AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0578410

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0578410 MtrunA17_Chr4g0044811 94.242 521 18 2 1 521 1 509 0.0 1010
Msa0578410 MtrunA17_Chr1g0200791 28.713 202 128 7 190 387 210 399 1.77e-15 78.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0578410 AT3G19280.1 62.335 531 160 4 1 521 1 501 0.0 683
Msa0578410 AT1G49710.1 65.996 497 147 4 27 521 37 513 0.0 681
Msa0578410 AT1G71990.1 33.333 108 71 1 280 387 282 388 9.55e-13 70.5

Find 159 sgRNAs with CRISPR-Local

Find 414 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCAATGTTCAATTTATATT+TGG 0.074564 4_1:-82951346 None:intergenic
TGTTTATTGCTTGTGCTTAT+TGG 0.169615 4_1:+82951448 Msa0578410:five_prime_UTR
TTTAGAATTTGAGGTCTTTC+AGG 0.176747 4_1:-82956937 None:intergenic
GGAGCAAAATCTTGAATATT+TGG 0.188827 4_1:-82955510 None:intergenic
TGTTCAGTGGGATGTAAATT+TGG 0.189104 4_1:+82952710 Msa0578410:CDS
GGATGTAAATTTGGGTTTAA+TGG 0.196217 4_1:+82952719 Msa0578410:CDS
CATTCAGTTATCTTACAAAA+AGG 0.223000 4_1:-82957300 None:intergenic
GATGTAAATTTGGGTTTAAT+GGG 0.244101 4_1:+82952720 Msa0578410:CDS
CAAGGTCGCTTCTTGAAGTC+TGG 0.249475 4_1:-82956013 None:intergenic
TTTCAAAGCCCTTGTGGATA+TGG 0.260182 4_1:+82955919 Msa0578410:CDS
CTGAAACTGGTAAACCTTCT+TGG 0.261326 4_1:-82951816 None:intergenic
CAAATGCAGCCTCAGGTTTC+CGG 0.264039 4_1:-82952745 None:intergenic
AGTTGGTGGTGATAAGAATT+TGG 0.276015 4_1:+82952020 Msa0578410:CDS
ATAAGTATACCTCAAGTAAA+TGG 0.291681 4_1:-82956107 None:intergenic
GAAAAGTCGACGGTTGAAAA+AGG 0.303190 4_1:-82951607 None:intergenic
GTGGTTGAAGGTGATGATTT+TGG 0.305457 4_1:+82951988 Msa0578410:CDS
TTCCTTCTCTCTACTCTTTG+TGG 0.307095 4_1:-82955981 None:intergenic
GCAATGTTCAATTTATATTT+GGG 0.311879 4_1:-82951345 None:intergenic
GAAAGACCTCAAATTCTAAA+AGG 0.322355 4_1:+82956940 Msa0578410:CDS
TCCATACAGGAACATGATTC+AGG 0.327965 4_1:-82956912 None:intergenic
ATATTCAAGGAACTTTAATA+AGG 0.337873 4_1:+82952095 Msa0578410:CDS
AATGAATGATTATATGCTTC+AGG 0.344669 4_1:-82955615 None:intergenic
CGGAAACCTGAGGCTGCATT+TGG 0.349184 4_1:+82952746 Msa0578410:CDS
AGCTAAATTTGTAGCGCGTT+AGG 0.349424 4_1:-82954618 None:intergenic
GTTCAGTGGGATGTAAATTT+GGG 0.358728 4_1:+82952711 Msa0578410:CDS
ACCACAAGTGCTACAAATAA+AGG 0.376044 4_1:-82951880 None:intergenic
TGAAACTGGTAAACCTTCTT+GGG 0.382153 4_1:-82951815 None:intergenic
GAATGTTCATATTTAATGTT+GGG 0.395274 4_1:+82957318 Msa0578410:three_prime_UTR
ACCATTGTTGAAACTGAAAC+TGG 0.398775 4_1:-82951829 None:intergenic
AAATTCGACCATTTCTTCTT+CGG 0.400382 4_1:-82951853 None:intergenic
AACATCTCGATCGACTCTTA+TGG 0.406384 4_1:+82953592 Msa0578410:CDS
CCTACTTTGGCCAACTCATC+GGG 0.406998 4_1:+82957232 Msa0578410:three_prime_UTR
GAAATTTCGAGCACCACAAT+TGG 0.407353 4_1:-82953536 None:intergenic
TTGGAGGTAGAATTAATTGA+TGG 0.407497 4_1:+82951759 Msa0578410:exon
AATCAACATCCCCGTTGAAC+TGG 0.408380 4_1:-82957032 None:intergenic
TTGTCCAACTTGTAACTGTC+TGG 0.411976 4_1:-82957366 None:intergenic
AGAAACTTGTGAGGAGTGGT+TGG 0.412915 4_1:+82952053 Msa0578410:CDS
GGTCTTTCAGGCTTCCATAC+AGG 0.423025 4_1:-82956925 None:intergenic
CGTAAGAACAGCAGTCTTGA+AGG 0.425255 4_1:-82956878 None:intergenic
TTTATACCTTCCAGTTCAAC+GGG 0.427236 4_1:+82957022 Msa0578410:CDS
ACTCTTATGGTAGTTGTCAT+AGG 0.429860 4_1:+82953605 Msa0578410:CDS
ATGAATGATTATATGCTTCA+GGG 0.430093 4_1:-82955614 None:intergenic
TGCCTCTGTGTCAAGCCCGC+AGG 0.433454 4_1:-82956994 None:intergenic
CAATGGTTCCGAAGAAGAAA+TGG 0.435999 4_1:+82951845 Msa0578410:CDS
GCTAAATTTGTAGCGCGTTA+GGG 0.439475 4_1:-82954617 None:intergenic
CGGTCACGTGCGGTGGTTGA+AGG 0.440213 4_1:+82951976 Msa0578410:CDS
ACAGTTGATGTGCACCTGAT+AGG 0.440474 4_1:+82951307 Msa0578410:five_prime_UTR
GCTTGTGGAGGTAGTTGAAA+TGG 0.440524 4_1:-82951669 None:intergenic
CCCTGAATCATGTTCCTGTA+TGG 0.440726 4_1:+82956911 Msa0578410:CDS
ATTGCACTTTAGTCGTCAAT+GGG 0.444933 4_1:-82951543 None:intergenic
ATCATATCTATGTGAGAGAA+AGG 0.446491 4_1:+82956065 Msa0578410:CDS
GATTGCACTTTAGTCGTCAA+TGG 0.448686 4_1:-82951544 None:intergenic
TGAATGTTCATATTTAATGT+TGG 0.452494 4_1:+82957317 Msa0578410:three_prime_UTR
TTGTAATGCCTACCCTACTT+TGG 0.467710 4_1:+82957219 Msa0578410:three_prime_UTR
AGAGAGAAACTTGTGAGGAG+TGG 0.467808 4_1:+82952049 Msa0578410:CDS
GGAACTATCCCTGTGGTTGT+TGG 0.468275 4_1:+82955483 Msa0578410:intron
GCCTTTATTTGTAGCACTTG+TGG 0.470674 4_1:+82951879 Msa0578410:CDS
TTGCCGCCTTTGCATTCACT+TGG 0.471450 4_1:+82955958 Msa0578410:CDS
AAAAGGTGGCGATAAATTGA+AGG 0.471707 4_1:+82956957 Msa0578410:CDS
TCATATCTATGTGAGAGAAA+GGG 0.471718 4_1:+82956066 Msa0578410:CDS
TGCTAGGTATCTCATGGACT+TGG 0.478874 4_1:-82955586 None:intergenic
CTTAATAGGTGGAAGTATGA+AGG 0.479545 4_1:+82955884 Msa0578410:intron
TGAGGAGTGGTTGGAGAGAG+AGG 0.482262 4_1:+82952062 Msa0578410:CDS
TAGGTGATCATGTAAATTGT+AGG 0.484604 4_1:-82957125 None:intergenic
GAAATCAAGGAATTGAAGAT+TGG 0.486045 4_1:+82951740 Msa0578410:five_prime_UTR
GTTTGTGAAATGATTTACTT+TGG 0.489363 4_1:-82951367 None:intergenic
CCCTACTTTGGCCAACTCAT+CGG 0.491718 4_1:+82957231 Msa0578410:three_prime_UTR
AATTTGGGTTTAATGGGGAC+CGG 0.493352 4_1:+82952726 Msa0578410:CDS
AAGTTGGACAACAAGATTGT+GGG 0.495761 4_1:+82957378 Msa0578410:three_prime_UTR
AAGGTCGCTTCTTGAAGTCT+GGG 0.499184 4_1:-82956012 None:intergenic
TGTTGATTTCAGAAGTCACT+TGG 0.501731 4_1:+82957047 Msa0578410:CDS
CTTTATACCTTCCAGTTCAA+CGG 0.510464 4_1:+82957021 Msa0578410:CDS
AATGTAAATCCCCGATGAGT+TGG 0.515882 4_1:-82957242 None:intergenic
TTTGGCTTACCTCAGCAAGC+TGG 0.521291 4_1:+82952764 Msa0578410:CDS
GCCTCTGTGTCAAGCCCGCA+GGG 0.522965 4_1:-82956993 None:intergenic
CCATACCAGCAACAAGCGAC+TGG 0.524286 4_1:-82954690 None:intergenic
TTTATATATCAAAGAACTAG+AGG 0.526597 4_1:+82955548 Msa0578410:CDS
GGGCTTCGAGAGCTTGCAAT+CGG 0.529518 4_1:-82953558 None:intergenic
TTCAAACGAAACAAAAGATA+AGG 0.529677 4_1:-82957439 None:intergenic
CAGATCTAGCAATTTAACTC+TGG 0.532467 4_1:+82956852 Msa0578410:intron
CGACCTTGCAAGTGCACTCG+AGG 0.534412 4_1:+82956028 Msa0578410:CDS
