AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0657860

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0657860 MtrunA17_Chr8g0380471 97.077 479 14 0 1 479 1 479 0.0 964
Msa0657860 MtrunA17_Chr8g0388921 52.979 470 214 2 13 475 7 476 0.0 518
Msa0657860 MtrunA17_Chr8g0380931 38.395 461 269 8 22 474 50 503 8.00e-112 340
Msa0657860 MtrunA17_Chr5g0443731 38.514 444 269 4 34 475 29 470 3.86e-109 332
Msa0657860 MtrunA17_Chr5g0443401 37.832 452 268 8 31 477 35 478 3.78e-105 322
Msa0657860 MtrunA17_Chr3g0107511 37.421 473 283 8 11 475 9 476 1.31e-104 320
Msa0657860 MtrunA17_Chr3g0107501 36.667 450 273 6 33 475 32 476 4.69e-102 313
Msa0657860 MtrunA17_Chr8g0369791 32.917 480 297 13 1 473 1 462 4.57e-77 248
Msa0657860 MtrunA17_Chr7g0226771 32.510 486 307 11 1 479 2 473 5.25e-76 246
Msa0657860 MtrunA17_Chr5g0403931 33.124 477 299 12 9 474 11 478 6.78e-76 246
Msa0657860 MtrunA17_Chr5g0408181 32.988 482 296 14 1 475 1 462 8.75e-74 240
Msa0657860 MtrunA17_Chr4g0044851 30.512 449 295 9 29 473 32 467 3.67e-65 218
Msa0657860 MtrunA17_Chr5g0397971 27.027 444 313 7 34 473 31 467 1.13e-61 208
Msa0657860 MtrunA17_Chr3g0113321 29.978 457 297 15 25 471 20 463 2.23e-59 202
Msa0657860 MtrunA17_Chr1g0153371 28.025 471 324 7 8 472 4 465 2.31e-59 202
Msa0657860 MtrunA17_Chr5g0400421 29.053 475 321 10 6 467 10 481 8.86e-59 201
Msa0657860 MtrunA17_Chr8g0341951 28.194 454 307 11 4 448 3 446 1.31e-58 200
Msa0657860 MtrunA17_Chr3g0141801 28.509 456 303 11 30 473 37 481 6.03e-58 199
Msa0657860 MtrunA17_Chr8g0372411 27.640 445 303 9 35 471 40 473 2.59e-57 197
Msa0657860 MtrunA17_Chr4g0044841 29.241 448 299 10 31 473 35 469 4.57e-57 196
Msa0657860 MtrunA17_Chr7g0219961 29.759 457 291 15 27 474 26 461 1.06e-55 192
Msa0657860 MtrunA17_Chr1g0164371 29.399 466 313 9 12 473 20 473 1.54e-55 192
Msa0657860 MtrunA17_Chr3g0078411 27.706 462 295 11 27 474 26 462 2.85e-55 191
Msa0657860 MtrunA17_Chr8g0373441 31.750 400 258 10 14 406 13 404 3.22e-54 187
Msa0657860 MtrunA17_Chr2g0293411 29.025 441 307 5 30 465 37 476 6.13e-54 188
Msa0657860 MtrunA17_Chr6g0455461 27.273 462 297 10 27 474 26 462 8.26e-54 187
Msa0657860 MtrunA17_Chr8g0372711 28.315 445 302 6 37 474 49 483 1.78e-52 184
Msa0657860 MtrunA17_Chr8g0381541 26.371 474 335 8 7 467 8 480 5.48e-52 183
Msa0657860 MtrunA17_Chr2g0293421 27.149 442 317 5 27 465 38 477 2.91e-51 181
Msa0657860 MtrunA17_Chr8g0339861 26.947 475 322 9 11 468 12 478 1.06e-50 179
Msa0657860 MtrunA17_Chr8g0381571 27.069 447 312 8 7 440 8 453 5.22e-50 177
Msa0657860 MtrunA17_Chr5g0400411 28.059 474 326 9 6 467 10 480 8.36e-48 172
Msa0657860 MtrunA17_Chr6g0478161 24.587 484 334 11 12 477 21 491 1.41e-46 168
Msa0657860 MtrunA17_Chr3g0089361 26.126 444 317 7 34 474 40 475 9.02e-45 163
Msa0657860 MtrunA17_Chr3g0089351 26.119 402 287 7 74 474 1 393 3.67e-42 154
Msa0657860 MtrunA17_Chr5g0404861 35.862 145 89 2 333 475 16 158 1.08e-25 102
Msa0657860 MtrunA17_Chr0c19g0493771 31.937 191 120 3 268 452 436 622 4.45e-25 108
Msa0657860 MtrunA17_Chr8g0354531 26.382 398 234 16 116 474 266 643 3.24e-23 103
Msa0657860 MtrunA17_Chr8g0381551 24.688 320 228 7 7 314 8 326 4.11e-23 100
Msa0657860 MtrunA17_Chr8g0334891 24.449 454 293 11 26 453 30 459 1.27e-22 100
Msa0657860 MtrunA17_Chr2g0313821 27.027 370 232 12 110 450 129 489 7.19e-22 98.6
Msa0657860 MtrunA17_Chr7g0260821 22.967 492 303 20 32 474 37 501 7.56e-22 98.2
Msa0657860 MtrunA17_Chr6g0463541 38.318 107 65 1 368 474 3 108 8.12e-22 90.5
Msa0657860 MtrunA17_Chr2g0307291 25.385 390 254 11 114 474 135 516 3.73e-20 93.2
Msa0657860 MtrunA17_Chr5g0437001 38.889 108 63 2 339 443 1 108 3.83e-20 87.4
Msa0657860 MtrunA17_Chr1g0198191 24.951 513 292 20 11 464 21 499 4.77e-20 92.8
Msa0657860 MtrunA17_Chr8g0334941 26.224 286 184 7 184 453 30 304 5.31e-20 90.9
Msa0657860 MtrunA17_Chr7g0260831 21.901 484 316 19 32 473 36 499 7.51e-20 92.4
Msa0657860 MtrunA17_Chr1g0179811 26.766 269 170 7 224 474 278 537 1.04e-19 92.0
Msa0657860 MtrunA17_Chr2g0307301 24.938 401 238 11 114 477 135 509 1.36e-19 91.7
Msa0657860 MtrunA17_Chr6g0457421 27.972 286 179 11 207 475 231 506 1.87e-19 91.3
Msa0657860 MtrunA17_Chr3g0128461 29.297 256 159 9 230 474 278 522 2.68e-19 90.5
Msa0657860 MtrunA17_Chr7g0215181 25.641 273 184 7 215 475 243 508 3.42e-19 90.1
Msa0657860 MtrunA17_Chr2g0313791 27.875 287 168 10 215 474 235 509 3.61e-19 90.1
Msa0657860 MtrunA17_Chr5g0401691 28.571 224 148 4 234 448 256 476 4.09e-19 90.1
Msa0657860 MtrunA17_Chr5g0404881 28.502 207 138 6 27 228 28 229 4.10e-19 86.3
Msa0657860 MtrunA17_Chr4g0056951 31.222 221 138 7 237 448 262 477 4.17e-19 90.1
Msa0657860 MtrunA17_Chr8g0336361 25.826 333 173 12 199 473 239 555 5.60e-19 89.7
Msa0657860 MtrunA17_Chr1g0203141 26.415 265 171 8 224 475 261 514 8.66e-19 89.0
Msa0657860 MtrunA17_Chr1g0203151 27.170 265 169 8 224 475 257 510 9.01e-19 89.0
Msa0657860 MtrunA17_Chr6g0472221 28.626 262 165 8 227 475 273 525 9.02e-19 89.0
Msa0657860 MtrunA17_Chr4g0000151 35.514 107 69 0 359 465 25 131 1.63e-18 82.0
Msa0657860 MtrunA17_Chr2g0286091 22.961 466 320 13 30 467 37 491 1.96e-18 87.8
Msa0657860 MtrunA17_Chr8g0354571 26.173 405 237 16 111 474 139 522 3.45e-18 87.4
Msa0657860 MtrunA17_Chr3g0089381 28.646 192 131 4 179 369 4 190 3.76e-18 83.2
Msa0657860 MtrunA17_Chr4g0000171 23.827 277 206 4 34 308 43 316 4.68e-18 85.5
Msa0657860 MtrunA17_Chr1g0161671 23.891 293 217 4 27 314 20 311 9.20e-18 84.3
Msa0657860 MtrunA17_Chr5g0429651 26.408 284 180 10 217 475 228 507 1.69e-17 85.1
Msa0657860 MtrunA17_Chr2g0288661 23.724 392 258 11 114 474 135 516 1.90e-17 85.1
Msa0657860 MtrunA17_Chr1g0160861 32.370 173 109 4 283 450 137 306 2.70e-17 83.2
Msa0657860 MtrunA17_Chr2g0313751 25.995 377 219 11 114 450 160 516 2.88e-17 84.3
Msa0657860 MtrunA17_Chr1g0160851 30.097 206 133 6 251 450 265 465 4.82e-17 83.6
Msa0657860 MtrunA17_Chr7g0235261 26.761 284 173 10 209 473 240 507 7.46e-17 83.2
Msa0657860 MtrunA17_Chr2g0313781 26.573 286 173 10 215 474 252 526 1.08e-16 82.8
Msa0657860 MtrunA17_Chr2g0313761 25.333 375 224 10 114 450 128 484 1.36e-16 82.4
Msa0657860 MtrunA17_Chr4g0000161 25.175 286 207 5 26 308 35 316 1.64e-16 80.9
Msa0657860 MtrunA17_Chr4g0035921 26.641 259 161 7 217 450 227 481 2.33e-16 81.6
Msa0657860 MtrunA17_Chr4g0057001 29.412 221 145 7 237 450 268 484 2.59e-16 81.3
Msa0657860 MtrunA17_Chr8g0381561 30.909 110 76 0 338 447 2 111 2.69e-16 75.5
Msa0657860 MtrunA17_Chr2g0313831 24.565 517 329 19 6 474 11 514 2.88e-16 81.3
Msa0657860 MtrunA17_Chr2g0313801 23.664 393 257 12 114 474 133 514 4.27e-16 80.9
Msa0657860 MtrunA17_Chr4g0004601 25.763 295 181 9 203 473 248 528 4.74e-16 80.5
