AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1370970

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1370970 MtrunA17_Chr1g0213671 78.544 522 74 5 1 484 1 522 0.0 806
Msa1370970 MtrunA17_Chr7g0265611 33.126 483 279 8 26 468 35 513 1.08e-86 275
Msa1370970 MtrunA17_Chr1g0160851 32.364 516 290 16 1 475 1 498 3.50e-73 239
Msa1370970 MtrunA17_Chr1g0200961 30.528 511 297 10 1 470 2 495 4.24e-72 236
Msa1370970 MtrunA17_Chr1g0205361 31.837 490 271 13 26 471 26 496 2.40e-71 234
Msa1370970 MtrunA17_Chr7g0246131 31.373 510 296 15 1 467 1 499 4.72e-69 229
Msa1370970 MtrunA17_Chr8g0355961 30.375 507 300 12 4 470 11 504 4.26e-67 224
Msa1370970 MtrunA17_Chr8g0356001 31.393 481 271 13 33 470 40 504 4.73e-67 223
Msa1370970 MtrunA17_Chr5g0395321 31.214 519 295 13 4 482 12 508 4.76e-67 224
Msa1370970 MtrunA17_Chr7g0246221 32.033 487 275 13 26 467 23 498 2.46e-66 221
Msa1370970 MtrunA17_Chr5g0395331 31.579 494 284 14 17 468 20 501 1.98e-65 219
Msa1370970 MtrunA17_Chr1g0164211 31.546 485 273 12 28 470 25 492 3.49e-65 218
Msa1370970 MtrunA17_Chr4g0039901 30.526 475 278 11 33 468 34 495 1.27e-62 212
Msa1370970 MtrunA17_Chr7g0246121 31.263 467 261 12 45 467 45 495 1.13e-60 206
Msa1370970 MtrunA17_Chr1g0205371 36.391 338 199 9 26 360 27 351 5.50e-60 204
Msa1370970 MtrunA17_Chr7g0246151 33.120 468 253 16 45 467 45 497 1.25e-59 204
Msa1370970 MtrunA17_Chr7g0246181 31.906 467 260 14 45 467 45 497 2.27e-58 200
Msa1370970 MtrunA17_Chr5g0395381 29.644 506 267 14 4 468 12 469 6.97e-57 196
Msa1370970 MtrunA17_Chr2g0310381 28.685 502 302 12 7 470 8 491 8.59e-57 196
Msa1370970 MtrunA17_Chr4g0057001 30.315 508 290 14 12 476 31 517 2.38e-56 195
Msa1370970 MtrunA17_Chr2g0314731 30.021 483 279 17 4 443 2 468 5.65e-54 188
Msa1370970 MtrunA17_Chr2g0310391 27.699 491 306 10 9 461 3 482 1.60e-53 187
Msa1370970 MtrunA17_Chr2g0314721 32.222 360 221 10 4 355 13 357 5.53e-52 183
Msa1370970 MtrunA17_Chr1g0176831 29.630 486 281 18 2 443 30 498 8.34e-51 180
Msa1370970 MtrunA17_Chr3g0116741 28.400 500 307 13 11 472 30 516 3.34e-48 173
Msa1370970 MtrunA17_Chr4g0056951 27.837 467 285 10 50 476 58 512 2.67e-47 171
Msa1370970 MtrunA17_Chr8g0344181 27.835 485 290 14 32 471 36 505 3.23e-47 171
Msa1370970 MtrunA17_Chr5g0401681 33.234 334 202 9 34 360 32 351 2.67e-46 168
Msa1370970 MtrunA17_Chr3g0116681 26.916 509 322 11 1 472 8 503 1.16e-45 166
Msa1370970 MtrunA17_Chr8g0382901 26.347 501 309 12 10 468 468 950 1.40e-45 170
Msa1370970 MtrunA17_Chr8g0382901 25.301 498 290 15 4 459 5 462 3.44e-39 151
Msa1370970 MtrunA17_Chr3g0094171 25.875 514 322 15 9 478 14 512 1.42e-44 163
Msa1370970 MtrunA17_Chr8g0344151 25.926 486 298 13 32 471 34 503 3.26e-44 162
Msa1370970 MtrunA17_Chr3g0094231 26.261 476 302 10 33 471 35 498 8.03e-44 161
Msa1370970 MtrunA17_Chr6g0484841 25.745 470 292 10 35 461 38 493 9.09e-44 161
Msa1370970 MtrunA17_Chr1g0197891 26.778 478 294 13 26 462 26 488 9.38e-44 160
Msa1370970 MtrunA17_Chr8g0390881 24.746 493 309 13 13 459 15 491 1.29e-43 160
Msa1370970 MtrunA17_Chr6g0484811 25.311 482 300 12 29 465 32 498 1.97e-43 160
Msa1370970 MtrunA17_Chr1g0197851 26.971 482 288 14 26 462 26 488 3.22e-43 159
Msa1370970 MtrunA17_Chr1g0160861 33.724 341 174 12 175 475 11 339 3.68e-43 155
Msa1370970 MtrunA17_Chr1g0197881 26.327 490 295 14 25 472 24 489 4.58e-43 159
Msa1370970 MtrunA17_Chr3g0086661 27.215 474 296 9 45 476 43 509 7.93e-43 159
Msa1370970 MtrunA17_Chr7g0255531 27.329 483 301 13 29 471 23 495 8.11e-43 158
Msa1370970 MtrunA17_Chr4g0052881 27.743 483 293 12 32 477 30 493 1.06e-42 158
Msa1370970 MtrunA17_Chr5g0430031 25.969 516 311 18 5 468 4 500 1.35e-42 158
Msa1370970 MtrunA17_Chr4g0047641 26.195 481 301 10 33 472 49 516 2.86e-42 157
Msa1370970 MtrunA17_Chr3g0086651 26.882 465 292 8 45 467 43 501 6.25e-42 156
Msa1370970 MtrunA17_Chr3g0086691 25.107 466 299 9 45 467 43 501 1.84e-41 155
Msa1370970 MtrunA17_Chr4g0061381 23.932 468 296 11 45 465 42 496 6.57e-41 153
Msa1370970 MtrunA17_Chr4g0052851 28.291 509 284 19 19 484 21 491 9.16e-41 152
Msa1370970 MtrunA17_Chr3g0101731 26.112 517 306 17 13 473 11 507 1.33e-40 152
Msa1370970 MtrunA17_Chr4g0047661 24.590 488 305 12 33 473 47 518 1.87e-40 152
Msa1370970 MtrunA17_Chr3g0101831 26.113 494 301 15 16 461 14 491 3.59e-40 151
Msa1370970 MtrunA17_Chr1g0197871 25.833 480 283 14 34 470 34 483 4.42e-40 150
Msa1370970 MtrunA17_Chr8g0357421 25.690 471 292 15 33 461 36 490 8.34e-40 150
Msa1370970 MtrunA17_Chr4g0052861 28.736 348 225 8 15 355 16 347 1.44e-39 149
Msa1370970 MtrunA17_Chr5g0430081 24.458 507 324 11 6 468 7 498 1.68e-39 149
Msa1370970 MtrunA17_Chr4g0047631 25.620 484 297 11 33 472 48 512 3.15e-39 149
Msa1370970 MtrunA17_Chr4g0047691 25.979 485 294 15 33 472 51 515 2.18e-38 146
Msa1370970 MtrunA17_Chr5g0430111 27.171 357 242 10 6 356 9 353 2.93e-38 144
Msa1370970 MtrunA17_Chr3g0101711 27.500 360 242 8 4 356 7 354 3.37e-38 145
Msa1370970 MtrunA17_Chr8g0357431 25.949 474 288 13 33 461 36 491 5.58e-38 145
Msa1370970 MtrunA17_Chr4g0058281 25.794 504 324 11 9 472 21 514 6.31e-38 145
Msa1370970 MtrunA17_Chr5g0430091 23.772 509 321 14 8 468 11 500 7.96e-38 145
Msa1370970 MtrunA17_Chr5g0430131 23.495 515 326 16 4 468 3 499 8.34e-38 144
Msa1370970 MtrunA17_Chr3g0101601 25.880 483 295 15 33 472 35 497 9.31e-38 144
Msa1370970 MtrunA17_Chr5g0401691 27.557 352 242 5 1 352 21 359 1.50e-37 144
Msa1370970 MtrunA17_Chr3g0101651 28.963 328 212 7 33 352 37 351 1.69e-37 144
Msa1370970 MtrunA17_Chr3g0101621 26.708 483 294 18 33 476 32 493 4.61e-37 142
Msa1370970 MtrunA17_Chr4g0011881 29.552 335 219 9 19 347 15 338 5.06e-37 142
Msa1370970 MtrunA17_Chr3g0101721 25.761 493 305 16 16 461 14 492 5.53e-37 142
Msa1370970 MtrunA17_Chr5g0403331 24.742 485 309 13 18 459 20 491 1.06e-36 141
Msa1370970 MtrunA17_Chr1g0156081 24.008 529 334 15 6 476 20 538 1.08e-36 142
Msa1370970 MtrunA17_Chr3g0101581 28.363 342 228 10 6 342 9 338 1.23e-36 141
Msa1370970 MtrunA17_Chr5g0430101 26.462 359 236 11 9 357 11 351 1.32e-36 141
Msa1370970 MtrunA17_Chr1g0156101 28.107 338 218 8 35 356 33 361 1.43e-36 141
Msa1370970 MtrunA17_Chr4g0053621 27.745 501 303 18 9 468 8 490 2.59e-36 140
Msa1370970 MtrunA17_Chr5g0406651 28.696 345 229 8 19 357 15 348 4.23e-36 139
Msa1370970 MtrunA17_Chr2g0296661 30.573 314 203 8 54 360 51 356 4.29e-36 140
Msa1370970 MtrunA17_Chr3g0101631 24.752 505 319 16 10 472 11 496 5.80e-36 139
Msa1370970 MtrunA17_Chr1g0174481 29.226 349 233 10 14 355 9 350 5.92e-36 139
Msa1370970 MtrunA17_Chr1g0174461 26.486 370 239 10 1 355 4 355 7.31e-36 139
Msa1370970 MtrunA17_Chr3g0101571 24.200 500 322 15 3 461 5 488 8.24e-36 139
Msa1370970 MtrunA17_Chr8g0361471 26.724 348 232 9 11 349 9 342 1.04e-35 139
Msa1370970 MtrunA17_Chr3g0101751 26.404 356 235 8 16 359 21 361 1.36e-35 138
Msa1370970 MtrunA17_Chr6g0463791 27.731 357 219 9 13 355 14 345 2.13e-35 137
Msa1370970 MtrunA17_Chr3g0101611 28.829 333 210 14 33 355 37 352 2.28e-35 137
Msa1370970 MtrunA17_Chr5g0403351 29.412 357 219 12 13 355 15 352 2.75e-35 137
Msa1370970 MtrunA17_Chr3g0101661 29.664 327 210 7 33 352 37 350 5.93e-35 137
Msa1370970 MtrunA17_Chr4g0011981 25.767 489 299 14 25 468 23 492 5.97e-35 136
Msa1370970 MtrunA17_Chr1g0176851 35.217 230 138 5 129 355 7 228 6.52e-35 130
Msa1370970 MtrunA17_Chr2g0280261 27.054 499 279 18 29 471 29 498 8.81e-35 136
Msa1370970 MtrunA17_Chr5g0445451 23.922 464 303 11 33 459 37 487 1.19e-34 135
Msa1370970 MtrunA17_Chr1g0174451 26.257 358 237 10 14 355 10 356 1.21e-34 135
Msa1370970 MtrunA17_Chr4g0011961 25.296 506 319 14 5 468 3 491 1.23e-34 135
Msa1370970 MtrunA17_Chr6g0465511 26.437 348 233 8 11 349 9 342 1.58e-34 135
Msa1370970 MtrunA17_Chr5g0446151 24.109 477 310 11 33 472 40 501 2.10e-34 135
Msa1370970 MtrunA17_Chr4g0011901 25.474 475 301 11 35 468 30 492 2.17e-34 135
Msa1370970 MtrunA17_Chr6g0463801 25.355 493 292 12 29 472 32 497 2.18e-34 135
Msa1370970 MtrunA17_Chr4g0017411 26.223 511 292 19 19 484 18 488 2.36e-34 134
Msa1370970 MtrunA17_Chr3g0101821 25.634 355 237 8 13 355 11 350 2.83e-34 134
Msa1370970 MtrunA17_Chr3g0101761 22.691 498 318 14 13 461 11 490 2.98e-34 134
Msa1370970 MtrunA17_Chr3g0101801 25.284 352 245 7 10 355 18 357 3.69e-34 134
Msa1370970 MtrunA17_Chr6g0466331 26.149 348 234 8 11 349 9 342 4.43e-34 134
Msa1370970 MtrunA17_Chr8g0344191 26.225 347 241 7 13 355 51 386 5.84e-34 134
Msa1370970 MtrunA17_Chr4g0020041 27.809 356 214 9 3 341 8 337 7.56e-34 133
Msa1370970 MtrunA17_Chr3g0101701 27.190 331 220 7 33 355 37 354 9.86e-34 133
Msa1370970 MtrunA17_Chr5g0445441 23.431 478 288 11 33 459 78 528 1.01e-33 133
Msa1370970 MtrunA17_Chr4g0011871 26.439 469 291 13 35 461 30 486 1.20e-33 132
