Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0131460 | XP_003591981.1 | 81.905 | 210 | 13 | 1 | 1 | 210 | 1 | 185 | 2.07e-118 | 344 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0131460 | G7I9N5 | 81.905 | 210 | 13 | 1 | 1 | 210 | 1 | 185 | 9.90e-119 | 344 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004340 | Msa0131460 | -0.807388 | 5.179807e-50 | -8.615850e-47 |
| Msa0004590 | Msa0131460 | 0.820599 | 6.298145e-53 | -8.615850e-47 |
| Msa0010150 | Msa0131460 | 0.802028 | 6.814580e-49 | -8.615850e-47 |
| Msa0012790 | Msa0131460 | 0.824137 | 9.497993e-54 | -8.615850e-47 |
| Msa0020320 | Msa0131460 | -0.802005 | 6.887664e-49 | -8.615850e-47 |
| Msa0024280 | Msa0131460 | 0.812125 | 4.962302e-51 | -8.615850e-47 |
| Msa0048950 | Msa0131460 | 0.858378 | 8.584666e-63 | -8.615850e-47 |
| Msa0059880 | Msa0131460 | 0.852655 | 4.002712e-61 | -8.615850e-47 |
| Msa0061590 | Msa0131460 | 0.816522 | 5.295530e-52 | -8.615850e-47 |
| Msa0069480 | Msa0131460 | 0.920420 | 1.309739e-87 | -8.615850e-47 |
| Msa0072030 | Msa0131460 | 0.830228 | 3.305725e-55 | -8.615850e-47 |
| Msa0072830 | Msa0131460 | -0.802074 | 6.667406e-49 | -8.615850e-47 |
| Msa0074620 | Msa0131460 | 0.802312 | 5.955074e-49 | -8.615850e-47 |
| Msa0084190 | Msa0131460 | 0.807152 | 5.812147e-50 | -8.615850e-47 |
| Msa0102920 | Msa0131460 | 0.806953 | 6.404919e-50 | -8.615850e-47 |
| Msa0114610 | Msa0131460 | 0.803537 | 3.324645e-49 | -8.615850e-47 |
| Msa0120050 | Msa0131460 | 0.830330 | 3.120054e-55 | -8.615850e-47 |
| Msa0131460 | Msa0132080 | -0.807057 | 6.086520e-50 | -8.615850e-47 |
| Msa0131460 | Msa0140270 | 0.816177 | 6.326889e-52 | -8.615850e-47 |
| Msa0131460 | Msa0143680 | 0.806048 | 9.937989e-50 | -8.615850e-47 |
| Msa0131460 | Msa0143710 | 0.806190 | 9.278644e-50 | -8.615850e-47 |
| Msa0131460 | Msa0147680 | 0.829152 | 6.039917e-55 | -8.615850e-47 |
| Msa0131460 | Msa0150910 | 0.850535 | 1.595042e-60 | -8.615850e-47 |
| Msa0131460 | Msa0152640 | 0.804675 | 1.927454e-49 | -8.615850e-47 |
| Msa0131460 | Msa0152660 | 0.819372 | 1.202167e-52 | -8.615850e-47 |
| Msa0131460 | Msa0163340 | 0.835276 | 1.843648e-56 | -8.615850e-47 |
| Msa0131460 | Msa0163960 | -0.802214 | 6.239602e-49 | -8.615850e-47 |
| Msa0131460 | Msa0177260 | 0.934476 | 3.807977e-96 | -8.615850e-47 |
| Msa0131460 | Msa0186200 | 0.800847 | 1.189319e-48 | -8.615850e-47 |
| Msa0131460 | Msa0190890 | 0.803187 | 3.929647e-49 | -8.615850e-47 |
| Msa0131460 | Msa0191100 | 0.804037 | 2.618573e-49 | -8.615850e-47 |
| Msa0131460 | Msa0196260 | 0.807611 | 4.644999e-50 | -8.615850e-47 |
| Msa0131460 | Msa0210790 | 0.812825 | 3.488565e-51 | -8.615850e-47 |
| Msa0131460 | Msa0210850 | 0.818940 | 1.507663e-52 | -8.615850e-47 |
| Msa0131460 | Msa0219210 | 0.808745 | 2.663646e-50 | -8.615850e-47 |
| Msa0131460 | Msa0220090 | 0.800058 | 1.722195e-48 | -8.615850e-47 |
| Msa0131460 | Msa0223880 | 0.809510 | 1.826405e-50 | -8.615850e-47 |
| Msa0131460 | Msa0226410 | 0.818974 | 1.481436e-52 | -8.615850e-47 |
| Msa0131460 | Msa0233210 | 0.800968 | 1.123697e-48 | -8.615850e-47 |
| Msa0131460 | Msa0235080 | 0.804766 | 1.845366e-49 | -8.615850e-47 |
| Msa0131460 | Msa0240970 | 0.807665 | 4.523072e-50 | -8.615850e-47 |
| Msa0131460 | Msa0251120 | 0.821416 | 4.085161e-53 | -8.615850e-47 |
| Msa0131460 | Msa0252880 | 0.806785 | 6.950217e-50 | -8.615850e-47 |
| Msa0131460 | Msa0252930 | 0.809036 | 2.306970e-50 | -8.615850e-47 |
| Msa0131460 | Msa0259300 | 0.803283 | 3.753298e-49 | -8.615850e-47 |
| Msa0131460 | Msa0265060 | 0.813454 | 2.538419e-51 | -8.615850e-47 |
| Msa0131460 | Msa0273360 | 0.804321 | 2.284422e-49 | -8.615850e-47 |
| Msa0131460 | Msa0274250 | 0.801137 | 1.037867e-48 | -8.615850e-47 |
| Msa0131460 | Msa0278480 | 0.822413 | 2.401143e-53 | -8.615850e-47 |
| Msa0131460 | Msa0298270 | 0.815356 | 9.642579e-52 | -8.615850e-47 |
| Msa0131460 | Msa0304550 | 0.818026 | 2.428975e-52 | -8.615850e-47 |
| Msa0131460 | Msa0311540 | 0.808934 | 2.426208e-50 | -8.615850e-47 |
| Msa0131460 | Msa0317300 | 0.802529 | 5.372327e-49 | -8.615850e-47 |
| Msa0131460 | Msa0327890 | 0.838245 | 3.223797e-57 | -8.615850e-47 |
| Msa0131460 | Msa0329650 | 0.806821 | 6.829682e-50 | -8.615850e-47 |
| Msa0131460 | Msa0336070 | 0.815385 | 9.501062e-52 | -8.615850e-47 |
| Msa0131460 | Msa0340650 | 0.810267 | 1.255175e-50 | -8.615850e-47 |
| Msa0131460 | Msa0341110 | 0.816599 | 5.090514e-52 | -8.615850e-47 |
| Msa0131460 | Msa0349910 | 0.812022 | 5.226260e-51 | -8.615850e-47 |
| Msa0131460 | Msa0349930 | 0.815923 | 7.206277e-52 | -8.615850e-47 |
| Msa0131460 | Msa0374130 | 0.840393 | 8.933890e-58 | -8.615850e-47 |
| Msa0131460 | Msa0410960 | -0.801914 | 7.192212e-49 | -8.615850e-47 |
| Msa0131460 | Msa0414480 | 0.808726 | 2.688577e-50 | -8.615850e-47 |
| Msa0131460 | Msa0425950 | 0.806694 | 7.262305e-50 | -8.615850e-47 |
| Msa0131460 | Msa0426030 | 0.810844 | 9.416018e-51 | -8.615850e-47 |
| Msa0131460 | Msa0426170 | 0.815004 | 1.154039e-51 | -8.615850e-47 |
| Msa0131460 | Msa0430460 | 0.803388 | 3.570384e-49 | -8.615850e-47 |
| Msa0131460 | Msa0444200 | 0.824301 | 8.694743e-54 | -8.615850e-47 |