CTATCATCTGACGTCCCTGT+TGG 0.535464 4_1:+82953433 Msa0578410:CDS
TCTTGCCATGGCACGACGGT+GGG 0.536126 4_1:+82952841 Msa0578410:CDS
AGGATGCTGTTACATATTCA+AGG 0.538103 4_1:+82952082 Msa0578410:CDS
AGAAAGGGGAACATTTGAGA+TGG 0.538112 4_1:+82956081 Msa0578410:CDS
TGGAGGTAGAATTAATTGAT+GGG 0.539644 4_1:+82951760 Msa0578410:exon
GACCCTCGAGTGCACTTGCA+AGG 0.544331 4_1:-82956031 None:intergenic
AGATGGAGTCCATTTACTTG+AGG 0.544735 4_1:+82956098 Msa0578410:CDS
GCAAAATCTTGAATATTTGG+AGG 0.547789 4_1:-82955507 None:intergenic
CCCGATGAGTTGGCCAAAGT+AGG 0.548703 4_1:-82957232 None:intergenic
CATAGGAATCGTGATGGAAG+AGG 0.549344 4_1:+82953622 Msa0578410:CDS
GGTAAGCCAAATGCAGCCTC+AGG 0.550885 4_1:-82952752 None:intergenic
ATCAAGGAATTGAAGATTGG+AGG 0.555036 4_1:+82951743 Msa0578410:five_prime_UTR
CCGATGAGTTGGCCAAAGTA+GGG 0.555178 4_1:-82957231 None:intergenic
CCATACAGGAACATGATTCA+GGG 0.555223 4_1:-82956911 None:intergenic
AGCAAGTGTTCTGAGATCAA+TGG 0.556001 4_1:+82952790 Msa0578410:CDS
CTTCAACCACCGCACGTGAC+CGG 0.560057 4_1:-82951975 None:intergenic
ACGACGTAAAATTAAGAAGA+GGG 0.560373 4_1:-82951414 None:intergenic
ATCTTGCCATGGCACGACGG+TGG 0.561163 4_1:+82952840 Msa0578410:CDS
CAAGTTGGACAACAAGATTG+TGG 0.561262 4_1:+82957377 Msa0578410:three_prime_UTR
CTTGTGGAGGTAGTTGAAAT+GGG 0.561566 4_1:-82951668 None:intergenic
GCTTACCCACCGTCGTGCCA+TGG 0.563480 4_1:-82952846 None:intergenic
TGATTCTTTCAAAGCCCTTG+TGG 0.563594 4_1:+82955913 Msa0578410:CDS
TTAATAGGTGGAAGTATGAA+GGG 0.568822 4_1:+82955885 Msa0578410:intron
ATGTAAATTTGGGTTTAATG+GGG 0.569442 4_1:+82952721 Msa0578410:CDS
CATATCTATGTGAGAGAAAG+GGG 0.571252 4_1:+82956067 Msa0578410:CDS
TGGTTGCTGACTTGTTCTAC+CGG 0.572262 4_1:+82951956 Msa0578410:CDS
TTTGGAGGACCAACAACCAC+AGG 0.573436 4_1:-82955492 None:intergenic
TGTAGCACTTGTGGTTATTG+CGG 0.574927 4_1:+82951888 Msa0578410:CDS
AACGACGTAAAATTAAGAAG+AGG 0.575707 4_1:-82951415 None:intergenic
ATGGGCTGAGTATGACATCA+TGG 0.579350 4_1:+82953465 Msa0578410:CDS
GAATGGAAGTCATGTTCAGT+GGG 0.580562 4_1:+82952698 Msa0578410:CDS
ACAACAACAACAACCCAAGA+AGG 0.582368 4_1:+82951802 Msa0578410:CDS
GTAAATCATTTCACAAACAT+AGG 0.583548 4_1:+82951372 Msa0578410:five_prime_UTR
ACAAAGCCATGCCGACTCCA+TGG 0.583599 4_1:-82957200 None:intergenic
TATGGCTAAGAACGCAGCTA+TGG 0.583698 4_1:+82951936 Msa0578410:CDS
ATATCCAGACAGTTACAAGT+TGG 0.588936 4_1:+82957362 Msa0578410:three_prime_UTR
TTTGGGTTAGAGACAGTTGG+TGG 0.590171 4_1:+82952006 Msa0578410:CDS
ACCAGTTTCAGTTTCAACAA+TGG 0.594862 4_1:+82951828 Msa0578410:CDS
TTTAGGAATGAGTATGACCA+TGG 0.596619 4_1:+82957183 Msa0578410:three_prime_UTR
GTTTACAAAATATACCCTGC+GGG 0.597021 4_1:+82956979 Msa0578410:CDS
GTTCTACCGGTCACGTGCGG+TGG 0.597759 4_1:+82951969 Msa0578410:CDS
AGGGACGTCAGATGATAGAC+TGG 0.597764 4_1:-82953428 None:intergenic
AATCATTTCACAAACATAGG+AGG 0.599221 4_1:+82951375 Msa0578410:five_prime_UTR
ATTACTTCAAACTTGGCACA+AGG 0.599899 4_1:-82957078 None:intergenic
TAAGTGAAAGAGCTAATGCT+AGG 0.600320 4_1:-82957144 None:intergenic
CTTGCTGTTCCAGCTTGCTG+AGG 0.609503 4_1:-82952773 None:intergenic
AACATCCCCGTTGAACTGGA+AGG 0.611381 4_1:-82957028 None:intergenic
ATTTGAAAATTCTAACGAGG+AGG 0.613665 4_1:+82954645 Msa0578410:CDS
GGCCACAAAGAGTAGAGAGA+AGG 0.614704 4_1:+82955979 Msa0578410:CDS
TGAGTTGGCCAAAGTAGGGT+AGG 0.615807 4_1:-82957227 None:intergenic
ATTAGAGAGAGAAACTTGTG+AGG 0.617371 4_1:+82952044 Msa0578410:CDS
TGTTCTGAGATCAATGGAGT+CGG 0.617911 4_1:+82952796 Msa0578410:CDS
AATGAGTATGACCATGGAGT+CGG 0.621200 4_1:+82957189 Msa0578410:three_prime_UTR
GGAATGGAAGTCATGTTCAG+TGG 0.622651 4_1:+82952697 Msa0578410:intron
AGTTGTCATAGGAATCGTGA+TGG 0.623002 4_1:+82953616 Msa0578410:CDS
AGACCTCAAATTCTAAAAGG+TGG 0.623532 4_1:+82956943 Msa0578410:CDS
TGCAGAGAACAATCTTGCCA+TGG 0.638573 4_1:+82952829 Msa0578410:CDS
GTATGACCATGGAGTCGGCA+TGG 0.639743 4_1:+82957194 Msa0578410:three_prime_UTR
GTACAGCTGCCATATCCACA+AGG 0.639994 4_1:-82955928 None:intergenic
AAGCATATAATCATTCATTG+AGG 0.644737 4_1:+82955619 Msa0578410:CDS
TTGTGGCCAAGTGAATGCAA+AGG 0.647931 4_1:-82955964 None:intergenic
TGGCCAAGTGAATGCAAAGG+CGG 0.648142 4_1:-82955961 None:intergenic
GACCTTGCAAGTGCACTCGA+GGG 0.651570 4_1:+82956029 Msa0578410:CDS
AGGGCTTTGAAAGAATCAGA+TGG 0.653261 4_1:-82955908 None:intergenic
AATGTTCAAAGTCTACGGAG+TGG 0.663539 4_1:-82951507 None:intergenic
TAATGGGGACCGGAAACCTG+AGG 0.665866 4_1:+82952736 Msa0578410:CDS
TGAAGAGAGAGAAAAGTCGA+CGG 0.672347 4_1:-82951617 None:intergenic
CTTGTTCTACCGGTCACGTG+CGG 0.672406 4_1:+82951966 Msa0578410:CDS
AGCATTTGAAAATTCTAACG+AGG 0.673819 4_1:+82954642 Msa0578410:CDS
ACCCTGCGGGCTTGACACAG+AGG 0.679828 4_1:+82956992 Msa0578410:CDS
CTACTTTGGCCAACTCATCG+GGG 0.698540 4_1:+82957233 Msa0578410:three_prime_UTR
TTGGAGGACCAACAACCACA+GGG 0.701308 4_1:-82955491 None:intergenic
TACAGCTGCCATATCCACAA+GGG 0.711712 4_1:-82955927 None:intergenic
ACAATCTTGCCATGGCACGA+CGG 0.711769 4_1:+82952837 Msa0578410:CDS
TGTTGTAGGAACTATCCCTG+TGG 0.713149 4_1:+82955476 Msa0578410:intron
GGTTTACAAAATATACCCTG+CGG 0.717875 4_1:+82956978 Msa0578410:CDS
TTGCACTTTAGTCGTCAATG+GGG 0.725763 4_1:-82951542 None:intergenic
TTATACCTTCCAGTTCAACG+GGG 0.752006 4_1:+82957023 Msa0578410:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTCTAAAAAAAATTGAAAT+AGG - chr4_1:82953336-82953355 None:intergenic 10.0%
!!! AATAACTTTTAATTTGTTTT+TGG - chr4_1:82954819-82954838 None:intergenic 10.0%
!!! AAACAAATTAAAAGTTATTT+TGG + chr4_1:82954820-82954839 Msa0578410:intron 10.0%
!!! AAATCAAAATATCCATATTT+TGG - chr4_1:82952554-82952573 None:intergenic 15.0%
!!! AACTTTATTTAAAAGAATGA+AGG + chr4_1:82954207-82954226 Msa0578410:intron 15.0%
!! TTGATATATAAAAATGAATC+AGG - chr4_1:82955540-82955559 None:intergenic 15.0%
!!! TATTTGATCGTAATTTATTT+TGG - chr4_1:82956197-82956216 None:intergenic 15.0%
!!! TATGATACTATTTATTTCTT+AGG - chr4_1:82956286-82956305 None:intergenic 15.0%
!!! TATGATACTATTTATTTCTT+AGG - chr4_1:82956286-82956305 None:intergenic 15.0%