Msa1370970 MtrunA17_Chr3g0101671 24.277 519 309 14 10 470 11 503 1.22e-33 133
Msa1370970 MtrunA17_Chr5g0446161 24.109 477 309 11 33 472 40 500 1.68e-33 132
Msa1370970 MtrunA17_Chr5g0445461 25.847 472 288 14 33 461 37 489 1.77e-33 132
Msa1370970 MtrunA17_Chr1g0174471 27.684 354 237 9 14 355 25 371 3.14e-33 132
Msa1370970 MtrunA17_Chr7g0254641 23.124 493 320 12 32 475 35 517 3.25e-33 132
Msa1370970 MtrunA17_Chr1g0162801 27.500 360 233 9 6 355 11 352 3.87e-33 131
Msa1370970 MtrunA17_Chr4g0058201 24.180 488 303 13 33 473 27 494 3.99e-33 131
Msa1370970 MtrunA17_Chr3g0101811 25.049 515 300 18 13 461 11 505 4.06e-33 131
Msa1370970 MtrunA17_Chr4g0011921 24.851 503 323 13 8 468 3 492 4.50e-33 131
Msa1370970 MtrunA17_Chr4g0076161 25.967 362 232 12 9 355 8 348 6.55e-33 130
Msa1370970 MtrunA17_Chr4g0058231 25.103 486 286 14 35 465 29 491 9.62e-33 130
Msa1370970 MtrunA17_Chr5g0405001 23.868 486 305 12 35 473 45 512 9.86e-33 130
Msa1370970 MtrunA17_Chr8g0372251 27.515 338 211 7 35 356 36 355 1.10e-32 130
Msa1370970 MtrunA17_Chr5g0403321 27.859 341 218 9 30 356 30 356 1.43e-32 130
Msa1370970 MtrunA17_Chr2g0304871 26.104 521 322 16 1 471 5 512 2.51e-32 129
Msa1370970 MtrunA17_Chr5g0419691 26.170 470 290 13 35 461 30 485 7.60e-32 127
Msa1370970 MtrunA17_Chr3g0101691 28.743 334 217 10 27 352 31 351 7.65e-32 127
Msa1370970 MtrunA17_Chr4g0035921 24.395 496 306 15 25 468 31 509 7.75e-32 128
Msa1370970 MtrunA17_Chr8g0362701 24.183 459 296 13 55 471 55 503 1.41e-31 127
Msa1370970 MtrunA17_Chr4g0058261 30.267 337 205 13 32 355 61 380 1.75e-31 127
Msa1370970 MtrunA17_Chr7g0258221 24.708 514 332 15 1 471 2 503 3.03e-31 126
Msa1370970 MtrunA17_Chr4g0008101 25.761 493 303 16 33 471 38 521 4.35e-31 125
Msa1370970 MtrunA17_Chr2g0296651 27.322 366 232 10 4 355 2 347 4.48e-31 125
Msa1370970 MtrunA17_Chr4g0039391 25.541 462 285 10 53 471 53 498 8.22e-31 125
Msa1370970 MtrunA17_Chr4g0030701 28.779 344 221 10 25 355 26 358 4.48e-30 123
Msa1370970 MtrunA17_Chr8g0339311 25.568 528 321 21 3 471 6 520 5.29e-30 122
Msa1370970 MtrunA17_Chr5g0445381 23.109 476 316 8 33 471 68 530 5.57e-30 122
Msa1370970 MtrunA17_Chr3g0084921 26.849 365 243 10 2 355 6 357 5.76e-30 122
Msa1370970 MtrunA17_Chr6g0451641 25.208 361 251 11 11 359 16 369 1.59e-29 121
Msa1370970 MtrunA17_Chr1g0174441 26.575 365 248 12 1 355 23 377 1.72e-29 121
Msa1370970 MtrunA17_Chr1g0198191 26.171 363 246 11 3 356 15 364 2.16e-29 120
Msa1370970 MtrunA17_Chr7g0218601 25.107 466 287 16 34 455 34 481 3.32e-29 120
Msa1370970 MtrunA17_Chr5g0431501 27.711 332 219 8 34 356 33 352 5.52e-29 119
Msa1370970 MtrunA17_Chr5g0431461 27.711 332 219 8 34 356 33 352 5.52e-29 119
Msa1370970 MtrunA17_Chr6g0451741 24.053 528 326 21 6 471 29 543 6.31e-29 119
Msa1370970 MtrunA17_Chr4g0058191 24.017 483 302 13 37 474 28 490 7.63e-29 119
Msa1370970 MtrunA17_Chr7g0235551 23.985 517 330 18 6 472 4 507 9.30e-29 119
Msa1370970 MtrunA17_Chr8g0362481 23.831 449 280 12 70 471 1 434 1.05e-28 118
Msa1370970 MtrunA17_Chr5g0431641 24.101 473 291 14 33 459 37 487 1.20e-28 118
Msa1370970 MtrunA17_Chr6g0451691 24.303 502 316 15 25 472 35 526 1.35e-28 119
Msa1370970 MtrunA17_Chr5g0445421 22.845 464 285 9 33 458 111 539 6.58e-28 117
Msa1370970 MtrunA17_Chr7g0224561 28.916 332 210 8 33 354 30 345 6.74e-28 116
Msa1370970 MtrunA17_Chr6g0451751 24.390 492 311 16 33 472 40 522 7.93e-28 116
Msa1370970 MtrunA17_Chr5g0445531 22.718 471 297 11 34 459 38 486 9.61e-28 115
Msa1370970 MtrunA17_Chr1g0167321 27.195 353 211 11 10 341 8 335 1.13e-27 115
Msa1370970 MtrunA17_Chr1g0162811 25.000 340 236 9 9 341 9 336 1.29e-27 115
Msa1370970 MtrunA17_Chr6g0451781 24.902 510 302 18 25 471 63 554 2.12e-27 115
Msa1370970 MtrunA17_Chr7g0218611 26.524 328 227 7 34 356 33 351 2.74e-27 114
Msa1370970 MtrunA17_Chr7g0224551 28.701 331 210 8 34 354 31 345 2.92e-27 114
Msa1370970 MtrunA17_Chr5g0431511 27.219 338 213 11 34 356 33 352 3.40e-27 114
Msa1370970 MtrunA17_Chr3g0101741 24.276 449 269 17 70 471 1 425 3.44e-27 113
Msa1370970 MtrunA17_Chr6g0472311 22.790 509 339 14 10 472 17 517 1.35e-26 112
Msa1370970 MtrunA17_Chr6g0466941 26.757 370 245 13 7 359 10 370 1.47e-26 112
Msa1370970 MtrunA17_Chr6g0458561 24.023 512 330 14 7 471 26 525 1.58e-26 112
Msa1370970 MtrunA17_Chr4g0024771 23.242 327 237 5 35 359 39 353 3.29e-26 111
Msa1370970 MtrunA17_Chr4g0030711 25.723 311 211 7 56 354 58 360 3.70e-26 111
Msa1370970 MtrunA17_Chr3g0082701 23.387 496 316 14 41 481 46 532 6.72e-26 110
Msa1370970 MtrunA17_Chr8g0339331 26.627 338 226 11 35 359 39 367 7.92e-25 107
Msa1370970 MtrunA17_Chr5g0431671 21.884 329 242 5 34 359 38 354 1.94e-24 106
Msa1370970 MtrunA17_Chr1g0207841 25.962 312 210 7 56 354 59 362 2.13e-24 106
Msa1370970 MtrunA17_Chr7g0258211 25.731 342 228 12 45 376 50 375 2.49e-24 105
Msa1370970 MtrunA17_Chr4g0011931 26.950 282 189 9 9 285 7 276 6.31e-24 101
Msa1370970 MtrunA17_Chr4g0011861 26.357 258 177 5 35 287 30 279 2.59e-23 100
Msa1370970 MtrunA17_Chr4g0046631 27.193 342 224 10 27 355 38 367 4.79e-23 102
Msa1370970 MtrunA17_Chr4g0046351 22.659 331 234 7 35 357 35 351 7.29e-23 101
Msa1370970 MtrunA17_Chr4g0046331 22.961 331 233 7 35 357 35 351 9.12e-23 101
Msa1370970 MtrunA17_Chr6g0477081 32.086 187 109 3 173 355 7 179 1.34e-22 96.7
Msa1370970 MtrunA17_Chr6g0466901 24.931 361 239 12 7 348 10 357 2.17e-22 100
Msa1370970 MtrunA17_Chr5g0445751 27.875 287 191 6 34 319 44 315 4.02e-22 97.1
Msa1370970 MtrunA17_Chr8g0370641 25.397 378 246 13 1 354 1 366 9.50e-22 98.2
Msa1370970 MtrunA17_Chr8g0351801 27.097 310 210 7 56 355 55 358 2.67e-21 97.1
Msa1370970 MtrunA17_Chr5g0419451 25.460 326 220 9 36 356 62 369 3.88e-21 96.3
Msa1370970 MtrunA17_Chr1g0200951 26.163 344 220 10 25 355 52 374 4.30e-21 96.3
Msa1370970 MtrunA17_Chr8g0370651 24.740 384 245 14 1 354 1 370 7.99e-21 95.5
Msa1370970 MtrunA17_Chr5g0430171 29.012 162 112 3 8 169 11 169 1.52e-20 90.5
Msa1370970 MtrunA17_Chr4g0046691 27.273 253 166 7 35 282 40 279 2.41e-20 91.7
Msa1370970 MtrunA17_Chr4g0046321 20.721 333 238 7 35 357 35 351 4.39e-20 93.2
Msa1370970 MtrunA17_Chr4g0030741 25.979 281 186 6 56 330 85 349 2.20e-19 89.7
Msa1370970 MtrunA17_Chr3g0107611 22.874 341 239 10 33 357 49 381 5.27e-19 89.7
Msa1370970 MtrunA17_Chr6g0463611 24.399 291 180 9 13 288 28 293 7.60e-19 87.4
Msa1370970 MtrunA17_Chr5g0402971 25.253 297 204 9 25 307 28 320 1.98e-18 86.3
Msa1370970 MtrunA17_Chr1g0174421 26.481 287 196 8 33 313 46 323 2.07e-18 86.3
Msa1370970 MtrunA17_Chr2g0314771 30.952 168 105 5 70 234 1 160 2.07e-17 79.7
Msa1370970 MtrunA17_Chr2g0310371 34.899 149 87 4 7 155 8 146 2.86e-17 78.6
Msa1370970 MtrunA17_Chr5g0430071 22.789 294 182 6 217 468 63 353 1.72e-16 80.9
Msa1370970 MtrunA17_Chr1g0156061 31.818 132 88 1 35 166 56 185 3.13e-16 80.9
Msa1370970 MtrunA17_Chr5g0432751 22.523 333 236 7 33 355 32 352 4.40e-16 80.9
Msa1370970 MtrunA17_Chr6g0451801 25.974 308 205 10 11 300 14 316 4.88e-16 79.3
Msa1370970 MtrunA17_Chr8g0346261 23.853 327 231 7 36 359 86 397 5.46e-16 80.5
Msa1370970 MtrunA17_Chr2g0334021 21.148 331 240 6 28 348 27 346 1.49e-15 79.0
Msa1370970 MtrunA17_Chr5g0445411 33.077 130 84 2 33 161 44 171 2.52e-15 73.9
Msa1370970 MtrunA17_Chr1g0210091 22.188 320 226 9 45 355 76 381 7.27e-15 77.0
Msa1370970 MtrunA17_Chr4g0046671 26.255 259 172 7 35 282 45 295 9.48e-15 75.1
Msa1370970 MtrunA17_Chr5g0409051 24.251 367 241 13 10 356 8 357 1.23e-14 76.3
Msa1370970 MtrunA17_Chr5g0430051 33.019 106 66 2 1 102 1 105 1.52e-14 70.1
Msa1370970 MtrunA17_Chr5g0431631 30.714 140 93 4 9 146 24 161 1.72e-14 71.2
Msa1370970 MtrunA17_Chr3g0107541 22.333 300 208 8 69 355 87 374 9.30e-14 73.6
Msa1370970 MtrunA17_Chr3g0116721 24.615 195 134 5 145 333 3 190 2.87e-13 68.6
Msa1370970 MtrunA17_Chr8g0377341 23.263 331 219 10 37 355 70 377 4.19e-13 71.6
Msa1370970 MtrunA17_Chr8g0364651 24.513 359 237 11 13 356 8 347 6.55e-13 70.9
Msa1370970 MtrunA17_Chr5g0413911 23.442 337 236 8 33 352 41 372 2.08e-12 69.3
Msa1370970 MtrunA17_Chr5g0445541 36.264 91 57 1 13 102 17 107 5.32e-12 63.2
Msa1370970 MtrunA17_Chr3g0117321 31.405 121 80 2 33 153 6 123 6.65e-12 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1370970 AT3G52970.1 50.781 512 205 11 6 475 10 516 1.31e-156 455
Msa1370970 AT3G52970.2 49.714 525 205 12 6 475 10 530 8.96e-154 448
Msa1370970 AT2G45550.1 32.091 483 267 11 34 470 38 505 2.36e-68 227
Msa1370970 AT2G45560.1 31.546 485 277 10 34 475 38 510 1.12e-66 223
Msa1370970 AT1G33720.1 31.733 479 276 12 35 473 39 506 2.54e-64 217
Msa1370970 AT2G45570.1 31.847 471 271 10 45 474 49 510 3.34e-64 216
Msa1370970 AT3G61040.1 29.253 482 282 11 31 470 30 494 1.82e-58 201