| Msa0131460 | Msa0469550 | 0.829863 | 4.056960e-55 | -8.615850e-47 |
| Msa0131460 | Msa0491760 | 0.827538 | 1.480158e-54 | -8.615850e-47 |
| Msa0131460 | Msa0491770 | 0.827388 | 1.607847e-54 | -8.615850e-47 |
| Msa0131460 | Msa0503620 | -0.802273 | 6.065469e-49 | -8.615850e-47 |
| Msa0131460 | Msa0515150 | 0.812380 | 4.364163e-51 | -8.615850e-47 |
| Msa0131460 | Msa0515260 | 0.819454 | 1.151950e-52 | -8.615850e-47 |
| Msa0131460 | Msa0529360 | 0.808403 | 3.150996e-50 | -8.615850e-47 |
| Msa0131460 | Msa0530660 | 0.800557 | 1.363030e-48 | -8.615850e-47 |
| Msa0131460 | Msa0535570 | 0.820144 | 8.009699e-53 | -8.615850e-47 |
| Msa0131460 | Msa0538650 | 0.812924 | 3.319243e-51 | -8.615850e-47 |
| Msa0131460 | Msa0543740 | 0.816647 | 4.964705e-52 | -8.615850e-47 |
| Msa0131460 | Msa0549920 | 0.800111 | 1.679653e-48 | -8.615850e-47 |
| Msa0131460 | Msa0562050 | 0.803507 | 3.373040e-49 | -8.615850e-47 |
| Msa0131460 | Msa0566460 | 0.805648 | 1.205922e-49 | -8.615850e-47 |
| Msa0131460 | Msa0577050 | -0.808247 | 3.401523e-50 | -8.615850e-47 |
| Msa0131460 | Msa0580210 | 0.804457 | 2.140436e-49 | -8.615850e-47 |
| Msa0131460 | Msa0580730 | 0.805429 | 1.340628e-49 | -8.615850e-47 |
| Msa0131460 | Msa0583390 | 0.803348 | 3.638212e-49 | -8.615850e-47 |
| Msa0131460 | Msa0587180 | 0.805361 | 1.385593e-49 | -8.615850e-47 |
| Msa0131460 | Msa0587920 | 0.804251 | 2.363098e-49 | -8.615850e-47 |
| Msa0131460 | Msa0602050 | 0.812073 | 5.092979e-51 | -8.615850e-47 |
| Msa0131460 | Msa0603950 | 0.816854 | 4.460875e-52 | -8.615850e-47 |
| Msa0131460 | Msa0605400 | 0.811079 | 8.377569e-51 | -8.615850e-47 |
| Msa0131460 | Msa0605470 | 0.815457 | 9.156181e-52 | -8.615850e-47 |
| Msa0131460 | Msa0619390 | -0.804638 | 1.961960e-49 | -8.615850e-47 |
| Msa0131460 | Msa0623980 | 0.819862 | 9.295308e-53 | -8.615850e-47 |
| Msa0131460 | Msa0624050 | 0.811626 | 6.373517e-51 | -8.615850e-47 |
| Msa0131460 | Msa0624930 | 0.815120 | 1.087751e-51 | -8.615850e-47 |
| Msa0131460 | Msa0631700 | 0.813052 | 3.111188e-51 | -8.615850e-47 |
| Msa0131460 | Msa0643190 | 0.800303 | 1.535642e-48 | -8.615850e-47 |
| Msa0131460 | Msa0643840 | 0.815065 | 1.119001e-51 | -8.615850e-47 |
| Msa0131460 | Msa0645150 | 0.810956 | 8.904874e-51 | -8.615850e-47 |
| Msa0131460 | Msa0655430 | 0.824603 | 7.381236e-54 | -8.615850e-47 |
| Msa0131460 | Msa0658120 | 0.809590 | 1.755409e-50 | -8.615850e-47 |
| Msa0131460 | Msa0670360 | 0.821611 | 3.681820e-53 | -8.615850e-47 |
| Msa0131460 | Msa0671400 | 0.812993 | 3.205448e-51 | -8.615850e-47 |
| Msa0131460 | Msa0673940 | 0.816300 | 5.937524e-52 | -8.615850e-47 |
| Msa0131460 | Msa0676190 | 0.802182 | 6.334856e-49 | -8.615850e-47 |
| Msa0131460 | Msa0676200 | 0.807069 | 6.052746e-50 | -8.615850e-47 |
| Msa0131460 | Msa0678620 | 0.841787 | 3.845400e-58 | -8.615850e-47 |
| Msa0131460 | Msa0684560 | 0.800732 | 1.255577e-48 | -8.615850e-47 |
| Msa0131460 | Msa0695630 | 0.815476 | 9.065020e-52 | -8.615850e-47 |
| Msa0131460 | Msa0705520 | 0.812313 | 4.513851e-51 | -8.615850e-47 |
| Msa0131460 | Msa0711240 | 0.802828 | 4.662452e-49 | -8.615850e-47 |
| Msa0131460 | Msa0716700 | 0.826715 | 2.329398e-54 | -8.615850e-47 |
| Msa0131460 | Msa0727480 | 0.830929 | 2.225877e-55 | -8.615850e-47 |
| Msa0131460 | Msa0754750 | 0.802254 | 6.121084e-49 | -8.615850e-47 |
| Msa0131460 | Msa0761830 | 0.816591 | 5.110544e-52 | -8.615850e-47 |
| Msa0131460 | Msa0768670 | 0.822713 | 2.044889e-53 | -8.615850e-47 |
| Msa0131460 | Msa0768720 | 0.830183 | 3.390524e-55 | -8.615850e-47 |
| Msa0131460 | Msa0772420 | 0.814515 | 1.481601e-51 | -8.615850e-47 |
| Msa0131460 | Msa0777070 | 0.806579 | 7.679592e-50 | -8.615850e-47 |
| Msa0131460 | Msa0791300 | 0.822873 | 1.876626e-53 | -8.615850e-47 |
| Msa0131460 | Msa0804170 | 0.819492 | 1.129049e-52 | -8.615850e-47 |
| Msa0131460 | Msa0814160 | 0.831204 | 1.905781e-55 | -8.615850e-47 |
| Msa0131460 | Msa0814230 | 0.807653 | 4.549585e-50 | -8.615850e-47 |
| Msa0131460 | Msa0824860 | 0.800699 | 1.275106e-48 | -8.615850e-47 |
| Msa0131460 | Msa0828350 | 0.800516 | 1.389353e-48 | -8.615850e-47 |
| Msa0131460 | Msa0832750 | 0.800254 | 1.570748e-48 | -8.615850e-47 |
| Msa0131460 | Msa0854840 | 0.827919 | 1.199246e-54 | -8.615850e-47 |
| Msa0131460 | Msa0861400 | -0.801911 | 7.199784e-49 | -8.615850e-47 |
| Msa0131460 | Msa0869660 | 0.800302 | 1.536141e-48 | -8.615850e-47 |
| Msa0131460 | Msa0883640 | 0.833407 | 5.429762e-56 | -8.615850e-47 |
| Msa0131460 | Msa0893490 | 0.801452 | 8.946562e-49 | -8.615850e-47 |
| Msa0131460 | Msa0893840 | 0.816262 | 6.053390e-52 | -8.615850e-47 |
| Msa0131460 | Msa0896920 | 0.803854 | 2.858230e-49 | -8.615850e-47 |
| Msa0131460 | Msa0898830 | -0.803399 | 3.550711e-49 | -8.615850e-47 |
| Msa0131460 | Msa0902340 | 0.836036 | 1.184160e-56 | -8.615850e-47 |
| Msa0131460 | Msa0907840 | 0.801098 | 1.056818e-48 | -8.615850e-47 |
| Msa0131460 | Msa0910830 | 0.844251 | 8.486674e-59 | -8.615850e-47 |
| Msa0131460 | Msa0951150 | 0.805340 | 1.399523e-49 | -8.615850e-47 |
| Msa0131460 | Msa0960090 | 0.834648 | 2.654239e-56 | -8.615850e-47 |