Msa0657860 MtrunA17_Chr1g0184421 26.667 255 150 9 227 466 252 484 4.94e-16 80.5
Msa0657860 MtrunA17_Chr1g0193811 26.568 271 179 8 217 475 253 515 5.24e-16 80.5
Msa0657860 MtrunA17_Chr4g0014051 24.808 391 250 13 114 477 146 519 7.08e-16 80.1
Msa0657860 MtrunA17_Chr6g0463551 30.380 158 98 3 217 367 33 185 7.34e-16 76.3
Msa0657860 MtrunA17_Chr4g0053621 26.761 213 150 5 245 455 262 470 7.99e-16 79.7
Msa0657860 MtrunA17_Chr8g0354511 25.266 376 228 12 111 450 139 497 8.92e-16 79.7
Msa0657860 MtrunA17_Chr8g0346261 26.991 226 149 5 231 448 296 513 9.72e-16 79.7
Msa0657860 MtrunA17_Chr5g0436981 33.094 139 89 4 30 166 24 160 1.05e-15 75.5
Msa0657860 MtrunA17_Chr3g0104351 24.031 387 252 13 108 458 116 496 1.22e-15 79.3
Msa0657860 MtrunA17_Chr4g0011851 30.811 185 114 5 283 460 14 191 1.54e-15 75.5
Msa0657860 MtrunA17_Chr5g0431511 26.515 264 175 7 198 450 215 470 1.56e-15 79.0
Msa0657860 MtrunA17_Chr4g0038271 26.016 246 165 6 221 451 291 534 1.70e-15 79.0
Msa0657860 MtrunA17_Chr2g0280081 29.947 187 122 3 271 448 787 973 2.02e-15 79.3
Msa0657860 MtrunA17_Chr2g0280081 28.571 203 131 4 271 459 286 488 2.42e-12 69.7
Msa0657860 MtrunA17_Chr1g0184461 23.617 470 287 19 41 466 43 484 2.05e-15 78.6
Msa0657860 MtrunA17_Chr2g0280011 30.233 172 111 3 286 448 9 180 2.11e-15 75.1
Msa0657860 MtrunA17_Chr8g0339331 25.758 264 170 9 224 473 249 500 2.67e-15 78.2
Msa0657860 MtrunA17_Chr6g0458561 30.500 200 122 5 281 473 324 513 3.10e-15 78.2
Msa0657860 MtrunA17_Chr5g0403321 30.455 220 134 7 241 450 264 474 3.77e-15 77.8
Msa0657860 MtrunA17_Chr8g0339311 26.459 257 161 7 242 476 279 529 3.88e-15 77.8
Msa0657860 MtrunA17_Chr5g0401681 27.919 197 133 5 255 448 269 459 3.93e-15 77.8
Msa0657860 MtrunA17_Chr8g0362731 27.397 219 137 6 268 477 194 399 5.09e-15 77.0
Msa0657860 MtrunA17_Chr1g0204271 25.828 302 191 11 197 471 206 501 5.12e-15 77.4
Msa0657860 MtrunA17_Chr2g0313771 23.715 506 302 18 6 450 14 496 5.22e-15 77.4
Msa0657860 MtrunA17_Chr5g0403331 30.233 172 110 4 285 450 305 472 1.03e-14 76.3
Msa0657860 MtrunA17_Chr7g0235551 27.049 244 161 6 223 456 244 480 1.18e-14 76.3
Msa0657860 MtrunA17_Chr1g0174441 26.953 256 167 6 211 450 246 497 1.19e-14 76.3
Msa0657860 MtrunA17_Chr8g0364651 26.126 222 153 4 241 454 254 472 1.59e-14 75.9
Msa0657860 MtrunA17_Chr4g0039391 27.004 237 155 6 234 455 242 475 1.81e-14 75.5
Msa0657860 MtrunA17_Chr2g0313811 25.161 310 199 10 165 450 201 501 1.92e-14 75.5
Msa0657860 MtrunA17_Chr5g0446131 25.000 372 229 11 114 450 131 487 2.20e-14 75.5
Msa0657860 MtrunA17_Chr5g0403351 25.792 221 146 6 241 450 258 471 2.58e-14 75.1
Msa0657860 MtrunA17_Chr2g0314731 27.426 237 158 6 243 473 255 483 2.83e-14 75.1
Msa0657860 MtrunA17_Chr2g0296651 27.805 205 143 4 248 451 262 462 3.80e-14 74.7
Msa0657860 MtrunA17_Chr1g0205361 30.409 171 111 3 285 450 298 465 3.96e-14 74.7
Msa0657860 MtrunA17_Chr1g0164321 24.896 241 160 4 228 451 285 521 4.22e-14 74.7
Msa0657860 MtrunA17_Chr1g0174481 27.686 242 156 6 222 450 235 470 4.48e-14 74.3
Msa0657860 MtrunA17_Chr2g0280071 28.571 189 126 3 271 450 319 507 4.73e-14 74.7
Msa0657860 MtrunA17_Chr8g0351421 26.190 252 167 7 241 475 260 509 4.83e-14 74.3
Msa0657860 MtrunA17_Chr3g0101611 26.756 299 194 10 174 451 178 472 5.07e-14 74.3
Msa0657860 MtrunA17_Chr1g0176831 25.431 232 160 4 248 474 291 514 6.20e-14 73.9
Msa0657860 MtrunA17_Chr8g0351401 24.016 254 177 5 238 475 256 509 6.88e-14 73.9
Msa0657860 MtrunA17_Chr8g0373431 45.902 61 32 1 414 474 5 64 6.92e-14 66.6
Msa0657860 MtrunA17_Chr1g0156101 27.344 256 164 8 213 450 228 479 6.99e-14 73.9
Msa0657860 MtrunA17_Chr1g0174461 26.389 216 145 6 240 447 263 472 7.94e-14 73.6
Msa0657860 MtrunA17_Chr1g0174451 25.581 258 174 4 207 450 223 476 9.26e-14 73.6
Msa0657860 MtrunA17_Chr4g0011961 29.825 171 112 3 285 450 296 463 9.30e-14 73.6
Msa0657860 MtrunA17_Chr4g0020041 26.446 242 156 7 221 450 239 470 1.03e-13 73.2
Msa0657860 MtrunA17_Chr7g0265611 26.754 228 149 5 235 450 264 485 1.04e-13 73.2
Msa0657860 MtrunA17_Chr8g0362481 27.459 244 159 7 222 450 166 406 1.06e-13 73.2
Msa0657860 MtrunA17_Chr4g0013471 22.449 294 218 6 34 325 43 328 1.23e-13 72.4
Msa0657860 MtrunA17_Chr2g0314721 26.407 231 157 5 248 473 272 494 1.30e-13 72.8
Msa0657860 MtrunA17_Chr4g0063221 26.354 277 178 9 215 471 244 514 1.34e-13 73.2
Msa0657860 MtrunA17_Chr4g0026941 25.287 261 176 8 221 473 287 536 1.55e-13 72.8
Msa0657860 MtrunA17_Chr6g0463621 28.571 196 126 4 286 472 1 191 1.56e-13 69.7
Msa0657860 MtrunA17_Chr8g0351461 25.296 253 168 8 241 475 259 508 1.69e-13 72.8
Msa0657860 MtrunA17_Chr4g0052861 27.155 232 157 6 232 456 240 466 1.95e-13 72.4
Msa0657860 MtrunA17_Chr2g0280121 29.381 194 127 4 266 450 288 480 2.35e-13 72.0
Msa0657860 MtrunA17_Chr7g0255131 26.446 242 157 8 249 474 270 506 2.72e-13 72.0
Msa0657860 MtrunA17_Chr5g0446161 27.962 211 137 4 250 450 263 468 3.17e-13 71.6
Msa0657860 MtrunA17_Chr1g0161661 35.443 79 51 0 387 465 11 89 3.67e-13 65.5
Msa0657860 MtrunA17_Chr8g0351441 25.296 253 168 8 241 475 259 508 4.64e-13 71.2
Msa0657860 MtrunA17_Chr7g0248991 30.345 145 97 2 268 412 218 358 4.94e-13 70.5
Msa0657860 MtrunA17_Chr6g0451781 28.936 235 146 9 224 441 291 521 5.75e-13 71.2
Msa0657860 MtrunA17_Chr5g0396521 25.792 221 119 6 267 450 330 542 6.04e-13 70.9
Msa0657860 MtrunA17_Chr3g0101731 24.691 243 171 6 217 450 230 469 7.24e-13 70.5
Msa0657860 MtrunA17_Chr4g0058281 25.926 216 152 3 240 450 269 481 7.64e-13 70.5
Msa0657860 MtrunA17_Chr6g0451811 30.636 173 102 7 282 441 2 169 8.05e-13 67.8
Msa0657860 MtrunA17_Chr6g0463791 30.114 176 110 3 288 455 300 470 9.54e-13 70.1
Msa0657860 MtrunA17_Chr8g0387001 26.104 249 145 8 227 451 246 479 9.72e-13 70.1
Msa0657860 MtrunA17_Chr1g0162811 28.324 173 117 2 282 450 299 468 1.16e-12 70.1
Msa0657860 MtrunA17_Chr5g0395331 29.208 202 133 5 255 450 275 472 1.17e-12 70.1
Msa0657860 MtrunA17_Chr1g0174431 29.379 177 111 4 285 450 1 174 1.22e-12 67.0
Msa0657860 MtrunA17_Chr8g0372251 24.454 229 148 6 239 450 253 473 1.40e-12 69.7
Msa0657860 MtrunA17_Chr8g0362701 26.022 269 178 7 217 470 230 492 1.41e-12 69.7
Msa0657860 MtrunA17_Chr5g0419691 31.138 167 105 4 308 469 320 481 1.50e-12 69.7
Msa0657860 MtrunA17_Chr7g0258211 26.630 184 113 3 283 450 303 480 2.01e-12 69.3
Msa0657860 MtrunA17_Chr4g0046331 27.374 179 112 5 288 453 304 477 2.03e-12 69.3
Msa0657860 MtrunA17_Chr8g0351801 28.022 182 114 3 283 450 308 486 2.07e-12 69.3
Msa0657860 MtrunA17_Chr5g0405001 24.506 253 163 6 220 454 241 483 2.16e-12 69.3
Msa0657860 MtrunA17_Chr7g0218601 26.616 263 162 10 220 470 239 482 2.54e-12 68.9
Msa0657860 MtrunA17_Chr5g0400391 34.568 81 53 0 389 469 1 81 4.19e-12 62.8