Msa1370970 AT2G45580.1 28.571 483 281 12 45 480 49 514 7.96e-54 189
Msa1370970 AT3G61040.2 32.515 326 208 6 31 355 30 344 9.49e-51 177
Msa1370970 AT2G45580.3 31.250 320 205 6 45 357 49 360 3.80e-48 171
Msa1370970 AT4G12320.1 27.327 505 308 12 9 471 22 509 3.31e-43 160
Msa1370970 AT5G44620.1 28.543 501 304 15 4 465 19 504 1.68e-42 158
Msa1370970 AT4G12330.1 26.726 449 278 9 56 465 67 503 2.52e-42 157
Msa1370970 AT2G45560.2 35.000 260 158 6 34 287 38 292 4.73e-42 152
Msa1370970 AT4G12310.1 28.009 457 278 8 56 471 65 511 8.79e-42 156
Msa1370970 AT4G12300.1 26.305 479 299 10 34 471 42 507 1.85e-41 155
Msa1370970 AT5G07990.1 29.345 351 233 7 9 355 8 347 2.25e-41 155
Msa1370970 AT1G33720.4 29.504 383 221 10 131 473 1 374 1.23e-39 147
Msa1370970 AT1G33720.3 29.504 383 221 10 131 473 1 374 1.23e-39 147
Msa1370970 AT1G33720.5 29.504 383 221 10 131 473 1 374 1.23e-39 147
Msa1370970 AT5G25120.1 29.379 354 228 11 9 356 6 343 1.15e-38 147
Msa1370970 AT4G22690.1 26.850 473 290 12 45 476 95 552 1.92e-38 147
Msa1370970 AT5G06900.1 26.870 361 243 10 1 355 4 349 5.48e-38 145
Msa1370970 AT2G40890.1 29.213 356 220 11 19 360 11 348 5.72e-38 145
Msa1370970 AT4G22710.1 26.638 473 291 11 45 476 64 521 7.58e-38 145
Msa1370970 AT5G57260.1 28.972 321 211 9 35 349 31 340 1.35e-37 144
Msa1370970 AT4G37340.1 27.108 498 301 18 27 484 23 498 3.87e-37 143
Msa1370970 AT2G45560.3 37.500 208 123 5 34 239 38 240 5.38e-37 136
Msa1370970 AT2G30770.1 25.527 474 296 13 33 465 32 489 8.95e-37 142
Msa1370970 AT4G37320.1 26.964 471 293 15 33 468 30 484 1.24e-36 141
Msa1370970 AT3G26300.1 27.171 357 240 9 7 356 4 347 2.45e-36 140
Msa1370970 AT5G25140.1 28.286 350 232 10 13 356 7 343 5.31e-36 140
Msa1370970 AT1G33720.2 27.206 408 231 10 131 477 1 403 9.75e-36 137
Msa1370970 AT2G23190.1 30.812 357 222 12 9 357 52 391 1.93e-35 139
Msa1370970 AT1G33730.1 27.321 377 215 9 135 465 1 364 3.09e-35 135
Msa1370970 AT1G33730.2 27.321 377 215 9 135 465 1 364 3.09e-35 135
Msa1370970 AT4G37360.1 27.000 500 305 17 9 468 5 484 4.47e-35 137
Msa1370970 AT4G37310.1 25.100 502 321 15 9 467 6 495 4.79e-35 137
Msa1370970 AT1G74550.1 30.508 354 214 11 9 355 3 331 2.06e-34 135
Msa1370970 AT5G57220.1 26.695 472 293 16 31 468 27 479 7.71e-34 134
Msa1370970 AT3G48270.1 26.911 327 213 8 36 357 33 338 2.73e-33 132
Msa1370970 AT4G13310.2 26.852 324 227 6 34 356 32 346 3.38e-33 130
Msa1370970 AT1G11610.1 26.364 330 223 8 33 357 32 346 3.82e-33 132
Msa1370970 AT4G31500.1 24.051 474 301 12 33 461 28 487 3.83e-33 132
Msa1370970 AT3G26280.1 26.761 497 292 17 26 470 23 499 4.21e-33 132
Msa1370970 AT4G37430.1 25.631 515 315 18 1 471 1 491 5.08e-33 131
Msa1370970 AT1G11610.2 26.364 330 223 8 33 357 32 346 5.58e-33 131
Msa1370970 AT3G26280.2 26.761 497 292 17 26 470 40 516 5.88e-33 131
Msa1370970 AT4G37370.1 27.255 499 302 18 9 468 6 482 8.97e-33 130
Msa1370970 AT5G25180.1 29.091 330 214 10 33 356 28 343 1.02e-32 130
Msa1370970 AT2G24180.1 29.882 338 210 9 33 359 35 356 1.05e-32 130
Msa1370970 AT4G13310.1 26.852 324 227 6 34 356 32 346 2.01e-32 129
Msa1370970 AT5G24960.2 28.662 314 206 9 34 343 33 332 2.22e-32 128
Msa1370970 AT3G26310.1 27.273 352 242 10 9 357 7 347 2.97e-32 129
Msa1370970 AT3G26290.1 23.313 489 316 12 24 472 28 497 4.91e-32 129
Msa1370970 AT3G26320.1 26.879 346 233 9 19 357 16 348 5.73e-32 128
Msa1370970 AT5G24950.1 27.300 337 232 8 6 341 5 329 6.85e-32 128
Msa1370970 AT2G02580.1 25.049 507 325 16 9 474 7 499 1.01e-31 127
Msa1370970 AT4G13770.1 23.875 511 320 14 5 468 7 495 1.12e-31 127
Msa1370970 AT5G24960.1 28.662 314 206 9 34 343 33 332 1.37e-31 127
Msa1370970 AT4G37410.1 25.197 508 312 20 3 468 4 485 1.55e-31 127
Msa1370970 AT5G25130.1 28.814 354 230 11 9 356 6 343 2.31e-31 126
Msa1370970 AT3G28740.1 29.573 328 214 8 33 355 38 353 3.69e-31 126
Msa1370970 AT5G67310.1 26.261 476 296 14 27 465 35 492 3.80e-31 126
Msa1370970 AT3G26330.1 25.104 482 302 16 35 470 32 500 3.86e-31 126
Msa1370970 AT5G36220.1 25.731 513 313 20 1 468 1 490 4.18e-31 126
Msa1370970 AT5G42590.1 27.523 327 224 7 33 357 31 346 4.72e-31 125
Msa1370970 AT3G26230.1 27.255 510 306 18 11 470 1 495 5.73e-31 125
Msa1370970 AT5G04630.1 24.935 385 272 7 3 382 11 383 7.51e-31 125
Msa1370970 AT3G48300.1 27.003 337 221 10 24 356 20 335 7.84e-31 125
Msa1370970 AT3G48300.2 27.003 337 221 10 24 356 22 337 8.02e-31 125
Msa1370970 AT4G37330.1 26.200 500 304 16 9 468 7 481 1.10e-30 124
Msa1370970 AT1G74540.1 29.217 332 204 8 34 355 27 337 1.27e-30 124
Msa1370970 AT4G31970.1 25.670 522 315 16 9 471 8 515 2.39e-30 124
Msa1370970 AT3G26290.2 25.959 339 226 9 24 356 41 360 4.71e-30 123
Msa1370970 AT1G13110.1 27.247 356 237 11 11 355 8 352 6.79e-30 122
Msa1370970 AT5G04330.1 25.447 503 313 13 26 480 24 512 9.18e-30 122
Msa1370970 AT5G10600.1 23.517 489 296 15 33 471 45 505 1.07e-29 122
Msa1370970 AT3G26270.1 26.263 495 283 19 34 472 32 500 1.27e-29 121
Msa1370970 AT2G30750.1 26.586 331 221 10 33 357 32 346 1.62e-29 121
Msa1370970 AT3G48280.1 21.893 507 333 13 9 472 2 488 2.10e-29 120
Msa1370970 AT4G31940.1 24.808 520 329 14 6 471 5 516 2.97e-29 120
Msa1370970 AT2G45580.2 26.685 371 211 10 157 480 4 360 4.21e-29 118
Msa1370970 AT2G23220.1 28.614 332 216 10 33 357 45 362 4.88e-29 120
Msa1370970 AT3G26200.1 28.614 332 219 10 33 356 27 348 6.71e-29 119
Msa1370970 AT3G48310.1 22.833 473 306 12 35 468 33 485 1.13e-28 119
Msa1370970 AT3G10560.1 25.798 376 266 8 10 382 22 387 1.27e-28 119
Msa1370970 AT3G48320.1 24.234 359 235 9 9 357 8 339 1.96e-28 118
Msa1370970 AT5G06905.1 27.273 330 221 9 34 356 31 348 4.90e-28 117
Msa1370970 AT3G26190.1 27.273 330 226 9 33 356 27 348 5.02e-28 117
Msa1370970 AT4G36220.1 24.324 481 289 16 41 465 47 508 6.09e-28 117
Msa1370970 AT1G66540.1 27.154 383 227 11 120 465 1 368 7.85e-28 115
Msa1370970 AT3G53280.1 26.727 333 222 11 33 356 27 346 1.06e-27 116
Msa1370970 AT1G13090.2 25.731 342 213 10 33 355 27 346 1.19e-27 115
Msa1370970 AT1G01280.1 24.011 354 249 8 9 355 12 352 1.27e-27 116
Msa1370970 AT3G44250.1 28.107 338 212 12 33 356 27 347 1.34e-27 115
Msa1370970 AT3G26170.1 24.722 360 245 11 11 357 6 352 2.66e-27 115
Msa1370970 AT3G48290.1 22.436 468 308 10 35 465 34 483 3.60e-27 114
Msa1370970 AT1G13080.1 27.410 332 219 12 34 355 31 350 5.44e-27 114
Msa1370970 AT3G26180.1 24.857 350 239 10 20 357 15 352 6.63e-27 114
Msa1370970 AT4G13290.1 24.691 324 226 6 34 356 33 339 7.70e-27 113
Msa1370970 AT5G10610.1 22.338 479 320 12 30 472 28 490 8.11e-27 113
Msa1370970 AT3G26210.1 27.974 311 202 9 55 355 51 349 1.24e-26 113
Msa1370970 AT2G42250.1 22.863 503 333 12 6 465 13 503 4.45e-26 111
Msa1370970 AT4G15360.1 26.807 332 218 8 34 355 40 356 1.29e-25 110
Msa1370970 AT3G20940.1 26.506 332 228 8 29 355 37 357 1.70e-25 109
Msa1370970 AT5G42580.1 27.815 302 197 9 55 355 60 341 2.52e-25 109
Msa1370970 AT4G37400.1 28.387 310 200 8 52 355 47 340 4.52e-25 108
Msa1370970 AT3G26160.1 27.059 340 222 9 33 360 29 354 6.36e-25 108
Msa1370970 AT3G25180.1 23.772 509 322 17 11 471 15 505 8.30e-25 107
Msa1370970 AT4G31950.1 26.975 367 236 9 9 359 8 358 1.26e-24 107
Msa1370970 AT3G20140.1 24.274 482 305 18 31 470 39 502 6.40e-24 105
Msa1370970 AT2G25160.2 25.000 364 253 11 9 359 8 364 1.34e-23 103
Msa1370970 AT3G20950.1 27.381 336 223 10 29 355 37 360 1.61e-23 103
Msa1370970 AT2G25160.1 25.000 364 253 11 9 359 8 364 1.71e-23 103
Msa1370970 AT3G26220.1 26.519 362 242 11 11 357 1 353 1.72e-23 103
Msa1370970 AT1G50520.1 27.414 321 221 9 43 360 52 363 1.96e-23 103
Msa1370970 AT3G25180.2 24.581 358 247 10 11 357 15 360 2.31e-23 102
Msa1370970 AT3G48290.2 21.704 493 307 11 35 465 34 509 1.37e-22 101
Msa1370970 AT3G53300.1 24.280 486 300 17 33 468 27 494 1.87e-22 100
Msa1370970 AT1G13710.1 26.016 369 237 11 1 355 18 364 3.11e-22 100
Msa1370970 AT3G32047.1 26.140 329 226 10 55 378 63 379 5.69e-22 99.4
Msa1370970 AT2G27000.1 25.376 465 294 17 56 479 61 513 5.82e-22 99.4
Msa1370970 AT4G20240.2 26.154 325 228 7 33 356 32 345 6.23e-22 98.2
Msa1370970 AT4G20240.1 26.154 325 228 7 33 356 32 345 6.67e-22 98.6
Msa1370970 AT2G14100.1 26.899 316 214 12 45 355 54 357 7.86e-22 99.0
Msa1370970 AT3G26830.1 22.778 360 253 10 7 355 1 346 8.92e-22 98.6
Msa1370970 AT3G26150.1 24.793 363 248 10 10 360 5 354 1.47e-20 94.7
Msa1370970 AT3G20090.2 25.949 316 218 8 45 355 54 358 2.12e-20 94.4
Msa1370970 AT3G20110.1 26.126 333 225 11 30 355 35 353 2.42e-20 94.4
Msa1370970 AT1G16400.1 23.837 344 232 9 33 357 43 375 4.21e-20 93.6
Msa1370970 AT5G09970.1 26.648 364 242 11 3 355 35 384 5.86e-20 93.2
Msa1370970 AT1G50560.1 27.184 309 207 9 54 355 63 360 7.57e-20 92.8
Msa1370970 AT5G04660.1 21.637 342 255 6 46 382 53 386 1.13e-19 92.4
