intron 55.0%
CATTCTCGGGTAGCCTCACT+AGG - chr6_1:31739289-31739308 Msa0882430:intron 55.0%
! GGCTTTGCATCGACCTAGTG+AGG + chr6_1:31739305-31739324 None:intergenic 55.0%
ACCACGGGGTTTGACTCAAG+CGG - chr6_1:31739665-31739684 Msa0882430:intron 55.0%
CTCCAAGCACTTGCAGTACC+CGG - chr6_1:31740303-31740322 Msa0882430:intron 55.0%
TCCAAGCACTTGCAGTACCC+GGG - chr6_1:31740304-31740323 Msa0882430:intron 55.0%
AACACCTACCTCCATCCACC+CGG + chr6_1:31740325-31740344 None:intergenic 55.0%
TCTTCCGGTCTTGATGGGGA+AGG - chr6_1:31740539-31740558 Msa0882430:intron 55.0%
CCAACCTTCCCCATCAAGAC+CGG + chr6_1:31740546-31740565 None:intergenic 55.0%
AGCCAAGAACACATAGGCCC+TGG - chr6_1:31741422-31741441 Msa0882430:intron 55.0%
! AGCACACAGCATTGGAGCTG+TGG - chr6_1:31742292-31742311 Msa0882430:intron 55.0%
! GCACACAGCATTGGAGCTGT+GGG - chr6_1:31742293-31742312 Msa0882430:intron 55.0%
ATTGGAGCTGTGGGCAAGAC+AGG - chr6_1:31742302-31742321 Msa0882430:intron 55.0%
AGCTGTGGGCAAGACAGGAA+GGG - chr6_1:31742307-31742326 Msa0882430:intron 55.0%
! AGTGGATCAGGGCTGGTGAA+AGG - chr6_1:31742875-31742894 Msa0882430:intron 55.0%
! GTGGATCAGGGCTGGTGAAA+GGG - chr6_1:31742876-31742895 Msa0882430:intron 55.0%
GCTGGTGAAAGGGCTTAGGA+AGG - chr6_1:31742886-31742905 Msa0882430:intron 55.0%
! GAGGCCCTTACCGATTACAC+AGG + chr6_1:31743071-31743090 None:intergenic 55.0%
AATCGGTAAGGGCCTCAGTG+AGG - chr6_1:31743075-31743094 Msa0882430:intron 55.0%
CACACACACACACACCCTCA+AGG - chr6_1:31743374-31743393 Msa0882430:intron 55.0%
CCCCATGAGCTTAGCTCAGT+TGG - chr6_1:31744099-31744118 Msa0882430:intron 55.0%
GGCGAAGATGGTTCAAGTCG+AGG - chr6_1:31744544-31744563 Msa0882430:intron 55.0%
!! GAGAAGGCAGGGATTTTGGC+TGG + chr6_1:31744821-31744840 None:intergenic 55.0%
TCCAGCAACCCCATTGCTAC+TGG - chr6_1:31744986-31745005 Msa0882430:intron 55.0%
CGTGCTCTAGCCAGTAGCAA+TGG + chr6_1:31744999-31745018 None:intergenic 55.0%
AGACCTTACCAAGGCCTTGC+AGG - chr6_1:31745049-31745068 Msa0882430:intron 55.0%
ACACCTGCAAGGCCTTGGTA+AGG + chr6_1:31745055-31745074 None:intergenic 55.0%
GATCCGAACCCGAATCGCGT+TGG + chr6_1:31735757-31735776 None:intergenic 60.0%
CAAACACACCCCCTCAGGGT+GGG + chr6_1:31737094-31737113 None:intergenic 60.0%
TGCCCCTAGTTGCCTTGTGC+CGG - chr6_1:31737137-31737156 Msa0882430:intron 60.0%
AGCCGGCACAAGGCAACTAG+GGG + chr6_1:31737142-31737161 None:intergenic 60.0%
CAAGCCGGCACAAGGCAACT+AGG + chr6_1:31737144-31737163 None:intergenic 60.0%
!! GTGCCGGCTTGTCTTTGAGG+GGG - chr6_1:31737153-31737172 Msa0882430:intron 60.0%
CCACCCCCTCAAAGACAAGC+CGG + chr6_1:31737159-31737178 None:intergenic 60.0%