| Msa0131460 | Msa0962290 | 0.806651 | 7.415711e-50 | -8.615850e-47 |
| Msa0131460 | Msa0967820 | 0.800426 | 1.449512e-48 | -8.615850e-47 |
| Msa0131460 | Msa0967900 | -0.802338 | 5.883613e-49 | -8.615850e-47 |
| Msa0131460 | Msa0985700 | 0.833672 | 4.661973e-56 | -8.615850e-47 |
| Msa0131460 | Msa0987640 | 0.805068 | 1.595460e-49 | -8.615850e-47 |
| Msa0131460 | Msa0993450 | 0.816279 | 6.003352e-52 | -8.615850e-47 |
| Msa0131460 | Msa1003110 | 0.826755 | 2.279453e-54 | -8.615850e-47 |
| Msa0131460 | Msa1006170 | 0.814343 | 1.616731e-51 | -8.615850e-47 |
| Msa0131460 | Msa1020540 | 0.813700 | 2.241460e-51 | -8.615850e-47 |
| Msa0131460 | Msa1021620 | 0.833885 | 4.123220e-56 | -8.615850e-47 |
| Msa0131460 | Msa1024350 | 0.824187 | 9.243824e-54 | -8.615850e-47 |
| Msa0131460 | Msa1026050 | 0.801924 | 7.157333e-49 | -8.615850e-47 |
| Msa0131460 | Msa1050540 | -0.808523 | 2.969799e-50 | -8.615850e-47 |
| Msa0131460 | Msa1055450 | 0.807818 | 4.197061e-50 | -8.615850e-47 |
| Msa0131460 | Msa1061670 | 0.809747 | 1.624031e-50 | -8.615850e-47 |
| Msa0131460 | Msa1076830 | 0.856172 | 3.849562e-62 | -8.615850e-47 |
| Msa0131460 | Msa1076900 | 0.804303 | 2.304731e-49 | -8.615850e-47 |
| Msa0131460 | Msa1081610 | 0.820150 | 7.985320e-53 | -8.615850e-47 |
| Msa0131460 | Msa1098100 | 0.817121 | 3.885895e-52 | -8.615850e-47 |
| Msa0131460 | Msa1104960 | 0.814792 | 1.285980e-51 | -8.615850e-47 |
| Msa0131460 | Msa1106960 | 0.802778 | 4.773857e-49 | -8.615850e-47 |
| Msa0131460 | Msa1109880 | 0.816689 | 4.858465e-52 | -8.615850e-47 |
| Msa0131460 | Msa1109890 | 0.826377 | 2.804782e-54 | -8.615850e-47 |
| Msa0131460 | Msa1111650 | 0.809160 | 2.170829e-50 | -8.615850e-47 |
| Msa0131460 | Msa1133860 | 0.822290 | 2.563839e-53 | -8.615850e-47 |
| Msa0131460 | Msa1138110 | 0.803860 | 2.849509e-49 | -8.615850e-47 |
| Msa0131460 | Msa1138440 | -0.804808 | 1.807992e-49 | -8.615850e-47 |
| Msa0131460 | Msa1149020 | 0.813247 | 2.818736e-51 | -8.615850e-47 |
| Msa0131460 | Msa1163710 | 0.803633 | 3.175501e-49 | -8.615850e-47 |
| Msa0131460 | Msa1170320 | 0.826053 | 3.349458e-54 | -8.615850e-47 |
| Msa0131460 | Msa1170340 | 0.805470 | 1.314209e-49 | -8.615850e-47 |
| Msa0131460 | Msa1179170 | 0.809299 | 2.026382e-50 | -8.615850e-47 |
| Msa0131460 | Msa1182800 | -0.800005 | 1.765614e-48 | -8.615850e-47 |
| Msa0131460 | Msa1186260 | 0.806357 | 8.556669e-50 | -8.615850e-47 |
| Msa0131460 | Msa1186670 | 0.805274 | 1.444672e-49 | -8.615850e-47 |
| Msa0131460 | Msa1214960 | 0.842556 | 2.405641e-58 | -8.615850e-47 |
| Msa0131460 | Msa1225890 | 0.803562 | 3.286268e-49 | -8.615850e-47 |
| Msa0131460 | Msa1233640 | 0.801439 | 9.000981e-49 | -8.615850e-47 |
| Msa0131460 | Msa1269050 | 0.809472 | 1.860866e-50 | -8.615850e-47 |
| Msa0131460 | Msa1281130 | 0.816735 | 4.743260e-52 | -8.615850e-47 |
| Msa0131460 | Msa1286420 | 0.830107 | 3.537192e-55 | -8.615850e-47 |
| Msa0131460 | Msa1300610 | 0.810199 | 1.298255e-50 | -8.615850e-47 |
| Msa0131460 | Msa1311070 | 0.805004 | 1.645775e-49 | -8.615850e-47 |
| Msa0131460 | Msa1314040 | 0.805978 | 1.028110e-49 | -8.615850e-47 |
| Msa0131460 | Msa1320330 | 0.805581 | 1.245969e-49 | -8.615850e-47 |
| Msa0131460 | Msa1323030 | 0.835679 | 1.457896e-56 | -8.615850e-47 |
| Msa0131460 | Msa1323120 | 0.825211 | 5.303289e-54 | -8.615850e-47 |
| Msa0131460 | Msa1329740 | 0.812571 | 3.965598e-51 | -8.615850e-47 |
| Msa0131460 | Msa1343450 | -0.802231 | 6.189286e-49 | -8.615850e-47 |
| Msa0131460 | Msa1344930 | 0.818884 | 1.552558e-52 | -8.615850e-47 |
| Msa0131460 | Msa1357490 | 0.827089 | 1.896226e-54 | -8.615850e-47 |
| Msa0131460 | Msa1357860 | 0.807613 | 4.639988e-50 | -8.615850e-47 |
| Msa0131460 | Msa1365850 | 0.920369 | 1.397147e-87 | -8.615850e-47 |
| Msa0131460 | Msa1370970 | 0.806608 | 7.575133e-50 | -8.615850e-47 |
| Msa0131460 | Msa1373560 | 0.835707 | 1.434228e-56 | -8.615850e-47 |
| Msa0131460 | Msa1376070 | 0.852524 | 4.363716e-61 | -8.615850e-47 |
| Msa0131460 | Msa1377460 | 0.810624 | 1.050870e-50 | -8.615850e-47 |
| Msa0131460 | Msa1377520 | 0.823605 | 1.266216e-53 | -8.615850e-47 |
| Msa0131460 | Msa1378400 | 0.810318 | 1.223519e-50 | -8.615850e-47 |
| Msa0131460 | Msa1386120 | 0.821254 | 4.453063e-53 | -8.615850e-47 |
| Msa0131460 | Msa1407670 | 0.853603 | 2.142679e-61 | -8.615850e-47 |
| Msa0131460 | Msa1413020 | 0.822753 | 2.000603e-53 | -8.615850e-47 |
| Msa0131460 | Msa1420020 | 0.811251 | 7.686802e-51 | -8.615850e-47 |
| Msa0131460 | Msa1421120 | 0.827412 | 1.586897e-54 | -8.615850e-47 |
| Msa0131460 | Msa1421130 | 0.821213 | 4.550193e-53 | -8.615850e-47 |
| Msa0131460 | Msa1422150 | -0.802756 | 4.823169e-49 | -8.615850e-47 |
| Msa0131460 | Msa1427670 | 0.820419 | 6.930023e-53 | -8.615850e-47 |
| Msa0131460 | Msa1445900 | 0.821223 | 4.526718e-53 | -8.615850e-47 |
| Msa0131460 | Msa1449770 | 0.850365 | 1.780111e-60 | -8.615850e-47 |
| Msa0131460 | Msa1451660 | 0.805349 | 1.393381e-49 | -8.615850e-47 |
| Msa0131460 | Msa1459610 | 0.837047 | 6.543158e-57 | -8.615850e-47 |