Msa1370970 AT5G47990.1 23.305 472 299 14 45 471 53 506 1.14e-19 92.0
Msa1370970 AT1G16410.2 23.684 342 231 9 33 355 44 374 1.24e-19 91.7
Msa1370970 AT1G16410.1 23.684 342 231 9 33 355 44 374 1.46e-19 92.0
Msa1370970 AT1G28430.1 25.843 356 239 10 9 355 15 354 3.66e-19 90.9
Msa1370970 AT5G25900.1 24.375 320 225 5 41 353 50 359 4.64e-19 90.5
Msa1370970 AT1G66540.2 27.445 317 179 10 185 465 8 309 6.05e-19 88.2
Msa1370970 AT1G13100.1 25.153 326 211 12 45 355 39 346 7.54e-19 89.7
Msa1370970 AT4G15350.1 26.129 310 203 8 56 355 57 350 1.68e-18 88.6
Msa1370970 AT1G74110.1 26.706 337 214 11 36 355 65 385 2.36e-18 88.2
Msa1370970 AT3G20130.1 25.749 334 207 14 39 355 47 356 6.31e-18 87.0
Msa1370970 AT2G46660.1 24.159 327 222 10 36 357 72 377 1.78e-17 85.5
Msa1370970 AT3G20960.2 23.414 457 284 18 62 471 69 506 1.95e-17 85.5
Msa1370970 AT3G20100.1 24.013 304 217 9 56 355 63 356 3.53e-17 84.7
Msa1370970 AT3G20120.4 23.140 484 300 16 45 479 52 512 6.45e-17 83.6
Msa1370970 AT3G61035.1 27.948 229 138 6 41 264 49 255 2.15e-16 80.5
Msa1370970 AT3G10570.1 23.529 323 225 9 46 359 55 364 2.32e-16 82.0
Msa1370970 AT2G05180.1 24.848 330 216 11 39 355 46 356 7.15e-16 80.1
Msa1370970 AT5G05260.2 22.874 341 235 10 34 355 40 371 8.00e-16 80.5
Msa1370970 AT4G39950.1 23.416 363 245 11 11 355 34 381 8.91e-16 80.5
Msa1370970 AT4G39950.2 23.416 363 245 11 11 355 74 421 1.40e-15 79.7
Msa1370970 AT1G11600.1 21.598 338 235 7 33 355 34 356 1.55e-15 79.3
Msa1370970 AT3G61880.1 23.304 339 238 9 25 359 59 379 4.11e-15 78.2
Msa1370970 AT3G61880.2 23.304 339 238 9 25 359 59 379 5.41e-15 77.8
Msa1370970 AT5G35715.1 22.545 448 282 19 70 468 1 432 9.99e-15 76.6
Msa1370970 AT1G13090.1 24.436 266 163 8 33 282 27 270 1.93e-14 74.3
Msa1370970 AT1G01190.1 25.526 333 215 12 33 357 72 379 1.36e-13 73.6
Msa1370970 AT1G01190.2 25.526 333 215 12 33 357 77 384 1.51e-13 73.2
Msa1370970 AT1G79370.1 20.159 377 259 12 33 377 39 405 2.67e-13 72.4
Msa1370970 AT5G35917.1 22.492 329 223 11 34 340 42 360 6.61e-13 71.2
Msa1370970 AT3G20960.1 23.267 404 245 17 115 471 18 403 1.08e-11 67.0

Find 141 sgRNAs with CRISPR-Local

Find 388 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGGCTGCATAAACCTTTC+TGG 0.152031 tig0019144:+82361 None:intergenic
TGCACTTTCGTTAGGGTTCT+TGG 0.172377 tig0019144:+82635 None:intergenic
ACTAAAATTTGTGTCTCTTT+TGG 0.177799 tig0019144:+82442 None:intergenic
CCTGTTGCTGCTGCTGTTGC+AGG 0.190147 tig0019144:-82094 Msa1370970:CDS
GGGTTTGGTATTGGCTATTT+TGG 0.227158 tig0019144:-83972 Msa1370970:CDS
CCCTCCTCAACTCCTTTGAT+TGG 0.249670 tig0019144:-82228 Msa1370970:CDS
ATTCTATTATCATGCGATTA+AGG 0.261702 tig0019144:-83366 Msa1370970:CDS
AACGGAGCATCCCACACTTT+TGG 0.279393 tig0019144:+82394 None:intergenic
CGGGGTTGTGGGTTTGGTAT+TGG 0.297345 tig0019144:-83981 Msa1370970:CDS
TGGAAACACTAAAGACTTCT+TGG 0.317175 tig0019144:-83180 Msa1370970:CDS
ATATTACGGGGTTGTGGGTT+TGG 0.317375 tig0019144:-83987 Msa1370970:CDS
TTAGTGAATGTTTGGGCAAT+TGG 0.318471 tig0019144:-82424 Msa1370970:CDS
CTAGCCCCTCTCTCCATTCC+AGG 0.327907 tig0019144:+83389 None:intergenic
GTTCCATTTGCACTTTCGTT+AGG 0.328822 tig0019144:+82627 None:intergenic
ATGGAACTAAGGAGCAAAAT+AGG 0.330969 tig0019144:-82611 Msa1370970:CDS
AATAGGCTCTGATAGGAAAA+TGG 0.341408 tig0019144:-82594 Msa1370970:CDS
CCTTTGTAATCTACCATGTT+TGG 0.342905 tig0019144:+82343 None:intergenic
ATGGTTATGATTCCCTTTCA+TGG 0.345142 tig0019144:+83673 None:intergenic
GGCTTGACCCTCAAGGTATA+AGG 0.382148 tig0019144:-83289 Msa1370970:CDS
GGGATGCTCCGTTATTGTTC+TGG 0.386693 tig0019144:-82384 Msa1370970:CDS
TGTTTCTCCTTATACCTTGA+GGG 0.388572 tig0019144:+83282 None:intergenic
TAGTGAATGTTTGGGCAATT+GGG 0.397363 tig0019144:-82423 Msa1370970:CDS
GCACTTTCGTTAGGGTTCTT+GGG 0.397869 tig0019144:+82636 None:intergenic
AGGGTCAAGCCACTTCAATA+TGG 0.399296 tig0019144:+83301 None:intergenic
ATGGACATGACAGAGGGAAT+GGG 0.404794 tig0019144:-82175 Msa1370970:CDS
GCCATGGACTCTTGCATGAT+TGG 0.411426 tig0019144:-82478 Msa1370970:CDS
AAGTAAATATGGAATATTAC+GGG 0.412611 tig0019144:-84000 None:intergenic
GAAAATGATATTGTTGGAAA+TGG 0.415018 tig0019144:-83200 Msa1370970:CDS
TCTCCTTGATCACTGCTTTG+AGG 0.417774 tig0019144:+82545 None:intergenic
ATGGAATATTACGGGGTTGT+GGG 0.424105 tig0019144:-83992 Msa1370970:CDS
TGATAGGAAAATGGAAGAAA+AGG 0.427223 tig0019144:-82585 Msa1370970:CDS
CCATCCACTGGCCAACATCT+TGG 0.428717 tig0019144:+83881 None:intergenic
TATGGAATATTACGGGGTTG+TGG 0.433213 tig0019144:-83993 Msa1370970:CDS
TTGATCACTGCTTTGAGGTA+TGG 0.435413 tig0019144:+82550 None:intergenic
ATGCGCACTGGCGCATGCTT+AGG 0.438858 tig0019144:-83616 Msa1370970:CDS
ATTAAGGTTATGAAATATGC+TGG 0.440383 tig0019144:-83350 Msa1370970:CDS
CTGTTGCTGCTGCTGTTGCA+GGG 0.442372 tig0019144:-82093 Msa1370970:CDS
AACAACGACGCAGCTCTTGC+AGG 0.443110 tig0019144:-83713 Msa1370970:CDS
GATGTGCTCTTGCAGTTTCG+TGG 0.444797 tig0019144:-83158 Msa1370970:CDS
TTTGGTTCCTCACATGGCCA+TGG 0.444863 tig0019144:-82494 Msa1370970:CDS
TTCCATTTGCACTTTCGTTA+GGG 0.447682 tig0019144:+82628 None:intergenic
CTCTTGCAGTTTCGTGGGGA+TGG 0.457469 tig0019144:-83152 Msa1370970:CDS
GGGAAGAAATCCGCAACGTT+GGG 0.459704 tig0019144:+83323 None:intergenic
CCTGCAACAGCAGCAGCAAC+AGG 0.461754 tig0019144:+82094 None:intergenic
GATGGACATGACAGAGGGAA+TGG 0.463685 tig0019144:-82176 Msa1370970:CDS
AACCCTAACGAAAGTGCAAA+TGG 0.463750 tig0019144:-82630 Msa1370970:CDS
TCTGTCATGTCCATCTCCTC+TGG 0.464224 tig0019144:+82184 None:intergenic
GAAGTAAATATGGAATATTA+CGG 0.464907 tig0019144:-84001 None:intergenic
TGGAAAATGTTGCCATCCAC+TGG 0.467387 tig0019144:+83869 None:intergenic
ATGGTCCTATCATGACCCTT+TGG 0.468525 tig0019144:-83796 Msa1370970:CDS
CGACGACAAGCACACTAGAA+TGG 0.471519 tig0019144:-82682 Msa1370970:CDS
GCAACAGGACTTCCTTTGTA+AGG 0.471983 tig0019144:+82109 None:intergenic
GACGACAAGCACACTAGAAT+GGG 0.477421 tig0019144:-82681 Msa1370970:CDS
CCTAGCCAAAGGGTCATGAT+AGG 0.479142 tig0019144:+83791 None:intergenic
GGAGCAAAATAGGCTCTGAT+AGG 0.479760 tig0019144:-82601 Msa1370970:CDS
GGGTCAAGCCACTTCAATAT+GGG 0.481459 tig0019144:+83302 None:intergenic
CGTTATTGTTCTGGCCAGAA+AGG 0.485379 tig0019144:-82375 Msa1370970:CDS
CGAAAGTGCAAATGGAACTA+AGG 0.492908 tig0019144:-82622 Msa1370970:CDS
TTCGTGGGGATGGTGTCAGC+GGG 0.493274 tig0019144:-83142 Msa1370970:CDS
GTGTTTCTCCTTATACCTTG+AGG 0.500391 tig0019144:+83281 None:intergenic
CGCAGCTCTTGCAGGAAGGA+AGG 0.503614 tig0019144:-83705 Msa1370970:CDS
AGGATGGAAAATGATATTGT+TGG 0.504141 tig0019144:-83206 Msa1370970:CDS
ATGTGCTCTTGCAGTTTCGT+GGG 0.511305 tig0019144:-83157 Msa1370970:CDS
AGTTCTTGAAGTAAAACTGT+AGG 0.516649 tig0019144:+83118 None:intergenic
TGGTCTTAAGCCAGAGGAGA+TGG 0.517441 tig0019144:-82194 Msa1370970:CDS
TTTACGAGACAGTATTGTAA+AGG 0.524278 tig0019144:+83820 None:intergenic
ATACCTCAAAGCAGTGATCA+AGG 0.526699 tig0019144:-82548 Msa1370970:CDS
CTTTCTGGCCAGAACAATAA+CGG 0.528336 tig0019144:+82376 None:intergenic
CCTATCATGACCCTTTGGCT+AGG 0.531896 tig0019144:-83791 Msa1370970:CDS
CTTGGTCATCAGCTTCCACC+TGG 0.532459 tig0019144:-83905 Msa1370970:CDS
ATGGTTCATCAAACAAAGGA+TGG 0.533106 tig0019144:-83222 Msa1370970:CDS
GGTACATGTATGACTTTCAA+AGG 0.533474 tig0019144:+82130 None:intergenic
TCCAATCATGCAAGAGTCCA+TGG 0.539266 tig0019144:+82477 None:intergenic
GGTATGGATGTGGCTGGCAA+TGG 0.542111 tig0019144:-83951 Msa1370970:CDS
ACTGGCCAACATCTTGGTCC+AGG 0.542875 tig0019144:+83887 None:intergenic
TGAATGTTTGGGCAATTGGG+AGG 0.547014 tig0019144:-82420 Msa1370970:CDS
AAGGTTTATGAAGCCATGAA+AGG 0.547188 tig0019144:-83686 Msa1370970:CDS
GAATGTTTGGGCAATTGGGA+GGG 0.547304 tig0019144:-82419 Msa1370970:CDS
TCAAAGGATTTGTTAGACCC+TGG 0.549556 tig0019144:-83407 Msa1370970:CDS
TGTTGCTGCTGCTGTTGCAG+GGG 0.549880 tig0019144:-82092 Msa1370970:CDS
AGGTTTATGAAGCCATGAAA+GGG 0.553600 tig0019144:-83685 Msa1370970:CDS
GTTCTTGAAGTAAAACTGTA+GGG 0.553986 tig0019144:+83119 None:intergenic
ATCAGACAAAATCCAATCAA+AGG 0.557064 tig0019144:+82216 None:intergenic
TTTCGTGGGGATGGTGTCAG+CGG 0.557325 tig0019144:-83143 Msa1370970:CDS
AGTAATTGTGCCGTTGATGT+TGG 0.558103 tig0019144:-83479 Msa1370970:CDS
AGAGACAACCACGGTGCACA+TGG 0.564359 tig0019144:+83766 None:intergenic
GGATTTGTTAGACCCTGGAA+TGG 0.564388 tig0019144:-83402 Msa1370970:CDS
GTCTGATGGTCTTAAGCCAG+AGG 0.564564 tig0019144:-82200 Msa1370970:CDS
AAATCCAATCAAAGGAGTTG+AGG 0.566927 tig0019144:+82224 None:intergenic
TTCCACCTGGACCAAGATGT+TGG 0.567488 tig0019144:-83892 Msa1370970:CDS
GATGTGGCTGGCAATGGTGA+TGG 0.568461 tig0019144:-83945 Msa1370970:CDS
CTTGATAGATGAAGCTGCTG+TGG 0.568499 tig0019144:-83507 Msa1370970:CDS
ATTTCTTCCCCATATTGAAG+TGG 0.572280 tig0019144:-83310 Msa1370970:CDS
TTGTAGGAAATGTTCACTGC+AGG 0.572818 tig0019144:-82713 Msa1370970:intron
GTGGTGGTGACAAACCTAGC+TGG 0.573955 tig0019144:+83849 None:intergenic
