Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1402930 | PNX99521.1 | 78.516 | 256 | 54 | 1 | 1 | 256 | 405 | 659 | 7.93e-139 | 415 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1402930 | sp|Q9LKR4|FRS10_ARATH | 44.048 | 168 | 93 | 1 | 4 | 170 | 507 | 674 | 1.06e-39 | 148 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1402930 | A0A2K3N8Z5 | 78.516 | 256 | 54 | 1 | 1 | 256 | 405 | 659 | 3.79e-139 | 415 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0102070 | Msa1402930 | 0.810202 | 1.295797e-50 | -8.615850e-47 |
| Msa1402930 | Msa1422180 | 0.811319 | 7.429973e-51 | -8.615850e-47 |
| Msa0694370 | Msa1402930 | 0.806144 | 9.485408e-50 | -8.615850e-47 |
| Msa0726140 | Msa1402930 | 0.807503 | 4.896091e-50 | -8.615850e-47 |
| Msa0745060 | Msa1402930 | 0.802614 | 5.161302e-49 | -8.615850e-47 |
| Msa0783160 | Msa1402930 | 0.805226 | 1.478340e-49 | -8.615850e-47 |
| Msa0825860 | Msa1402930 | 0.805285 | 1.436993e-49 | -8.615850e-47 |
| Msa0232850 | Msa1402930 | 0.831769 | 1.383780e-55 | -8.615850e-47 |
| Msa1269670 | Msa1402930 | 0.800367 | 1.490126e-48 | -8.615850e-47 |
| Msa1270230 | Msa1402930 | 0.800735 | 1.253687e-48 | -8.615850e-47 |
| Msa1283330 | Msa1402930 | 0.809406 | 1.922476e-50 | -8.615850e-47 |
| Msa1285930 | Msa1402930 | 0.808724 | 2.690485e-50 | -8.615850e-47 |
| Msa0384800 | Msa1402930 | 0.808978 | 2.374218e-50 | -8.615850e-47 |
| Msa0414420 | Msa1402930 | 0.801658 | 8.114001e-49 | -8.615850e-47 |
| Msa0452900 | Msa1402930 | 0.820950 | 5.231141e-53 | -8.615850e-47 |
| Msa1010810 | Msa1402930 | 0.858671 | 7.018262e-63 | -8.615850e-47 |
| Msa1025360 | Msa1402930 | 0.814599 | 1.419431e-51 | -8.615850e-47 |
| Msa1025370 | Msa1402930 | 0.812602 | 3.903282e-51 | -8.615850e-47 |
| Msa1044830 | Msa1402930 | 0.815187 | 1.051156e-51 | -8.615850e-47 |
| Msa1044840 | Msa1402930 | 0.814524 | 1.474526e-51 | -8.615850e-47 |
| Msa1092990 | Msa1402930 | 0.800840 | 1.193307e-48 | -8.615850e-47 |
| Msa1100980 | Msa1402930 | 0.806906 | 6.553299e-50 | -8.615850e-47 |
| Msa0267000 | Msa1402930 | 0.808960 | 2.395273e-50 | -8.615850e-47 |
| Msa0267010 | Msa1402930 | 0.807035 | 6.152363e-50 | -8.615850e-47 |
| Msa0846210 | Msa1402930 | 0.804199 | 2.422588e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1402930 | MtrunA17_Chr1g0198761 | 73.047 | 256 | 69 | 0 | 1 | 256 | 495 | 750 | 1.31e-135 | 399 |
| Msa1402930 | MtrunA17_Chr5g0430921 | 80.000 | 85 | 17 | 0 | 172 | 256 | 1 | 85 | 1.19e-44 | 145 |
| Msa1402930 | MtrunA17_Chr2g0290391 | 47.429 | 175 | 82 | 3 | 9 | 175 | 504 | 676 | 2.56e-42 | 152 |