| Msa0131460 | Msa1466530 | 0.826216 | 3.063799e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0131460 | MtrunA17_Chr1g0200231 | 81.905 | 210 | 13 | 1 | 1 | 210 | 1 | 185 | 1.91e-122 | 344 |
| Msa0131460 | MtrunA17_Chr1g0200221 | 71.090 | 211 | 35 | 2 | 1 | 210 | 1 | 186 | 1.55e-104 | 299 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0131460 | AT2G35830.2 | 55.882 | 204 | 63 | 3 | 7 | 209 | 8 | 185 | 3.86e-75 | 225 |
| Msa0131460 | AT2G35810.2 | 54.369 | 206 | 62 | 4 | 7 | 209 | 22 | 198 | 7.62e-75 | 224 |
| Msa0131460 | AT2G35810.1 | 54.369 | 206 | 62 | 4 | 7 | 209 | 22 | 198 | 7.62e-75 | 224 |
| Msa0131460 | AT2G35820.1 | 52.195 | 205 | 67 | 3 | 7 | 209 | 8 | 183 | 2.98e-71 | 215 |
| Msa0131460 | AT2G35830.1 | 55.825 | 206 | 55 | 5 | 7 | 209 | 8 | 180 | 3.88e-70 | 212 |
| Msa0131460 | AT2G35820.2 | 52.195 | 205 | 67 | 3 | 7 | 209 | 98 | 273 | 1.38e-69 | 214 |
Find 54 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACCAGACAGCCTGGGTTT+TGG | 0.277909 | 1_3:-62294837 | Msa0131460:CDS |
| GGTGGTAATGTTTGGTATCT+TGG | 0.305200 | 1_3:-62293697 | Msa0131460:CDS |
| CGGTGAAGCTTGACGAATTT+GGG | 0.309643 | 1_3:+62293541 | None:intergenic |
| GCGGTGAAGCTTGACGAATT+TGG | 0.316031 | 1_3:+62293540 | None:intergenic |
| CGTGAAGGTGGTGACAATTA+AGG | 0.355574 | 1_3:-62294913 | Msa0131460:CDS |
| CGAGCCTTCACCAGACAGCC+TGG | 0.372861 | 1_3:-62294844 | Msa0131460:CDS |
| AGAGCATGTCAAATGAATTC+AGG | 0.383024 | 1_3:+62293395 | None:intergenic |
| TTCAGAATCAATTGAAATGT+TGG | 0.413239 | 1_3:+62293198 | None:intergenic |
| GGTCCATTGGTGGTAATGTT+TGG | 0.421411 | 1_3:-62293705 | Msa0131460:CDS |
| ATGAAAACCTGGGAATTCCT+TGG | 0.436299 | 1_3:+62294787 | None:intergenic |
| GACCTGAAATCTTGAAAACT+TGG | 0.446401 | 1_3:+62293563 | None:intergenic |
| GGACCAAAACCCAGGCTGTC+TGG | 0.448168 | 1_3:+62294834 | None:intergenic |
| GATGTAAGATTCCATTGAAA+GGG | 0.457158 | 1_3:+62293427 | None:intergenic |
| GAGATCAAGTTGAGCATCAT+GGG | 0.463032 | 1_3:+62294812 | None:intergenic |
| ACTCAGTGCCTTGGGTCCAT+TGG | 0.468229 | 1_3:-62293718 | Msa0131460:CDS |
| TGAAAACCTGGGAATTCCTT+GGG | 0.471791 | 1_3:+62294788 | None:intergenic |
| GTGATTCTAGAAAACTTTAG+TGG | 0.473787 | 1_3:+62293757 | None:intergenic |
| CAGTGCCTTGGGTCCATTGG+TGG | 0.474720 | 1_3:-62293715 | Msa0131460:CDS |
| ATCTCACCCAAGGAATTCCC+AGG | 0.491993 | 1_3:-62294794 | Msa0131460:intron |
| TGAGATCAAGTTGAGCATCA+TGG | 0.496448 | 1_3:+62294811 | None:intergenic |
| CAAATGTGACTCAGTGCCTT+GGG | 0.497185 | 1_3:-62293726 | Msa0131460:CDS |
| CACCGCGGTACATGGCATGC+TGG | 0.498508 | 1_3:-62293523 | Msa0131460:CDS |
| TCATTTGAATCAACAACTGA+TGG | 0.498895 | 1_3:+62293664 | None:intergenic |
| TCAAGCTTCACCGCGGTACA+TGG | 0.506906 | 1_3:-62293531 | Msa0131460:CDS |
| CCGTAGTCTTTGAAGTTCGC+CGG | 0.533633 | 1_3:+62294876 | None:intergenic |
| CATCATGGGGACCAAAACCC+AGG | 0.536245 | 1_3:+62294826 | None:intergenic |
| GCAAATGTGACTCAGTGCCT+TGG | 0.539728 | 1_3:-62293727 | Msa0131460:CDS |
| ATACCAAACATTACCACCAA+TGG | 0.547916 | 1_3:+62293702 | None:intergenic |
| AGATGTAAGATTCCATTGAA+AGG | 0.548712 | 1_3:+62293426 | None:intergenic |
| GAGCCTTCACCAGACAGCCT+GGG | 0.557955 | 1_3:-62294843 | Msa0131460:CDS |
| AAACCCAGGCTGTCTGGTGA+AGG | 0.563612 | 1_3:+62294840 | None:intergenic |
| AATGAAATCAAAGATGACTC+AGG | 0.574790 | 1_3:-62293646 | Msa0131460:CDS |
| TGATTCTAGAAAACTTTAGT+GGG | 0.575199 | 1_3:+62293758 | None:intergenic |
| TAAGGCGATCGAAGCAACTC+CGG | 0.581240 | 1_3:-62294895 | Msa0131460:CDS |
| TTATGTTCCTCCCACCGTTG+AGG | 0.588581 | 1_3:-62293590 | Msa0131460:CDS |
| CACAACTTTAAGAATGACAA+TGG | 0.590296 | 1_3:-62293265 | Msa0131460:CDS |
| TAATGTTTGGTATCTTGGAG+TGG | 0.602976 | 1_3:-62293692 | Msa0131460:CDS |
| AACTTGGACGTCCTCAACGG+TGG | 0.605196 | 1_3:+62293579 | None:intergenic |
| AATAATGGAGAGCGTGAAGG+TGG | 0.607965 | 1_3:-62294925 | None:intergenic |
| CATTACCACCAATGGACCCA+AGG | 0.621913 | 1_3:+62293710 | None:intergenic |
| AATAATAATGGAGAGCGTGA+AGG | 0.623264 | 1_3:-62294928 | None:intergenic |
| GAAAACTTGGACGTCCTCAA+CGG | 0.628183 | 1_3:+62293576 | None:intergenic |
| CCGGCGAACTTCAAAGACTA+CGG | 0.628730 | 1_3:-62294876 | Msa0131460:CDS |
| TGGACGTCCTCAACGGTGGG+AGG | 0.630671 | 1_3:+62293583 | None:intergenic |
| ACTTGGACGTCCTCAACGGT+GGG | 0.633042 | 1_3:+62293580 | None:intergenic |
| ATGTAAGATTCCATTGAAAG+GGG | 0.634905 | 1_3:+62293428 | None:intergenic |
| GCTCAACTTGATCTCACCCA+AGG | 0.638310 | 1_3:-62294804 | Msa0131460:CDS |
| ATCGTGCTAGACTTAAATAG+AGG | 0.664302 | 1_3:+62293499 | None:intergenic |
| TCTATTTAAGTCTAGCACGA+TGG | 0.669627 | 1_3:-62293497 | Msa0131460:CDS |
| GACCAGCATGCCATGTACCG+CGG | 0.687313 | 1_3:+62293521 | None:intergenic |
| ACGGTCGTTAAGTCGTGCGG+CGG | 0.689464 | 1_3:-62293619 | Msa0131460:CDS |
| AAAACGGTCGTTAAGTCGTG+CGG | 0.693454 | 1_3:-62293622 | Msa0131460:CDS |
| AGATCAAGTTGAGCATCATG+GGG | 0.694936 | 1_3:+62294813 | None:intergenic |
| AAATTCGTCAAGCTTCACCG+CGG | 0.805303 | 1_3:-62293538 | Msa0131460:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATTAACATATAGAATT+TGG | + | chr1_3:62293355-62293374 | None:intergenic | 10.0% |
| !!! | ATTTTTTTCACTTTAATTTT+TGG | - | chr1_3:62293377-62293396 | Msa0131460:intron | 10.0% |