TGCAAAATGCATAGACCGCA+TGG 0.574901 tig0019144:-83534 Msa1370970:CDS
GCACATGGAACCTAGCCAAA+GGG 0.575087 tig0019144:+83781 None:intergenic
TAGCCCCTCTCTCCATTCCA+GGG 0.575198 tig0019144:+83390 None:intergenic
TCCAATCAAAGGAGTTGAGG+AGG 0.575355 tig0019144:+82227 None:intergenic
TCTCAAAAGCTCTTTCAACA+TGG 0.581975 tig0019144:+83252 None:intergenic
GGGGAAGAAATCCGCAACGT+TGG 0.582375 tig0019144:+83322 None:intergenic
TGGACATGACAGAGGGAATG+GGG 0.587582 tig0019144:-82174 Msa1370970:CDS
AATCATAACCATGGTAGTGA+AGG 0.592371 tig0019144:-83662 Msa1370970:CDS
AAAGAATTTGCCAACATCAA+CGG 0.594493 tig0019144:+83469 None:intergenic
TTAAGGTTATGAAATATGCT+GGG 0.594523 tig0019144:-83349 Msa1370970:CDS
AAGGTTTATGCAGCCAAACA+TGG 0.595707 tig0019144:-82356 Msa1370970:intron
ACAATACTGTCTCGTAAACA+TGG 0.595885 tig0019144:-83815 Msa1370970:CDS
CTTCTCAATATGATGCGCAC+TGG 0.596795 tig0019144:-83628 Msa1370970:CDS
CACACTAGAATGGGTGATGG+CGG 0.602795 tig0019144:-82672 Msa1370970:CDS
GAGGAGATGGACATGACAGA+GGG 0.605353 tig0019144:-82181 Msa1370970:CDS
GAACATAGAAGAGTGAAACT+TGG 0.610645 tig0019144:-83923 Msa1370970:CDS
TAGACCCTGGAATGGAGAGA+GGG 0.612574 tig0019144:-83394 Msa1370970:CDS
TTGAAGTGGCTTGACCCTCA+AGG 0.612975 tig0019144:-83296 Msa1370970:CDS
GTCATACATGTACCTTACAA+AGG 0.615728 tig0019144:-82121 Msa1370970:CDS
TTAGACCCTGGAATGGAGAG+AGG 0.615932 tig0019144:-83395 Msa1370970:CDS
TTGGGAGGGATCCAAAAGTG+TGG 0.616012 tig0019144:-82405 Msa1370970:CDS
CCAAGATGTTGGCCAGTGGA+TGG 0.616688 tig0019144:-83881 Msa1370970:CDS
TGGGAGGGATCCAAAAGTGT+GGG 0.620540 tig0019144:-82404 Msa1370970:CDS
GGCCAACATCTTGGTCCAGG+TGG 0.622198 tig0019144:+83890 None:intergenic
TGCACATGGAACCTAGCCAA+AGG 0.622670 tig0019144:+83780 None:intergenic
TGCTGGGAAACCCAACGTTG+CGG 0.626669 tig0019144:-83333 Msa1370970:CDS
ACGACGCAGCTCTTGCAGGA+AGG 0.630890 tig0019144:-83709 Msa1370970:CDS
CAAGAGTCCATGGCCATGTG+AGG 0.631059 tig0019144:+82487 None:intergenic
CCAATCAAAGGAGTTGAGGA+GGG 0.634163 tig0019144:+82228 None:intergenic
TGAGTGAACCTTCACTACCA+TGG 0.643061 tig0019144:+83654 None:intergenic
AGAGGAGATGGACATGACAG+AGG 0.643121 tig0019144:-82182 Msa1370970:CDS
CAGGATGGTTCATCAAACAA+AGG 0.644303 tig0019144:-83226 Msa1370970:CDS
TGTAGGAAATGTTCACTGCA+GGG 0.651817 tig0019144:-82712 Msa1370970:intron
TGTGCTCTTGCAGTTTCGTG+GGG 0.652371 tig0019144:-83156 Msa1370970:CDS
GGTCAAGCCACTTCAATATG+GGG 0.652615 tig0019144:+83303 None:intergenic
AAGCACACTAGAATGGGTGA+TGG 0.661584 tig0019144:-82675 Msa1370970:CDS
AGACCCTGGAATGGAGAGAG+GGG 0.679378 tig0019144:-83393 Msa1370970:CDS
AGTCGCTTAGACGCTATGCG+AGG 0.686040 tig0019144:-83563 Msa1370970:CDS
TGGACCAAGATGTTGGCCAG+TGG 0.688790 tig0019144:-83885 Msa1370970:CDS
ATGAAAGGGAATCATAACCA+TGG 0.699090 tig0019144:-83671 Msa1370970:CDS
AGTATTGTAAAGGACTCGTG+TGG 0.717650 tig0019144:+83830 None:intergenic
ATTGTAAAGGACTCGTGTGG+TGG 0.720066 tig0019144:+83833 None:intergenic
AGTAAATATGGAATATTACG+GGG 0.720200 tig0019144:-83999 None:intergenic
ACTAGTCACAAAGAACTCAG+TGG 0.760943 tig0019144:+83583 None:intergenic
CATCTATCAAGTGAACCATG+CGG 0.763708 tig0019144:+83519 None:intergenic
TTCACAAGAAGAGACAACCA+CGG 0.766592 tig0019144:+83757 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGATTAAAATATTGTAAAAA+TGG - tig0019144:83147-83166 Msa1370970:CDS 10.0%
!! AGATTAAAATATTGTAAAAA+TGG - tig0019144:83147-83166 Msa1370970:CDS 10.0%
!! TAAAATATTGTAAAAATGGA+AGG - tig0019144:83151-83170 Msa1370970:CDS 15.0%
!! TAAAATATTGTAAAAATGGA+AGG - tig0019144:83151-83170 Msa1370970:CDS 15.0%
!!! ACAAATCCTTTGAAAAAATA+AGG + tig0019144:82665-82684 None:intergenic 20.0%
!!! AATCCATTTTTAATTGCTTT+AGG - tig0019144:83181-83200 Msa1370970:CDS 20.0%
!! ATACCTAAAGCAATTAAAAA+TGG + tig0019144:83187-83206 None:intergenic 20.0%
!!! CATAAATTAACTTTTTGTGA+TGG + tig0019144:83265-83284 None:intergenic 20.0%
!! AGTTAATTTATGTCAAATCA+TGG - tig0019144:83273-83292 Msa1370970:CDS 20.0%
!! TAGTAATATTATTGTGTTGT+AGG - tig0019144:83350-83369 Msa1370970:CDS 20.0%
!!! ACAAATTTTAGTGAATGTTT+GGG - tig0019144:83648-83667 Msa1370970:CDS 20.0%
!!! ACAAATCCTTTGAAAAAATA+AGG + tig0019144:82665-82684 None:intergenic 20.0%
!!! AATCCATTTTTAATTGCTTT+AGG - tig0019144:83181-83200 Msa1370970:CDS 20.0%
!! ATACCTAAAGCAATTAAAAA+TGG + tig0019144:83187-83206 None:intergenic 20.0%
!!! CATAAATTAACTTTTTGTGA+TGG + tig0019144:83265-83284 None:intergenic 20.0%
!! AGTTAATTTATGTCAAATCA+TGG - tig0019144:83273-83292 Msa1370970:CDS 20.0%
!! TAGTAATATTATTGTGTTGT+AGG - tig0019144:83350-83369 Msa1370970:CDS 20.0%
!!! ACAAATTTTAGTGAATGTTT+GGG - tig0019144:83648-83667 Msa1370970:CDS 20.0%
! ATTCTATTATCATGCGATTA+AGG - tig0019144:82713-82732 Msa1370970:intron 25.0%
! ATTAAGGTTATGAAATATGC+TGG - tig0019144:82729-82748 Msa1370970:intron 25.0%
! TTAAGGTTATGAAATATGCT+GGG - tig0019144:82730-82749 Msa1370970:intron 25.0%
! GAAAATGATATTGTTGGAAA+TGG - tig0019144:82879-82898 Msa1370970:intron 25.0%
! CTTCACATTTACTTCATATT+TGG - tig0019144:83014-83033 Msa1370970:intron 25.0%
!!! AGATTCGAATTTTAAGTACT+TGG - tig0019144:83108-83127 Msa1370970:CDS 25.0%
!! TAATTGCTTTAGGTATTAGT+TGG - tig0019144:83191-83210 Msa1370970:CDS 25.0%
!! ACTAAAATTTGTGTCTCTTT+TGG + tig0019144:83640-83659 None:intergenic 25.0%
!!! CACAAATTTTAGTGAATGTT+TGG - tig0019144:83647-83666 Msa1370970:CDS 25.0%
!! CAAAAGGTATATACTCAAAA+TGG + tig0019144:83765-83784 None:intergenic 25.0%
!!! CATTTTGAGTATATACCTTT+TGG - tig0019144:83763-83782 Msa1370970:CDS 25.0%
! ATTCTATTATCATGCGATTA+AGG - tig0019144:82713-82732 Msa1370970:intron 25.0%
! ATTAAGGTTATGAAATATGC+TGG - tig0019144:82729-82748 Msa1370970:intron 25.0%
! TTAAGGTTATGAAATATGCT+GGG - tig0019144:82730-82749 Msa1370970:intron 25.0%
! GAAAATGATATTGTTGGAAA+TGG - tig0019144:82879-82898 Msa1370970:intron 25.0%
! CTTCACATTTACTTCATATT+TGG - tig0019144:83014-83033 Msa1370970:intron 25.0%
!!! AGATTCGAATTTTAAGTACT+TGG - tig0019144:83108-83127 Msa1370970:CDS 25.0%
!! TAATTGCTTTAGGTATTAGT+TGG - tig0019144:83191-83210 Msa1370970:CDS 25.0%
!! ACTAAAATTTGTGTCTCTTT+TGG + tig0019144:83640-83659 None:intergenic 25.0%
!!! CACAAATTTTAGTGAATGTT+TGG - tig0019144:83647-83666 Msa1370970:CDS 25.0%
!! CAAAAGGTATATACTCAAAA+TGG + tig0019144:83765-83784 None:intergenic 25.0%
!!! CATTTTGAGTATATACCTTT+TGG - tig0019144:83763-83782 Msa1370970:CDS 25.0%
TTTACGAGACAGTATTGTAA+AGG + tig0019144:82262-82281 None:intergenic 30.0%
AAAGAATTTGCCAACATCAA+CGG + tig0019144:82613-82632 None:intergenic 30.0%
! TGGCAAATTCTTTTTCTTGA+TGG - tig0019144:82620-82639 Msa1370970:CDS 30.0%
AAAAAATAAGGTTCCCAATG+AGG + tig0019144:82653-82672 None:intergenic 30.0%
!!! TGGGAACCTTATTTTTTCAA+AGG - tig0019144:82656-82675 Msa1370970:CDS 30.0%
AGGATGGAAAATGATATTGT+TGG - tig0019144:82873-82892 Msa1370970:intron 30.0%
GTTCTTGAAGTAAAACTGTA+GGG + tig0019144:82963-82982 None:intergenic 30.0%
AGTTCTTGAAGTAAAACTGT+AGG + tig0019144:82964-82983 None:intergenic 30.0%
TTTAGGTATTAGTTGGAACT+GGG - tig0019144:83198-83217 Msa1370970:CDS 30.0%
ATTGATAGAGAGAAGAAACA+TGG - tig0019144:83311-83330 Msa1370970:CDS 30.0%
TGATAGGAAAATGGAAGAAA+AGG - tig0019144:83494-83513 Msa1370970:CDS 30.0%
!! TGAGTATATACCTTTTGGTT+CGG - tig0019144:83768-83787 Msa1370970:CDS 30.0%
ATCAGACAAAATCCAATCAA+AGG + tig0019144:83866-83885 None:intergenic 30.0%
! TTTGATTGGATTTTGTCTGA+TGG - tig0019144:83865-83884 Msa1370970:CDS 30.0%
TTTACGAGACAGTATTGTAA+AGG + tig0019144:82262-82281 None:intergenic 30.0%
AAAGAATTTGCCAACATCAA+CGG + tig0019144:82613-82632 None:intergenic 30.0%
! TGGCAAATTCTTTTTCTTGA+TGG - tig0019144:82620-82639 Msa1370970:CDS 30.0%
AAAAAATAAGGTTCCCAATG+AGG + tig0019144:82653-82672 None:intergenic 30.0%
!!! TGGGAACCTTATTTTTTCAA+AGG - tig0019144:82656-82675 Msa1370970:CDS 30.0%
AGGATGGAAAATGATATTGT+TGG - tig0019144:82873-82892 Msa1370970:intron 30.0%
GTTCTTGAAGTAAAACTGTA+GGG + tig0019144:82963-82982 None:intergenic 30.0%
AGTTCTTGAAGTAAAACTGT+AGG + tig0019144:82964-82983 None:intergenic 30.0%
TTTAGGTATTAGTTGGAACT+GGG - tig0019144:83198-83217 Msa1370970:CDS 30.0%
ATTGATAGAGAGAAGAAACA+TGG - tig0019144:83311-83330 Msa1370970:CDS 30.0%
TGATAGGAAAATGGAAGAAA+AGG - tig0019144:83494-83513 Msa1370970:CDS 30.0%
!! TGAGTATATACCTTTTGGTT+CGG - tig0019144:83768-83787 Msa1370970:CDS 30.0%
ATCAGACAAAATCCAATCAA+AGG + tig0019144:83866-83885 None:intergenic 30.0%
! TTTGATTGGATTTTGTCTGA+TGG - tig0019144:83865-83884 Msa1370970:CDS 30.0%
!!! TGGTATTGGCTATTTTGGTA+TGG - tig0019144:82112-82131 Msa1370970:CDS 35.0%
GAACATAGAAGAGTGAAACT+TGG - tig0019144:82156-82175 Msa1370970:CDS 35.0%
ACAATACTGTCTCGTAAACA+TGG - tig0019144:82264-82283 Msa1370970:intron 35.0%
!!! GTTGTTTTTGAACATGTCAC+GGG + tig0019144:82352-82371 None:intergenic 35.0%
!!! CGTTGTTTTTGAACATGTCA+CGG + tig0019144:82353-82372 None:intergenic 35.0%