!! GCAATGTTCAATTTATATTT+GGG - chr4_1:82951348-82951367 None:intergenic 20.0%
!! ATATTCAAGGAACTTTAATA+AGG + chr4_1:82952095-82952114 Msa0578410:CDS 20.0%
!! GTGAATAAATTTCATCAAAA+AGG - chr4_1:82952346-82952365 None:intergenic 20.0%
!!! TATCTGAAAAATGTTGTTTT+TGG + chr4_1:82952525-82952544 Msa0578410:intron 20.0%
!! TTGATGAAAACTAAAAACAA+AGG - chr4_1:82953275-82953294 None:intergenic 20.0%
!!! AGAAGTTATTTTCAAAAACT+AGG - chr4_1:82953807-82953826 None:intergenic 20.0%
!!! TCAGATGAAGAATTTTAAAA+GGG + chr4_1:82954012-82954031 Msa0578410:intron 20.0%
!!! ATAATGCTTTTTGAAAGAAT+TGG + chr4_1:82954277-82954296 Msa0578410:intron 20.0%
!! AATTGTCATACATAAACAAT+GGG - chr4_1:82954501-82954520 None:intergenic 20.0%
!! TAATTGTCATACATAAACAA+TGG - chr4_1:82954502-82954521 None:intergenic 20.0%
!!! AATGTACCATAATTTTTGTT+TGG - chr4_1:82955164-82955183 None:intergenic 20.0%
!! AAACAAAAATTATGGTACAT+TGG + chr4_1:82955163-82955182 Msa0578410:intron 20.0%
!! AACAAAAATTATGGTACATT+GGG + chr4_1:82955164-82955183 Msa0578410:intron 20.0%
!! TTTATATATCAAAGAACTAG+AGG + chr4_1:82955548-82955567 Msa0578410:CDS 20.0%
!! ATTATATACTGCAATATTCT+AGG - chr4_1:82955769-82955788 None:intergenic 20.0%
!! AATATTGCAGTATATAATCT+GGG + chr4_1:82955771-82955790 Msa0578410:intron 20.0%
!!! ATTTGGTTTTAAAATGTGAA+TGG + chr4_1:82955806-82955825 Msa0578410:intron 20.0%
!!! TTTTTGTATTTTGTGATTTG+TGG + chr4_1:82955842-82955861 Msa0578410:intron 20.0%
!! ACTTATTTGAATTTATCTAC+TGG - chr4_1:82956718-82956737 None:intergenic 20.0%
!! ATTCAGTTATCTTACAAAAA+GGG - chr4_1:82957302-82957321 None:intergenic 20.0%
!! TGAATGTTCATATTTAATGT+TGG + chr4_1:82957317-82957336 Msa0578410:three_prime_UTR 20.0%
!! GAATGTTCATATTTAATGTT+GGG + chr4_1:82957318-82957337 Msa0578410:three_prime_UTR 20.0%
! GGCAATGTTCAATTTATATT+TGG - chr4_1:82951349-82951368 None:intergenic 25.0%
! GTTTGTGAAATGATTTACTT+TGG - chr4_1:82951370-82951389 None:intergenic 25.0%
! GTAAATCATTTCACAAACAT+AGG + chr4_1:82951372-82951391 Msa0578410:five_prime_UTR 25.0%
!! TTTTCAATGTTCAAAGTCTA+CGG - chr4_1:82951515-82951534 None:intergenic 25.0%
!!! TATTTTTTCACCCAAAAACT+TGG - chr4_1:82951716-82951735 None:intergenic 25.0%
!!! TTTTTGGGTGAAAAAATAGT+GGG + chr4_1:82951718-82951737 Msa0578410:five_prime_UTR 25.0%
! CTTGATACAAATAATTCACA+TGG - chr4_1:82952302-82952321 None:intergenic 25.0%
! CATGTGAATTATTTGTATCA+AGG + chr4_1:82952300-82952319 Msa0578410:intron 25.0%
!! GATGTAAATTTGGGTTTAAT+GGG + chr4_1:82952720-82952739 Msa0578410:CDS 25.0%
!! ATGTAAATTTGGGTTTAATG+GGG + chr4_1:82952721-82952740 Msa0578410:CDS 25.0%
!! GTTGATTCATTACATTTGAT+TGG + chr4_1:82952882-82952901 Msa0578410:intron 25.0%
!! TTTTCTAATGGTTTCTCTAA+TGG - chr4_1:82952958-82952977 None:intergenic 25.0%
! AACCATTAGAAAAGATTTAG+AGG + chr4_1:82952965-82952984 Msa0578410:intron 25.0%
! GTTCTATCAAAAACCATATT+TGG - chr4_1:82953005-82953024 None:intergenic 25.0%
!!! GTTGTTGTAGTATTTTAGTA+TGG + chr4_1:82953085-82953104 Msa0578410:intron 25.0%
!!! TTCGTTTTTCTTGTTTTCTA+AGG + chr4_1:82953301-82953320 Msa0578410:intron 25.0%
!!! TTTTCAGTTTTTGGCTTTAT+CGG - chr4_1:82953493-82953512 None:intergenic 25.0%
! AAAACATCATAATCAGACAT+TGG - chr4_1:82953680-82953699 None:intergenic 25.0%
!!! ATCAGAAAGCATTTTATACA+TGG - chr4_1:82953834-82953853 None:intergenic 25.0%
! CATCAAGATTTATAAATGAG+AGG + chr4_1:82953935-82953954 Msa0578410:intron 25.0%
!! TTTAAAATTCTTCATCTGAC+AGG - chr4_1:82954011-82954030 None:intergenic 25.0%
!! GTCAGATGAAGAATTTTAAA+AGG + chr4_1:82954011-82954030 Msa0578410:intron 25.0%
! TAAACTTTAACTCAGTGATT+TGG + chr4_1:82954043-82954062 Msa0578410:intron 25.0%
! GAAAGGAAGAAACAAAAAAT+GGG - chr4_1:82954113-82954132 None:intergenic 25.0%
! ATTTAAAAGAATGAAGGAGT+TGG + chr4_1:82954213-82954232 Msa0578410:intron 25.0%
! TTATCCTTGAAGATCTATAT+TGG + chr4_1:82954330-82954349 Msa0578410:intron 25.0%
! ACAAAAATTCATTGGAAGTT+TGG - chr4_1:82954529-82954548 None:intergenic 25.0%
! TACGAACAACAAAAATTCAT+TGG - chr4_1:82954537-82954556 None:intergenic 25.0%
!! ATTATTCTATTTTGTCACAG+TGG + chr4_1:82954582-82954601 Msa0578410:intron 25.0%
! ATGTGTTGAATTTGAATAAC+TGG - chr4_1:82954750-82954769 None:intergenic 25.0%
! TTATTCAAATTCAACACATG+TGG + chr4_1:82954751-82954770 Msa0578410:intron 25.0%
!! CATAAAATTTTCACAACTGA+TGG - chr4_1:82954871-82954890 None:intergenic 25.0%
! CTTCAACTCTAAATAAACTT+TGG - chr4_1:82954911-82954930 None:intergenic 25.0%
!!! TTAGTCGTTTTTATAATTGC+AGG + chr4_1:82954989-82955008 Msa0578410:intron 25.0%
! GATGAACCAAACAAAAATTA+TGG + chr4_1:82955155-82955174 Msa0578410:intron 25.0%
!! CAATTTTATTGCAAATGAAG+TGG + chr4_1:82955218-82955237 Msa0578410:intron 25.0%
! TAGAGAAAAAATTGTCTTTC+AGG - chr4_1:82955260-82955279 None:intergenic 25.0%
! AAGTGAATTTCCATGTATAA+TGG + chr4_1:82955349-82955368 Msa0578410:intron 25.0%
!! AAATTTTCCACCATTATACA+TGG - chr4_1:82955362-82955381 None:intergenic 25.0%
!!! AATGGTGGAAAATTTTATAG+CGG + chr4_1:82955367-82955386 Msa0578410:intron 25.0%
! TATAAAAATGAATCAGGAGA+AGG - chr4_1:82955534-82955553 None:intergenic 25.0%
! ATGAATGATTATATGCTTCA+GGG - chr4_1:82955617-82955636 None:intergenic 25.0%
! AATGAATGATTATATGCTTC+AGG - chr4_1:82955618-82955637 None:intergenic 25.0%
! AAGCATATAATCATTCATTG+AGG + chr4_1:82955619-82955638 Msa0578410:CDS 25.0%
! TGAAAACAAACAAGTTTCTT+CGG + chr4_1:82955655-82955674 Msa0578410:intron 25.0%
!!! AATATTCTAGGATCCAATTA+TGG - chr4_1:82955757-82955776 None:intergenic 25.0%
! GAATATTGCAGTATATAATC+TGG + chr4_1:82955770-82955789 Msa0578410:intron 25.0%
! ATAAGTATACCTCAAGTAAA+TGG - chr4_1:82956110-82956129 None:intergenic 25.0%
! TAGTATCATATGATTGTGTT+TGG + chr4_1:82956296-82956315 Msa0578410:intron 25.0%
! GAATATCATATGATTGTGTT+TGG + chr4_1:82956376-82956395 Msa0578410:intron 25.0%
! TAGTATCATATGATTGTGTT+TGG + chr4_1:82956296-82956315 Msa0578410:intron 25.0%
!!! TGTTTTAATATAAGCTATCC+TGG + chr4_1:82956602-82956621 Msa0578410:intron 25.0%
! AATAACCAGAAAAGAACTTA+TGG + chr4_1:82956637-82956656 Msa0578410:intron 25.0%