Msa0657860 MtrunA17_Chr4g0011941 29.240 171 113 4 285 450 1 168 4.49e-12 65.1
Msa0657860 MtrunA17_Chr8g0387101 27.749 191 128 3 271 451 287 477 4.66e-12 68.2
Msa0657860 MtrunA17_Chr1g0174471 27.397 219 146 4 240 450 278 491 5.82e-12 67.8
Msa0657860 MtrunA17_Chr2g0296661 28.497 193 133 4 258 449 277 465 8.88e-12 67.0
Msa0657860 MtrunA17_Chr6g0451741 30.303 231 138 10 224 438 279 502 9.43e-12 67.4
Msa0657860 MtrunA17_Chr6g0451681 26.606 218 145 6 237 446 228 438 1.15e-11 66.6
Msa0657860 MtrunA17_Chr1g0161641 34.211 76 50 0 372 447 13 88 1.16e-11 60.8
Msa0657860 MtrunA17_Chr8g0348751 23.954 263 173 10 232 473 251 507 1.40e-11 66.6
Msa0657860 MtrunA17_Chr5g0445531 25.368 272 183 8 195 450 200 467 1.99e-11 66.2
Msa0657860 MtrunA17_Chr6g0466941 27.778 216 137 8 241 441 271 482 2.08e-11 66.2
Msa0657860 MtrunA17_Chr8g0354541 29.508 183 113 6 301 474 1 176 2.23e-11 62.8
Msa0657860 MtrunA17_Chr7g0218611 24.370 238 166 5 219 449 237 467 2.31e-11 65.9
Msa0657860 MtrunA17_Chr4g0052881 27.136 199 140 3 251 448 266 460 2.65e-11 65.9
Msa0657860 MtrunA17_Chr2g0280041 28.571 189 126 3 271 450 318 506 4.35e-11 65.1
Msa0657860 MtrunA17_Chr1g0205371 32.164 171 108 3 285 450 299 466 5.97e-11 64.7
Msa0657860 MtrunA17_Chr8g0382901 27.966 236 155 8 224 450 214 443 6.71e-11 65.1
Msa0657860 MtrunA17_Chr1g0178971 24.176 273 173 8 226 475 250 511 7.92e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0657860 AT5G36110.1 48.098 447 224 3 33 475 33 475 1.19e-150 438
Msa0657860 AT5G36110.2 44.729 351 187 2 33 380 33 379 1.85e-101 309
Msa0657860 AT2G42850.1 35.590 458 282 8 22 475 34 482 3.14e-92 289
Msa0657860 AT5G45340.1 35.220 477 289 10 1 474 1 460 1.60e-90 283
Msa0657860 AT4G19230.1 33.902 469 285 10 13 473 8 459 1.36e-83 266
Msa0657860 AT5G45340.2 34.667 450 274 10 1 447 1 433 5.64e-80 256
Msa0657860 AT5G36140.1 40.803 299 172 2 19 316 17 311 1.46e-77 245
Msa0657860 AT4G19230.2 33.333 444 271 10 13 448 8 434 1.76e-74 243
Msa0657860 AT3G19270.2 31.478 467 306 8 6 470 6 460 5.67e-73 238
Msa0657860 AT2G29090.2 29.712 451 302 8 28 475 43 481 8.03e-70 230
Msa0657860 AT2G29090.1 29.712 451 302 8 28 475 43 481 8.03e-70 230
Msa0657860 AT3G50660.1 31.470 483 282 11 31 473 36 509 1.68e-68 228
Msa0657860 AT3G19270.1 31.236 445 292 8 6 448 6 438 1.62e-66 221
Msa0657860 AT1G12740.1 27.865 445 310 8 34 474 31 468 8.24e-64 214
Msa0657860 AT1G12740.4 27.494 451 310 9 34 474 31 474 1.75e-61 208
Msa0657860 AT1G12740.2 27.273 451 311 9 34 474 31 474 4.30e-61 207
Msa0657860 AT4G36380.1 29.148 446 305 8 34 473 69 509 3.34e-60 206
Msa0657860 AT2G29090.3 31.792 346 227 5 132 475 48 386 4.04e-60 202
Msa0657860 AT5G05690.1 29.911 448 293 11 32 471 29 463 6.32e-59 201
Msa0657860 AT2G32440.2 28.785 469 316 8 12 467 15 478 3.80e-58 200
Msa0657860 AT2G32440.1 28.785 469 316 8 12 467 15 478 3.80e-58 200
Msa0657860 AT1G19630.1 26.737 475 337 9 6 474 4 473 7.24e-57 196
Msa0657860 AT3G13730.1 27.740 447 307 9 35 474 52 489 1.60e-55 192
Msa0657860 AT5G14400.2 28.635 447 283 10 39 478 1 418 2.19e-55 191
Msa0657860 AT5G36130.1 58.696 138 56 1 339 475 1 138 2.38e-55 181
Msa0657860 AT2G42850.2 32.692 364 233 7 21 380 33 388 5.67e-55 189
Msa0657860 AT1G73340.1 28.243 478 309 10 11 473 19 477 5.49e-54 189
Msa0657860 AT1G19630.3 27.273 418 297 7 33 448 34 446 1.14e-53 187
Msa0657860 AT3G13730.2 28.095 420 288 8 35 447 52 464 3.39e-53 186
Msa0657860 AT1G05160.2 29.091 440 303 8 34 467 45 481 3.12e-52 184
Msa0657860 AT1G05160.1 29.091 440 303 8 34 467 45 481 3.12e-52 184
Msa0657860 AT5G14400.3 29.017 417 261 9 39 448 1 389 1.00e-51 180
Msa0657860 AT3G30180.1 26.490 453 306 11 8 449 3 439 3.83e-50 177
Msa0657860 AT3G50660.2 30.446 404 245 9 31 406 36 431 1.34e-48 173
Msa0657860 AT5G38970.1 25.420 476 334 11 6 475 4 464 6.53e-47 169
Msa0657860 AT5G05690.2 28.684 380 260 7 32 409 29 399 9.03e-45 162
Msa0657860 AT1G19630.2 26.649 379 272 6 34 410 35 409 2.61e-44 161
Msa0657860 AT3G44970.1 29.039 458 290 13 34 474 35 474 1.24e-43 160
Msa0657860 AT1G78490.1 29.318 440 275 15 34 455 35 456 8.76e-43 158
Msa0657860 AT5G14400.1 27.621 391 248 9 95 478 2 364 1.06e-42 155
Msa0657860 AT1G55940.2 26.512 430 298 12 34 451 45 468 1.43e-40 152
Msa0657860 AT1G55940.1 26.824 425 293 12 34 446 45 463 2.47e-40 151
Msa0657860 AT4G15300.2 27.103 428 284 13 34 450 35 445 3.76e-40 150
Msa0657860 AT4G15300.3 26.291 426 290 11 34 450 25 435 4.15e-40 150
Msa0657860 AT5G05690.3 27.966 354 236 9 125 471 3 344 4.32e-40 148
Msa0657860 AT1G12740.3 26.331 338 241 6 34 369 31 362 1.30e-38 144
Msa0657860 AT5G38970.2 24.548 387 279 8 93 475 6 383 4.48e-38 143
Msa0657860 AT5G38970.4 24.548 387 279 8 93 475 6 383 4.48e-38 143
Msa0657860 AT4G15393.2 26.932 427 285 14 34 450 35 444 1.08e-37 144
Msa0657860 AT4G15396.1 25.527 427 293 11 34 450 35 446 1.48e-37 144
Msa0657860 AT4G15300.1 26.018 442 293 13 34 450 25 457 4.35e-37 142
Msa0657860 AT5G14400.4 28.994 338 223 8 39 369 1 328 1.37e-36 138
Msa0657860 AT1G65670.1 24.779 452 305 12 34 473 35 463 3.51e-36 140
Msa0657860 AT4G15396.3 25.416 421 290 10 34 444 35 441 4.41e-36 139
Msa0657860 AT4G36380.2 27.679 336 237 5 34 366 69 401 6.24e-36 138
Msa0657860 AT5G48000.2 25.926 459 307 12 34 476 35 476 1.87e-35 138
Msa0657860 AT5G48000.4 25.926 459 307 12 34 476 35 476 1.87e-35 138
Msa0657860 AT5G48000.7 25.926 459 307 12 34 476 35 476 1.87e-35 138
Msa0657860 AT5G48000.6 25.926 459 307 12 34 476 35 476 1.87e-35 138
Msa0657860 AT5G48000.5 25.926 459 307 12 34 476 35 476 1.87e-35 138
Msa0657860 AT5G48000.3 25.926 459 307 12 34 476 35 476 1.87e-35 138
Msa0657860 AT5G48000.1 26.144 459 306 12 34 476 76 517 5.66e-35 137
Msa0657860 AT5G38970.3 24.691 405 286 9 6 405 4 394 5.82e-35 135
Msa0657860 AT4G15310.1 25.439 456 316 13 6 450 6 448 9.14e-32 127
Msa0657860 AT1G78490.2 29.049 389 242 14 34 406 35 405 3.00e-31 125
Msa0657860 AT4G15396.2 24.764 424 279 12 34 450 35 425 1.69e-30 123
Msa0657860 AT3G30290.1 24.485 388 268 11 73 450 3 375 2.18e-28 117
Msa0657860 AT4G15393.1 26.053 380 258 12 34 406 35 398 4.46e-25 107
Msa0657860 AT2G29090.4 24.567 289 205 6 28 314 43 320 7.12e-25 105
Msa0657860 AT4G15396.4 24.474 380 266 9 34 406 35 400 1.56e-24 105
Msa0657860 AT2G34490.1 25.600 375 255 12 119 474 121 490 4.96e-22 99.4
Msa0657860 AT4G37320.1 33.654 208 131 4 247 451 257 460 7.75e-22 98.6
Msa0657860 AT1G31800.1 30.526 190 122 3 268 451 357 542 2.06e-21 97.8
Msa0657860 AT3G28740.1 32.547 212 134 4 258 468 278 481 6.46e-21 95.9
Msa0657860 AT1G11680.1 22.869 481 329 13 4 463 12 471 8.91e-21 95.5
Msa0657860 AT2G46960.1 29.496 278 170 10 215 475 132 400 1.29e-20 94.4
Msa0657860 AT2G46960.2 29.496 278 170 10 215 475 248 516 2.85e-20 94.0