ATTCGCCTATGCCAGCCTCC+AGG + chr6_1:31737961-31737980 None:intergenic 60.0%
ACCGCTTGAGTCAAACCCCG+TGG + chr6_1:31739669-31739688 None:intergenic 60.0%
! ACCCGGGTACTGCAAGTGCT+TGG + chr6_1:31740308-31740327 None:intergenic 60.0%
AAGCACTTGCAGTACCCGGG+TGG - chr6_1:31740307-31740326 Msa0882430:intron 60.0%
ACTTGCAGTACCCGGGTGGA+TGG - chr6_1:31740311-31740330 Msa0882430:intron 60.0%
ACACCTACCTCCATCCACCC+GGG + chr6_1:31740324-31740343 None:intergenic 60.0%
CCGGTCTTGATGGGGAAGGT+TGG - chr6_1:31740543-31740562 Msa0882430:intron 60.0%
GTTAATGGTGCGCGGGGATC+AGG - chr6_1:31740688-31740707 Msa0882430:intron 60.0%
TGAGAGGGCCACAATACCGG+AGG - chr6_1:31742114-31742133 Msa0882430:intron 60.0%
GAGCTGTGGGCAAGACAGGA+AGG - chr6_1:31742306-31742325 Msa0882430:intron 60.0%
GCTGTGGGCAAGACAGGAAG+GGG - chr6_1:31742308-31742327 Msa0882430:intron 60.0%
! CAGGGCTGGTGAAAGGGCTT+AGG - chr6_1:31742882-31742901 Msa0882430:intron 60.0%
! AAGGTCTGGGGTTCGAACCC+CGG - chr6_1:31744145-31744164 Msa0882430:intron 60.0%
GGCACTCCCTTGAGAAGGCA+GGG + chr6_1:31744832-31744851 None:intergenic 60.0%
AGGCACTCCCTTGAGAAGGC+AGG + chr6_1:31744833-31744852 None:intergenic 60.0%
! CCTGAGGCACTCCCTTGAGA+AGG + chr6_1:31744837-31744856 None:intergenic 60.0%
!! CCTTCTCAAGGGAGTGCCTC+AGG - chr6_1:31744834-31744853 Msa0882430:intron 60.0%
GCCAGTAGCAATGGGGTTGC+TGG + chr6_1:31744990-31745009 None:intergenic 60.0%
!! TGATGGTGGCGGTGTTGGCG+AGG + chr6_1:31735798-31735817 None:intergenic 65.0%
AACACCGCCACCATCACCGC+CGG - chr6_1:31735802-31735821 Msa0882430:three_prime_UTR 65.0%
GCTATCATCTTCGCCGCCGG+CGG + chr6_1:31735821-31735840 None:intergenic 65.0%
CCAAACACACCCCCTCAGGG+TGG + chr6_1:31737095-31737114 None:intergenic 65.0%
! CCACCCTGAGGGGGTGTGTT+TGG - chr6_1:31737092-31737111 Msa0882430:CDS 65.0%
! CCGGCTTGTCTTTGAGGGGG+TGG - chr6_1:31737156-31737175 Msa0882430:intron 65.0%
TGCAGTACCCGGGTGGATGG+AGG - chr6_1:31740314-31740333 Msa0882430:CDS 65.0%
GTACCCGGGTGGATGGAGGT+AGG - chr6_1:31740318-31740337 Msa0882430:CDS 65.0%
GGGACAGAGTGGATCAGGGC+TGG - chr6_1:31742868-31742887 Msa0882430:intron 65.0%
TGTTGGCGAGGCGGCGGTGA+GGG + chr6_1:31735786-31735805 None:intergenic 70.0%
!! TGGTGGCGGTGTTGGCGAGG+CGG + chr6_1:31735795-31735814 None:intergenic 70.0%
!! GGCGGTGATGGTGGCGGTGT+TGG + chr6_1:31735803-31735822 None:intergenic 70.0%
ATCTTCGCCGCCGGCGGTGA+TGG + chr6_1:31735815-31735834 None:intergenic 70.0%
GCGAGGCGGCGGTGAGGGAT+CGG + chr6_1:31735781-31735800 None:intergenic 75.0%
! GTGTTGGCGAGGCGGCGGTG+AGG + chr6_1:31735787-31735806 None:intergenic 75.0%