| !!! | TTTTTTTCACTTTAATTTTT+GGG | - | chr1_3:62293378-62293397 | Msa0131460:intron | 10.0% |
| !!! | AACTAATTTTAATAATATGT+TGG | + | chr1_3:62294265-62294284 | None:intergenic | 10.0% |
| !! | AAAAATTAACATATAGAATT+TGG | + | chr1_3:62293355-62293374 | None:intergenic | 10.0% |
| !!! | ATTTTTTTCACTTTAATTTT+TGG | - | chr1_3:62293377-62293396 | Msa0131460:intron | 10.0% |
| !!! | TTTTTTTCACTTTAATTTTT+GGG | - | chr1_3:62293378-62293397 | Msa0131460:intron | 10.0% |
| !!! | AACTAATTTTAATAATATGT+TGG | + | chr1_3:62294265-62294284 | None:intergenic | 10.0% |
| !!! | ATTTTCTTATTTTTGTAAGT+TGG | + | chr1_3:62293327-62293346 | None:intergenic | 15.0% |
| !! | TTAAAGATAACATTTATCTT+TGG | - | chr1_3:62293871-62293890 | Msa0131460:intron | 15.0% |
| !! | AAGGAAACAAAAAAAAAAAA+AGG | + | chr1_3:62293997-62294016 | None:intergenic | 15.0% |
| !!! | TAATTTTAATAATATGTTGG+AGG | + | chr1_3:62294262-62294281 | None:intergenic | 15.0% |
| !!! | ATTTTCTTATTTTTGTAAGT+TGG | + | chr1_3:62293327-62293346 | None:intergenic | 15.0% |
| !! | TTAAAGATAACATTTATCTT+TGG | - | chr1_3:62293871-62293890 | Msa0131460:intron | 15.0% |
| !! | AAGGAAACAAAAAAAAAAAA+AGG | + | chr1_3:62293997-62294016 | None:intergenic | 15.0% |
| !!! | TAATTTTAATAATATGTTGG+AGG | + | chr1_3:62294262-62294281 | None:intergenic | 15.0% |
| !! | GAACTAGTAAAATTTATTAG+AGG | - | chr1_3:62293587-62293606 | Msa0131460:CDS | 20.0% |
| !!! | CCAATAATATATAGTTTTGA+CGG | + | chr1_3:62293670-62293689 | None:intergenic | 20.0% |
| !! | AATGAACTGATATGTTAAAA+AGG | + | chr1_3:62293729-62293748 | None:intergenic | 20.0% |
| !! | AGGAAATATATACATGATAA+TGG | + | chr1_3:62293765-62293784 | None:intergenic | 20.0% |
| !!! | TTTTTTTTGTTTCCTTTTGA+TGG | - | chr1_3:62294001-62294020 | Msa0131460:intron | 20.0% |
| !!! | AAAATTAGTTTGTGTTTTGT+AGG | - | chr1_3:62294275-62294294 | Msa0131460:intron | 20.0% |
| !! | TGAAAAACTTACATTTGTAT+TGG | + | chr1_3:62294632-62294651 | None:intergenic | 20.0% |
| !!! | AATACAAATGTAAGTTTTTC+AGG | - | chr1_3:62294631-62294650 | Msa0131460:intron | 20.0% |
| !!! | TGTCATTTTTTTTAATCGTT+TGG | - | chr1_3:62294746-62294765 | Msa0131460:intron | 20.0% |
| !! | GAACTAGTAAAATTTATTAG+AGG | - | chr1_3:62293587-62293606 | Msa0131460:CDS | 20.0% |
| !!! | CCAATAATATATAGTTTTGA+CGG | + | chr1_3:62293670-62293689 | None:intergenic | 20.0% |
| !! | AATGAACTGATATGTTAAAA+AGG | + | chr1_3:62293729-62293748 | None:intergenic | 20.0% |
| !! | AGGAAATATATACATGATAA+TGG | + | chr1_3:62293765-62293784 | None:intergenic | 20.0% |
| !!! | TTTTTTTTGTTTCCTTTTGA+TGG | - | chr1_3:62294001-62294020 | Msa0131460:intron | 20.0% |
| !!! | AAAATTAGTTTGTGTTTTGT+AGG | - | chr1_3:62294275-62294294 | Msa0131460:intron | 20.0% |
| !! | TGAAAAACTTACATTTGTAT+TGG | + | chr1_3:62294632-62294651 | None:intergenic | 20.0% |
| !!! | AATACAAATGTAAGTTTTTC+AGG | - | chr1_3:62294631-62294650 | Msa0131460:intron | 20.0% |
| !!! | TGTCATTTTTTTTAATCGTT+TGG | - | chr1_3:62294746-62294765 | Msa0131460:intron | 20.0% |
| !!! | TTTCACTTTAATTTTTGGGT+TGG | - | chr1_3:62293382-62293401 | Msa0131460:intron | 25.0% |
| ! | CCGTCAAAACTATATATTAT+TGG | - | chr1_3:62293667-62293686 | Msa0131460:CDS | 25.0% |
| !! | ATCTAAGACATACTACAAAA+CGG | + | chr1_3:62293706-62293725 | None:intergenic | 25.0% |
| ! | CATTATATTTCACACGAATA+AGG | + | chr1_3:62293785-62293804 | None:intergenic | 25.0% |
| ! | AAATGTGACGATTATTAGTA+TGG | - | chr1_3:62293908-62293927 | Msa0131460:intron | 25.0% |
| ! | AATGTGACGATTATTAGTAT+GGG | - | chr1_3:62293909-62293928 | Msa0131460:intron | 25.0% |
| ! | TATATACTACCCTATTATCT+TGG | - | chr1_3:62294040-62294059 | Msa0131460:intron | 25.0% |
| !! | TTTGCTATAAAGTAGTTTAG+TGG | + | chr1_3:62294076-62294095 | None:intergenic | 25.0% |
| ! | TACTTTATAGCAAAATTGAG+AGG | - | chr1_3:62294082-62294101 | Msa0131460:intron | 25.0% |
| !! | TGATTCTAGAAAACTTTAGT+GGG | + | chr1_3:62294327-62294346 | None:intergenic | 25.0% |
| !!! | TGCTTTTTTATTATGTGTAC+AGG | - | chr1_3:62294777-62294796 | Msa0131460:intron | 25.0% |
| ! | TTCAGAATCAATTGAAATGT+TGG | + | chr1_3:62294887-62294906 | None:intergenic | 25.0% |
| !!! | TTTCACTTTAATTTTTGGGT+TGG | - | chr1_3:62293382-62293401 | Msa0131460:intron | 25.0% |
| ! | CCGTCAAAACTATATATTAT+TGG | - | chr1_3:62293667-62293686 | Msa0131460:CDS | 25.0% |
| !! | ATCTAAGACATACTACAAAA+CGG | + | chr1_3:62293706-62293725 | None:intergenic | 25.0% |
| ! | CATTATATTTCACACGAATA+AGG | + | chr1_3:62293785-62293804 | None:intergenic | 25.0% |
| ! | AAATGTGACGATTATTAGTA+TGG | - | chr1_3:62293908-62293927 | Msa0131460:intron | 25.0% |
| ! | AATGTGACGATTATTAGTAT+GGG | - | chr1_3:62293909-62293928 | Msa0131460:intron | 25.0% |
| ! | TATATACTACCCTATTATCT+TGG | - | chr1_3:62294040-62294059 | Msa0131460:intron | 25.0% |
| !! | TTTGCTATAAAGTAGTTTAG+TGG | + | chr1_3:62294076-62294095 | None:intergenic | 25.0% |
| ! | TACTTTATAGCAAAATTGAG+AGG | - | chr1_3:62294082-62294101 | Msa0131460:intron | 25.0% |
| !! | TGATTCTAGAAAACTTTAGT+GGG | + | chr1_3:62294327-62294346 | None:intergenic | 25.0% |
| !!! | TGCTTTTTTATTATGTGTAC+AGG | - | chr1_3:62294777-62294796 | Msa0131460:intron | 25.0% |