Msa0657860 AT4G15393.3 23.077 377 240 9 34 406 35 365 5.57e-20 91.7
Msa0657860 AT5G52400.1 28.626 262 166 10 224 475 268 518 1.01e-19 92.4
Msa0657860 AT4G37330.1 24.744 489 304 18 1 454 1 460 3.91e-19 90.5
Msa0657860 AT1G66540.2 30.374 214 139 5 247 455 84 292 1.16e-18 87.4
Msa0657860 AT4G37400.1 28.750 240 155 5 219 451 231 461 1.57e-18 88.6
Msa0657860 AT1G66540.1 30.374 214 139 5 247 455 143 351 1.68e-18 87.8
Msa0657860 AT3G53130.1 26.190 252 159 7 221 455 275 516 1.89e-18 88.6
Msa0657860 AT3G56630.1 30.288 208 129 6 250 446 264 466 2.29e-18 88.2
Msa0657860 AT3G44970.2 27.160 324 204 11 34 342 35 341 2.33e-18 87.0
Msa0657860 AT3G14630.1 28.926 242 160 6 216 450 245 481 2.57e-18 88.2
Msa0657860 AT3G14630.2 28.926 242 160 6 216 450 300 536 3.72e-18 87.8
Msa0657860 AT4G37410.1 27.848 237 159 5 219 451 233 461 4.14e-18 87.4
Msa0657860 AT4G37370.1 30.097 206 137 4 247 449 256 457 5.16e-18 87.0
Msa0657860 AT2G26710.1 24.552 391 254 13 112 474 136 513 9.29e-18 86.3
Msa0657860 AT2G34500.1 22.432 370 269 9 119 474 120 485 1.06e-17 85.9
Msa0657860 AT4G37360.1 30.151 199 134 3 258 455 270 464 1.16e-17 85.9
Msa0657860 AT2G28850.1 23.418 474 318 14 28 474 31 486 1.24e-17 85.9
Msa0657860 AT3G14640.1 24.110 365 238 11 114 450 134 487 1.66e-17 85.5
Msa0657860 AT2G28860.1 23.219 379 255 12 119 474 121 486 1.82e-17 85.5
Msa0657860 AT3G14640.2 24.110 365 238 11 114 450 156 509 1.95e-17 85.5
Msa0657860 AT3G14660.1 25.479 365 231 9 114 450 134 485 2.73e-17 84.7
Msa0657860 AT5G24910.1 27.273 286 169 12 212 473 259 529 3.52e-17 84.7
Msa0657860 AT5G25120.1 31.527 203 121 7 285 475 294 490 4.17e-17 84.3
Msa0657860 AT3G14660.2 28.405 257 166 7 204 450 91 339 4.35e-17 83.2
Msa0657860 AT5G25130.1 31.527 203 121 7 285 475 294 490 5.31e-17 84.0
Msa0657860 AT5G24900.2 28.641 206 129 6 278 473 210 407 7.04e-17 82.8
Msa0657860 AT1G34540.1 27.830 212 136 7 247 446 260 466 7.45e-17 83.6
Msa0657860 AT4G37430.1 27.686 242 161 7 219 455 236 468 7.98e-17 83.2
Msa0657860 AT2G45510.1 26.360 239 163 4 238 463 255 493 8.63e-17 83.2
Msa0657860 AT1G64930.1 31.443 194 122 5 266 451 290 480 9.03e-17 83.2
Msa0657860 AT2G46950.1 27.536 276 174 9 217 475 303 569 9.57e-17 83.2
Msa0657860 AT5G57220.1 29.469 207 140 4 247 451 253 455 1.09e-16 82.8
Msa0657860 AT4G37310.1 29.167 216 136 6 247 449 259 470 1.66e-16 82.4
Msa0657860 AT1G64940.1 30.603 232 144 8 232 451 254 480 1.72e-16 82.4
Msa0657860 AT5G24900.1 28.641 206 129 6 278 473 327 524 1.80e-16 82.4
Msa0657860 AT3G14690.2 23.990 421 275 16 63 450 112 520 1.83e-16 82.4
Msa0657860 AT3G14690.1 23.990 421 275 16 63 450 77 485 1.92e-16 82.4
Msa0657860 AT4G13290.1 28.125 288 179 10 187 460 195 468 3.07e-16 81.6
Msa0657860 AT2G44890.1 25.105 239 166 4 238 463 255 493 3.57e-16 81.3
Msa0657860 AT4G13770.1 23.983 467 320 15 12 450 8 467 3.84e-16 81.3
Msa0657860 AT1G75130.1 26.022 269 182 8 210 468 234 495 4.76e-16 80.9
Msa0657860 AT5G58860.1 27.857 280 171 11 221 475 234 507 6.65e-16 80.5
Msa0657860 AT4G13310.1 29.464 224 141 7 248 460 258 475 6.76e-16 80.5
Msa0657860 AT5G25140.1 31.068 206 124 6 282 475 291 490 8.35e-16 80.1
Msa0657860 AT3G14680.1 28.016 257 169 8 203 450 236 485 9.30e-16 80.1
Msa0657860 AT1G50520.1 27.426 237 149 6 226 448 253 480 1.61e-15 79.3
Msa0657860 AT3G14610.1 23.056 360 247 12 114 450 133 485 1.63e-15 79.3
Msa0657860 AT4G37340.1 29.187 209 141 5 249 455 261 464 2.02e-15 79.0
Msa0657860 AT5G67310.1 27.888 251 169 7 201 449 229 469 4.32e-15 78.2
Msa0657860 AT3G14620.1 27.206 272 172 11 217 471 248 510 4.45e-15 78.2
Msa0657860 AT2G25160.1 27.018 285 180 10 201 469 225 497 6.19e-15 77.4
Msa0657860 AT5G06905.1 26.122 245 155 7 236 458 247 487 7.49e-15 77.4
Msa0657860 AT5G36220.2 27.692 195 136 3 258 451 130 320 3.30e-14 74.3
Msa0657860 AT5G36220.1 27.692 195 136 3 258 451 276 466 5.66e-14 74.3
Msa0657860 AT5G25180.1 29.612 206 127 6 282 475 291 490 6.54e-14 74.3
Msa0657860 AT3G26230.1 31.217 189 117 6 278 460 294 475 6.81e-14 74.3
Msa0657860 AT3G20935.1 27.477 222 143 5 238 450 93 305 7.66e-14 73.2
Msa0657860 AT4G15110.1 25.806 217 124 5 267 450 338 550 7.73e-14 74.3
Msa0657860 AT3G20140.1 29.825 171 112 3 285 450 308 475 8.30e-14 73.9
Msa0657860 AT3G32047.1 28.333 240 150 6 232 455 252 485 1.02e-13 73.6
Msa0657860 AT3G61040.1 28.261 230 149 5 233 449 237 463 1.12e-13 73.6
Msa0657860 AT1G11600.1 21.684 475 296 18 32 454 33 483 1.44e-13 73.2
Msa0657860 AT3G26300.1 30.233 172 110 4 285 450 298 465 1.88e-13 72.8
Msa0657860 AT2G12190.1 29.870 231 145 7 233 451 256 481 2.31e-13 72.8
Msa0657860 AT2G45550.1 27.500 200 137 3 256 450 279 475 2.65e-13 72.4
Msa0657860 AT3G14650.1 27.197 239 161 6 220 450 252 485 2.80e-13 72.4
Msa0657860 AT2G23220.1 25.962 208 147 4 247 451 272 475 5.10e-13 71.6
Msa0657860 AT5G38450.1 26.570 207 134 7 278 475 318 515 5.32e-13 71.6
Msa0657860 AT3G20120.2 28.000 175 114 3 285 450 171 342 6.42e-13 70.5
Msa0657860 AT3G20120.3 28.000 175 114 3 285 450 171 342 6.42e-13 70.5
Msa0657860 AT3G20120.1 28.000 175 114 3 285 450 171 342 6.42e-13 70.5
Msa0657860 AT1G67110.1 25.362 276 179 8 217 475 244 509 7.41e-13 70.9
Msa0657860 AT3G20120.4 28.000 175 114 3 285 450 307 478 7.51e-13 70.9
Msa0657860 AT4G12330.1 25.352 213 148 6 242 448 272 479 1.18e-12 70.5
Msa0657860 AT1G64950.1 25.105 474 277 22 32 451 30 479 1.37e-12 70.1
Msa0657860 AT2G26170.2 27.574 272 168 11 218 472 175 434 1.48e-12 69.7
Msa0657860 AT1G33730.1 27.751 209 142 4 247 450 135 339 1.65e-12 69.3
Msa0657860 AT1G33730.2 27.751 209 142 4 247 450 135 339 1.65e-12 69.3
Msa0657860 AT2G26170.1 27.574 272 168 11 218 472 258 517 1.66e-12 70.1
Msa0657860 AT5G23190.1 24.696 247 167 6 221 451 271 514 1.71e-12 70.1
Msa0657860 AT2G23190.1 26.068 234 162 6 220 451 280 504 1.83e-12 69.7
Msa0657860 AT3G48280.1 29.958 237 147 8 230 455 231 459 2.50e-12 69.3
Msa0657860 AT1G50560.1 26.699 206 137 4 256 450 281 483 2.61e-12 69.3
Msa0657860 AT5G04330.1 25.547 274 173 10 198 454 215 474 5.74e-12 68.2
Msa0657860 AT3G20110.1 29.775 178 118 4 285 460 305 477 6.77e-12 68.2
Msa0657860 AT4G36220.1 25.000 212 140 4 248 454 288 485 7.73e-12 67.8
Msa0657860 AT3G26180.2 26.721 247 156 7 247 475 125 364 9.92e-12 67.0
Msa0657860 AT3G26180.1 26.721 247 156 7 247 475 259 498 1.15e-11 67.4
Msa0657860 AT1G13150.1 20.930 473 309 16 31 451 32 491 1.21e-11 67.4
Msa0657860 AT4G15350.1 28.000 175 114 4 285 450 302 473 1.76e-11 66.6
Msa0657860 AT2G45580.2 27.523 218 136 7 249 453 120 328 2.11e-11 65.9
Msa0657860 AT1G13140.1 26.437 174 116 4 285 446 320 493 2.91e-11 66.2
Msa0657860 AT1G13140.2 26.437 174 116 4 285 446 294 467 2.99e-11 65.9