!! TGGCGGTGTTGGCGAGGCGG+CGG + chr6_1:31735792-31735811 None:intergenic 75.0%
ACCGCCACCATCACCGCCGG+CGG - chr6_1:31735805-31735824 Msa0882430:three_prime_UTR 75.0%
! TTCGCCGCCGGCGGTGATGG+TGG + chr6_1:31735812-31735831 None:intergenic 75.0%
!!! GCCGCCGGCGGTGATGGTGG+CGG + chr6_1:31735809-31735828 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 31735610 31746239 31735610 ID=Msa0882430;Name=Msa0882430
chr6_1 mRNA 31735610 31746239 31735610 ID=Msa0882430-mRNA-1;Parent=Msa0882430;Name=Msa0882430-mRNA-1;_AED=0.03;_eAED=0.03;_QI=223|1|1|1|0.90|1|12|316|490
chr6_1 exon 31735610 31736024 31735610 ID=Msa0882430-mRNA-1:exon:7851;Parent=Msa0882430-mRNA-1
chr6_1 exon 31736779 31736886 31736779 ID=Msa0882430-mRNA-1:exon:7850;Parent=Msa0882430-mRNA-1
chr6_1 exon 31736987 31737153 31736987 ID=Msa0882430-mRNA-1:exon:7849;Parent=Msa0882430-mRNA-1
chr6_1 exon 31737284 31737410 31737284 ID=Msa0882430-mRNA-1:exon:7848;Parent=Msa0882430-mRNA-1
chr6_1 exon 31739416 31739577 31739416 ID=Msa0882430-mRNA-1:exon:7847;Parent=Msa0882430-mRNA-1
chr6_1 exon 31740312 31740475 31740312 ID=Msa0882430-mRNA-1:exon:7846;Parent=Msa0882430-mRNA-1
chr6_1 exon 31741110 31741203 31741110 ID=Msa0882430-mRNA-1:exon:7845;Parent=Msa0882430-mRNA-1
chr6_1 exon 31741289 31741413 31741289 ID=Msa0882430-mRNA-1:exon:7844;Parent=Msa0882430-mRNA-1
chr6_1 exon 31741514 31741659 31741514 ID=Msa0882430-mRNA-1:exon:7843;Parent=Msa0882430-mRNA-1
chr6_1 exon 31741847 31741935 31741847 ID=Msa0882430-mRNA-1:exon:7842;Parent=Msa0882430-mRNA-1
chr6_1 exon 31745580 31745645 31745580 ID=Msa0882430-mRNA-1:exon:7841;Parent=Msa0882430-mRNA-1
chr6_1 exon 31745891 31746239 31745891 ID=Msa0882430-mRNA-1:exon:7840;Parent=Msa0882430-mRNA-1
chr6_1 five_prime_UTR 31746017 31746239 31746017 ID=Msa0882430-mRNA-1:five_prime_utr;Parent=Msa0882430-mRNA-1
chr6_1 CDS 31745891 31746016 31745891 ID=Msa0882430-mRNA-1:cds;Parent=Msa0882430-mRNA-1
chr6_1 CDS 31745580 31745645 31745580 ID=Msa0882430-mRNA-1:cds;Parent=Msa0882430-mRNA-1
chr6_1 CDS 31741847 31741935 31741847 ID=Msa0882430-mRNA-1:cds;Parent=Msa0882430-mRNA-1
chr6_1 CDS 31741514 31741659 31741514 ID=Msa0882430-mRNA-1:cds;Parent=Msa0882430-mRNA-1
chr6_1 CDS 31741289 31741413 31741289 ID=Msa0882430-mRNA-1:cds;Parent=Msa0882430-mRNA-1
chr6_1 CDS 31741110 31741203 31741110 ID=Msa0882430-mRNA-1:cds;Parent=Msa0882430-mRNA-1
chr6_1 CDS 31740312 31740475 31740312 ID=Msa0882430-mRNA-1:cds;Parent=Msa0882430-mRNA-1
chr6_1 CDS 31739416 31739577 31739416 ID=Msa0882430-mRNA-1:cds;Parent=Msa0882430-mRNA-1