! TAAAATGATAGGTACCATAA+TGG - chr4_1:82956762-82956781 None:intergenic 25.0%
! ATGGAATAAGCTAAAATGAT+AGG - chr4_1:82956773-82956792 None:intergenic 25.0%
! CATGACATTCTTAATAAAGA+TGG - chr4_1:82956792-82956811 None:intergenic 25.0%
!!! ACACATTATTTTGACACAAA+TGG + chr4_1:82956828-82956847 Msa0578410:intron 25.0%
!!! CACATTATTTTGACACAAAT+GGG + chr4_1:82956829-82956848 Msa0578410:intron 25.0%
! CACAAAAATTACTTCAAACT+TGG - chr4_1:82957088-82957107 None:intergenic 25.0%
! TTCAGTTATCTTACAAAAAG+GGG - chr4_1:82957301-82957320 None:intergenic 25.0%
! CATTCAGTTATCTTACAAAA+AGG - chr4_1:82957303-82957322 None:intergenic 25.0%
! TTCAAACGAAACAAAAGATA+AGG - chr4_1:82957442-82957461 None:intergenic 25.0%
!!! TATATTTGGGCTTTTGAGAT+GGG - chr4_1:82951335-82951354 None:intergenic 30.0%
!! TTATATTTGGGCTTTTGAGA+TGG - chr4_1:82951336-82951355 None:intergenic 30.0%
AATCATTTCACAAACATAGG+AGG + chr4_1:82951375-82951394 Msa0578410:five_prime_UTR 30.0%
ACGACGTAAAATTAAGAAGA+GGG - chr4_1:82951417-82951436 None:intergenic 30.0%
AACGACGTAAAATTAAGAAG+AGG - chr4_1:82951418-82951437 None:intergenic 30.0%
TGTTTATTGCTTGTGCTTAT+TGG + chr4_1:82951448-82951467 Msa0578410:five_prime_UTR 30.0%
! CATCTTCAATCCAAGTTTTT+GGG + chr4_1:82951703-82951722 Msa0578410:five_prime_UTR 30.0%
!!! GTTTTTGGGTGAAAAAATAG+TGG + chr4_1:82951717-82951736 Msa0578410:five_prime_UTR 30.0%
! GAAAAAATAGTGGGAAATCA+AGG + chr4_1:82951727-82951746 Msa0578410:five_prime_UTR 30.0%
GAAATCAAGGAATTGAAGAT+TGG + chr4_1:82951740-82951759 Msa0578410:five_prime_UTR 30.0%
TTGGAGGTAGAATTAATTGA+TGG + chr4_1:82951759-82951778 Msa0578410:exon 30.0%
TGGAGGTAGAATTAATTGAT+GGG + chr4_1:82951760-82951779 Msa0578410:exon 30.0%
AAATTCGACCATTTCTTCTT+CGG - chr4_1:82951856-82951875 None:intergenic 30.0%
AGTTGTAGCAAATTTGTGTT+TGG + chr4_1:82952229-82952248 Msa0578410:intron 30.0%
ATTCACAAGCTAGATGATTA+TGG + chr4_1:82952360-82952379 Msa0578410:intron 30.0%
AAGCATATTCAAAATCAACC+AGG + chr4_1:82952389-82952408 Msa0578410:intron 30.0%
! TTTTGTGGTTTATTTCCTGA+TGG + chr4_1:82952431-82952450 Msa0578410:intron 30.0%
TTCAGTGACAAGTTTAATCA+TGG + chr4_1:82952573-82952592 Msa0578410:intron 30.0%
ACTTCATAAGAACAATAACC+AGG - chr4_1:82952639-82952658 None:intergenic 30.0%
GTTATTAGTTCATTCAATGC+AGG + chr4_1:82952676-82952695 Msa0578410:intron 30.0%
! GGATGTAAATTTGGGTTTAA+TGG + chr4_1:82952719-82952738 Msa0578410:CDS 30.0%
! GACCTCTAAATCTTTTCTAA+TGG - chr4_1:82952970-82952989 None:intergenic 30.0%
! TGGTTTTTGATAGAACGTTA+TGG + chr4_1:82953009-82953028 Msa0578410:intron 30.0%
! GAAACTTTTGTGGTTTAATG+TGG + chr4_1:82953143-82953162 Msa0578410:intron 30.0%
!! TATCTTCTCTCATTTTTGAC+TGG + chr4_1:82953195-82953214 Msa0578410:CDS 30.0%
!! TTTTGACTGGATTTAAAACC+AGG + chr4_1:82953208-82953227 Msa0578410:CDS 30.0%
TTTCTTTGTCATTGTCTACT+AGG + chr4_1:82953380-82953399 Msa0578410:intron 30.0%
!!! CGAGATGTTTGTTTTTTCTA+GGG - chr4_1:82953581-82953600 None:intergenic 30.0%
!!! TCGAGATGTTTGTTTTTTCT+AGG - chr4_1:82953582-82953601 None:intergenic 30.0%
! TTTTGCTGCATTATCTTGTT+TGG + chr4_1:82953726-82953745 Msa0578410:intron 30.0%
! GCATTATCTTGTTTGGAATA+CGG + chr4_1:82953733-82953752 Msa0578410:intron 30.0%
AACATTTGATCCATAGATCT+TGG + chr4_1:82953912-82953931 Msa0578410:intron 30.0%
GGGAAAATAGAGAAATCAAA+GGG - chr4_1:82954093-82954112 None:intergenic 30.0%
TGGGAAAATAGAGAAATCAA+AGG - chr4_1:82954094-82954113 None:intergenic 30.0%
GGAAAGGAAGAAACAAAAAA+TGG - chr4_1:82954114-82954133 None:intergenic 30.0%
GAAACAAAAGTTCAAGAAAG+TGG - chr4_1:82954255-82954274 None:intergenic 30.0%
!! ATGCTTTTTGAAAGAATTGG+TGG + chr4_1:82954280-82954299 Msa0578410:intron 30.0%
!! TGCTTTTTGAAAGAATTGGT+GGG + chr4_1:82954281-82954300 Msa0578410:intron 30.0%
AACACCAATATAGATCTTCA+AGG - chr4_1:82954337-82954356 None:intergenic 30.0%
ATCTTCAAGGATGATTGTTT+GGG - chr4_1:82954363-82954382 None:intergenic 30.0%
AATCTTCAAGGATGATTGTT+TGG - chr4_1:82954364-82954383 None:intergenic 30.0%
TCATCCTTGAAGATTTATAC+TGG + chr4_1:82954369-82954388 Msa0578410:intron 30.0%
! GACTTTTCATATCGAATTGT+TGG - chr4_1:82954423-82954442 None:intergenic 30.0%
TAAATGTGCAAAATCCAGTA+TGG + chr4_1:82954462-82954481 Msa0578410:intron 30.0%
AGCATTTGAAAATTCTAACG+AGG + chr4_1:82954642-82954661 Msa0578410:CDS 30.0%
ATTTGAAAATTCTAACGAGG+AGG + chr4_1:82954645-82954664 Msa0578410:CDS 30.0%
! TTAGAGTTGAAGCTCAATTT+TGG + chr4_1:82954919-82954938 Msa0578410:intron 30.0%
! AAGCTCAATTTTGGATAACT+TGG + chr4_1:82954928-82954947 Msa0578410:intron 30.0%
ATACTAGATCAGATTCAGAT+GGG - chr4_1:82955076-82955095 None:intergenic 30.0%
! AGAATGCAAAGTATTAATGC+AGG - chr4_1:82955117-82955136 None:intergenic 30.0%
AATATGACGCAATGGTATAT+TGG - chr4_1:82955313-82955332 None:intergenic 30.0%
TATAGTAGAATATGACGCAA+TGG - chr4_1:82955321-82955340 None:intergenic 30.0%
TGAATTTCCATGTATAATGG+TGG + chr4_1:82955352-82955371 Msa0578410:intron 30.0%
!! ATGGTGGAAAATTTTATAGC+GGG + chr4_1:82955368-82955387 Msa0578410:intron 30.0%
GCAAAATCTTGAATATTTGG+AGG - chr4_1:82955510-82955529 None:intergenic 30.0%
GGAGCAAAATCTTGAATATT+TGG - chr4_1:82955513-82955532 None:intergenic 30.0%
CATAATGACTTAATACGAGA+GGG - chr4_1:82955701-82955720 None:intergenic 30.0%
ACATAATGACTTAATACGAG+AGG - chr4_1:82955702-82955721 None:intergenic 30.0%
ATTTATTTACATTGCACCGA+AGG + chr4_1:82955723-82955742 Msa0578410:intron 30.0%
! AATTATGGTGTTAAGTCCTT+CGG - chr4_1:82955742-82955761 None:intergenic 30.0%
TGCTGAGTTATCTTCTTAAT+AGG + chr4_1:82955870-82955889 Msa0578410:intron 30.0%
TGAGTTATCTTCTTAATAGG+TGG + chr4_1:82955873-82955892 Msa0578410:intron 30.0%
! TTAATAGGTGGAAGTATGAA+GGG + chr4_1:82955885-82955904 Msa0578410:intron 30.0%
ATCATATCTATGTGAGAGAA+AGG + chr4_1:82956065-82956084 Msa0578410:CDS 30.0%
TCATATCTATGTGAGAGAAA+GGG + chr4_1:82956066-82956085 Msa0578410:CDS 30.0%
ATCAAGTTTAACACAAGTAC+TGG - chr4_1:82956232-82956251 None:intergenic 30.0%
AGTACTTGTGTTAAACTTGA+TGG + chr4_1:82956231-82956250 Msa0578410:intron 30.0%