Msa0657860 AT2G27010.1 26.857 175 116 3 285 450 284 455 3.23e-11 65.9
Msa0657860 AT2G45580.1 27.523 218 136 7 249 453 274 482 4.70e-11 65.5
Msa0657860 AT3G26290.2 27.536 207 136 5 282 478 308 510 5.02e-11 65.5
Msa0657860 AT1G74540.1 27.528 178 121 4 285 457 289 463 5.05e-11 65.1
Msa0657860 AT3G26290.1 27.536 207 136 5 282 478 295 497 5.22e-11 65.1
Msa0657860 AT3G20950.1 28.000 175 114 3 285 450 312 483 5.41e-11 65.1
Msa0657860 AT3G48520.1 24.268 239 155 7 223 447 243 469 7.84e-11 64.7
Msa0657860 AT1G69500.1 23.588 301 169 9 224 474 232 521 8.45e-11 64.7

Find 116 sgRNAs with CRISPR-Local

Find 189 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTACCATGTTATGTATAA+TGG 0.176941 4_3:+67792897 None:intergenic
TAGAAATTACTTGCCTAATA+TGG 0.207689 4_3:-67794894 Msa0657860:CDS
TGATTGTAGTTGAAAGTTTA+AGG 0.215714 4_3:-67795443 Msa0657860:five_prime_UTR
ATGGGATTATTCTGCAGTTT+TGG 0.260743 4_3:+67792556 None:intergenic
CTTTCCAATGTGTGTTTATA+TGG 0.264138 4_3:+67794855 None:intergenic
AAGTAATTTCTAAGTGTTTC+TGG 0.266492 4_3:+67794905 None:intergenic
TTATTATTCATCATAGCTTA+TGG 0.273742 4_3:-67795344 Msa0657860:exon
AGCATAGGTAAAATCCTTTA+TGG 0.275374 4_3:+67793385 None:intergenic
GAAGAAAAGGAAAGTGGATT+TGG 0.289451 4_3:-67793970 Msa0657860:CDS
TCCAGAAAATGAAATATTCT+TGG 0.305225 4_3:-67793466 Msa0657860:CDS
AAGGTTGTCTCTTGTTAATA+AGG 0.311020 4_3:-67794978 Msa0657860:CDS
CCAAATGGAACATATGAATA+AGG 0.317996 4_3:+67793091 None:intergenic
GGAAATCCTAAGGTTCCTTT+AGG 0.319592 4_3:+67795223 None:intergenic
GCCTTATGAAACCTTGTTCC+AGG 0.328634 4_3:+67794038 None:intergenic
ACCTTAGGATTTCCATTTGT+TGG 0.331369 4_3:-67795214 Msa0657860:CDS
ATTACCATGTTATGTATAAT+GGG 0.338106 4_3:+67792898 None:intergenic
CCTATGCTAGAGCCTGAAAA+TGG 0.340307 4_3:-67792944 Msa0657860:CDS
TAACAAGTAAATGAGATAAA+AGG 0.344077 4_3:+67793919 None:intergenic
CCTTATTCATATGTTCCATT+TGG 0.347733 4_3:-67793091 Msa0657860:CDS
TCTTGCCCCAAACACATTCT+AGG 0.349577 4_3:+67793061 None:intergenic
AGGAGGACCTAGAATGTGTT+TGG 0.349634 4_3:-67793068 Msa0657860:CDS
TGAAAGCTACAAATGAAATA+AGG 0.357447 4_3:-67794013 Msa0657860:CDS
GGCTTCGCAATCAACTTTCC+TGG 0.366680 4_3:-67794056 Msa0657860:CDS
AATATAGTATTAAAATGTTA+AGG 0.368672 4_3:-67792838 Msa0657860:three_prime_UTR
AATTGCAAGGAGGATTTGTT+AGG 0.369231 4_3:+67795420 None:intergenic
AATGTGTATAGCTGTATTAT+AGG 0.370831 4_3:+67794173 None:intergenic
ATCTTGAGGGAAAGCAAATA+AGG 0.372882 4_3:-67795165 Msa0657860:CDS
TCATTGATTATGAAGTATCT+TGG 0.378005 4_3:-67793798 Msa0657860:CDS
CGCTTTCAGAGATGCCATAA+AGG 0.396578 4_3:-67793399 Msa0657860:CDS
GAATTTCTAAAAGGGATCAT+TGG 0.400489 4_3:-67794077 Msa0657860:CDS
TGAGCAATTCTATCCATATT+AGG 0.400802 4_3:+67794881 None:intergenic
GGAGGACCTAGAATGTGTTT+GGG 0.409965 4_3:-67793067 Msa0657860:CDS
TCAAAGGTTTCTCCAACAAA+TGG 0.410321 4_3:+67795202 None:intergenic
AAAACAAGAATGTTCAAGTA+TGG 0.410480 4_3:-67795027 Msa0657860:CDS
TCCTGGAACAAGGTTTCATA+AGG 0.411433 4_3:-67794039 Msa0657860:CDS
AATCTTCCTAAAGGAACCTT+AGG 0.418148 4_3:-67795229 Msa0657860:CDS
TGGGAAGGTTGAAGTTGGAT+TGG 0.420509 4_3:+67792917 None:intergenic
GAAAGGTTTGTTACATGGAT+AGG 0.427389 4_3:+67794113 None:intergenic
TATTCATATGTTCCATTTGG+AGG 0.446643 4_3:-67793088 Msa0657860:CDS
ACTCCCCTGCCTCTTTCCCT+TGG 0.450901 4_3:+67793507 None:intergenic
TTAAAATGATTATGAAGAAA+AGG 0.452233 4_3:-67793983 Msa0657860:CDS
TTTGATGCTTCAAGGTTTGA+AGG 0.459869 4_3:-67793127 Msa0657860:CDS
TATAATGGGAAGGTTGAAGT+TGG 0.466655 4_3:+67792912 None:intergenic
TCTCTGAAAGCGCCACCGAC+AGG 0.468430 4_3:+67793410 None:intergenic
TCAGGATTTGAAAACAGTGT+TGG 0.475875 4_3:+67793154 None:intergenic
CTGAGGCTGTCCCCGCCTGT+CGG 0.476524 4_3:-67793425 Msa0657860:CDS
TGAAATTAGCCAAGGGAAAG+AGG 0.480337 4_3:-67793516 Msa0657860:CDS
CAATCAACTTTCCTGGAACA+AGG 0.481445 4_3:-67794049 Msa0657860:CDS
TGAAAGCGCCACCGACAGGC+GGG 0.482966 4_3:+67793414 None:intergenic
TTGTCTCTTGTTAATAAGGT+TGG 0.485068 4_3:-67794974 Msa0657860:CDS
GCTCAGTGAAGAAGCTGTTA+AGG 0.485490 4_3:-67794997 Msa0657860:CDS
TCATACTTGAACTTCTCATC+AGG 0.487310 4_3:+67792968 None:intergenic
CAAGTTCATTCAACAAGTGT+TGG 0.487953 4_3:-67792782 Msa0657860:intron
TTTCTAAAAGCAAATCTTGA+GGG 0.493213 4_3:-67795178 Msa0657860:CDS
ACTCCTTCACATATGTGGTT+AGG 0.495089 4_3:+67795465 None:intergenic
ATGATGAAAGGTTTGTTACA+TGG 0.496002 4_3:+67794108 None:intergenic
ATTCTAGGTCCTCCTCCAAA+TGG 0.498202 4_3:+67793076 None:intergenic
ATTAGCCAAGGGAAAGAGGC+AGG 0.499684 4_3:-67793512 Msa0657860:CDS
GGTGTTTATGACAGTTGCAT+TGG 0.503191 4_3:-67793201 Msa0657860:intron
ATTCTTCAAAATATGATGAA+AGG 0.503401 4_3:+67794096 None:intergenic
GGCAGGGGAGTTATTGCAAT+GGG 0.509314 4_3:-67793495 Msa0657860:CDS
AGGCTGTCCCCGCCTGTCGG+TGG 0.509526 4_3:-67793422 Msa0657860:CDS
AAAGGTTTGTTACATGGATA+GGG 0.509674 4_3:+67794114 None:intergenic
TCCAACAAATGGAAATCCTA+AGG 0.513579 4_3:+67795213 None:intergenic
AGTGGATTTGGATGAAAAGA+AGG 0.515529 4_3:-67793958 Msa0657860:CDS
GATTATGAAGAAAAGGAAAG+TGG 0.517025 4_3:-67793976 Msa0657860:CDS
TTGTGATGAAATGCAAAAGA+AGG 0.522587 4_3:+67795275 None:intergenic
GCTTCAAGGTTTGAAGGAGA+AGG 0.523358 4_3:-67793121 Msa0657860:CDS
TAGCCAAGGGAAAGAGGCAG+GGG 0.528348 4_3:-67793510 Msa0657860:CDS
GGAACATATGAATAAGGTGT+TGG 0.529659 4_3:+67793097 None:intergenic
TCATATGTTCCATTTGGAGG+AGG 0.534499 4_3:-67793085 Msa0657860:CDS
GTTTATGAACAAGTGTTGAA+AGG 0.536878 4_3:-67793762 Msa0657860:intron
CAATCACTCCTTCACATATG+TGG 0.541508 4_3:+67795460 None:intergenic
AGAAAGCTTAATCTTCCTAA+AGG 0.544980 4_3:-67795238 Msa0657860:CDS
CCTTCCCATTATACATAACA+TGG 0.549887 4_3:-67792902 Msa0657860:exon
AACACTTGTTCATAAACTTG+AGG 0.550446 4_3:+67793768 None:intergenic
AATAAGAACTTGTTCCCAGC+TGG 0.553588 4_3:+67795058 None:intergenic
CCATGTTATGTATAATGGGA+AGG 0.554159 4_3:+67792902 None:intergenic
TTGTTGCTTATTTCTAAGCA+TGG 0.555375 4_3:-67794141 Msa0657860:CDS
CTGAAAGCGCCACCGACAGG+CGG 0.557611 4_3:+67793413 None:intergenic
CTTCAAGGTTTGAAGGAGAA+GGG 0.558408 4_3:-67793120 Msa0657860:CDS
GAAAGCGCCACCGACAGGCG+GGG 0.559653 4_3:+67793415 None:intergenic
CTTGTTACACCTGATACAAG+TGG 0.559763 4_3:-67793903 Msa0657860:CDS
ATTATAACATCCCTAGTGGA+TGG 0.567013 4_3:-67793361 Msa0657860:CDS
AACAGCTTCTTCACTGAGCT+AGG 0.574513 4_3:+67795001 None:intergenic
GAACAACTTGAAATTAGCCA+AGG 0.578712 4_3:-67793524 Msa0657860:CDS
GTTTGGGGCAAGAGTTCGCT+CGG 0.580677 4_3:-67793051 Msa0657860:CDS
TATTGTGAAACGTTTCAAGT+GGG 0.582770 4_3:-67793002 Msa0657860:CDS
ATGTTGCTTCTGAAGTTCTG+AGG 0.584534 4_3:-67793442 Msa0657860:CDS
TAACATCCCTAGTGGATGGA+AGG 0.587209 4_3:-67793357 Msa0657860:intron
GTGATGAAGCAAAAGTAACT+AGG 0.590193 4_3:-67794952 Msa0657860:CDS
ATTTCTAAAAGCAAATCTTG+AGG 0.591691 4_3:-67795179 Msa0657860:CDS