chr6_1 CDS 31737284 31737410 31737284 ID=Msa0882430-mRNA-1:cds;Parent=Msa0882430-mRNA-1
chr6_1 CDS 31736987 31737153 31736987 ID=Msa0882430-mRNA-1:cds;Parent=Msa0882430-mRNA-1
chr6_1 CDS 31736779 31736886 31736779 ID=Msa0882430-mRNA-1:cds;Parent=Msa0882430-mRNA-1
chr6_1 CDS 31735926 31736024 31735926 ID=Msa0882430-mRNA-1:cds;Parent=Msa0882430-mRNA-1
chr6_1 three_prime_UTR 31735610 31735925 31735610 ID=Msa0882430-mRNA-1:three_prime_utr;Parent=Msa0882430-mRNA-1
Gene Sequence

>Msa0882430

ATGATAGCGATTCCGTATCTCACTGCACTCACAACCTATTTCAGTTACGGTTTGCTCTTCGCTTTCGGTCAATTTCGTGATTTCTTCCGAAAAATCTTTGACTGGTGCAGTTCCAATAATCTTCAGGGTTATGCACCGATCTGTTTAGGACTTGAAGATTTTTATATTCGTAGATTATATCTTCGGATTCAGGACTGTTTTGGGAGACCAATATCAAGTGCTCCTGATGCTTGGTTTGATGTAGTCGAACGCTACTCCAATGACAATAACAAAACACTAAAACGAACCAGTAAAGTAAGTCGATGTCTTAACTTGGGATCATATAACTATCTTGGTTTTGCTGCGGCTGATGAATACTGTACTCCTCGAGTGATTGATACATTGAAGAAGTATTCTCCAAGCACTTGCAGTACCCGGGTGGATGGAGGCACGACAGCACTTCACAATGAATTGGAGGAGTGTGTTGCTAGTTTTGTTAAAAAGCCAGCTGCTTTGGTTTTTGGAATGGGCTACGTGACAAACTCTGCTATTCTTCCGGTCTTGATGGGGAAGGGAAGTTTGATTATTAGTGATTCACTGAACCACAACTCAATTGTTAATGGTGCGCGGGGATCAGGAGCAACTATTCGTGTTTTTCAACACAACGTGCCAGCACATCTAGAAGAAGTGTTACGAGAACAAATTGCTGAGGGACAGCCAAGAACACATAGGCCCTGGAAGAAGATAATGGTTATTGTGGAGGGGATATACAGCATGGAAGGAGAGCTTTGCAAACTTCCAGAGGTCATAGCTATATGCAAAAAATATAAGGCATATACATATTTGGATGAAGCACACAGCATTGGAGCTGTGGGCAAGACAGGAAGGGGTGTTTGTGAGCTCTTGGGTGTGGATACTGCTGATATTGATATTATGATGGGGACATTCACCAAATCATTTGGATCATGTGGAGGTTATATTGCAGGATCTAAGGAGCTTATTGAATATTTGAAGTACACTTGCCCTGCACATCTTTATGCAACTTCAATTTCACCCCCAGCTGCACAACAAATAATATCTTCCATAAAAGTTATTCTTGGCGAAGATGGTTCAAGTCGAGGTGCCCAGAAACTTGCAAAGATCCGAGAAAATAGCAATTTTTTCAGGTCAGAATTGCAGAAGATGGGATTTGAAGTTCTTGGGGATAATGATTCTCCTGTAATGCCAATCATGCTTTACAACCCAGCCAAAATCCCTGCCTTCTCAAGGGAGTGCCTCAGGCAGAATGTTGCTGTTGTAACTGTTGCATTTCCAGCAACCCCATTGCTACTGGCTAGAGCACGCATATGCATATCAGCTTCTCATTCAAGGGAAGACCTTACCAAGGCCTTGCAGGTTATTAGCAGTGTAGGTGATCTAATTGGCATAAAATACTTCCCTGCTGAACCAACGAAGCAACAACAACAAGATGGTAAAACTGTGAAGTTCGAGTGA

Protein sequence

>Msa0882430

MIAIPYLTALTTYFSYGLLFAFGQFRDFFRKIFDWCSSNNLQGYAPICLGLEDFYIRRLYLRIQDCFGRPISSAPDAWFDVVERYSNDNNKTLKRTSKVSRCLNLGSYNYLGFAAADEYCTPRVIDTLKKYSPSTCSTRVDGGTTALHNELEECVASFVKKPAALVFGMGYVTNSAILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNVPAHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKLPEVIAICKKYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTADIDIMMGTFTKSFGSCGGYIAGSKELIEYLKYTCPAHLYATSISPPAAQQIISSIKVILGEDGSSRGAQKLAKIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHSREDLTKALQVISSVGDLIGIKYFPAEPTKQQQQDGKTVKFE*