AAGGTTTATGAAGCCATGAA+AGG - tig0019144:82393-82412 Msa1370970:CDS 35.0%
AGGTTTATGAAGCCATGAAA+GGG - tig0019144:82394-82413 Msa1370970:CDS 35.0%
ATGGTTATGATTCCCTTTCA+TGG + tig0019144:82409-82428 None:intergenic 35.0%
ATGAAAGGGAATCATAACCA+TGG - tig0019144:82408-82427 Msa1370970:CDS 35.0%
! AATCATAACCATGGTAGTGA+AGG - tig0019144:82417-82436 Msa1370970:CDS 35.0%
!! TTGATGGCTTTTAACCTCAT+TGG - tig0019144:82636-82655 Msa1370970:CDS 35.0%
! TGATGGCTTTTAACCTCATT+GGG - tig0019144:82637-82656 Msa1370970:CDS 35.0%
ATTTCTTCCCCATATTGAAG+TGG - tig0019144:82769-82788 Msa1370970:intron 35.0%
TGTTTCTCCTTATACCTTGA+GGG + tig0019144:82800-82819 None:intergenic 35.0%
TCTCAAAAGCTCTTTCAACA+TGG + tig0019144:82830-82849 None:intergenic 35.0%
ATGGTTCATCAAACAAAGGA+TGG - tig0019144:82857-82876 Msa1370970:intron 35.0%
TGGAAACACTAAAGACTTCT+TGG - tig0019144:82899-82918 Msa1370970:intron 35.0%
CTTTAGGTATTAGTTGGAAC+TGG - tig0019144:83197-83216 Msa1370970:CDS 35.0%
TTCCATTTGCACTTTCGTTA+GGG + tig0019144:83454-83473 None:intergenic 35.0%
ATGGAACTAAGGAGCAAAAT+AGG - tig0019144:83468-83487 Msa1370970:CDS 35.0%
! AATAGGCTCTGATAGGAAAA+TGG - tig0019144:83485-83504 Msa1370970:CDS 35.0%
TTAGTGAATGTTTGGGCAAT+TGG - tig0019144:83655-83674 Msa1370970:CDS 35.0%
TAGTGAATGTTTGGGCAATT+GGG - tig0019144:83656-83675 Msa1370970:CDS 35.0%
CCTTTGTAATCTACCATGTT+TGG + tig0019144:83739-83758 None:intergenic 35.0%
CCAAACATGGTAGATTACAA+AGG - tig0019144:83736-83755 Msa1370970:CDS 35.0%
!!! GAGTATATACCTTTTGGTTC+GGG - tig0019144:83769-83788 Msa1370970:CDS 35.0%
AAATCCAATCAAAGGAGTTG+AGG + tig0019144:83858-83877 None:intergenic 35.0%
GGTACATGTATGACTTTCAA+AGG + tig0019144:83952-83971 None:intergenic 35.0%
GTCATACATGTACCTTACAA+AGG - tig0019144:83958-83977 Msa1370970:CDS 35.0%
!!! TGGTATTGGCTATTTTGGTA+TGG - tig0019144:82112-82131 Msa1370970:CDS 35.0%
GAACATAGAAGAGTGAAACT+TGG - tig0019144:82156-82175 Msa1370970:CDS 35.0%
ACAATACTGTCTCGTAAACA+TGG - tig0019144:82264-82283 Msa1370970:intron 35.0%
!!! GTTGTTTTTGAACATGTCAC+GGG + tig0019144:82352-82371 None:intergenic 35.0%
!!! CGTTGTTTTTGAACATGTCA+CGG + tig0019144:82353-82372 None:intergenic 35.0%
AAGGTTTATGAAGCCATGAA+AGG - tig0019144:82393-82412 Msa1370970:CDS 35.0%
AGGTTTATGAAGCCATGAAA+GGG - tig0019144:82394-82413 Msa1370970:CDS 35.0%
ATGGTTATGATTCCCTTTCA+TGG + tig0019144:82409-82428 None:intergenic 35.0%
ATGAAAGGGAATCATAACCA+TGG - tig0019144:82408-82427 Msa1370970:CDS 35.0%
! AATCATAACCATGGTAGTGA+AGG - tig0019144:82417-82436 Msa1370970:CDS 35.0%
!! TTGATGGCTTTTAACCTCAT+TGG - tig0019144:82636-82655 Msa1370970:CDS 35.0%
! TGATGGCTTTTAACCTCATT+GGG - tig0019144:82637-82656 Msa1370970:CDS 35.0%
ATTTCTTCCCCATATTGAAG+TGG - tig0019144:82769-82788 Msa1370970:intron 35.0%
TGTTTCTCCTTATACCTTGA+GGG + tig0019144:82800-82819 None:intergenic 35.0%
TCTCAAAAGCTCTTTCAACA+TGG + tig0019144:82830-82849 None:intergenic 35.0%
ATGGTTCATCAAACAAAGGA+TGG - tig0019144:82857-82876 Msa1370970:intron 35.0%
TGGAAACACTAAAGACTTCT+TGG - tig0019144:82899-82918 Msa1370970:intron 35.0%
CTTTAGGTATTAGTTGGAAC+TGG - tig0019144:83197-83216 Msa1370970:CDS 35.0%
TTCCATTTGCACTTTCGTTA+GGG + tig0019144:83454-83473 None:intergenic 35.0%
ATGGAACTAAGGAGCAAAAT+AGG - tig0019144:83468-83487 Msa1370970:CDS 35.0%
! AATAGGCTCTGATAGGAAAA+TGG - tig0019144:83485-83504 Msa1370970:CDS 35.0%
TTAGTGAATGTTTGGGCAAT+TGG - tig0019144:83655-83674 Msa1370970:CDS 35.0%
TAGTGAATGTTTGGGCAATT+GGG - tig0019144:83656-83675 Msa1370970:CDS 35.0%
CCTTTGTAATCTACCATGTT+TGG + tig0019144:83739-83758 None:intergenic 35.0%
CCAAACATGGTAGATTACAA+AGG - tig0019144:83736-83755 Msa1370970:CDS 35.0%
!!! GAGTATATACCTTTTGGTTC+GGG - tig0019144:83769-83788 Msa1370970:CDS 35.0%
AAATCCAATCAAAGGAGTTG+AGG + tig0019144:83858-83877 None:intergenic 35.0%
GGTACATGTATGACTTTCAA+AGG + tig0019144:83952-83971 None:intergenic 35.0%
GTCATACATGTACCTTACAA+AGG - tig0019144:83958-83977 Msa1370970:CDS 35.0%
ATGGAATATTACGGGGTTGT+GGG - tig0019144:82087-82106 Msa1370970:CDS 40.0%
!!! GGGTTTGGTATTGGCTATTT+TGG - tig0019144:82107-82126 Msa1370970:CDS 40.0%
!!! TGGCTATTTTGGTATGGATG+TGG - tig0019144:82118-82137 Msa1370970:CDS 40.0%
!!! TATTTTGGTATGGATGTGGC+TGG - tig0019144:82122-82141 Msa1370970:CDS 40.0%
AGTATTGTAAAGGACTCGTG+TGG + tig0019144:82252-82271 None:intergenic 40.0%
TTCACAAGAAGAGACAACCA+CGG + tig0019144:82325-82344 None:intergenic 40.0%
ACTAGTCACAAAGAACTCAG+TGG + tig0019144:82499-82518 None:intergenic 40.0%
CATCTATCAAGTGAACCATG+CGG + tig0019144:82563-82582 None:intergenic 40.0%
! AGTAATTGTGCCGTTGATGT+TGG - tig0019144:82600-82619 Msa1370970:CDS 40.0%
!! TCAAAGGATTTGTTAGACCC+TGG - tig0019144:82672-82691 Msa1370970:CDS 40.0%
GTGTTTCTCCTTATACCTTG+AGG + tig0019144:82801-82820 None:intergenic 40.0%
!!! GAAAGAGCTTTTGAGATAGC+AGG - tig0019144:82834-82853 Msa1370970:intron 40.0%
CAGGATGGTTCATCAAACAA+AGG - tig0019144:82853-82872 Msa1370970:intron 40.0%
ACTGGGCATGCTAGAAATAT+AGG - tig0019144:83215-83234 Msa1370970:CDS 40.0%
CTGGGCATGCTAGAAATATA+GGG - tig0019144:83216-83235 Msa1370970:CDS 40.0%
TGGGCATGCTAGAAATATAG+GGG - tig0019144:83217-83236 Msa1370970:CDS 40.0%
TTGTAGGAAATGTTCACTGC+AGG - tig0019144:83366-83385 Msa1370970:CDS 40.0%
TGTAGGAAATGTTCACTGCA+GGG - tig0019144:83367-83386 Msa1370970:CDS 40.0%
! AACCCTAACGAAAGTGCAAA+TGG - tig0019144:83449-83468 Msa1370970:CDS 40.0%
GTTCCATTTGCACTTTCGTT+AGG + tig0019144:83455-83474 None:intergenic 40.0%
! CGAAAGTGCAAATGGAACTA+AGG - tig0019144:83457-83476 Msa1370970:CDS 40.0%
!! TTGATCACTGCTTTGAGGTA+TGG + tig0019144:83532-83551 None:intergenic 40.0%
ATACCTCAAAGCAGTGATCA+AGG - tig0019144:83531-83550 Msa1370970:CDS 40.0%
GAACCAAAAAAGGAAGAGGT+GGG + tig0019144:83573-83592 None:intergenic 40.0%
TGAGGAACCAAAAAAGGAAG+AGG + tig0019144:83577-83596 None:intergenic 40.0%
!!! TCCTTTTTTGGTTCCTCACA+TGG - tig0019144:83579-83598 Msa1370970:CDS 40.0%
! CTTTCTGGCCAGAACAATAA+CGG + tig0019144:83706-83725 None:intergenic 40.0%
TTTGGCTGCATAAACCTTTC+TGG + tig0019144:83721-83740 None:intergenic 40.0%
AAGGTTTATGCAGCCAAACA+TGG - tig0019144:83723-83742 Msa1370970:CDS 40.0%
!!! ATATACCTTTTGGTTCGGGT+CGG - tig0019144:83773-83792 Msa1370970:CDS 40.0%
ATGGAATATTACGGGGTTGT+GGG - tig0019144:82087-82106 Msa1370970:CDS 40.0%
!!! GGGTTTGGTATTGGCTATTT+TGG - tig0019144:82107-82126 Msa1370970:CDS 40.0%
!!! TGGCTATTTTGGTATGGATG+TGG - tig0019144:82118-82137 Msa1370970:CDS 40.0%
!!! TATTTTGGTATGGATGTGGC+TGG - tig0019144:82122-82141 Msa1370970:CDS 40.0%
AGTATTGTAAAGGACTCGTG+TGG + tig0019144:82252-82271 None:intergenic 40.0%
TTCACAAGAAGAGACAACCA+CGG + tig0019144:82325-82344 None:intergenic 40.0%
ACTAGTCACAAAGAACTCAG+TGG + tig0019144:82499-82518 None:intergenic 40.0%
CATCTATCAAGTGAACCATG+CGG + tig0019144:82563-82582 None:intergenic 40.0%
! AGTAATTGTGCCGTTGATGT+TGG - tig0019144:82600-82619 Msa1370970:CDS 40.0%
!! TCAAAGGATTTGTTAGACCC+TGG - tig0019144:82672-82691 Msa1370970:CDS 40.0%
GTGTTTCTCCTTATACCTTG+AGG + tig0019144:82801-82820 None:intergenic 40.0%
!!! GAAAGAGCTTTTGAGATAGC+AGG - tig0019144:82834-82853 Msa1370970:intron 40.0%
CAGGATGGTTCATCAAACAA+AGG - tig0019144:82853-82872 Msa1370970:intron 40.0%
ACTGGGCATGCTAGAAATAT+AGG - tig0019144:83215-83234 Msa1370970:CDS 40.0%
CTGGGCATGCTAGAAATATA+GGG - tig0019144:83216-83235 Msa1370970:CDS 40.0%
TGGGCATGCTAGAAATATAG+GGG - tig0019144:83217-83236 Msa1370970:CDS 40.0%
TTGTAGGAAATGTTCACTGC+AGG - tig0019144:83366-83385 Msa1370970:CDS 40.0%
TGTAGGAAATGTTCACTGCA+GGG - tig0019144:83367-83386 Msa1370970:CDS 40.0%
! AACCCTAACGAAAGTGCAAA+TGG - tig0019144:83449-83468 Msa1370970:CDS 40.0%
GTTCCATTTGCACTTTCGTT+AGG + tig0019144:83455-83474 None:intergenic 40.0%
! CGAAAGTGCAAATGGAACTA+AGG - tig0019144:83457-83476 Msa1370970:CDS 40.0%
!! TTGATCACTGCTTTGAGGTA+TGG + tig0019144:83532-83551 None:intergenic 40.0%
ATACCTCAAAGCAGTGATCA+AGG - tig0019144:83531-83550 Msa1370970:CDS 40.0%
GAACCAAAAAAGGAAGAGGT+GGG + tig0019144:83573-83592 None:intergenic 40.0%
TGAGGAACCAAAAAAGGAAG+AGG + tig0019144:83577-83596 None:intergenic 40.0%
!!! TCCTTTTTTGGTTCCTCACA+TGG - tig0019144:83579-83598 Msa1370970:CDS 40.0%
! CTTTCTGGCCAGAACAATAA+CGG + tig0019144:83706-83725 None:intergenic 40.0%
TTTGGCTGCATAAACCTTTC+TGG + tig0019144:83721-83740 None:intergenic 40.0%
AAGGTTTATGCAGCCAAACA+TGG - tig0019144:83723-83742 Msa1370970:CDS 40.0%
!!! ATATACCTTTTGGTTCGGGT+CGG - tig0019144:83773-83792 Msa1370970:CDS 40.0%
ATATTACGGGGTTGTGGGTT+TGG - tig0019144:82092-82111 Msa1370970:CDS 45.0%
TGGAAAATGTTGCCATCCAC+TGG + tig0019144:82213-82232 None:intergenic 45.0%
! GATGGCAACATTTTCCAGCT+AGG - tig0019144:82216-82235 Msa1370970:CDS 45.0%
ATTGTAAAGGACTCGTGTGG+TGG + tig0019144:82249-82268 None:intergenic 45.0%