!!! AAACACTTTTGAGACTGTTA+GGG - chr4_1:82956692-82956711 None:intergenic 30.0%
!!! TAAACACTTTTGAGACTGTT+AGG - chr4_1:82956693-82956712 None:intergenic 30.0%
!! TAGGTACCATAATGGATTTA+GGG - chr4_1:82956754-82956773 None:intergenic 30.0%
!! ATAGGTACCATAATGGATTT+AGG - chr4_1:82956755-82956774 None:intergenic 30.0%
! TTTAGAATTTGAGGTCTTTC+AGG - chr4_1:82956940-82956959 None:intergenic 30.0%
GAAAGACCTCAAATTCTAAA+AGG + chr4_1:82956940-82956959 Msa0578410:CDS 30.0%
TAGGTGATCATGTAAATTGT+AGG - chr4_1:82957128-82957147 None:intergenic 30.0%
! AACTGAGAGAATGAAGTTTT+AGG + chr4_1:82957166-82957185 Msa0578410:three_prime_UTR 30.0%
TACAAAAAGGGGTTTAAGTA+TGG - chr4_1:82957290-82957309 None:intergenic 30.0%
! CACATCAACTGTCTTTTCTT+TGG - chr4_1:82951299-82951318 None:intergenic 35.0%
ATTGCACTTTAGTCGTCAAT+GGG - chr4_1:82951546-82951565 None:intergenic 35.0%
! TTTGCATTTCTTTTCGTCGA+CGG + chr4_1:82951567-82951586 Msa0578410:five_prime_UTR 35.0%
GATGGAAAAAATGAAGCTTG+TGG - chr4_1:82951687-82951706 None:intergenic 35.0%
CCAAAAACTTGGATTGAAGA+TGG - chr4_1:82951705-82951724 None:intergenic 35.0%
! CCATCTTCAATCCAAGTTTT+TGG + chr4_1:82951702-82951721 Msa0578410:five_prime_UTR 35.0%
ATCAAGGAATTGAAGATTGG+AGG + chr4_1:82951743-82951762 Msa0578410:five_prime_UTR 35.0%
TGAAACTGGTAAACCTTCTT+GGG - chr4_1:82951818-82951837 None:intergenic 35.0%
ACCAGTTTCAGTTTCAACAA+TGG + chr4_1:82951828-82951847 Msa0578410:CDS 35.0%
ACCATTGTTGAAACTGAAAC+TGG - chr4_1:82951832-82951851 None:intergenic 35.0%
ACCACAAGTGCTACAAATAA+AGG - chr4_1:82951883-82951902 None:intergenic 35.0%
! TGGTTGAAGGTGATGATTTT+GGG + chr4_1:82951989-82952008 Msa0578410:CDS 35.0%
!! AGTTGGTGGTGATAAGAATT+TGG + chr4_1:82952020-82952039 Msa0578410:CDS 35.0%
ATTAGAGAGAGAAACTTGTG+AGG + chr4_1:82952044-82952063 Msa0578410:CDS 35.0%
AGGATGCTGTTACATATTCA+AGG + chr4_1:82952082-82952101 Msa0578410:CDS 35.0%
!!! AAGGAACCTGTTTTTGTTTC+TGG + chr4_1:82952114-82952133 Msa0578410:CDS 35.0%
AGATTAAGAACAGCTTAACC+TGG - chr4_1:82952410-82952429 None:intergenic 35.0%
! GCTGTTCTTAATCTGTTTTG+TGG + chr4_1:82952416-82952435 Msa0578410:intron 35.0%
!!! TGTTTTTGGCAGCCAAAATA+TGG + chr4_1:82952539-82952558 Msa0578410:intron 35.0%
TATTCACATATGTTACCTCC+TGG + chr4_1:82952618-82952637 Msa0578410:intron 35.0%
TCATAAGAACAATAACCAGG+AGG - chr4_1:82952636-82952655 None:intergenic 35.0%
TAGTTCATTCAATGCAGGAA+TGG + chr4_1:82952681-82952700 Msa0578410:intron 35.0%
TGTTCAGTGGGATGTAAATT+TGG + chr4_1:82952710-82952729 Msa0578410:CDS 35.0%
GTTCAGTGGGATGTAAATTT+GGG + chr4_1:82952711-82952730 Msa0578410:CDS 35.0%
AGATTTAGAGGTCAATGAGT+TGG + chr4_1:82952977-82952996 Msa0578410:intron 35.0%
! CAATGAGTTGGATCCAAATA+TGG + chr4_1:82952989-82953008 Msa0578410:intron 35.0%
! AGTATGGTTCTATAGTTCCA+TGG + chr4_1:82953101-82953120 Msa0578410:intron 35.0%
TATAGTTCCATGGAAATGTG+TGG + chr4_1:82953111-82953130 Msa0578410:intron 35.0%
ATAGTTCCATGGAAATGTGT+GGG + chr4_1:82953112-82953131 Msa0578410:intron 35.0%
TTTGTCATTGTCTACTAGGA+GGG + chr4_1:82953384-82953403 Msa0578410:intron 35.0%
! TCCCTGTTGGATATTTTTCA+TGG + chr4_1:82953446-82953465 Msa0578410:CDS 35.0%
CCCATGAAAAATATCCAACA+GGG - chr4_1:82953450-82953469 None:intergenic 35.0%
! CCCTGTTGGATATTTTTCAT+GGG + chr4_1:82953447-82953466 Msa0578410:CDS 35.0%
!!! GCAAGAGCTTTTTCAGTTTT+TGG - chr4_1:82953502-82953521 None:intergenic 35.0%
!!! GCTGCTTTTATTTCCAATTG+TGG + chr4_1:82953523-82953542 Msa0578410:CDS 35.0%
ACTCTTATGGTAGTTGTCAT+AGG + chr4_1:82953605-82953624 Msa0578410:CDS 35.0%
AAGATAATGCAGCAAAAGTG+GGG - chr4_1:82953723-82953742 None:intergenic 35.0%
CAAGATAATGCAGCAAAAGT+GGG - chr4_1:82953724-82953743 None:intergenic 35.0%
ACAAGATAATGCAGCAAAAG+TGG - chr4_1:82953725-82953744 None:intergenic 35.0%
! TTATCTTGTTTGGAATACGG+AGG + chr4_1:82953736-82953755 Msa0578410:intron 35.0%
AATCTTGATGCCAAGATCTA+TGG - chr4_1:82953925-82953944 None:intergenic 35.0%
GGATTAGGCATTAAGTTTAC+AGG - chr4_1:82953990-82954009 None:intergenic 35.0%
ATTCTTCATCTGACAGGATT+AGG - chr4_1:82954005-82954024 None:intergenic 35.0%
! TTGTTTCTTCCTTTCCTTCT+TGG + chr4_1:82954118-82954137 Msa0578410:intron 35.0%
TGTTTCTTCCTTTCCTTCTT+GGG + chr4_1:82954119-82954138 Msa0578410:intron 35.0%
CAAAAGTTCAAGAAAGTGGA+AGG - chr4_1:82954251-82954270 None:intergenic 35.0%
!! GCTTTTTGAAAGAATTGGTG+GGG + chr4_1:82954282-82954301 Msa0578410:intron 35.0%
AACGCCAGTATAAATCTTCA+AGG - chr4_1:82954376-82954395 None:intergenic 35.0%
! GAACAATTTCAAGTCCATAC+TGG - chr4_1:82954479-82954498 None:intergenic 35.0%
CTGGTAAATGAAAGTAAGAG+AGG - chr4_1:82954731-82954750 None:intergenic 35.0%
ACATGTGGAATAGTTGTTCA+AGG + chr4_1:82954766-82954785 Msa0578410:intron 35.0%
CATGTGGAATAGTTGTTCAA+GGG + chr4_1:82954767-82954786 Msa0578410:intron 35.0%
!!! TTTTGGTTCTTGCTTCCATT+TGG + chr4_1:82954837-82954856 Msa0578410:intron 35.0%
CTGATGGAGAAAAAACCAAA+TGG - chr4_1:82954855-82954874 None:intergenic 35.0%
AAACTTTGGCAATTGCATTG+CGG - chr4_1:82954897-82954916 None:intergenic 35.0%
TAAAGCAGCATTGTCTAAGA+TGG - chr4_1:82955045-82955064 None:intergenic 35.0%
GATACTAGATCAGATTCAGA+TGG - chr4_1:82955077-82955096 None:intergenic 35.0%
GATCTAGTATCAGTGTCTAT+TGG + chr4_1:82955086-82955105 Msa0578410:intron 35.0%
ATGGTACATTGGGTAGTAAA+TGG + chr4_1:82955174-82955193 Msa0578410:intron 35.0%
! TGGTGGAAAATTTTATAGCG+GGG + chr4_1:82955369-82955388 Msa0578410:intron 35.0%
!! TGCAGAAGAAGTTTTGTAAG+AGG - chr4_1:82955445-82955464 None:intergenic 35.0%
! GCAAATCAATCTCTTGTTGT+AGG + chr4_1:82955462-82955481 Msa0578410:intron 35.0%
GAAGGACTTAACACCATAAT+TGG + chr4_1:82955741-82955760 Msa0578410:intron 35.0%
! CTTAATAGGTGGAAGTATGA+AGG + chr4_1:82955884-82955903 Msa0578410:intron 35.0%
CATATCTATGTGAGAGAAAG+GGG + chr4_1:82956067-82956086 Msa0578410:CDS 35.0%
! TTAAACTTGATGGCATCTCT+TGG + chr4_1:82956241-82956260 Msa0578410:intron 35.0%
TTAAGCTGTTTACCCAAACA+GGG - chr4_1:82956501-82956520 None:intergenic 35.0%
ATTAAGCTGTTTACCCAAAC+AGG - chr4_1:82956502-82956521 None:intergenic 35.0%