| Msa1402930 | MtrunA17_Chr2g0294841 | 33.977 | 259 | 147 | 4 | 1 | 239 | 491 | 745 | 1.01e-40 | 149 |
| Msa1402930 | MtrunA17_Chr2g0276841 | 42.197 | 173 | 94 | 3 | 1 | 170 | 513 | 682 | 7.94e-39 | 143 |
| Msa1402930 | MtrunA17_Chr5g0440451 | 29.825 | 171 | 109 | 4 | 7 | 170 | 489 | 655 | 1.05e-15 | 76.6 |
| Msa1402930 | MtrunA17_Chr5g0448511 | 37.838 | 111 | 65 | 1 | 7 | 113 | 282 | 392 | 4.04e-15 | 74.7 |
| Msa1402930 | MtrunA17_Chr5g0448761 | 31.618 | 136 | 85 | 2 | 8 | 135 | 511 | 646 | 8.94e-14 | 70.9 |
| Msa1402930 | MtrunA17_Chr1g0202341 | 28.108 | 185 | 120 | 4 | 8 | 183 | 495 | 675 | 3.17e-13 | 68.9 |
| Msa1402930 | MtrunA17_Chr3g0118611 | 37.273 | 110 | 65 | 2 | 8 | 113 | 387 | 496 | 6.86e-13 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1402930 | AT5G28530.5 | 44.048 | 168 | 93 | 1 | 4 | 170 | 440 | 607 | 6.06e-41 | 149 |
| Msa1402930 | AT5G28530.4 | 44.048 | 168 | 93 | 1 | 4 | 170 | 444 | 611 | 6.52e-41 | 149 |
| Msa1402930 | AT5G28530.3 | 44.048 | 168 | 93 | 1 | 4 | 170 | 503 | 670 | 1.04e-40 | 148 |
| Msa1402930 | AT5G28530.2 | 44.048 | 168 | 93 | 1 | 4 | 170 | 503 | 670 | 1.04e-40 | 148 |
| Msa1402930 | AT5G28530.1 | 44.048 | 168 | 93 | 1 | 4 | 170 | 507 | 674 | 1.08e-40 | 148 |
| Msa1402930 | AT1G10240.2 | 43.103 | 174 | 91 | 3 | 1 | 170 | 491 | 660 | 1.19e-39 | 145 |
| Msa1402930 | AT1G10240.1 | 43.103 | 174 | 91 | 3 | 1 | 170 | 491 | 660 | 1.19e-39 | 145 |
| Msa1402930 | AT4G38170.1 | 37.607 | 117 | 69 | 2 | 7 | 119 | 284 | 400 | 5.51e-15 | 74.7 |
| Msa1402930 | AT2G27110.2 | 31.579 | 152 | 94 | 5 | 8 | 153 | 465 | 612 | 4.46e-12 | 66.2 |
| Msa1402930 | AT2G27110.1 | 31.579 | 152 | 94 | 5 | 8 | 153 | 465 | 612 | 4.46e-12 | 66.2 |
| Msa1402930 | AT4G38180.1 | 31.818 | 110 | 71 | 1 | 8 | 113 | 520 | 629 | 5.13e-12 | 65.9 |
| Msa1402930 | AT2G27110.3 | 31.579 | 152 | 94 | 5 | 8 | 153 | 320 | 467 | 7.07e-12 | 65.5 |
Find 39 sgRNAs with CRISPR-Local
Find 92 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAATCCAAACTTACTTATT+AGG | 0.125684 | tig0022949:+34590 | Msa1402930:intergenic |
| TCATCACAAACATTGTTATT+TGG | 0.171906 | tig0022949:+34791 | Msa1402930:intergenic |
| CAATCCAAACTTACTTATTA+GGG | 0.237365 | tig0022949:+34591 | Msa1402930:intergenic |
| CTCATGTTGGAGCAACTTAA+AGG | 0.285515 | tig0022949:+35267 | Msa1402930:intergenic |
| GTTGACTACATGGCTAGATT+TGG | 0.300626 | tig0022949:+34988 | Msa1402930:intergenic |
| GCAGCTTCAACTCCTCCTTT+TGG | 0.319527 | tig0022949:+34719 | Msa1402930:intergenic |
| TTGACTACATGGCTAGATTT+GGG | 0.326040 | tig0022949:+34989 | Msa1402930:intergenic |
| TCAATCTCTGATTCGATGTT+TGG | 0.328733 | tig0022949:-34939 | Msa1402930:CDS |