| ! | TTCAGAATCAATTGAAATGT+TGG | + | chr1_3:62294887-62294906 | None:intergenic | 25.0% |
| TTGGTGAAATATGAAAACCT+GGG | + | chr1_3:62293308-62293327 | None:intergenic | 30.0% | |
| TACCTATGATTAAGATCGAA+CGG | + | chr1_3:62293454-62293473 | None:intergenic | 30.0% | |
| GATTATTAGTATGGGACATA+GGG | - | chr1_3:62293917-62293936 | Msa0131460:intron | 30.0% | |
| !! | TTTGTTTCCTTTTGATGGTA+TGG | - | chr1_3:62294006-62294025 | Msa0131460:intron | 30.0% |
| AGTTTATCCATACCATCAAA+AGG | + | chr1_3:62294016-62294035 | None:intergenic | 30.0% | |
| CTATAAAGTAGTTTAGTGGT+GGG | + | chr1_3:62294072-62294091 | None:intergenic | 30.0% | |
| TATCAGTTAAATTGAGCTGA+TGG | + | chr1_3:62294184-62294203 | None:intergenic | 30.0% | |
| TAATAATATGTTGGAGGACT+TGG | + | chr1_3:62294256-62294275 | None:intergenic | 30.0% | |
| ! | GTGATTCTAGAAAACTTTAG+TGG | + | chr1_3:62294328-62294347 | None:intergenic | 30.0% |
| TCATTTGAATCAACAACTGA+TGG | + | chr1_3:62294421-62294440 | None:intergenic | 30.0% | |
| AATGAAATCAAAGATGACTC+AGG | - | chr1_3:62294436-62294455 | Msa0131460:intron | 30.0% | |
| ATGTAAGATTCCATTGAAAG+GGG | + | chr1_3:62294657-62294676 | None:intergenic | 30.0% | |
| GATGTAAGATTCCATTGAAA+GGG | + | chr1_3:62294658-62294677 | None:intergenic | 30.0% | |
| AGATGTAAGATTCCATTGAA+AGG | + | chr1_3:62294659-62294678 | None:intergenic | 30.0% | |
| ! | CACAACTTTAAGAATGACAA+TGG | - | chr1_3:62294817-62294836 | Msa0131460:CDS | 30.0% |
| TTGGTGAAATATGAAAACCT+GGG | + | chr1_3:62293308-62293327 | None:intergenic | 30.0% | |
| TACCTATGATTAAGATCGAA+CGG | + | chr1_3:62293454-62293473 | None:intergenic | 30.0% | |
| GATTATTAGTATGGGACATA+GGG | - | chr1_3:62293917-62293936 | Msa0131460:intron | 30.0% | |
| !! | TTTGTTTCCTTTTGATGGTA+TGG | - | chr1_3:62294006-62294025 | Msa0131460:intron | 30.0% |
| AGTTTATCCATACCATCAAA+AGG | + | chr1_3:62294016-62294035 | None:intergenic | 30.0% | |
| CTATAAAGTAGTTTAGTGGT+GGG | + | chr1_3:62294072-62294091 | None:intergenic | 30.0% | |
| TATCAGTTAAATTGAGCTGA+TGG | + | chr1_3:62294184-62294203 | None:intergenic | 30.0% | |
| TAATAATATGTTGGAGGACT+TGG | + | chr1_3:62294256-62294275 | None:intergenic | 30.0% | |
| ! | GTGATTCTAGAAAACTTTAG+TGG | + | chr1_3:62294328-62294347 | None:intergenic | 30.0% |
| TCATTTGAATCAACAACTGA+TGG | + | chr1_3:62294421-62294440 | None:intergenic | 30.0% | |
| AATGAAATCAAAGATGACTC+AGG | - | chr1_3:62294436-62294455 | Msa0131460:intron | 30.0% | |
| ATGTAAGATTCCATTGAAAG+GGG | + | chr1_3:62294657-62294676 | None:intergenic | 30.0% | |
| GATGTAAGATTCCATTGAAA+GGG | + | chr1_3:62294658-62294677 | None:intergenic | 30.0% | |
| AGATGTAAGATTCCATTGAA+AGG | + | chr1_3:62294659-62294678 | None:intergenic | 30.0% | |
| ! | CACAACTTTAAGAATGACAA+TGG | - | chr1_3:62294817-62294836 | Msa0131460:CDS | 30.0% |
| ! | GTTGGTGAAATATGAAAACC+TGG | + | chr1_3:62293309-62293328 | None:intergenic | 35.0% |
| !! | TTTGGGTTGGATTGATCATT+TGG | - | chr1_3:62293395-62293414 | Msa0131460:CDS | 35.0% |
| AACCGTTCGATCTTAATCAT+AGG | - | chr1_3:62293449-62293468 | Msa0131460:CDS | 35.0% | |
| CGATTATTAGTATGGGACAT+AGG | - | chr1_3:62293916-62293935 | Msa0131460:intron | 35.0% | |
| AGTACCAAGTTTACACTGTT+TGG | - | chr1_3:62293940-62293959 | Msa0131460:intron | 35.0% | |
| GTACCAAGTTTACACTGTTT+GGG | - | chr1_3:62293941-62293960 | Msa0131460:intron | 35.0% | |
| GCTATAAAGTAGTTTAGTGG+TGG | + | chr1_3:62294073-62294092 | None:intergenic | 35.0% | |
| TATAGCAAAATTGAGAGGCT+AGG | - | chr1_3:62294087-62294106 | Msa0131460:intron | 35.0% | |
| TGCAAAGTTTCTTTCTTCGA+TGG | + | chr1_3:62294127-62294146 | None:intergenic | 35.0% | |
| ATACCAAACATTACCACCAA+TGG | + | chr1_3:62294383-62294402 | None:intergenic | 35.0% | |
| TAATGTTTGGTATCTTGGAG+TGG | - | chr1_3:62294390-62294409 | Msa0131460:intron | 35.0% | |
| CAAAGATGACTCAGGAAAAA+CGG | - | chr1_3:62294444-62294463 | Msa0131460:intron | 35.0% | |
| !! | GTCCAAGTTTTCAAGATTTC+AGG | - | chr1_3:62294517-62294536 | Msa0131460:intron | 35.0% |
| GACCTGAAATCTTGAAAACT+TGG | + | chr1_3:62294522-62294541 | None:intergenic | 35.0% | |
| ATCGTGCTAGACTTAAATAG+AGG | + | chr1_3:62294586-62294605 | None:intergenic | 35.0% | |
| TCTATTTAAGTCTAGCACGA+TGG | - | chr1_3:62294585-62294604 | Msa0131460:intron | 35.0% | |
| !! | GGACTTTTACAATCTAGAGT+TGG | - | chr1_3:62294606-62294625 | Msa0131460:intron | 35.0% |
| AGAGCATGTCAAATGAATTC+AGG | + | chr1_3:62294690-62294709 | None:intergenic | 35.0% | |
| !! | ATGCTCTTTAGAGTAAGACA+TGG | - | chr1_3:62294703-62294722 | Msa0131460:intron | 35.0% |
| !! | TGCTCTTTAGAGTAAGACAT+GGG | - | chr1_3:62294704-62294723 | Msa0131460:intron | 35.0% |
| ! | GTTGGTGAAATATGAAAACC+TGG | + | chr1_3:62293309-62293328 | None:intergenic | 35.0% |
| !! | TTTGGGTTGGATTGATCATT+TGG | - | chr1_3:62293395-62293414 | Msa0131460:CDS | 35.0% |
| AACCGTTCGATCTTAATCAT+AGG | - | chr1_3:62293449-62293468 | Msa0131460:CDS | 35.0% | |
| CGATTATTAGTATGGGACAT+AGG | - | chr1_3:62293916-62293935 | Msa0131460:intron | 35.0% | |
| AGTACCAAGTTTACACTGTT+TGG | - | chr1_3:62293940-62293959 | Msa0131460:intron | 35.0% | |