ATGGTCCTATCATGACCCTT+TGG - tig0019144:82283-82302 Msa1370970:intron 45.0%
TGAGTGAACCTTCACTACCA+TGG + tig0019144:82428-82447 None:intergenic 45.0%
CTTCTCAATATGATGCGCAC+TGG - tig0019144:82451-82470 Msa1370970:CDS 45.0%
TGCAAAATGCATAGACCGCA+TGG - tig0019144:82545-82564 Msa1370970:CDS 45.0%
CTTGATAGATGAAGCTGCTG+TGG - tig0019144:82572-82591 Msa1370970:CDS 45.0%
!! GGATTTGTTAGACCCTGGAA+TGG - tig0019144:82677-82696 Msa1370970:CDS 45.0%
GGTCAAGCCACTTCAATATG+GGG + tig0019144:82779-82798 None:intergenic 45.0%
GGGTCAAGCCACTTCAATAT+GGG + tig0019144:82780-82799 None:intergenic 45.0%
AGGGTCAAGCCACTTCAATA+TGG + tig0019144:82781-82800 None:intergenic 45.0%
!!! GAGCTTTTGAGATAGCAGGA+TGG - tig0019144:82838-82857 Msa1370970:intron 45.0%
ATGTGCTCTTGCAGTTTCGT+GGG - tig0019144:82922-82941 Msa1370970:intron 45.0%
GACGACAAGCACACTAGAAT+GGG - tig0019144:83398-83417 Msa1370970:CDS 45.0%
AAGCACACTAGAATGGGTGA+TGG - tig0019144:83404-83423 Msa1370970:CDS 45.0%
GCACTTTCGTTAGGGTTCTT+GGG + tig0019144:83446-83465 None:intergenic 45.0%
TGCACTTTCGTTAGGGTTCT+TGG + tig0019144:83447-83466 None:intergenic 45.0%
! GGAGCAAAATAGGCTCTGAT+AGG - tig0019144:83478-83497 Msa1370970:CDS 45.0%
TCTCCTTGATCACTGCTTTG+AGG + tig0019144:83537-83556 None:intergenic 45.0%
!!! TCACCCACCTCTTCCTTTTT+TGG - tig0019144:83567-83586 Msa1370970:CDS 45.0%
GGAACCAAAAAAGGAAGAGG+TGG + tig0019144:83574-83593 None:intergenic 45.0%
GCCATGTGAGGAACCAAAAA+AGG + tig0019144:83583-83602 None:intergenic 45.0%
TCCAATCATGCAAGAGTCCA+TGG + tig0019144:83605-83624 None:intergenic 45.0%
TGAATGTTTGGGCAATTGGG+AGG - tig0019144:83659-83678 Msa1370970:CDS 45.0%
GAATGTTTGGGCAATTGGGA+GGG - tig0019144:83660-83679 Msa1370970:CDS 45.0%
CGTTATTGTTCTGGCCAGAA+AGG - tig0019144:83704-83723 Msa1370970:CDS 45.0%
CCAATCAAAGGAGTTGAGGA+GGG + tig0019144:83854-83873 None:intergenic 45.0%
TCCAATCAAAGGAGTTGAGG+AGG + tig0019144:83855-83874 None:intergenic 45.0%
ATGGACATGACAGAGGGAAT+GGG - tig0019144:83904-83923 Msa1370970:CDS 45.0%
GCAACAGGACTTCCTTTGTA+AGG + tig0019144:83973-83992 None:intergenic 45.0%
ATATTACGGGGTTGTGGGTT+TGG - tig0019144:82092-82111 Msa1370970:CDS 45.0%
TGGAAAATGTTGCCATCCAC+TGG + tig0019144:82213-82232 None:intergenic 45.0%
! GATGGCAACATTTTCCAGCT+AGG - tig0019144:82216-82235 Msa1370970:CDS 45.0%
ATTGTAAAGGACTCGTGTGG+TGG + tig0019144:82249-82268 None:intergenic 45.0%
ATGGTCCTATCATGACCCTT+TGG - tig0019144:82283-82302 Msa1370970:intron 45.0%
TGAGTGAACCTTCACTACCA+TGG + tig0019144:82428-82447 None:intergenic 45.0%
CTTCTCAATATGATGCGCAC+TGG - tig0019144:82451-82470 Msa1370970:CDS 45.0%
TGCAAAATGCATAGACCGCA+TGG - tig0019144:82545-82564 Msa1370970:CDS 45.0%
CTTGATAGATGAAGCTGCTG+TGG - tig0019144:82572-82591 Msa1370970:CDS 45.0%
!! GGATTTGTTAGACCCTGGAA+TGG - tig0019144:82677-82696 Msa1370970:CDS 45.0%
GGTCAAGCCACTTCAATATG+GGG + tig0019144:82779-82798 None:intergenic 45.0%
GGGTCAAGCCACTTCAATAT+GGG + tig0019144:82780-82799 None:intergenic 45.0%
AGGGTCAAGCCACTTCAATA+TGG + tig0019144:82781-82800 None:intergenic 45.0%
!!! GAGCTTTTGAGATAGCAGGA+TGG - tig0019144:82838-82857 Msa1370970:intron 45.0%
ATGTGCTCTTGCAGTTTCGT+GGG - tig0019144:82922-82941 Msa1370970:intron 45.0%
GACGACAAGCACACTAGAAT+GGG - tig0019144:83398-83417 Msa1370970:CDS 45.0%
AAGCACACTAGAATGGGTGA+TGG - tig0019144:83404-83423 Msa1370970:CDS 45.0%
GCACTTTCGTTAGGGTTCTT+GGG + tig0019144:83446-83465 None:intergenic 45.0%
TGCACTTTCGTTAGGGTTCT+TGG + tig0019144:83447-83466 None:intergenic 45.0%
! GGAGCAAAATAGGCTCTGAT+AGG - tig0019144:83478-83497 Msa1370970:CDS 45.0%
TCTCCTTGATCACTGCTTTG+AGG + tig0019144:83537-83556 None:intergenic 45.0%
!!! TCACCCACCTCTTCCTTTTT+TGG - tig0019144:83567-83586 Msa1370970:CDS 45.0%
GGAACCAAAAAAGGAAGAGG+TGG + tig0019144:83574-83593 None:intergenic 45.0%
GCCATGTGAGGAACCAAAAA+AGG + tig0019144:83583-83602 None:intergenic 45.0%
TCCAATCATGCAAGAGTCCA+TGG + tig0019144:83605-83624 None:intergenic 45.0%
TGAATGTTTGGGCAATTGGG+AGG - tig0019144:83659-83678 Msa1370970:CDS 45.0%
GAATGTTTGGGCAATTGGGA+GGG - tig0019144:83660-83679 Msa1370970:CDS 45.0%
CGTTATTGTTCTGGCCAGAA+AGG - tig0019144:83704-83723 Msa1370970:CDS 45.0%
CCAATCAAAGGAGTTGAGGA+GGG + tig0019144:83854-83873 None:intergenic 45.0%
TCCAATCAAAGGAGTTGAGG+AGG + tig0019144:83855-83874 None:intergenic 45.0%
ATGGACATGACAGAGGGAAT+GGG - tig0019144:83904-83923 Msa1370970:CDS 45.0%
GCAACAGGACTTCCTTTGTA+AGG + tig0019144:83973-83992 None:intergenic 45.0%
TTCCACCTGGACCAAGATGT+TGG - tig0019144:82187-82206 Msa1370970:CDS 50.0%
CCTAGCCAAAGGGTCATGAT+AGG + tig0019144:82291-82310 None:intergenic 50.0%
CCTATCATGACCCTTTGGCT+AGG - tig0019144:82288-82307 Msa1370970:intron 50.0%
GCACATGGAACCTAGCCAAA+GGG + tig0019144:82301-82320 None:intergenic 50.0%
TGCACATGGAACCTAGCCAA+AGG + tig0019144:82302-82321 None:intergenic 50.0%
TTAGACCCTGGAATGGAGAG+AGG - tig0019144:82684-82703 Msa1370970:CDS 50.0%
TAGACCCTGGAATGGAGAGA+GGG - tig0019144:82685-82704 Msa1370970:CDS 50.0%
GGGAAGAAATCCGCAACGTT+GGG + tig0019144:82759-82778 None:intergenic 50.0%
TTGAAGTGGCTTGACCCTCA+AGG - tig0019144:82783-82802 Msa1370970:intron 50.0%
GGCTTGACCCTCAAGGTATA+AGG - tig0019144:82790-82809 Msa1370970:intron 50.0%
GATGTGCTCTTGCAGTTTCG+TGG - tig0019144:82921-82940 Msa1370970:intron 50.0%
TGTGCTCTTGCAGTTTCGTG+GGG - tig0019144:82923-82942 Msa1370970:intron 50.0%
CGACGACAAGCACACTAGAA+TGG - tig0019144:83397-83416 Msa1370970:CDS 50.0%
! CACACTAGAATGGGTGATGG+CGG - tig0019144:83407-83426 Msa1370970:CDS 50.0%
! TTTGGTTCCTCACATGGCCA+TGG - tig0019144:83585-83604 Msa1370970:CDS 50.0%
GCCATGGACTCTTGCATGAT+TGG - tig0019144:83601-83620 Msa1370970:CDS 50.0%
TTGGGAGGGATCCAAAAGTG+TGG - tig0019144:83674-83693 Msa1370970:CDS 50.0%
! TGGGAGGGATCCAAAAGTGT+GGG - tig0019144:83675-83694 Msa1370970:CDS 50.0%
!! AACGGAGCATCCCACACTTT+TGG + tig0019144:83688-83707 None:intergenic 50.0%
GGGATGCTCCGTTATTGTTC+TGG - tig0019144:83695-83714 Msa1370970:CDS 50.0%
ATTCTCCGACCCGAACCAAA+AGG + tig0019144:83781-83800 None:intergenic 50.0%
CCCTCCTCAACTCCTTTGAT+TGG - tig0019144:83851-83870 Msa1370970:CDS 50.0%
! GTCTGATGGTCTTAAGCCAG+AGG - tig0019144:83879-83898 Msa1370970:CDS 50.0%
! TGGTCTTAAGCCAGAGGAGA+TGG - tig0019144:83885-83904 Msa1370970:CDS 50.0%
TCTGTCATGTCCATCTCCTC+TGG + tig0019144:83898-83917 None:intergenic 50.0%
AGAGGAGATGGACATGACAG+AGG - tig0019144:83897-83916 Msa1370970:CDS 50.0%
GAGGAGATGGACATGACAGA+GGG - tig0019144:83898-83917 Msa1370970:CDS 50.0%
GATGGACATGACAGAGGGAA+TGG - tig0019144:83903-83922 Msa1370970:CDS 50.0%
TGGACATGACAGAGGGAATG+GGG - tig0019144:83905-83924 Msa1370970:CDS 50.0%
TTCCACCTGGACCAAGATGT+TGG - tig0019144:82187-82206 Msa1370970:CDS 50.0%
CCTAGCCAAAGGGTCATGAT+AGG + tig0019144:82291-82310 None:intergenic 50.0%
CCTATCATGACCCTTTGGCT+AGG - tig0019144:82288-82307 Msa1370970:intron 50.0%
GCACATGGAACCTAGCCAAA+GGG + tig0019144:82301-82320 None:intergenic 50.0%
TGCACATGGAACCTAGCCAA+AGG + tig0019144:82302-82321 None:intergenic 50.0%
TTAGACCCTGGAATGGAGAG+AGG - tig0019144:82684-82703 Msa1370970:CDS 50.0%
TAGACCCTGGAATGGAGAGA+GGG - tig0019144:82685-82704 Msa1370970:CDS 50.0%
GGGAAGAAATCCGCAACGTT+GGG + tig0019144:82759-82778 None:intergenic 50.0%
TTGAAGTGGCTTGACCCTCA+AGG - tig0019144:82783-82802 Msa1370970:intron 50.0%
GGCTTGACCCTCAAGGTATA+AGG - tig0019144:82790-82809 Msa1370970:intron 50.0%
GATGTGCTCTTGCAGTTTCG+TGG - tig0019144:82921-82940 Msa1370970:intron 50.0%
TGTGCTCTTGCAGTTTCGTG+GGG - tig0019144:82923-82942 Msa1370970:intron 50.0%
CGACGACAAGCACACTAGAA+TGG - tig0019144:83397-83416 Msa1370970:CDS 50.0%
! CACACTAGAATGGGTGATGG+CGG - tig0019144:83407-83426 Msa1370970:CDS 50.0%
! TTTGGTTCCTCACATGGCCA+TGG - tig0019144:83585-83604 Msa1370970:CDS 50.0%
GCCATGGACTCTTGCATGAT+TGG - tig0019144:83601-83620 Msa1370970:CDS 50.0%
TTGGGAGGGATCCAAAAGTG+TGG - tig0019144:83674-83693 Msa1370970:CDS 50.0%
! TGGGAGGGATCCAAAAGTGT+GGG - tig0019144:83675-83694 Msa1370970:CDS 50.0%
!! AACGGAGCATCCCACACTTT+TGG + tig0019144:83688-83707 None:intergenic 50.0%
GGGATGCTCCGTTATTGTTC+TGG - tig0019144:83695-83714 Msa1370970:CDS 50.0%
ATTCTCCGACCCGAACCAAA+AGG + tig0019144:83781-83800 None:intergenic 50.0%
CCCTCCTCAACTCCTTTGAT+TGG - tig0019144:83851-83870 Msa1370970:CDS 50.0%
! GTCTGATGGTCTTAAGCCAG+AGG - tig0019144:83879-83898 Msa1370970:CDS 50.0%
! TGGTCTTAAGCCAGAGGAGA+TGG - tig0019144:83885-83904 Msa1370970:CDS 50.0%
TCTGTCATGTCCATCTCCTC+TGG + tig0019144:83898-83917 None:intergenic 50.0%
AGAGGAGATGGACATGACAG+AGG - tig0019144:83897-83916 Msa1370970:CDS 50.0%
GAGGAGATGGACATGACAGA+GGG - tig0019144:83898-83917 Msa1370970:CDS 50.0%
GATGGACATGACAGAGGGAA+TGG - tig0019144:83903-83922 Msa1370970:CDS 50.0%
TGGACATGACAGAGGGAATG+GGG - tig0019144:83905-83924 Msa1370970:CDS 50.0%