| TCAAGAATATGTGATTGATT+TGG | 0.332734 | tig0022949:-34825 | Msa1402930:CDS |
| TGATCCTCTTGGCCGACCTT+TGG | 0.339991 | tig0022949:+34745 | Msa1402930:intergenic |
| AAAGTCATTCAAGATATAAA+AGG | 0.358979 | tig0022949:-34860 | Msa1402930:CDS |
| GATGCAGCATGTTCCTCAAT+AGG | 0.398909 | tig0022949:+35307 | Msa1402930:intergenic |
| CTTTCTTGTCTCCATCGAAA+AGG | 0.441125 | tig0022949:+35022 | Msa1402930:intergenic |
| GGAAAACATGTTCTGATATG+AGG | 0.442250 | tig0022949:+35328 | Msa1402930:intergenic |
| ACATGTTATTCGTGTGCTAA+TGG | 0.458320 | tig0022949:-35080 | Msa1402930:CDS |
| TTTCTTGTCTCCATCGAAAA+GGG | 0.485154 | tig0022949:+35023 | Msa1402930:intergenic |
| TGATTAGTTCCACCACAACT+TGG | 0.507884 | tig0022949:+34671 | Msa1402930:intergenic |
| CGCTGTCATGTTCCAAGTTG+TGG | 0.511566 | tig0022949:-34683 | Msa1402930:CDS |
| CCAAGAGGATCAAGACCAAA+AGG | 0.514192 | tig0022949:-34734 | Msa1402930:CDS |
| TGGAGCAACTTAAAGGCATA+TGG | 0.514224 | tig0022949:+35274 | Msa1402930:intergenic |
| TAGATAACTCAATCTCATGT+TGG | 0.522807 | tig0022949:+35254 | Msa1402930:intergenic |
| ATGGTGGGCGTCAAGTAAGT+TGG | 0.528714 | tig0022949:-35168 | Msa1402930:CDS |
| TAGCATTGCAGTTGACTACA+TGG | 0.529793 | tig0022949:+34978 | Msa1402930:intergenic |
| CAACATCATACAAAAGTTGA+TGG | 0.542659 | tig0022949:-35187 | Msa1402930:CDS |
| ATCATACAAAAGTTGATGGT+GGG | 0.568308 | tig0022949:-35183 | Msa1402930:CDS |
| TTGTTACAAAATCCAAAGGT+CGG | 0.582656 | tig0022949:-34757 | Msa1402930:CDS |
| CCCATTGTTACAAAATCCAA+AGG | 0.587534 | tig0022949:-34761 | Msa1402930:CDS |
| AATCCAAACTTACTTATTAG+GGG | 0.596179 | tig0022949:+34592 | Msa1402930:intergenic |
| CAGAGATTGAAACTTAGTAG+AGG | 0.604303 | tig0022949:+34952 | Msa1402930:intergenic |
| TGACTACATGGCTAGATTTG+GGG | 0.607240 | tig0022949:+34990 | Msa1402930:intergenic |
| CATCATACAAAAGTTGATGG+TGG | 0.610250 | tig0022949:-35184 | Msa1402930:CDS |
| TACTTATTAGGGGATTGAGA+AGG | 0.610633 | tig0022949:+34602 | Msa1402930:intergenic |
| AAATCCAAAGGTCGGCCAAG+AGG | 0.639624 | tig0022949:-34749 | Msa1402930:CDS |
| AGAGAACGAGTTGCTACTAG+AGG | 0.645909 | tig0022949:-34890 | Msa1402930:CDS |
| GAGGAGTTGAAGCTGCAAAG+AGG | 0.660327 | tig0022949:-34712 | Msa1402930:CDS |
| GCAGCAACTGAAATTGACAA+TGG | 0.666988 | tig0022949:-35223 | Msa1402930:CDS |
| AGAGGATCAAGACCAAAAGG+AGG | 0.673931 | tig0022949:-34731 | Msa1402930:CDS |
| TGTCATGTTCCAAGTTGTGG+TGG | 0.684261 | tig0022949:-34680 | Msa1402930:CDS |
| CTTGGAACATGACAGCGACG+AGG | 0.719993 | tig0022949:+34689 | Msa1402920:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCAATTTTTTTCTTTTTGTT+TGG | + | tig0022949:35321-35340 | Msa1402930:intergenic | 15.0% |