AAACATACCTTCCATCCACT+AGG 0.600198 4_3:+67793350 None:intergenic
TGAGATAAAAGGTCTTGTGT+AGG 0.601047 4_3:+67793930 None:intergenic
AGCACCATATAAACACACAT+TGG 0.601255 4_3:-67794859 Msa0657860:CDS
ACAAAGAGAGCCAAAACTGT+TGG 0.605657 4_3:+67795298 None:intergenic
ACAAGAATGTTCAAGTATGG+TGG 0.606348 4_3:-67795024 Msa0657860:CDS
AGGGATGTTATAATCAGCAT+AGG 0.611512 4_3:+67793370 None:intergenic
CATATAAACACACATTGGAA+AGG 0.612746 4_3:-67794854 Msa0657860:intron
GTACTGATCTAGAAGTGTCA+TGG 0.614010 4_3:+67793823 None:intergenic
ACTGAACACATATAATTGCA+AGG 0.616038 4_3:+67795407 None:intergenic
AACATACCTTCCATCCACTA+GGG 0.616641 4_3:+67793351 None:intergenic
ATATTGTGAAACGTTTCAAG+TGG 0.621656 4_3:-67793003 Msa0657860:CDS
TTACACCTGATACAAGTGGA+AGG 0.625910 4_3:-67793899 Msa0657860:CDS
TTATTCATCATAGCTTATGG+AGG 0.631091 4_3:-67795341 Msa0657860:exon
GAACACACATACAACACACA+TGG 0.635289 4_3:-67793179 Msa0657860:CDS
TTAGCCAAGGGAAAGAGGCA+GGG 0.642507 4_3:-67793511 Msa0657860:CDS
AACAACTTGAAATTAGCCAA+GGG 0.643857 4_3:-67793523 Msa0657860:CDS
AGGCAGGGGAGTTATTGCAA+TGG 0.650161 4_3:-67793496 Msa0657860:CDS
GTACCTAACCACATATGTGA+AGG 0.653382 4_3:-67795468 Msa0657860:five_prime_UTR
GCTGATTATAACATCCCTAG+TGG 0.655417 4_3:-67793365 Msa0657860:CDS
ATGAAGCAAAAGTAACTAGG+AGG 0.673193 4_3:-67794949 Msa0657860:CDS
AGGGGAGTTATTGCAATGGG+AGG 0.678989 4_3:-67793492 Msa0657860:CDS
GATAACGTTCTTCATCATCG+AGG 0.692178 4_3:-67792753 Msa0657860:three_prime_UTR
GAGGACCTAGAATGTGTTTG+GGG 0.695156 4_3:-67793066 Msa0657860:CDS
GAACACATATAATTGCAAGG+AGG 0.765052 4_3:+67795410 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCAGATATTTTTTATTTTTT+TGG - chr4_3:67792674-67792693 Msa0657860:intron 10.0%
!!! CAGATATTTTTTATTTTTTT+GGG - chr4_3:67792675-67792694 Msa0657860:intron 10.0%
!! TTTGATTAAATTTATGAAAA+TGG - chr4_3:67793452-67793471 Msa0657860:CDS 10.0%
!! AATATAGTATTAAAATGTTA+AGG - chr4_3:67795352-67795371 Msa0657860:five_prime_UTR 10.0%
!!! TATTTTGAAGAATTTCTAAA+AGG - chr4_3:67794104-67794123 Msa0657860:CDS 15.0%
!!! ATTTTGAAGAATTTCTAAAA+GGG - chr4_3:67794105-67794124 Msa0657860:CDS 15.0%
!! TTAAAATGATTATGAAGAAA+AGG - chr4_3:67794207-67794226 Msa0657860:intron 15.0%
!! TTTGAACATTAATTTCAATA+TGG - chr4_3:67794465-67794484 Msa0657860:intron 15.0%
!!! CTTTGATTTGATAGTAAAAA+AGG + chr4_3:67792585-67792604 None:intergenic 20.0%
!! TTATTATTCATCATAGCTTA+TGG - chr4_3:67792846-67792865 Msa0657860:three_prime_UTR 20.0%
!!! ATTTGCTTTTAGAAATTCAA+AGG + chr4_3:67793007-67793026 None:intergenic 20.0%
!!! CTGTTTTATTAGCATATTAT+TGG - chr4_3:67793534-67793553 Msa0657860:intron 20.0%
!! AAATTGCAAAAAATAAGAAC+CGG + chr4_3:67793668-67793687 None:intergenic 20.0%
!!! GCTAATTAACACTTTAAAAA+TGG + chr4_3:67793781-67793800 None:intergenic 20.0%
!!! ATTTTTGACAAACATCTATA+TGG + chr4_3:67793921-67793940 None:intergenic 20.0%
!!! TGTTAATTTACACTTTTGAA+GGG - chr4_3:67793973-67793992 Msa0657860:CDS 20.0%
!! ATTCTTCAAAATATGATGAA+AGG + chr4_3:67794097-67794116 None:intergenic 20.0%
!! TAACAAGTAAATGAGATAAA+AGG + chr4_3:67794274-67794293 None:intergenic 20.0%
!!! CTTTTATGAAAAACTTGATT+AGG - chr4_3:67794608-67794627 Msa0657860:intron 20.0%
!! ATTACCATGTTATGTATAAT+GGG + chr4_3:67795295-67795314 None:intergenic 20.0%
!! TATTACCATGTTATGTATAA+TGG + chr4_3:67795296-67795315 None:intergenic 20.0%
!! TACAAATGAATAACCAAAAA+TGG - chr4_3:67795607-67795626 Msa0657860:five_prime_UTR 20.0%
! TGATTGTAGTTGAAAGTTTA+AGG - chr4_3:67792747-67792766 Msa0657860:three_prime_UTR 25.0%
!!! AATAACTAGAGCTTTGTTTT+TGG + chr4_3:67792827-67792846 None:intergenic 25.0%
!! ATTTCTAAAAGCAAATCTTG+AGG - chr4_3:67793011-67793030 Msa0657860:CDS 25.0%
!! TTTCTAAAAGCAAATCTTGA+GGG - chr4_3:67793012-67793031 Msa0657860:CDS 25.0%
! AAAACAAGAATGTTCAAGTA+TGG - chr4_3:67793163-67793182 Msa0657860:CDS 25.0%
! AAGTAATTTCTAAGTGTTTC+TGG + chr4_3:67793288-67793307 None:intergenic 25.0%
! TAGAAATTACTTGCCTAATA+TGG - chr4_3:67793296-67793315 Msa0657860:intron 25.0%
! AAAAACATGCTAGAATCATA+TGG + chr4_3:67793701-67793720 None:intergenic 25.0%
!! TAAAGTTCGACTTTCTTTTA+GGG + chr4_3:67793872-67793891 None:intergenic 25.0%
!! ATAAAGTTCGACTTTCTTTT+AGG + chr4_3:67793873-67793892 None:intergenic 25.0%
! GAACTTTATTACACATTCAT+CGG - chr4_3:67793884-67793903 Msa0657860:CDS 25.0%
!! GTGTTAATTTACACTTTTGA+AGG - chr4_3:67793972-67793991 Msa0657860:CDS 25.0%
! AATGTGTATAGCTGTATTAT+AGG + chr4_3:67794020-67794039 None:intergenic 25.0%
! TGAAAGCTACAAATGAAATA+AGG - chr4_3:67794177-67794196 Msa0657860:CDS 25.0%
!! ATATTACTACTTCTTTTTGC+TGG - chr4_3:67794344-67794363 Msa0657860:intron 25.0%
!! TCATTGATTATGAAGTATCT+TGG - chr4_3:67794392-67794411 Msa0657860:intron 25.0%
! GTATAAGAAAAAAAGCAACA+TGG + chr4_3:67794589-67794608 None:intergenic 25.0%
! TCCAGAAAATGAAATATTCT+TGG - chr4_3:67794724-67794743 Msa0657860:intron 25.0%
!! TCCAAGAATATTTCATTTTC+TGG + chr4_3:67794728-67794747 None:intergenic 25.0%
!!! TATTCTAAAGCATGTATGTA+TGG - chr4_3:67794968-67794987 Msa0657860:CDS 25.0%
! CTCTTAGATTACTAAATTAC+TGG - chr4_3:67795494-67795513 Msa0657860:five_prime_UTR 25.0%
ACTGAACACATATAATTGCA+AGG + chr4_3:67792786-67792805 None:intergenic 30.0%
!!! TAGAGCTTTGTTTTTGGAAT+TGG + chr4_3:67792821-67792840 None:intergenic 30.0%
TTATTCATCATAGCTTATGG+AGG - chr4_3:67792849-67792868 Msa0657860:three_prime_UTR 30.0%
!! CATAGTTTTACCAACAGTTT+TGG - chr4_3:67792882-67792901 Msa0657860:three_prime_UTR 30.0%
TTGTGATGAAATGCAAAAGA+AGG + chr4_3:67792918-67792937 None:intergenic 30.0%
AGAAAGCTTAATCTTCCTAA+AGG - chr4_3:67792952-67792971 Msa0657860:CDS 30.0%
!! GTTTTCAAGACTTCAATGTT+TGG - chr4_3:67793084-67793103 Msa0657860:CDS 30.0%
AAGGTTGTCTCTTGTTAATA+AGG - chr4_3:67793212-67793231 Msa0657860:intron 30.0%
TTGTCTCTTGTTAATAAGGT+TGG - chr4_3:67793216-67793235 Msa0657860:intron 30.0%
TGAGCAATTCTATCCATATT+AGG + chr4_3:67793312-67793331 None:intergenic 30.0%
CTTTCCAATGTGTGTTTATA+TGG + chr4_3:67793338-67793357 None:intergenic 30.0%
CATATAAACACACATTGGAA+AGG - chr4_3:67793336-67793355 Msa0657860:intron 30.0%
CTATCATGAAATGAAATGCA+AGG + chr4_3:67793409-67793428 None:intergenic 30.0%
! AAATTTTCCTCAACAACAAC+TGG + chr4_3:67793479-67793498 None:intergenic 30.0%
AAAATAAGAACCGGTTGAAT+TGG + chr4_3:67793659-67793678 None:intergenic 30.0%
!! AATTTACACTTTTGAAGGGA+AGG - chr4_3:67793977-67793996 Msa0657860:CDS 30.0%
!! TTGTTGCTTATTTCTAAGCA+TGG - chr4_3:67794049-67794068 Msa0657860:CDS 30.0%
!! AAAGGTTTGTTACATGGATA+GGG + chr4_3:67794079-67794098 None:intergenic 30.0%
!! ATGATGAAAGGTTTGTTACA+TGG + chr4_3:67794085-67794104 None:intergenic 30.0%
! GAATTTCTAAAAGGGATCAT+TGG - chr4_3:67794113-67794132 Msa0657860:CDS 30.0%
GATTATGAAGAAAAGGAAAG+TGG - chr4_3:67794214-67794233 Msa0657860:intron 30.0%