| GTACCAAGTTTACACTGTTT+GGG | - | chr1_3:62293941-62293960 | Msa0131460:intron | 35.0% | |
| GCTATAAAGTAGTTTAGTGG+TGG | + | chr1_3:62294073-62294092 | None:intergenic | 35.0% | |
| TATAGCAAAATTGAGAGGCT+AGG | - | chr1_3:62294087-62294106 | Msa0131460:intron | 35.0% | |
| TGCAAAGTTTCTTTCTTCGA+TGG | + | chr1_3:62294127-62294146 | None:intergenic | 35.0% | |
| ATACCAAACATTACCACCAA+TGG | + | chr1_3:62294383-62294402 | None:intergenic | 35.0% | |
| TAATGTTTGGTATCTTGGAG+TGG | - | chr1_3:62294390-62294409 | Msa0131460:intron | 35.0% | |
| CAAAGATGACTCAGGAAAAA+CGG | - | chr1_3:62294444-62294463 | Msa0131460:intron | 35.0% | |
| !! | GTCCAAGTTTTCAAGATTTC+AGG | - | chr1_3:62294517-62294536 | Msa0131460:intron | 35.0% |
| GACCTGAAATCTTGAAAACT+TGG | + | chr1_3:62294522-62294541 | None:intergenic | 35.0% | |
| ATCGTGCTAGACTTAAATAG+AGG | + | chr1_3:62294586-62294605 | None:intergenic | 35.0% | |
| TCTATTTAAGTCTAGCACGA+TGG | - | chr1_3:62294585-62294604 | Msa0131460:intron | 35.0% | |
| !! | GGACTTTTACAATCTAGAGT+TGG | - | chr1_3:62294606-62294625 | Msa0131460:intron | 35.0% |
| AGAGCATGTCAAATGAATTC+AGG | + | chr1_3:62294690-62294709 | None:intergenic | 35.0% | |
| !! | ATGCTCTTTAGAGTAAGACA+TGG | - | chr1_3:62294703-62294722 | Msa0131460:intron | 35.0% |
| !! | TGCTCTTTAGAGTAAGACAT+GGG | - | chr1_3:62294704-62294723 | Msa0131460:intron | 35.0% |
| !! | AGATCAAGTTGAGCATCATG+GGG | + | chr1_3:62293272-62293291 | None:intergenic | 40.0% |
| !! | GAGATCAAGTTGAGCATCAT+GGG | + | chr1_3:62293273-62293292 | None:intergenic | 40.0% |
| !! | TGAGATCAAGTTGAGCATCA+TGG | + | chr1_3:62293274-62293293 | None:intergenic | 40.0% |
| TGAAAACCTGGGAATTCCTT+GGG | + | chr1_3:62293297-62293316 | None:intergenic | 40.0% | |
| ATGAAAACCTGGGAATTCCT+TGG | + | chr1_3:62293298-62293317 | None:intergenic | 40.0% | |
| CAACCCAAACAGTGTAAACT+TGG | + | chr1_3:62293947-62293966 | None:intergenic | 40.0% | |
| GGGTGAATGCCAAGATAATA+GGG | + | chr1_3:62294052-62294071 | None:intergenic | 40.0% | |
| TGGGTGAATGCCAAGATAAT+AGG | + | chr1_3:62294053-62294072 | None:intergenic | 40.0% | |
| ! | GGTGGTAATGTTTGGTATCT+TGG | - | chr1_3:62294385-62294404 | Msa0131460:intron | 40.0% |
| !! | AGATCAAGTTGAGCATCATG+GGG | + | chr1_3:62293272-62293291 | None:intergenic | 40.0% |
| !! | GAGATCAAGTTGAGCATCAT+GGG | + | chr1_3:62293273-62293292 | None:intergenic | 40.0% |
| !! | TGAGATCAAGTTGAGCATCA+TGG | + | chr1_3:62293274-62293293 | None:intergenic | 40.0% |
| TGAAAACCTGGGAATTCCTT+GGG | + | chr1_3:62293297-62293316 | None:intergenic | 40.0% | |
| ATGAAAACCTGGGAATTCCT+TGG | + | chr1_3:62293298-62293317 | None:intergenic | 40.0% | |
| CAACCCAAACAGTGTAAACT+TGG | + | chr1_3:62293947-62293966 | None:intergenic | 40.0% | |
| GGGTGAATGCCAAGATAATA+GGG | + | chr1_3:62294052-62294071 | None:intergenic | 40.0% | |
| TGGGTGAATGCCAAGATAAT+AGG | + | chr1_3:62294053-62294072 | None:intergenic | 40.0% | |
| ! | GGTGGTAATGTTTGGTATCT+TGG | - | chr1_3:62294385-62294404 | Msa0131460:intron | 40.0% |
| CGTGAAGGTGGTGACAATTA+AGG | - | chr1_3:62293169-62293188 | Msa0131460:three_prime_UTR | 45.0% | |
| AGCAAAATTGAGAGGCTAGG+AGG | - | chr1_3:62294090-62294109 | Msa0131460:intron | 45.0% | |
| TGAGAGGCTAGGAGGAATAT+TGG | - | chr1_3:62294098-62294117 | Msa0131460:intron | 45.0% | |
| CAAATGTGACTCAGTGCCTT+GGG | - | chr1_3:62294356-62294375 | Msa0131460:intron | 45.0% | |
| ! | GGTCCATTGGTGGTAATGTT+TGG | - | chr1_3:62294377-62294396 | Msa0131460:intron | 45.0% |
| AAAACGGTCGTTAAGTCGTG+CGG | - | chr1_3:62294460-62294479 | Msa0131460:intron | 45.0% | |
| GAAAACTTGGACGTCCTCAA+CGG | + | chr1_3:62294509-62294528 | None:intergenic | 45.0% | |
| CGGTGAAGCTTGACGAATTT+GGG | + | chr1_3:62294544-62294563 | None:intergenic | 45.0% | |
| AAATTCGTCAAGCTTCACCG+CGG | - | chr1_3:62294544-62294563 | Msa0131460:intron | 45.0% | |
| !!! | GTTTTTCAGGCCCCTTTCAA+TGG | - | chr1_3:62294644-62294663 | Msa0131460:intron | 45.0% |
| CGTGAAGGTGGTGACAATTA+AGG | - | chr1_3:62293169-62293188 | Msa0131460:three_prime_UTR | 45.0% | |
| AGCAAAATTGAGAGGCTAGG+AGG | - | chr1_3:62294090-62294109 | Msa0131460:intron | 45.0% | |
| TGAGAGGCTAGGAGGAATAT+TGG | - | chr1_3:62294098-62294117 | Msa0131460:intron | 45.0% | |
| CAAATGTGACTCAGTGCCTT+GGG | - | chr1_3:62294356-62294375 | Msa0131460:intron | 45.0% | |
| ! | GGTCCATTGGTGGTAATGTT+TGG | - | chr1_3:62294377-62294396 | Msa0131460:intron | 45.0% |
| AAAACGGTCGTTAAGTCGTG+CGG | - | chr1_3:62294460-62294479 | Msa0131460:intron | 45.0% | |
| GAAAACTTGGACGTCCTCAA+CGG | + | chr1_3:62294509-62294528 | None:intergenic | 45.0% | |
| CGGTGAAGCTTGACGAATTT+GGG | + | chr1_3:62294544-62294563 | None:intergenic | 45.0% | |
| AAATTCGTCAAGCTTCACCG+CGG | - | chr1_3:62294544-62294563 | Msa0131460:intron | 45.0% | |
| !!! | GTTTTTCAGGCCCCTTTCAA+TGG | - | chr1_3:62294644-62294663 | Msa0131460:intron | 45.0% |
| TAAGGCGATCGAAGCAACTC+CGG | - | chr1_3:62293187-62293206 | Msa0131460:three_prime_UTR | 50.0% | |
| !! | CCGTAGTCTTTGAAGTTCGC+CGG | + | chr1_3:62293209-62293228 | None:intergenic | 50.0% |
| CCGGCGAACTTCAAAGACTA+CGG | - | chr1_3:62293206-62293225 | Msa0131460:three_prime_UTR | 50.0% | |