| !!! | TCAATTTTTTTCTTTTTGTT+TGG | + | tig0022949:35321-35340 | Msa1402930:intergenic | 15.0% |
| !! | AAAGTCATTCAAGATATAAA+AGG | - | tig0022949:35090-35109 | Msa1402930:CDS | 20.0% |
| !! | AAAGTCATTCAAGATATAAA+AGG | - | tig0022949:35090-35109 | Msa1402930:CDS | 20.0% |
| !!! | TGTAAAGAATTTGAGTTTTC+TGG | - | tig0022949:34835-34854 | Msa1402930:CDS | 25.0% |
| ! | TCAAGAATATGTGATTGATT+TGG | - | tig0022949:35125-35144 | Msa1402930:CDS | 25.0% |
| !! | TCATCACAAACATTGTTATT+TGG | + | tig0022949:35162-35181 | Msa1402930:intergenic | 25.0% |
| !!! | TGTAAAGAATTTGAGTTTTC+TGG | - | tig0022949:34835-34854 | Msa1402930:CDS | 25.0% |
| ! | TCAAGAATATGTGATTGATT+TGG | - | tig0022949:35125-35144 | Msa1402930:CDS | 25.0% |
| !! | TCATCACAAACATTGTTATT+TGG | + | tig0022949:35162-35181 | Msa1402930:intergenic | 25.0% |
| TAGATAACTCAATCTCATGT+TGG | + | tig0022949:34699-34718 | Msa1402930:intergenic | 30.0% | |
| CAACATCATACAAAAGTTGA+TGG | - | tig0022949:34763-34782 | Msa1402930:CDS | 30.0% | |
| !! | ATCATACAAAAGTTGATGGT+GGG | - | tig0022949:34767-34786 | Msa1402930:CDS | 30.0% |
| !! | GAAAAGGGAGATATTTTGAA+GGG | + | tig0022949:34915-34934 | Msa1402930:intergenic | 30.0% |
| ! | CCTTTGGATTTTGTAACAAT+GGG | + | tig0022949:35192-35211 | Msa1402930:intergenic | 30.0% |
| ! | ACCTTTGGATTTTGTAACAA+TGG | + | tig0022949:35193-35212 | Msa1402930:intergenic | 30.0% |
| TTGTTACAAAATCCAAAGGT+CGG | - | tig0022949:35193-35212 | Msa1402930:CDS | 30.0% | |
| TAGATAACTCAATCTCATGT+TGG | + | tig0022949:34699-34718 | Msa1402930:intergenic | 30.0% | |
| CAACATCATACAAAAGTTGA+TGG | - | tig0022949:34763-34782 | Msa1402930:CDS | 30.0% | |
| !! | ATCATACAAAAGTTGATGGT+GGG | - | tig0022949:34767-34786 | Msa1402930:CDS | 30.0% |
| !! | GAAAAGGGAGATATTTTGAA+GGG | + | tig0022949:34915-34934 | Msa1402930:intergenic | 30.0% |
| ! | CCTTTGGATTTTGTAACAAT+GGG | + | tig0022949:35192-35211 | Msa1402930:intergenic | 30.0% |
| ! | ACCTTTGGATTTTGTAACAA+TGG | + | tig0022949:35193-35212 | Msa1402930:intergenic | 30.0% |
| TTGTTACAAAATCCAAAGGT+CGG | - | tig0022949:35193-35212 | Msa1402930:CDS | 30.0% | |
| GGAAAACATGTTCTGATATG+AGG | + | tig0022949:34625-34644 | None:intergenic | 35.0% | |
| ! | CAGAACATGTTTTCCTATTG+AGG | - | tig0022949:34630-34649 | Msa1402930:CDS | 35.0% |
| !! | CATCATACAAAAGTTGATGG+TGG | - | tig0022949:34766-34785 | Msa1402930:CDS | 35.0% |
| ACATGTTATTCGTGTGCTAA+TGG | - | tig0022949:34870-34889 | Msa1402930:CDS | 35.0% | |
| !! | CGAAAAGGGAGATATTTTGA+AGG | + | tig0022949:34916-34935 | Msa1402930:intergenic | 35.0% |