AACACTTGTTCATAAACTTG+AGG + chr4_3:67794425-67794444 None:intergenic 30.0%
!! GTTTATGAACAAGTGTTGAA+AGG - chr4_3:67794428-67794447 Msa0657860:intron 30.0%
AACAACTTGAAATTAGCCAA+GGG - chr4_3:67794667-67794686 Msa0657860:intron 30.0%
AGCATAGGTAAAATCCTTTA+TGG + chr4_3:67794808-67794827 None:intergenic 30.0%
!! CTTGAAGCATCAAATTTTTC+AGG + chr4_3:67795057-67795076 None:intergenic 30.0%
CTGAAAAATTTGATGCTTCA+AGG - chr4_3:67795055-67795074 Msa0657860:CDS 30.0%
CCAAATGGAACATATGAATA+AGG + chr4_3:67795102-67795121 None:intergenic 30.0%
CCTTATTCATATGTTCCATT+TGG - chr4_3:67795099-67795118 Msa0657860:CDS 30.0%
TATTCATATGTTCCATTTGG+AGG - chr4_3:67795102-67795121 Msa0657860:CDS 30.0%
ATATTGTGAAACGTTTCAAG+TGG - chr4_3:67795187-67795206 Msa0657860:CDS 30.0%
! TATTGTGAAACGTTTCAAGT+GGG - chr4_3:67795188-67795207 Msa0657860:CDS 30.0%
! TCTAAAACTGAGTTTGTGTA+CGG - chr4_3:67795522-67795541 Msa0657860:five_prime_UTR 30.0%
! AATTGCAAGGAGGATTTGTT+AGG + chr4_3:67792773-67792792 None:intergenic 35.0%
GAACACATATAATTGCAAGG+AGG + chr4_3:67792783-67792802 None:intergenic 35.0%
AATCTTCCTAAAGGAACCTT+AGG - chr4_3:67792961-67792980 Msa0657860:CDS 35.0%
ACCTTAGGATTTCCATTTGT+TGG - chr4_3:67792976-67792995 Msa0657860:CDS 35.0%
TCCAACAAATGGAAATCCTA+AGG + chr4_3:67792980-67792999 None:intergenic 35.0%
TCAAAGGTTTCTCCAACAAA+TGG + chr4_3:67792991-67793010 None:intergenic 35.0%
ATCTTGAGGGAAAGCAAATA+AGG - chr4_3:67793025-67793044 Msa0657860:CDS 35.0%
! GAGAATATTGCTGTGTTTTG+TGG - chr4_3:67793108-67793127 Msa0657860:CDS 35.0%
ACAAGAATGTTCAAGTATGG+TGG - chr4_3:67793166-67793185 Msa0657860:CDS 35.0%
GTGATGAAGCAAAAGTAACT+AGG - chr4_3:67793238-67793257 Msa0657860:intron 35.0%
ATGAAGCAAAAGTAACTAGG+AGG - chr4_3:67793241-67793260 Msa0657860:intron 35.0%
AGCACCATATAAACACACAT+TGG - chr4_3:67793331-67793350 Msa0657860:intron 35.0%
ATCAATCAGTTCCTATGTGT+AGG - chr4_3:67793373-67793392 Msa0657860:CDS 35.0%
CTCTCTCTAACATGATTGAA+AGG + chr4_3:67793509-67793528 None:intergenic 35.0%
CATTTAAGTCACGGTTCAAT+TGG + chr4_3:67793736-67793755 None:intergenic 35.0%
CCGTTTAGACATTTAAGTCA+CGG + chr4_3:67793745-67793764 None:intergenic 35.0%
CCGTGACTTAAATGTCTAAA+CGG - chr4_3:67793742-67793761 Msa0657860:intron 35.0%
TAATTAGCAGATAGCGAGAT+AGG - chr4_3:67793793-67793812 Msa0657860:CDS 35.0%
!! GAAAGGTTTGTTACATGGAT+AGG + chr4_3:67794080-67794099 None:intergenic 35.0%
! GAAGAAAAGGAAAGTGGATT+TGG - chr4_3:67794220-67794239 Msa0657860:intron 35.0%
! AGTGGATTTGGATGAAAAGA+AGG - chr4_3:67794232-67794251 Msa0657860:intron 35.0%
! TGAGATAAAAGGTCTTGTGT+AGG + chr4_3:67794263-67794282 None:intergenic 35.0%
AAAAACCTTCCACTTGTATC+AGG + chr4_3:67794299-67794318 None:intergenic 35.0%
! TGGAAGGTTTTTGAATGAAG+TGG - chr4_3:67794307-67794326 Msa0657860:intron 35.0%
GAACAACTTGAAATTAGCCA+AGG - chr4_3:67794666-67794685 Msa0657860:intron 35.0%
AGGGATGTTATAATCAGCAT+AGG + chr4_3:67794823-67794842 None:intergenic 35.0%
ATTATAACATCCCTAGTGGA+TGG - chr4_3:67794829-67794848 Msa0657860:intron 35.0%
TCAGGATTTGAAAACAGTGT+TGG + chr4_3:67795039-67795058 None:intergenic 35.0%
TTTGATGCTTCAAGGTTTGA+AGG - chr4_3:67795063-67795082 Msa0657860:CDS 35.0%
GGAACATATGAATAAGGTGT+TGG + chr4_3:67795096-67795115 None:intergenic 35.0%
TCATACTTGAACTTCTCATC+AGG + chr4_3:67795225-67795244 None:intergenic 35.0%
! TATAATGGGAAGGTTGAAGT+TGG + chr4_3:67795281-67795300 None:intergenic 35.0%
! CCATGTTATGTATAATGGGA+AGG + chr4_3:67795291-67795310 None:intergenic 35.0%
CCTTCCCATTATACATAACA+TGG - chr4_3:67795288-67795307 Msa0657860:CDS 35.0%
! ACACTTGTTGAATGAACTTG+TGG + chr4_3:67795408-67795427 None:intergenic 35.0%
CAAGTTCATTCAACAAGTGT+TGG - chr4_3:67795408-67795427 Msa0657860:five_prime_UTR 35.0%
GAGAAAAAAGACTTGCAACT+TGG + chr4_3:67795477-67795496 None:intergenic 35.0%
TTGGAGAGCTTCAAAGTAAT+AGG - chr4_3:67795557-67795576 Msa0657860:five_prime_UTR 35.0%
TGGAGAGCTTCAAAGTAATA+GGG - chr4_3:67795558-67795577 Msa0657860:five_prime_UTR 35.0%
!!! CAGTTTTGGAACTCCATTTT+TGG + chr4_3:67795623-67795642 None:intergenic 35.0%
GTACCTAACCACATATGTGA+AGG - chr4_3:67792722-67792741 Msa0657860:three_prime_UTR 40.0%
ACTCCTTCACATATGTGGTT+AGG + chr4_3:67792728-67792747 None:intergenic 40.0%
CAATCACTCCTTCACATATG+TGG + chr4_3:67792733-67792752 None:intergenic 40.0%
ACAAAGAGAGCCAAAACTGT+TGG + chr4_3:67792895-67792914 None:intergenic 40.0%
GGAAATCCTAAGGTTCCTTT+AGG + chr4_3:67792970-67792989 None:intergenic 40.0%
! AATAAGAACTTGTTCCCAGC+TGG + chr4_3:67793135-67793154 None:intergenic 40.0%
! AAATGGTCCAGTTGTTGTTG+AGG - chr4_3:67793469-67793488 Msa0657860:CDS 40.0%
!! TGATTTCGAGTTGAATTGGC+TGG + chr4_3:67793587-67793606 None:intergenic 40.0%
!! CAGCTGATTTCGAGTTGAAT+TGG + chr4_3:67793591-67793610 None:intergenic 40.0%
CAATTCAACTCGAAATCAGC+TGG - chr4_3:67793589-67793608 Msa0657860:intron 40.0%
!! TTCGCTTGTTGGTTTGATTC+TGG - chr4_3:67793612-67793631 Msa0657860:intron 40.0%
! GATTCTGGCTATACTTTAGC+CGG - chr4_3:67793627-67793646 Msa0657860:intron 40.0%
! ATTCTGGCTATACTTTAGCC+GGG - chr4_3:67793628-67793647 Msa0657860:intron 40.0%
CAATCAACTTTCCTGGAACA+AGG - chr4_3:67794141-67794160 Msa0657860:CDS 40.0%
TCCTGGAACAAGGTTTCATA+AGG - chr4_3:67794151-67794170 Msa0657860:CDS 40.0%
CTTGTTACACCTGATACAAG+TGG - chr4_3:67794287-67794306 Msa0657860:intron 40.0%
TTACACCTGATACAAGTGGA+AGG - chr4_3:67794291-67794310 Msa0657860:intron 40.0%
!! GTACTGATCTAGAAGTGTCA+TGG + chr4_3:67794370-67794389 None:intergenic 40.0%
TGAAATTAGCCAAGGGAAAG+AGG - chr4_3:67794674-67794693 Msa0657860:intron 40.0%
!! ATGTTGCTTCTGAAGTTCTG+AGG - chr4_3:67794748-67794767 Msa0657860:intron 40.0%
GCTGATTATAACATCCCTAG+TGG - chr4_3:67794825-67794844 Msa0657860:intron 40.0%
AACATACCTTCCATCCACTA+GGG + chr4_3:67794842-67794861 None:intergenic 40.0%
AAACATACCTTCCATCCACT+AGG + chr4_3:67794843-67794862 None:intergenic 40.0%
GGTGTTTATGACAGTTGCAT+TGG - chr4_3:67794989-67795008 Msa0657860:CDS 40.0%
GAACACACATACAACACACA+TGG - chr4_3:67795011-67795030 Msa0657860:CDS 40.0%
CTTCAAGGTTTGAAGGAGAA+GGG - chr4_3:67795070-67795089 Msa0657860:CDS 40.0%
TCATATGTTCCATTTGGAGG+AGG - chr4_3:67795105-67795124 Msa0657860:CDS 40.0%
!! TGGATTGGAAGTCCATTTTC+AGG + chr4_3:67795261-67795280 None:intergenic 40.0%
GATAACGTTCTTCATCATCG+AGG - chr4_3:67795437-67795456 Msa0657860:five_prime_UTR 40.0%
AACAGCTTCTTCACTGAGCT+AGG + chr4_3:67793192-67793211 None:intergenic 45.0%
GCTCAGTGAAGAAGCTGTTA+AGG - chr4_3:67793193-67793212 Msa0657860:intron 45.0%
CAGTTCCTATGTGTAGGACA+AGG - chr4_3:67793379-67793398 Msa0657860:CDS 45.0%
GAACACCTTGTCCTACACAT+AGG + chr4_3:67793387-67793406 None:intergenic 45.0%
!! AAATCAGCTGGTTCGCTTGT+TGG - chr4_3:67793601-67793620 Msa0657860:intron 45.0%