! CATGTCCATAAGTTCTTTTC+TGG - chr4_1:82956645-82956664 None:intergenic 35.0%
AACAGACCCTAAATCCATTA+TGG + chr4_1:82956745-82956764 Msa0578410:intron 35.0%
CAGATCTAGCAATTTAACTC+TGG + chr4_1:82956852-82956871 Msa0578410:intron 35.0%
! AGACCTCAAATTCTAAAAGG+TGG + chr4_1:82956943-82956962 Msa0578410:CDS 35.0%
AAAAGGTGGCGATAAATTGA+AGG + chr4_1:82956957-82956976 Msa0578410:CDS 35.0%
GGTTTACAAAATATACCCTG+CGG + chr4_1:82956978-82956997 Msa0578410:CDS 35.0%
GTTTACAAAATATACCCTGC+GGG + chr4_1:82956979-82956998 Msa0578410:CDS 35.0%
CTTTATACCTTCCAGTTCAA+CGG + chr4_1:82957021-82957040 Msa0578410:CDS 35.0%
TTTATACCTTCCAGTTCAAC+GGG + chr4_1:82957022-82957041 Msa0578410:CDS 35.0%
!! TGTTGATTTCAGAAGTCACT+TGG + chr4_1:82957047-82957066 Msa0578410:CDS 35.0%
ATTACTTCAAACTTGGCACA+AGG - chr4_1:82957081-82957100 None:intergenic 35.0%
TAAGTGAAAGAGCTAATGCT+AGG - chr4_1:82957147-82957166 None:intergenic 35.0%
TTTAGGAATGAGTATGACCA+TGG + chr4_1:82957183-82957202 Msa0578410:three_prime_UTR 35.0%
ATATCCAGACAGTTACAAGT+TGG + chr4_1:82957362-82957381 Msa0578410:three_prime_UTR 35.0%
AAGTTGGACAACAAGATTGT+GGG + chr4_1:82957378-82957397 Msa0578410:three_prime_UTR 35.0%
!!! TTTTGAGATGGGTTCCTATC+AGG - chr4_1:82951324-82951343 None:intergenic 40.0%
AATGTTCAAAGTCTACGGAG+TGG - chr4_1:82951510-82951529 None:intergenic 40.0%
TTGCACTTTAGTCGTCAATG+GGG - chr4_1:82951545-82951564 None:intergenic 40.0%
GATTGCACTTTAGTCGTCAA+TGG - chr4_1:82951547-82951566 None:intergenic 40.0%
GAAAAGTCGACGGTTGAAAA+AGG - chr4_1:82951610-82951629 None:intergenic 40.0%
TGAAGAGAGAGAAAAGTCGA+CGG - chr4_1:82951620-82951639 None:intergenic 40.0%
! CGACTTTTCTCTCTCTTCAA+TGG + chr4_1:82951621-82951640 Msa0578410:five_prime_UTR 40.0%
CTTGTGGAGGTAGTTGAAAT+GGG - chr4_1:82951671-82951690 None:intergenic 40.0%
GGAAAAAATGAAGCTTGTGG+AGG - chr4_1:82951684-82951703 None:intergenic 40.0%
ACAACAACAACAACCCAAGA+AGG + chr4_1:82951802-82951821 Msa0578410:CDS 40.0%
CTGAAACTGGTAAACCTTCT+TGG - chr4_1:82951819-82951838 None:intergenic 40.0%
CAATGGTTCCGAAGAAGAAA+TGG + chr4_1:82951845-82951864 Msa0578410:CDS 40.0%
! GCCTTTATTTGTAGCACTTG+TGG + chr4_1:82951879-82951898 Msa0578410:CDS 40.0%
TGTAGCACTTGTGGTTATTG+CGG + chr4_1:82951888-82951907 Msa0578410:CDS 40.0%
!!! GTTTTTGGGTAGGTTGGATA+TGG + chr4_1:82951918-82951937 Msa0578410:CDS 40.0%
! GTGGTTGAAGGTGATGATTT+TGG + chr4_1:82951988-82952007 Msa0578410:CDS 40.0%
!!! GATTTTGGGTTAGAGACAGT+TGG + chr4_1:82952003-82952022 Msa0578410:CDS 40.0%
TCAGCTCCAGAAACAAAAAC+AGG - chr4_1:82952123-82952142 None:intergenic 40.0%
!!! TTTTGTTTCTGGAGCTGAAC+AGG + chr4_1:82952125-82952144 Msa0578410:CDS 40.0%
!! GCAAATTTGTGTTTGGTGTC+TGG + chr4_1:82952236-82952255 Msa0578410:intron 40.0%
AAAGTCTATAGCTCACCATC+AGG - chr4_1:82952449-82952468 None:intergenic 40.0%
!!! ATCACGCGTTTTTTATCTGC+AGG + chr4_1:82952472-82952491 Msa0578410:intron 40.0%
GAATGGAAGTCATGTTCAGT+GGG + chr4_1:82952698-82952717 Msa0578410:CDS 40.0%
! AATTTGGGTTTAATGGGGAC+CGG + chr4_1:82952726-82952745 Msa0578410:CDS 40.0%
!! AGCAAGTGTTCTGAGATCAA+TGG + chr4_1:82952790-82952809 Msa0578410:CDS 40.0%
!! TGTTCTGAGATCAATGGAGT+CGG + chr4_1:82952796-82952815 Msa0578410:CDS 40.0%
TAGTTCCATGGAAATGTGTG+GGG + chr4_1:82953113-82953132 Msa0578410:intron 40.0%
! GGGTAATGCAGAAACTTTTG+TGG + chr4_1:82953133-82953152 Msa0578410:intron 40.0%
TGATTAGCACTCGCAATGAA+AGG - chr4_1:82953238-82953257 None:intergenic 40.0%
CTTTGTCATTGTCTACTAGG+AGG + chr4_1:82953383-82953402 Msa0578410:intron 40.0%
TTGTCATTGTCTACTAGGAG+GGG + chr4_1:82953385-82953404 Msa0578410:intron 40.0%
GCCCATGAAAAATATCCAAC+AGG - chr4_1:82953451-82953470 None:intergenic 40.0%
GAAATTTCGAGCACCACAAT+TGG - chr4_1:82953539-82953558 None:intergenic 40.0%
! AACATCTCGATCGACTCTTA+TGG + chr4_1:82953592-82953611 Msa0578410:CDS 40.0%
AGTTGTCATAGGAATCGTGA+TGG + chr4_1:82953616-82953635 Msa0578410:CDS 40.0%
TTTGAAAGAATTGGTGGGGT+TGG + chr4_1:82954286-82954305 Msa0578410:intron 40.0%
! TTTTGTCACAGTGGACAAAC+TGG + chr4_1:82954591-82954610 Msa0578410:intron 40.0%
GCTAAATTTGTAGCGCGTTA+GGG - chr4_1:82954620-82954639 None:intergenic 40.0%
AGCTAAATTTGTAGCGCGTT+AGG - chr4_1:82954621-82954640 None:intergenic 40.0%
CATTCTGTGAATGAGCTTTG+AGG + chr4_1:82955131-82955150 Msa0578410:intron 40.0%
! GGTGGAAAATTTTATAGCGG+GGG + chr4_1:82955370-82955389 Msa0578410:intron 40.0%
!! GAAAATTTTATAGCGGGGGT+TGG + chr4_1:82955374-82955393 Msa0578410:intron 40.0%
! GTTTTCTGCTAGGTATCTCA+TGG - chr4_1:82955595-82955614 None:intergenic 40.0%
!! AGGGCTTTGAAAGAATCAGA+TGG - chr4_1:82955911-82955930 None:intergenic 40.0%
TGATTCTTTCAAAGCCCTTG+TGG + chr4_1:82955913-82955932 Msa0578410:CDS 40.0%
TTTCAAAGCCCTTGTGGATA+TGG + chr4_1:82955919-82955938 Msa0578410:CDS 40.0%
TTCCTTCTCTCTACTCTTTG+TGG - chr4_1:82955984-82956003 None:intergenic 40.0%
AGAAAGGGGAACATTTGAGA+TGG + chr4_1:82956081-82956100 Msa0578410:CDS 40.0%
AGATGGAGTCCATTTACTTG+AGG + chr4_1:82956098-82956117 Msa0578410:CDS 40.0%
ATGGCATCTCTTGGTTTCTT+TGG + chr4_1:82956250-82956269 Msa0578410:intron 40.0%
CCATACAGGAACATGATTCA+GGG - chr4_1:82956914-82956933 None:intergenic 40.0%
TCCATACAGGAACATGATTC+AGG - chr4_1:82956915-82956934 None:intergenic 40.0%
!!! TCGCCACCTTTTAGAATTTG+AGG - chr4_1:82956949-82956968 None:intergenic 40.0%
TTATACCTTCCAGTTCAACG+GGG + chr4_1:82957023-82957042 Msa0578410:CDS 40.0%
AATGAGTATGACCATGGAGT+CGG + chr4_1:82957189-82957208 Msa0578410:three_prime_UTR 40.0%
TTGTAATGCCTACCCTACTT+TGG + chr4_1:82957219-82957238 Msa0578410:three_prime_UTR 40.0%
AATGTAAATCCCCGATGAGT+TGG - chr4_1:82957245-82957264 None:intergenic 40.0%
TTGTCCAACTTGTAACTGTC+TGG - chr4_1:82957369-82957388 None:intergenic 40.0%
! CAAGTTGGACAACAAGATTG+TGG + chr4_1:82957377-82957396 Msa0578410:three_prime_UTR 40.0%
! ACAGTTGATGTGCACCTGAT+AGG + chr4_1:82951307-82951326 Msa0578410:five_prime_UTR 45.0%
GCTTGTGGAGGTAGTTGAAA+TGG - chr4_1:82951672-82951691 None:intergenic 45.0%
! TATTGCGGAGATCGCGTTTT+TGG + chr4_1:82951903-82951922 Msa0578410:CDS 45.0%