| ! | CAAAATATCTCCCTTTTCGA+TGG | - | tig0022949:34917-34936 | Msa1402930:CDS | 35.0% |
| TTTCTTGTCTCCATCGAAAA+GGG | + | tig0022949:34930-34949 | Msa1402930:intergenic | 35.0% | |
| TTGACTACATGGCTAGATTT+GGG | + | tig0022949:34964-34983 | Msa1402930:intergenic | 35.0% | |
| CAGAGATTGAAACTTAGTAG+AGG | + | tig0022949:35001-35020 | Msa1402930:intergenic | 35.0% | |
| ! | TCAATCTCTGATTCGATGTT+TGG | - | tig0022949:35011-35030 | Msa1402930:CDS | 35.0% |
| CCCATTGTTACAAAATCCAA+AGG | - | tig0022949:35189-35208 | Msa1402930:CDS | 35.0% | |
| TACTTATTAGGGGATTGAGA+AGG | + | tig0022949:35351-35370 | Msa1402930:intergenic | 35.0% | |
| GGAAAACATGTTCTGATATG+AGG | + | tig0022949:34625-34644 | Msa1402930:intergenic | 35.0% | |
| ! | CAGAACATGTTTTCCTATTG+AGG | - | tig0022949:34630-34649 | Msa1402930:CDS | 35.0% |
| !! | CATCATACAAAAGTTGATGG+TGG | - | tig0022949:34766-34785 | Msa1402930:CDS | 35.0% |
| ACATGTTATTCGTGTGCTAA+TGG | - | tig0022949:34870-34889 | Msa1402930:CDS | 35.0% | |
| !! | CGAAAAGGGAGATATTTTGA+AGG | + | tig0022949:34916-34935 | Msa1402930:intergenic | 35.0% |
| ! | CAAAATATCTCCCTTTTCGA+TGG | - | tig0022949:34917-34936 | Msa1402930:CDS | 35.0% |
| TTTCTTGTCTCCATCGAAAA+GGG | + | tig0022949:34930-34949 | Msa1402930:intergenic | 35.0% | |
| TTGACTACATGGCTAGATTT+GGG | + | tig0022949:34964-34983 | Msa1402930:intergenic | 35.0% | |
| CAGAGATTGAAACTTAGTAG+AGG | + | tig0022949:35001-35020 | Msa1402930:intergenic | 35.0% | |
| ! | TCAATCTCTGATTCGATGTT+TGG | - | tig0022949:35011-35030 | Msa1402930:CDS | 35.0% |
| CCCATTGTTACAAAATCCAA+AGG | - | tig0022949:35189-35208 | Msa1402930:CDS | 35.0% | |
| TACTTATTAGGGGATTGAGA+AGG | + | tig0022949:35351-35370 | Msa1402930:intergenic | 35.0% | |
| ! | TGGAGCAACTTAAAGGCATA+TGG | + | tig0022949:34679-34698 | Msa1402930:intergenic | 40.0% |
| CTCATGTTGGAGCAACTTAA+AGG | + | tig0022949:34686-34705 | Msa1402930:intergenic | 40.0% | |
| GCAGCAACTGAAATTGACAA+TGG | - | tig0022949:34727-34746 | Msa1402930:CDS | 40.0% | |
| !! | AAGGGAGATATTTTGAAGGG+AGG | + | tig0022949:34912-34931 | Msa1402930:intergenic | 40.0% |
| CTTTCTTGTCTCCATCGAAA+AGG | + | tig0022949:34931-34950 | Msa1402930:intergenic | 40.0% | |
| TGACTACATGGCTAGATTTG+GGG | + | tig0022949:34963-34982 | Msa1402930:intergenic | 40.0% | |
| GTTGACTACATGGCTAGATT+TGG | + | tig0022949:34965-34984 | Msa1402930:intergenic | 40.0% | |
| TAGCATTGCAGTTGACTACA+TGG | + | tig0022949:34975-34994 | Msa1402930:intergenic | 40.0% | |
| ! | TGATTAGTTCCACCACAACT+TGG | + | tig0022949:35282-35301 | Msa1402930:intergenic | 40.0% |
| ! | TGGAGCAACTTAAAGGCATA+TGG | + | tig0022949:34679-34698 | Msa1402930:intergenic | 40.0% |