| GCTCAACTTGATCTCACCCA+AGG | - | chr1_3:62293278-62293297 | Msa0131460:CDS | 50.0% | |
| ATCTCACCCAAGGAATTCCC+AGG | - | chr1_3:62293288-62293307 | Msa0131460:intron | 50.0% | |
| GCAAATGTGACTCAGTGCCT+TGG | - | chr1_3:62294355-62294374 | Msa0131460:intron | 50.0% | |
| CATTACCACCAATGGACCCA+AGG | + | chr1_3:62294375-62294394 | None:intergenic | 50.0% | |
| TTATGTTCCTCCCACCGTTG+AGG | - | chr1_3:62294492-62294511 | Msa0131460:intron | 50.0% | |
| GCGGTGAAGCTTGACGAATT+TGG | + | chr1_3:62294545-62294564 | None:intergenic | 50.0% | |
| TAAGGCGATCGAAGCAACTC+CGG | - | chr1_3:62293187-62293206 | Msa0131460:three_prime_UTR | 50.0% | |
| !! | CCGTAGTCTTTGAAGTTCGC+CGG | + | chr1_3:62293209-62293228 | None:intergenic | 50.0% |
| CCGGCGAACTTCAAAGACTA+CGG | - | chr1_3:62293206-62293225 | Msa0131460:three_prime_UTR | 50.0% | |
| GCTCAACTTGATCTCACCCA+AGG | - | chr1_3:62293278-62293297 | Msa0131460:CDS | 50.0% | |
| ATCTCACCCAAGGAATTCCC+AGG | - | chr1_3:62293288-62293307 | Msa0131460:intron | 50.0% | |
| GCAAATGTGACTCAGTGCCT+TGG | - | chr1_3:62294355-62294374 | Msa0131460:intron | 50.0% | |
| CATTACCACCAATGGACCCA+AGG | + | chr1_3:62294375-62294394 | None:intergenic | 50.0% | |
| TTATGTTCCTCCCACCGTTG+AGG | - | chr1_3:62294492-62294511 | Msa0131460:intron | 50.0% | |
| GCGGTGAAGCTTGACGAATT+TGG | + | chr1_3:62294545-62294564 | None:intergenic | 50.0% | |
| AAACCCAGGCTGTCTGGTGA+AGG | + | chr1_3:62293245-62293264 | None:intergenic | 55.0% | |
| ! | TCACCAGACAGCCTGGGTTT+TGG | - | chr1_3:62293245-62293264 | Msa0131460:CDS | 55.0% |
| CATCATGGGGACCAAAACCC+AGG | + | chr1_3:62293259-62293278 | None:intergenic | 55.0% | |
| ACTCAGTGCCTTGGGTCCAT+TGG | - | chr1_3:62294364-62294383 | Msa0131460:intron | 55.0% | |
| ACTTGGACGTCCTCAACGGT+GGG | + | chr1_3:62294505-62294524 | None:intergenic | 55.0% | |
| AACTTGGACGTCCTCAACGG+TGG | + | chr1_3:62294506-62294525 | None:intergenic | 55.0% | |
| TCAAGCTTCACCGCGGTACA+TGG | - | chr1_3:62294551-62294570 | Msa0131460:intron | 55.0% | |
| AAACCCAGGCTGTCTGGTGA+AGG | + | chr1_3:62293245-62293264 | None:intergenic | 55.0% | |
| ! | TCACCAGACAGCCTGGGTTT+TGG | - | chr1_3:62293245-62293264 | Msa0131460:CDS | 55.0% |
| CATCATGGGGACCAAAACCC+AGG | + | chr1_3:62293259-62293278 | None:intergenic | 55.0% | |
| ACTCAGTGCCTTGGGTCCAT+TGG | - | chr1_3:62294364-62294383 | Msa0131460:intron | 55.0% | |
| ACTTGGACGTCCTCAACGGT+GGG | + | chr1_3:62294505-62294524 | None:intergenic | 55.0% | |
| AACTTGGACGTCCTCAACGG+TGG | + | chr1_3:62294506-62294525 | None:intergenic | 55.0% | |
| TCAAGCTTCACCGCGGTACA+TGG | - | chr1_3:62294551-62294570 | Msa0131460:intron | 55.0% | |
| GAGCCTTCACCAGACAGCCT+GGG | - | chr1_3:62293239-62293258 | Msa0131460:exon | 60.0% | |
| GGACCAAAACCCAGGCTGTC+TGG | + | chr1_3:62293251-62293270 | None:intergenic | 60.0% | |
| CAGTGCCTTGGGTCCATTGG+TGG | - | chr1_3:62294367-62294386 | Msa0131460:intron | 60.0% | |
| ACGGTCGTTAAGTCGTGCGG+CGG | - | chr1_3:62294463-62294482 | Msa0131460:intron | 60.0% | |
| GACCAGCATGCCATGTACCG+CGG | + | chr1_3:62294564-62294583 | None:intergenic | 60.0% | |
| GAGCCTTCACCAGACAGCCT+GGG | - | chr1_3:62293239-62293258 | Msa0131460:exon | 60.0% | |
| GGACCAAAACCCAGGCTGTC+TGG | + | chr1_3:62293251-62293270 | None:intergenic | 60.0% | |
| CAGTGCCTTGGGTCCATTGG+TGG | - | chr1_3:62294367-62294386 | Msa0131460:intron | 60.0% | |
| ACGGTCGTTAAGTCGTGCGG+CGG | - | chr1_3:62294463-62294482 | Msa0131460:intron | 60.0% | |
| GACCAGCATGCCATGTACCG+CGG | + | chr1_3:62294564-62294583 | None:intergenic | 60.0% | |
| CGAGCCTTCACCAGACAGCC+TGG | - | chr1_3:62293238-62293257 | Msa0131460:exon | 65.0% | |
| TGGACGTCCTCAACGGTGGG+AGG | + | chr1_3:62294502-62294521 | None:intergenic | 65.0% | |
| CACCGCGGTACATGGCATGC+TGG | - | chr1_3:62294559-62294578 | Msa0131460:intron | 65.0% | |
| CGAGCCTTCACCAGACAGCC+TGG | - | chr1_3:62293238-62293257 | Msa0131460:exon | 65.0% | |
| TGGACGTCCTCAACGGTGGG+AGG | + | chr1_3:62294502-62294521 | None:intergenic | 65.0% | |
| CACCGCGGTACATGGCATGC+TGG | - | chr1_3:62294559-62294578 | Msa0131460:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 62293161 | 62294943 | 62293161 | ID=Msa0131460;Name=Msa0131460 |
| chr1_3 | mRNA | 62293161 | 62294943 | 62293161 | ID=Msa0131460-mRNA-1;Parent=Msa0131460;Name=Msa0131460-mRNA-1;_AED=0.39;_eAED=0.39;_QI=0|0.5|0.33|1|1|1|3|79|210 |
| chr1_3 | exon | 62293161 | 62293305 | 62293161 | ID=Msa0131460-mRNA-1:exon:20776;Parent=Msa0131460-mRNA-1 |
| chr1_3 | exon | 62293390 | 62293807 | 62293390 | ID=Msa0131460-mRNA-1:exon:20775;Parent=Msa0131460-mRNA-1 |
| chr1_3 | exon | 62294795 | 62294943 | 62294795 | ID=Msa0131460-mRNA-1:exon:20774;Parent=Msa0131460-mRNA-1 |
| chr1_3 | CDS | 62294795 | 62294943 | 62294795 | ID=Msa0131460-mRNA-1:cds;Parent=Msa0131460-mRNA-1 |
| chr1_3 | CDS | 62293390 | 62293807 | 62293390 | ID=Msa0131460-mRNA-1:cds;Parent=Msa0131460-mRNA-1 |
| chr1_3 | CDS | 62293240 | 62293305 | 62293240 | ID=Msa0131460-mRNA-1:cds;Parent=Msa0131460-mRNA-1 |
| chr1_3 | three_prime_UTR | 62293161 | 62293239 | 62293161 | ID=Msa0131460-mRNA-1:three_prime_utr;Parent=Msa0131460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