! ATTGCGGAGATCGCGTTTTT+GGG + chr4_1:82951904-82951923 Msa0578410:CDS 45.0%
TATGGCTAAGAACGCAGCTA+TGG + chr4_1:82951936-82951955 Msa0578410:CDS 45.0%
!! TGGTTGCTGACTTGTTCTAC+CGG + chr4_1:82951956-82951975 Msa0578410:CDS 45.0%
! TTTGGGTTAGAGACAGTTGG+TGG + chr4_1:82952006-82952025 Msa0578410:CDS 45.0%
AGAGAGAAACTTGTGAGGAG+TGG + chr4_1:82952049-82952068 Msa0578410:CDS 45.0%
AGAAACTTGTGAGGAGTGGT+TGG + chr4_1:82952053-82952072 Msa0578410:CDS 45.0%
GGAATGGAAGTCATGTTCAG+TGG + chr4_1:82952697-82952716 Msa0578410:intron 45.0%
TGCAGAGAACAATCTTGCCA+TGG + chr4_1:82952829-82952848 Msa0578410:CDS 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - chr4_1:82953058-82953077 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - chr4_1:82953059-82953078 None:intergenic 45.0%
CATTACCCCACACATTTCCA+TGG - chr4_1:82953121-82953140 None:intergenic 45.0%
! ATGGGCTGAGTATGACATCA+TGG + chr4_1:82953465-82953484 Msa0578410:CDS 45.0%
! CATAGGAATCGTGATGGAAG+AGG + chr4_1:82953622-82953641 Msa0578410:CDS 45.0%
ATACGGAGGAACAAAGTCAC+TGG + chr4_1:82953750-82953769 Msa0578410:intron 45.0%
TACGGAGGAACAAAGTCACT+GGG + chr4_1:82953751-82953770 Msa0578410:intron 45.0%
CTGGGTTGTAGATCGTAACA+TGG + chr4_1:82953769-82953788 Msa0578410:intron 45.0%
AAAGTCTGGACTACTGATGC+AGG - chr4_1:82954147-82954166 None:intergenic 45.0%
CAGTAGTCCAGACTTTCTGT+TGG + chr4_1:82954151-82954170 Msa0578410:intron 45.0%
TTCTGCACCAACAGAAAGTC+TGG - chr4_1:82954161-82954180 None:intergenic 45.0%
!! TTTTTCCAGTCGCTTGTTGC+TGG + chr4_1:82954685-82954704 Msa0578410:CDS 45.0%
TGTTGTAGGAACTATCCCTG+TGG + chr4_1:82955476-82955495 Msa0578410:intron 45.0%
TGCTAGGTATCTCATGGACT+TGG - chr4_1:82955589-82955608 None:intergenic 45.0%
! ATGCTTCAGGGTTTTCTGCT+AGG - chr4_1:82955605-82955624 None:intergenic 45.0%
ATACGAGAGGGATGCAGAAA+AGG - chr4_1:82955689-82955708 None:intergenic 45.0%
CTGGGCATCTTGAGCTTATT+TGG + chr4_1:82955789-82955808 Msa0578410:intron 45.0%
TACAGCTGCCATATCCACAA+GGG - chr4_1:82955930-82955949 None:intergenic 45.0%
TTGTGGCCAAGTGAATGCAA+AGG - chr4_1:82955967-82955986 None:intergenic 45.0%
AAGGTCGCTTCTTGAAGTCT+GGG - chr4_1:82956015-82956034 None:intergenic 45.0%
CAGAGTCAGATGACTCTGTT+TGG + chr4_1:82956327-82956346 Msa0578410:intron 45.0%
! TCAGACTTCAGAGCATCTCT+TGG + chr4_1:82956399-82956418 Msa0578410:intron 45.0%
! AGAGCATCTCTTGGTTTCTC+TGG + chr4_1:82956408-82956427 Msa0578410:intron 45.0%
AGAGTCAGATGACCCTGTTT+GGG + chr4_1:82956486-82956505 Msa0578410:intron 45.0%
! GTTATTTCCACAAGCTCTCC+AGG - chr4_1:82956623-82956642 None:intergenic 45.0%
CGTAAGAACAGCAGTCTTGA+AGG - chr4_1:82956881-82956900 None:intergenic 45.0%
CCCTGAATCATGTTCCTGTA+TGG + chr4_1:82956911-82956930 Msa0578410:CDS 45.0%
AATCAACATCCCCGTTGAAC+TGG - chr4_1:82957035-82957054 None:intergenic 45.0%
! GCATTTCTTTTCGTCGACGG+AGG + chr4_1:82951570-82951589 Msa0578410:five_prime_UTR 50.0%
!!! GATCGCGTTTTTGGGTAGGT+TGG + chr4_1:82951912-82951931 Msa0578410:CDS 50.0%
CAAATGCAGCCTCAGGTTTC+CGG - chr4_1:82952748-82952767 None:intergenic 50.0%
! TTTGGCTTACCTCAGCAAGC+TGG + chr4_1:82952764-82952783 Msa0578410:CDS 50.0%
ACAATCTTGCCATGGCACGA+CGG + chr4_1:82952837-82952856 Msa0578410:CDS 50.0%
CTTATCCCACTAAGTGGGGT+CGG - chr4_1:82953054-82953073 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - chr4_1:82953060-82953079 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG + chr4_1:82953057-82953076 Msa0578410:intron 50.0%
! CTCGCAATGAAAGGTACACC+TGG - chr4_1:82953229-82953248 None:intergenic 50.0%
AGGGACGTCAGATGATAGAC+TGG - chr4_1:82953431-82953450 None:intergenic 50.0%
CTATCATCTGACGTCCCTGT+TGG + chr4_1:82953433-82953452 Msa0578410:CDS 50.0%
TGCTTTCTGATGAGTGCCAC+TGG + chr4_1:82953843-82953862 Msa0578410:intron 50.0%
! CTACCATGCTTTAGGTCCAG+TGG - chr4_1:82953862-82953881 None:intergenic 50.0%
CACTGGACCTAAAGCATGGT+AGG + chr4_1:82953860-82953879 Msa0578410:intron 50.0%
GTGTGCTCCTACCATGCTTT+AGG - chr4_1:82953870-82953889 None:intergenic 50.0%
TGCAGGAACCCAAGAAGGAA+AGG - chr4_1:82954130-82954149 None:intergenic 50.0%
ACTGATGCAGGAACCCAAGA+AGG - chr4_1:82954135-82954154 None:intergenic 50.0%
GGAACTATCCCTGTGGTTGT+TGG + chr4_1:82955483-82955502 Msa0578410:intron 50.0%
TTGGAGGACCAACAACCACA+GGG - chr4_1:82955494-82955513 None:intergenic 50.0%
TTTGGAGGACCAACAACCAC+AGG - chr4_1:82955495-82955514 None:intergenic 50.0%
GTACAGCTGCCATATCCACA+AGG - chr4_1:82955931-82955950 None:intergenic 50.0%
TTGCCGCCTTTGCATTCACT+TGG + chr4_1:82955958-82955977 Msa0578410:CDS 50.0%
TGGCCAAGTGAATGCAAAGG+CGG - chr4_1:82955964-82955983 None:intergenic 50.0%
GGCCACAAAGAGTAGAGAGA+AGG + chr4_1:82955979-82955998 Msa0578410:CDS 50.0%
CAAGGTCGCTTCTTGAAGTC+TGG - chr4_1:82956016-82956035 None:intergenic 50.0%
CAGAGTCAGATGACCCTGTT+TGG + chr4_1:82956485-82956504 Msa0578410:intron 50.0%
AAGCTATCCTGGAGAGCTTG+TGG + chr4_1:82956613-82956632 Msa0578410:intron 50.0%
GGTCTTTCAGGCTTCCATAC+AGG - chr4_1:82956928-82956947 None:intergenic 50.0%
AACATCCCCGTTGAACTGGA+AGG - chr4_1:82957031-82957050 None:intergenic 50.0%
! TGAGTTGGCCAAAGTAGGGT+AGG - chr4_1:82957230-82957249 None:intergenic 50.0%
! CCGATGAGTTGGCCAAAGTA+GGG - chr4_1:82957234-82957253 None:intergenic 50.0%
CCCTACTTTGGCCAACTCAT+CGG + chr4_1:82957231-82957250 Msa0578410:three_prime_UTR 50.0%
CCTACTTTGGCCAACTCATC+GGG + chr4_1:82957232-82957251 Msa0578410:three_prime_UTR 50.0%
CTACTTTGGCCAACTCATCG+GGG + chr4_1:82957233-82957252 Msa0578410:three_prime_UTR 50.0%
!!! CGGAGATCGCGTTTTTGGGT+AGG + chr4_1:82951908-82951927 Msa0578410:CDS 55.0%
CTTGTTCTACCGGTCACGTG+CGG + chr4_1:82951966-82951985 Msa0578410:CDS 55.0%
TGAGGAGTGGTTGGAGAGAG+AGG + chr4_1:82952062-82952081 Msa0578410:CDS 55.0%
TAATGGGGACCGGAAACCTG+AGG + chr4_1:82952736-82952755 Msa0578410:CDS 55.0%
CGGAAACCTGAGGCTGCATT+TGG + chr4_1:82952746-82952765 Msa0578410:CDS 55.0%
GGTAAGCCAAATGCAGCCTC+AGG - chr4_1:82952755-82952774 None:intergenic 55.0%