GCCTTATGAAACCTTGTTCC+AGG + chr4_3:67794155-67794174 None:intergenic 45.0%
!! AAAACAGTGCAGCTGACTTG+AGG + chr4_3:67794496-67794515 None:intergenic 45.0%
TACTTGAGGTCGGAACACAA+GGG - chr4_3:67794532-67794551 Msa0657860:intron 45.0%
CGCTTTCAGAGATGCCATAA+AGG - chr4_3:67794791-67794810 Msa0657860:intron 45.0%
! TAACATCCCTAGTGGATGGA+AGG - chr4_3:67794833-67794852 Msa0657860:intron 45.0%
GCTTCAAGGTTTGAAGGAGA+AGG - chr4_3:67795069-67795088 Msa0657860:CDS 45.0%
ATTCTAGGTCCTCCTCCAAA+TGG + chr4_3:67795117-67795136 None:intergenic 45.0%
AGGAGGACCTAGAATGTGTT+TGG - chr4_3:67795122-67795141 Msa0657860:CDS 45.0%
GGAGGACCTAGAATGTGTTT+GGG - chr4_3:67795123-67795142 Msa0657860:CDS 45.0%
GAGGACCTAGAATGTGTTTG+GGG - chr4_3:67795124-67795143 Msa0657860:CDS 45.0%
TCTTGCCCCAAACACATTCT+AGG + chr4_3:67795132-67795151 None:intergenic 45.0%
!! CCATTTTCAGGCTCTAGCAT+AGG + chr4_3:67795249-67795268 None:intergenic 45.0%
CCTATGCTAGAGCCTGAAAA+TGG - chr4_3:67795246-67795265 Msa0657860:CDS 45.0%
TGGGAAGGTTGAAGTTGGAT+TGG + chr4_3:67795276-67795295 None:intergenic 45.0%
GTTTGTGTACGGTTATGCAG+AGG - chr4_3:67795533-67795552 Msa0657860:five_prime_UTR 45.0%
TGTACGGTTATGCAGAGGTT+TGG - chr4_3:67795538-67795557 Msa0657860:five_prime_UTR 45.0%
! CTGTGTTTTGTGGACCAGCT+GGG - chr4_3:67793118-67793137 Msa0657860:CDS 50.0%
! CCGGTTGAATTGGTTCAACC+CGG + chr4_3:67793649-67793668 None:intergenic 50.0%
! CCGGGTTGAACCAATTCAAC+CGG - chr4_3:67793646-67793665 Msa0657860:intron 50.0%
GGCTTCGCAATCAACTTTCC+TGG - chr4_3:67794134-67794153 Msa0657860:CDS 50.0%
CACTGCAACGTACTTGAGGT+CGG - chr4_3:67794522-67794541 Msa0657860:intron 50.0%
GTACTTGAGGTCGGAACACA+AGG - chr4_3:67794531-67794550 Msa0657860:intron 50.0%
ATTAGCCAAGGGAAAGAGGC+AGG - chr4_3:67794678-67794697 Msa0657860:intron 50.0%
TTAGCCAAGGGAAAGAGGCA+GGG - chr4_3:67794679-67794698 Msa0657860:intron 50.0%
AGGCAGGGGAGTTATTGCAA+TGG - chr4_3:67794694-67794713 Msa0657860:intron 50.0%
GGCAGGGGAGTTATTGCAAT+GGG - chr4_3:67794695-67794714 Msa0657860:intron 50.0%
AGGGGAGTTATTGCAATGGG+AGG - chr4_3:67794698-67794717 Msa0657860:intron 50.0%
! GCTGTGTTTTGTGGACCAGC+TGG - chr4_3:67793117-67793136 Msa0657860:CDS 55.0%
!! CAGTGCAGCTGACTTGAGGT+CGG + chr4_3:67794492-67794511 None:intergenic 55.0%
CGTGCACTGCAACGTACTTG+AGG - chr4_3:67794518-67794537 Msa0657860:intron 55.0%
TAGCCAAGGGAAAGAGGCAG+GGG - chr4_3:67794680-67794699 Msa0657860:intron 55.0%
! GTTTGGGGCAAGAGTTCGCT+CGG - chr4_3:67795139-67795158 Msa0657860:CDS 55.0%
ACTCCCCTGCCTCTTTCCCT+TGG + chr4_3:67794686-67794705 None:intergenic 60.0%
!! TCTCTGAAAGCGCCACCGAC+AGG + chr4_3:67794783-67794802 None:intergenic 60.0%
!! TGAAAGCGCCACCGACAGGC+GGG + chr4_3:67794779-67794798 None:intergenic 65.0%
!! CTGAAAGCGCCACCGACAGG+CGG + chr4_3:67794780-67794799 None:intergenic 65.0%
CTGAGGCTGTCCCCGCCTGT+CGG - chr4_3:67794765-67794784 Msa0657860:intron 70.0%
!! GAAAGCGCCACCGACAGGCG+GGG + chr4_3:67794778-67794797 None:intergenic 70.0%
AGGCTGTCCCCGCCTGTCGG+TGG - chr4_3:67794768-67794787 Msa0657860:intron 75.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 67792569 67795643 67792569 ID=Msa0657860;Name=Msa0657860
chr4_3 mRNA 67792569 67795643 67792569 ID=Msa0657860-mRNA-1;Parent=Msa0657860;Name=Msa0657860-mRNA-1;_AED=0.06;_eAED=0.06;_QI=296|1|1|1|0.6|0.5|6|234|479
chr4_3 exon 67792569 67792633 67792569 ID=Msa0657860-mRNA-1:exon:19578;Parent=Msa0657860-mRNA-1
chr4_3 exon 67792708 67792800 67792708 ID=Msa0657860-mRNA-1:exon:19577;Parent=Msa0657860-mRNA-1
chr4_3 exon 67792831 67793209 67792831 ID=Msa0657860-mRNA-1:exon:19576;Parent=Msa0657860-mRNA-1
chr4_3 exon 67793358 67793545 67793358 ID=Msa0657860-mRNA-1:exon:19575;Parent=Msa0657860-mRNA-1
chr4_3 exon 67793763 67794218 67793763 ID=Msa0657860-mRNA-1:exon:19574;Parent=Msa0657860-mRNA-1
chr4_3 exon 67794855 67795643 67794855 ID=Msa0657860-mRNA-1:exon:19573;Parent=Msa0657860-mRNA-1
chr4_3 five_prime_UTR 67795348 67795643 67795348 ID=Msa0657860-mRNA-1:five_prime_utr;Parent=Msa0657860-mRNA-1
chr4_3 CDS 67794855 67795347 67794855 ID=Msa0657860-mRNA-1:cds;Parent=Msa0657860-mRNA-1
chr4_3 CDS 67793763 67794218 67793763 ID=Msa0657860-mRNA-1:cds;Parent=Msa0657860-mRNA-1
chr4_3 CDS 67793358 67793545 67793358 ID=Msa0657860-mRNA-1:cds;Parent=Msa0657860-mRNA-1
chr4_3 CDS 67792907 67793209 67792907 ID=Msa0657860-mRNA-1:cds;Parent=Msa0657860-mRNA-1
chr4_3 three_prime_UTR 67792831 67792906 67792831 ID=Msa0657860-mRNA-1:three_prime_utr;Parent=Msa0657860-mRNA-1
chr4_3 three_prime_UTR 67792708 67792800 67792708 ID=Msa0657860-mRNA-1:three_prime_utr;Parent=Msa0657860-mRNA-1
chr4_3 three_prime_UTR 67792569 67792633 67792569 ID=Msa0657860-mRNA-1:three_prime_utr;Parent=Msa0657860-mRNA-1
Gene Sequence

>Msa0657860

ATGGAGGTGACAAAGCTCATAGTTTTACCAACAGTTTTGGCTCTCTTTGTCCTTCTTTTGCATTTCATCACAAGAATTATCAAACTCAGAAAGCTTAATCTTCCTAAAGGAACCTTAGGATTTCCATTTGTTGGAGAAACCTTTGAATTTCTAAAAGCAAATCTTGAGGGAAAGCAAATAAGGTTCATACAAGAGAGAATGAAGAAATATGACTCAAAAGTTTTCAAGACTTCAATGTTTGGAGAGAATATTGCTGTGTTTTGTGGACCAGCTGGGAACAAGTTCTTATTTAGCAATGAAAACAAGAATGTTCAAGTATGGTGGCCTAGCTCAGTGAAGAAGCTGTTAAGGTTGTCTCTTGTTAATAAGGTTGGTGATGAAGCAAAAGTAACTAGGAGGTTGCTTATGAGCTTTCTTAATCCAGAAACACTTAGAAATTACTTGCCTAATATGGATAGAATTGCTCAGCACCATATAAACACACATTGGAAAGGGAAGGAGCAAGTTGTTGTCTATCCTATAATACAGCTATACACATTTGAATTAGCTTGTTGCTTATTTCTAAGCATGGAAGACCCTATCCATGTAACAAACCTTTCATCATATTTTGAAGAATTTCTAAAAGGGATCATTGGCTTCGCAATCAACTTTCCTGGAACAAGGTTTCATAAGGCAATGAAAGCTACAAATGAAATAAGGAAAGAAATTAAAATGATTATGAAGAAAAGGAAAGTGGATTTGGATGAAAAGAAGGCATCACCTACACAAGACCTTTTATCTCATTTACTTGTTACACCTGATACAAGTGGAAGGTTTTTGAATGAAGTGGAGATTATTGATAACATATTACTACTTCTTTTTGCTGGCCATGACACTTCTAGATCAGTACTATCATTGATTATGAAGTATCTTGGAAATTTGCCTCAAGTTTATGAACAAGTGTTGAAAGAACAACTTGAAATTAGCCAAGGGAAAGAGGCAGGGGAGTTATTGCAATGGGAGGATATCCAGAAAATGAAATATTCTTGGAATGTTGCTTCTGAAGTTCTGAGGCTGTCCCCGCCTGTCGGTGGCGCTTTCAGAGATGCCATAAAGGATTTTACCTATGCTGATTATAACATCCCTAGTGGATGGAAGTTGCATTGGAACACACATACAACACACATGGATCCAACACTGTTTTCAAATCCTGAAAAATTTGATGCTTCAAGGTTTGAAGGAGAAGGGCCAACACCTTATTCATATGTTCCATTTGGAGGAGGACCTAGAATGTGTTTGGGGCAAGAGTTCGCTCGGTTAGAGATACTTGTTTTTATGCATAATATTGTGAAACGTTTCAAGTGGGATTTAGTTATTCCTGATGAGAAGTTCAAGTATGATCCTATGCTAGAGCCTGAAAATGGACTTCCAATCCAACTTCAACCTTCCCATTATACATAA
Protein sequence

>Msa0657860

MEVTKLIVLPTVLALFVLLLHFITRIIKLRKLNLPKGTLGFPFVGETFEFLKANLEGKQIRFIQERMKKYDSKVFKTSMFGENIAVFCGPAGNKFLFSNENKNVQVWWPSSVKKLLRLSLVNKVGDEAKVTRRLLMSFLNPETLRNYLPNMDRIAQHHINTHWKGKEQVVVYPIIQLYTFELACCLFLSMEDPIHVTNLSSYFEEFLKGIIGFAINFPGTRFHKAMKATNEIRKEIKMIMKKRKVDLDEKKASPTQDLLSHLLVTPDTSGRFLNEVEIIDNILLLLFAGHDTSRSVLSLIMKYLGNLPQVYEQVLKEQLEISQGKEAGELLQWEDIQKMKYSWNVASEVLRLSPPVGGAFRDAIKDFTYADYNIPSGWKLHWNTHTTHMDPTLFSNPEKFDASRFEGEGPTPYSYVPFGGGPRMCLGQEFARLEILVFMHNIVKRFKWDLVIPDEKFKYDPMLEPENGLPIQLQPSHYT*