! CGGGGTTGTGGGTTTGGTAT+TGG - tig0019144:82098-82117 Msa1370970:CDS 55.0%
GGTATGGATGTGGCTGGCAA+TGG - tig0019144:82128-82147 Msa1370970:CDS 55.0%
GATGTGGCTGGCAATGGTGA+TGG - tig0019144:82134-82153 Msa1370970:CDS 55.0%
CTTGGTCATCAGCTTCCACC+TGG - tig0019144:82174-82193 Msa1370970:CDS 55.0%
ACTGGCCAACATCTTGGTCC+AGG + tig0019144:82195-82214 None:intergenic 55.0%
TGGACCAAGATGTTGGCCAG+TGG - tig0019144:82194-82213 Msa1370970:CDS 55.0%
CCATCCACTGGCCAACATCT+TGG + tig0019144:82201-82220 None:intergenic 55.0%
CCAAGATGTTGGCCAGTGGA+TGG - tig0019144:82198-82217 Msa1370970:CDS 55.0%
! GTGGTGGTGACAAACCTAGC+TGG + tig0019144:82233-82252 None:intergenic 55.0%
AGAGACAACCACGGTGCACA+TGG + tig0019144:82316-82335 None:intergenic 55.0%
AACAACGACGCAGCTCTTGC+AGG - tig0019144:82366-82385 Msa1370970:CDS 55.0%
AGTCGCTTAGACGCTATGCG+AGG - tig0019144:82516-82535 Msa1370970:CDS 55.0%
AGACCCTGGAATGGAGAGAG+GGG - tig0019144:82686-82705 Msa1370970:CDS 55.0%
TAGCCCCTCTCTCCATTCCA+GGG + tig0019144:82692-82711 None:intergenic 55.0%
TGCTGGGAAACCCAACGTTG+CGG - tig0019144:82746-82765 Msa1370970:intron 55.0%
GGGGAAGAAATCCGCAACGT+TGG + tig0019144:82760-82779 None:intergenic 55.0%
CTCTTGCAGTTTCGTGGGGA+TGG - tig0019144:82927-82946 Msa1370970:intron 55.0%
! TTTCGTGGGGATGGTGTCAG+CGG - tig0019144:82936-82955 Msa1370970:intron 55.0%
CAAGAGTCCATGGCCATGTG+AGG + tig0019144:83595-83614 None:intergenic 55.0%
CTGTTGCTGCTGCTGTTGCA+GGG - tig0019144:83986-84005 Msa1370970:CDS 55.0%
TGTTGCTGCTGCTGTTGCAG+GGG - tig0019144:83987-84006 Msa1370970:CDS 55.0%
! CGGGGTTGTGGGTTTGGTAT+TGG - tig0019144:82098-82117 Msa1370970:CDS 55.0%
GGTATGGATGTGGCTGGCAA+TGG - tig0019144:82128-82147 Msa1370970:CDS 55.0%
GATGTGGCTGGCAATGGTGA+TGG - tig0019144:82134-82153 Msa1370970:CDS 55.0%
CTTGGTCATCAGCTTCCACC+TGG - tig0019144:82174-82193 Msa1370970:CDS 55.0%
ACTGGCCAACATCTTGGTCC+AGG + tig0019144:82195-82214 None:intergenic 55.0%
TGGACCAAGATGTTGGCCAG+TGG - tig0019144:82194-82213 Msa1370970:CDS 55.0%
CCATCCACTGGCCAACATCT+TGG + tig0019144:82201-82220 None:intergenic 55.0%
CCAAGATGTTGGCCAGTGGA+TGG - tig0019144:82198-82217 Msa1370970:CDS 55.0%
! GTGGTGGTGACAAACCTAGC+TGG + tig0019144:82233-82252 None:intergenic 55.0%
AGAGACAACCACGGTGCACA+TGG + tig0019144:82316-82335 None:intergenic 55.0%
AACAACGACGCAGCTCTTGC+AGG - tig0019144:82366-82385 Msa1370970:CDS 55.0%
AGTCGCTTAGACGCTATGCG+AGG - tig0019144:82516-82535 Msa1370970:CDS 55.0%
AGACCCTGGAATGGAGAGAG+GGG - tig0019144:82686-82705 Msa1370970:CDS 55.0%
TAGCCCCTCTCTCCATTCCA+GGG + tig0019144:82692-82711 None:intergenic 55.0%
TGCTGGGAAACCCAACGTTG+CGG - tig0019144:82746-82765 Msa1370970:intron 55.0%
GGGGAAGAAATCCGCAACGT+TGG + tig0019144:82760-82779 None:intergenic 55.0%
CTCTTGCAGTTTCGTGGGGA+TGG - tig0019144:82927-82946 Msa1370970:intron 55.0%
! TTTCGTGGGGATGGTGTCAG+CGG - tig0019144:82936-82955 Msa1370970:intron 55.0%
CAAGAGTCCATGGCCATGTG+AGG + tig0019144:83595-83614 None:intergenic 55.0%
CTGTTGCTGCTGCTGTTGCA+GGG - tig0019144:83986-84005 Msa1370970:CDS 55.0%
TGTTGCTGCTGCTGTTGCAG+GGG - tig0019144:83987-84006 Msa1370970:CDS 55.0%
GGCCAACATCTTGGTCCAGG+TGG + tig0019144:82192-82211 None:intergenic 60.0%
GCTAGGTTCCATGTGCACCG+TGG - tig0019144:82305-82324 Msa1370970:intron 60.0%
ACGACGCAGCTCTTGCAGGA+AGG - tig0019144:82370-82389 Msa1370970:CDS 60.0%
CGCAGCTCTTGCAGGAAGGA+AGG - tig0019144:82374-82393 Msa1370970:CDS 60.0%
! ATGCGCACTGGCGCATGCTT+AGG - tig0019144:82463-82482 Msa1370970:CDS 60.0%
CTAGCCCCTCTCTCCATTCC+AGG + tig0019144:82693-82712 None:intergenic 60.0%
! TTCGTGGGGATGGTGTCAGC+GGG - tig0019144:82937-82956 Msa1370970:intron 60.0%
TTCGGGTCGGAGAATGTGCC+CGG - tig0019144:83786-83805 Msa1370970:CDS 60.0%
GGAGTTGAGGAGGGAGCCTA+GGG + tig0019144:83845-83864 None:intergenic 60.0%
AGGAGTTGAGGAGGGAGCCT+AGG + tig0019144:83846-83865 None:intergenic 60.0%
CCTGCAACAGCAGCAGCAAC+AGG + tig0019144:83988-84007 None:intergenic 60.0%
CCTGTTGCTGCTGCTGTTGC+AGG - tig0019144:83985-84004 Msa1370970:CDS 60.0%
GGCCAACATCTTGGTCCAGG+TGG + tig0019144:82192-82211 None:intergenic 60.0%
GCTAGGTTCCATGTGCACCG+TGG - tig0019144:82305-82324 Msa1370970:intron 60.0%
ACGACGCAGCTCTTGCAGGA+AGG - tig0019144:82370-82389 Msa1370970:CDS 60.0%
CGCAGCTCTTGCAGGAAGGA+AGG - tig0019144:82374-82393 Msa1370970:CDS 60.0%
! ATGCGCACTGGCGCATGCTT+AGG - tig0019144:82463-82482 Msa1370970:CDS 60.0%
CTAGCCCCTCTCTCCATTCC+AGG + tig0019144:82693-82712 None:intergenic 60.0%
! TTCGTGGGGATGGTGTCAGC+GGG - tig0019144:82937-82956 Msa1370970:intron 60.0%
TTCGGGTCGGAGAATGTGCC+CGG - tig0019144:83786-83805 Msa1370970:CDS 60.0%
GGAGTTGAGGAGGGAGCCTA+GGG + tig0019144:83845-83864 None:intergenic 60.0%
AGGAGTTGAGGAGGGAGCCT+AGG + tig0019144:83846-83865 None:intergenic 60.0%
CCTGCAACAGCAGCAGCAAC+AGG + tig0019144:83988-84007 None:intergenic 60.0%
CCTGTTGCTGCTGCTGTTGC+AGG - tig0019144:83985-84004 Msa1370970:CDS 60.0%
! GGAAGCACACGCGAGGCAAG+CGG + tig0019144:83817-83836 None:intergenic 65.0%
TGCCTCGCGTGTGCTTCCAC+TGG - tig0019144:83819-83838 Msa1370970:CDS 65.0%
CGTGTGCTTCCACTGGCCCT+AGG - tig0019144:83826-83845 Msa1370970:CDS 65.0%
! GGAAGCACACGCGAGGCAAG+CGG + tig0019144:83817-83836 None:intergenic 65.0%
TGCCTCGCGTGTGCTTCCAC+TGG - tig0019144:83819-83838 Msa1370970:CDS 65.0%
CGTGTGCTTCCACTGGCCCT+AGG - tig0019144:83826-83845 Msa1370970:CDS 65.0%
GCGAGGCAAGCGGCAATGCC+GGG + tig0019144:83807-83826 None:intergenic 70.0%
CGCGAGGCAAGCGGCAATGC+CGG + tig0019144:83808-83827 None:intergenic 70.0%
! GGCCAGTGGAAGCACACGCG+AGG + tig0019144:83824-83843 None:intergenic 70.0%
AGGAGGGAGCCTAGGGCCAG+TGG + tig0019144:83838-83857 None:intergenic 70.0%
GCGAGGCAAGCGGCAATGCC+GGG + tig0019144:83807-83826 None:intergenic 70.0%
CGCGAGGCAAGCGGCAATGC+CGG + tig0019144:83808-83827 None:intergenic 70.0%
! GGCCAGTGGAAGCACACGCG+AGG + tig0019144:83824-83843 None:intergenic 70.0%
AGGAGGGAGCCTAGGGCCAG+TGG + tig0019144:83838-83857 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0019144 gene 82087 84014 82087 ID=Msa1370970;Name=Msa1370970
tig0019144 mRNA 82087 84014 82087 ID=Msa1370970-mRNA-1;Parent=Msa1370970;Name=Msa1370970-mRNA-1;_AED=0.06;_eAED=0.20;_QI=0|0|0|1|1|1|3|0|484
tig0019144 exon 83100 84014 83100 ID=Msa1370970-mRNA-1:exon:2044;Parent=Msa1370970-mRNA-1
tig0019144 exon 82357 82729 82357 ID=Msa1370970-mRNA-1:exon:2043;Parent=Msa1370970-mRNA-1
tig0019144 exon 82087 82253 82087 ID=Msa1370970-mRNA-1:exon:2042;Parent=Msa1370970-mRNA-1
tig0019144 CDS 83100 84014 83100 ID=Msa1370970-mRNA-1:cds;Parent=Msa1370970-mRNA-1
tig0019144 CDS 82357 82729 82357 ID=Msa1370970-mRNA-1:cds;Parent=Msa1370970-mRNA-1
tig0019144 CDS 82087 82253 82087 ID=Msa1370970-mRNA-1:cds;Parent=Msa1370970-mRNA-1
Gene Sequence

>Msa1370970

ATGGAATATTACGGGGTTGTGGGTTTGGTATTGGCTATTTTGGTATGGATGTGGCTGGCAATGGTGATGGAACATAGAAGAGTGAAACTTGGTCATCAGCTTCCACCTGGACCAAGATGTTGGCCAGTGGATGGCAACATTTTCCAGCTAGGTTTGTCACCACCACACGAGTCCTTTACAATACTGTCTCGTAAACATGGTCCTATCATGACCCTTTGGCTAGGTTCCATGTGCACCGTGGTTGTCTCTTCTTGTGAAGCAGCCCGTGACATGTTCAAAAACAACGACGCAGCTCTTGCAGGAAGGAAGGTTTATGAAGCCATGAAAGGGAATCATAACCATGGTAGTGAAGGTTCACTCATAACTTCTCAATATGATGCGCACTGGCGCATGCTTAGGCGCTTGAGCACCACTGAGTTCTTTGTGACTAGTCGCTTAGACGCTATGCGAGGTGTGCGTGCAAAATGCATAGACCGCATGGTTCACTTGATAGATGAAGCTGCTGTGGAGTCTAGTAATTGTGCCGTTGATGTTGGCAAATTCTTTTTCTTGATGGCTTTTAACCTCATTGGGAACCTTATTTTTTCAAAGGATTTGTTAGACCCTGGAATGGAGAGAGGGGCTAGATTCTATTATCATGCGATTAAGGTTATGAAATATGCTGGGAAACCCAACGTTGCGGATTTCTTCCCCATATTGAAGTGGCTTGACCCTCAAGGTATAAGGAGAAACACACAGTTCCATGTTGAAAGAGCTTTTGAGATAGCAGGATGGTTCATCAAACAAAGGATGGAAAATGATATTGTTGGAAATGGAAACACTAAAGACTTCTTGGATGTGCTCTTGCAGTTTCGTGGGGATGGTGTCAGCGGGCCCTACAGTTTTACTTCAAGAACTATTAACGTTGTTGTCTTTGAAATGTTCACTGCAGGGACAGACACGACGACAAGCACACTAGAATGGGTGATGGCGGAGCTTCTGCACAACCCAAGAACCCTAACGAAAGTGCAAATGGAACTAAGGAGCAAAATAGGCTCTGATAGGAAAATGGAAGAAAAGGACATAGAGTCTTCCATACCTCAAAGCAGTGATCAAGGAGACGTTGAGACTTCACCCACCTCTTCCTTTTTTGGTTCCTCACATGGCCATGGACTCTTGCATGATTGGAGACTACTTCATTCCAAAAGAGACACAAATTTTAGTGAATGTTTGGGCAATTGGGAGGGATCCAAAAGTGTGGGATGCTCCGTTATTGTTCTGGCCAGAAAGGTTTATGCAGCCAAACATGGCTCCCTCCTCAACTCCTTTGATTGGATTTTGTCTGATGGTCTTAAGCCAGAGGAGATGGACATGACAGAGGGAATGGGGATAACTTTGAGAAAAGTTGTTCCTTTGAAAGTCATACATGTACCTTACAAAGGAAGTCCTGTTGCTGCTGCTGTTGCAGGGGAATGA
Protein sequence

>Msa1370970

MEYYGVVGLVLAILVWMWLAMVMEHRRVKLGHQLPPGPRCWPVDGNIFQLGLSPPHESFTILSRKHGPIMTLWLGSMCTVVVSSCEAARDMFKNNDAALAGRKVYEAMKGNHNHGSEGSLITSQYDAHWRMLRRLSTTEFFVTSRLDAMRGVRAKCIDRMVHLIDEAAVESSNCAVDVGKFFFLMAFNLIGNLIFSKDLLDPGMERGARFYYHAIKVMKYAGKPNVADFFPILKWLDPQGIRRNTQFHVERAFEIAGWFIKQRMENDIVGNGNTKDFLDVLLQFRGDGVSGPYSFTSRTINVVVFEMFTAGTDTTTSTLEWVMAELLHNPRTLTKVQMELRSKIGSDRKMEEKDIESSIPQSSDQGDVETSPTSSFFGSSHGHGLLHDWRLLHSKRDTNFSECLGNWEGSKSVGCSVIVLARKVYAAKHGSLLNSFDWILSDGLKPEEMDMTEGMGITLRKVVPLKVIHVPYKGSPVAAAVAGE*