!! CTTGCTGTTCCAGCTTGCTG+AGG - chr4_1:82952776-82952795 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG - chr4_1:82953046-82953065 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG + chr4_1:82953045-82953064 Msa0578410:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG + chr4_1:82953046-82953065 Msa0578410:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG + chr4_1:82953052-82953071 Msa0578410:intron 55.0%
GGGCTTCGAGAGCTTGCAAT+CGG - chr4_1:82953561-82953580 None:intergenic 55.0%
! GTGCCACTGGACCTAAAGCA+TGG + chr4_1:82953856-82953875 Msa0578410:intron 55.0%
CCATACCAGCAACAAGCGAC+TGG - chr4_1:82954693-82954712 None:intergenic 55.0%
! CCAGTCGCTTGTTGCTGGTA+TGG + chr4_1:82954690-82954709 Msa0578410:intron 55.0%
GACCTTGCAAGTGCACTCGA+GGG + chr4_1:82956029-82956048 Msa0578410:CDS 55.0%
GTATGACCATGGAGTCGGCA+TGG + chr4_1:82957194-82957213 Msa0578410:three_prime_UTR 55.0%
!! ACAAAGCCATGCCGACTCCA+TGG - chr4_1:82957203-82957222 None:intergenic 55.0%
! CCCGATGAGTTGGCCAAAGT+AGG - chr4_1:82957235-82957254 None:intergenic 55.0%
CTTCAACCACCGCACGTGAC+CGG - chr4_1:82951978-82951997 None:intergenic 60.0%
ATCTTGCCATGGCACGACGG+TGG + chr4_1:82952840-82952859 Msa0578410:CDS 60.0%
TCTTGCCATGGCACGACGGT+GGG + chr4_1:82952841-82952860 Msa0578410:CDS 60.0%
CGACCTTGCAAGTGCACTCG+AGG + chr4_1:82956028-82956047 Msa0578410:CDS 60.0%
GACCCTCGAGTGCACTTGCA+AGG - chr4_1:82956034-82956053 None:intergenic 60.0%
GTTCTACCGGTCACGTGCGG+TGG + chr4_1:82951969-82951988 Msa0578410:CDS 65.0%
CGGTCACGTGCGGTGGTTGA+AGG + chr4_1:82951976-82951995 Msa0578410:CDS 65.0%
GCTTACCCACCGTCGTGCCA+TGG - chr4_1:82952849-82952868 None:intergenic 65.0%
ACCCTGCGGGCTTGACACAG+AGG + chr4_1:82956992-82957011 Msa0578410:CDS 65.0%
GCCTCTGTGTCAAGCCCGCA+GGG - chr4_1:82956996-82957015 None:intergenic 65.0%
TGCCTCTGTGTCAAGCCCGC+AGG - chr4_1:82956997-82957016 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 82951214 82957492 82951214 ID=Msa0578410;Name=Msa0578410
chr4_1 mRNA 82951214 82957492 82951214 ID=Msa0578410-mRNA-1;Parent=Msa0578410;Name=Msa0578410-mRNA-1;_AED=0.06;_eAED=0.06;_QI=564|0.71|0.75|0.87|1|1|8|382|521
chr4_1 exon 82951214 82952146 82951214 ID=Msa0578410-mRNA-1:exon:30121;Parent=Msa0578410-mRNA-1
chr4_1 exon 82952698 82952862 82952698 ID=Msa0578410-mRNA-1:exon:30122;Parent=Msa0578410-mRNA-1
chr4_1 exon 82953186 82953229 82953186 ID=Msa0578410-mRNA-1:exon:30123;Parent=Msa0578410-mRNA-1
chr4_1 exon 82953402 82953643 82953402 ID=Msa0578410-mRNA-1:exon:30124;Parent=Msa0578410-mRNA-1
chr4_1 exon 82954602 82954706 82954602 ID=Msa0578410-mRNA-1:exon:30125;Parent=Msa0578410-mRNA-1
chr4_1 exon 82955484 82955640 82955484 ID=Msa0578410-mRNA-1:exon:30126;Parent=Msa0578410-mRNA-1
chr4_1 exon 82955892 82956119 82955892 ID=Msa0578410-mRNA-1:exon:30127;Parent=Msa0578410-mRNA-1
chr4_1 exon 82956855 82957492 82956855 ID=Msa0578410-mRNA-1:exon:30128;Parent=Msa0578410-mRNA-1
chr4_1 five_prime_UTR 82951214 82951777 82951214 ID=Msa0578410-mRNA-1:five_prime_utr;Parent=Msa0578410-mRNA-1
chr4_1 CDS 82951778 82952146 82951778 ID=Msa0578410-mRNA-1:cds;Parent=Msa0578410-mRNA-1
chr4_1 CDS 82952698 82952862 82952698 ID=Msa0578410-mRNA-1:cds;Parent=Msa0578410-mRNA-1
chr4_1 CDS 82953186 82953229 82953186 ID=Msa0578410-mRNA-1:cds;Parent=Msa0578410-mRNA-1
chr4_1 CDS 82953402 82953643 82953402 ID=Msa0578410-mRNA-1:cds;Parent=Msa0578410-mRNA-1
chr4_1 CDS 82954602 82954706 82954602 ID=Msa0578410-mRNA-1:cds;Parent=Msa0578410-mRNA-1
chr4_1 CDS 82955484 82955640 82955484 ID=Msa0578410-mRNA-1:cds;Parent=Msa0578410-mRNA-1
chr4_1 CDS 82955892 82956119 82955892 ID=Msa0578410-mRNA-1:cds;Parent=Msa0578410-mRNA-1
chr4_1 CDS 82956855 82957110 82956855 ID=Msa0578410-mRNA-1:cds;Parent=Msa0578410-mRNA-1
chr4_1 three_prime_UTR 82957111 82957492 82957111 ID=Msa0578410-mRNA-1:three_prime_utr;Parent=Msa0578410-mRNA-1
Gene Sequence

>Msa0578410

ATGGGTCTCGTTTCAAGAACAACAACAACAACAACAACCCAAGAAGGTTTACCAGTTTCAGTTTCAACAATGGTTCCGAAGAAGAAATGGTCGAATTTAATGCCTTTATTTGTAGCACTTGTGGTTATTGCGGAGATCGCGTTTTTGGGTAGGTTGGATATGGCTAAGAACGCAGCTATGGTTGCTGACTTGTTCTACCGGTCACGTGCGGTGGTTGAAGGTGATGATTTTGGGTTAGAGACAGTTGGTGGTGATAAGAATTTGGAATTAGAGAGAGAAACTTGTGAGGAGTGGTTGGAGAGAGAGGATGCTGTTACATATTCAAGGAACTTTAATAAGGAACCTGTTTTTGTTTCTGGAGCTGAACAGGAATGGAAGTCATGTTCAGTGGGATGTAAATTTGGGTTTAATGGGGACCGGAAACCTGAGGCTGCATTTGGCTTACCTCAGCAAGCTGGAACAGCAAGTGTTCTGAGATCAATGGAGTCGGCACAATACTATGCAGAGAACAATCTTGCCATGGCACGACGGTGGCAATATGAATATCTTCTCTCATTTTTGACTGGATTTAAAACCAGGAGGGGATATCACATTGTAATGACAACCAGTCTATCATCTGACGTCCCTGTTGGATATTTTTCATGGGCTGAGTATGACATCATGGCACCGATAAAGCCAAAAACTGAAAAAGCTCTTGCAGCTGCTTTTATTTCCAATTGTGGTGCTCGAAATTTCCGATTGCAAGCTCTCGAAGCCCTAGAAAAAACAAACATCTCGATCGACTCTTATGGTAGTTGTCATAGGAATCGTGATGGAAGAGTGGACAAACTGGAAACCCTAACGCGCTACAAATTTAGCTTAGCATTTGAAAATTCTAACGAGGAGGATTATGTAACTGAAAAGTTTTTCCAGTCGCTTGTTGCTGGAACTATCCCTGTGGTTGTTGGTCCTCCAAATATTCAAGATTTTGCTCCTTCTCCTGATTCATTTTTATATATCAAAGAACTAGAGGATGTTGAGTCTGTTGCCAAGTCCATGAGATACCTAGCAGAAAACCCTGAAGCATATAATCATTCATTGAGGTGGAAGTATGAAGGGCCATCTGATTCTTTCAAAGCCCTTGTGGATATGGCAGCTGTACATTCATCTTGCCGCCTTTGCATTCACTTGGCCACAAAGAGTAGAGAGAAGGAAGAGAAGAGCCCAGACTTCAAGAAGCGACCTTGCAAGTGCACTCGAGGGTCAGAAACTGTATATCATATCTATGTGAGAGAAAGGGGAACATTTGAGATGGAGTCCATTTACTTGAGATCTAGCAATTTAACTCTGGAGTCCTTCAAGACTGCTGTTCTTACGAAGTTCACGTCCCTGAATCATGTTCCTGTATGGAAGCCTGAAAGACCTCAAATTCTAAAAGGTGGCGATAAATTGAAGGTTTACAAAATATACCCTGCGGGCTTGACACAGAGGCAAGCTCTTTATACCTTCCAGTTCAACGGGGATGTTGATTTCAGAAGTCACTTGGAAAGCAATCCTTGTGCCAAGTTTGAAGTAATTTTTGTGTAG
Protein sequence

>Msa0578410

MGLVSRTTTTTTTQEGLPVSVSTMVPKKKWSNLMPLFVALVVIAEIAFLGRLDMAKNAAMVADLFYRSRAVVEGDDFGLETVGGDKNLELERETCEEWLEREDAVTYSRNFNKEPVFVSGAEQEWKSCSVGCKFGFNGDRKPEAAFGLPQQAGTASVLRSMESAQYYAENNLAMARRWQYEYLLSFLTGFKTRRGYHIVMTTSLSSDVPVGYFSWAEYDIMAPIKPKTEKALAAAFISNCGARNFRLQALEALEKTNISIDSYGSCHRNRDGRVDKLETLTRYKFSLAFENSNEEDYVTEKFFQSLVAGTIPVVVGPPNIQDFAPSPDSFLYIKELEDVESVAKSMRYLAENPEAYNHSLRWKYEGPSDSFKALVDMAAVHSSCRLCIHLATKSREKEEKSPDFKKRPCKCTRGSETVYHIYVRERGTFEMESIYLRSSNLTLESFKTAVLTKFTSLNHVPVWKPERPQILKGGDKLKVYKIYPAGLTQRQALYTFQFNGDVDFRSHLESNPCAKFEVIFV*