| CTCATGTTGGAGCAACTTAA+AGG | + | tig0022949:34686-34705 | Msa1402930:intergenic | 40.0% | |
| GCAGCAACTGAAATTGACAA+TGG | - | tig0022949:34727-34746 | Msa1402930:CDS | 40.0% | |
| !! | AAGGGAGATATTTTGAAGGG+AGG | + | tig0022949:34912-34931 | Msa1402930:intergenic | 40.0% |
| CTTTCTTGTCTCCATCGAAA+AGG | + | tig0022949:34931-34950 | Msa1402930:intergenic | 40.0% | |
| TGACTACATGGCTAGATTTG+GGG | + | tig0022949:34963-34982 | Msa1402930:intergenic | 40.0% | |
| GTTGACTACATGGCTAGATT+TGG | + | tig0022949:34965-34984 | Msa1402930:intergenic | 40.0% | |
| TAGCATTGCAGTTGACTACA+TGG | + | tig0022949:34975-34994 | Msa1402930:intergenic | 40.0% | |
| ! | TGATTAGTTCCACCACAACT+TGG | + | tig0022949:35282-35301 | Msa1402930:intergenic | 40.0% |
| GATGCAGCATGTTCCTCAAT+AGG | + | tig0022949:34646-34665 | Msa1402930:intergenic | 45.0% | |
| AGAGAACGAGTTGCTACTAG+AGG | - | tig0022949:35060-35079 | Msa1402930:CDS | 45.0% | |
| !!! | CCTTTTGGTCTTGATCCTCT+TGG | + | tig0022949:35219-35238 | Msa1402930:intergenic | 45.0% |
| CCAAGAGGATCAAGACCAAA+AGG | - | tig0022949:35216-35235 | Msa1402930:CDS | 45.0% | |
| AGAGGATCAAGACCAAAAGG+AGG | - | tig0022949:35219-35238 | Msa1402930:CDS | 45.0% | |
| TGTCATGTTCCAAGTTGTGG+TGG | - | tig0022949:35270-35289 | Msa1402930:CDS | 45.0% | |
| GATGCAGCATGTTCCTCAAT+AGG | + | tig0022949:34646-34665 | Msa1402930:intergenic | 45.0% | |
| AGAGAACGAGTTGCTACTAG+AGG | - | tig0022949:35060-35079 | Msa1402930:CDS | 45.0% | |
| !!! | CCTTTTGGTCTTGATCCTCT+TGG | + | tig0022949:35219-35238 | Msa1402930:intergenic | 45.0% |
| CCAAGAGGATCAAGACCAAA+AGG | - | tig0022949:35216-35235 | Msa1402930:CDS | 45.0% | |
| AGAGGATCAAGACCAAAAGG+AGG | - | tig0022949:35219-35238 | Msa1402930:CDS | 45.0% | |
| TGTCATGTTCCAAGTTGTGG+TGG | - | tig0022949:35270-35289 | Msa1402930:CDS | 45.0% | |
| !! | ATGGTGGGCGTCAAGTAAGT+TGG | - | tig0022949:34782-34801 | Msa1402930:CDS | 50.0% |
| AAATCCAAAGGTCGGCCAAG+AGG | - | tig0022949:35201-35220 | Msa1402930:CDS | 50.0% | |
| ! | GCAGCTTCAACTCCTCCTTT+TGG | + | tig0022949:35234-35253 | Msa1402930:intergenic | 50.0% |
| GAGGAGTTGAAGCTGCAAAG+AGG | - | tig0022949:35238-35257 | Msa1402930:CDS | 50.0% | |
| CGCTGTCATGTTCCAAGTTG+TGG | - | tig0022949:35267-35286 | Msa1402930:CDS | 50.0% | |
| !! | ATGGTGGGCGTCAAGTAAGT+TGG | - | tig0022949:34782-34801 | Msa1402930:CDS | 50.0% |
| AAATCCAAAGGTCGGCCAAG+AGG | - | tig0022949:35201-35220 | Msa1402930:CDS | 50.0% | |
| ! | GCAGCTTCAACTCCTCCTTT+TGG | + | tig0022949:35234-35253 | Msa1402930:intergenic | 50.0% |
| GAGGAGTTGAAGCTGCAAAG+AGG | - | tig0022949:35238-35257 | Msa1402930:CDS | 50.0% | |
| CGCTGTCATGTTCCAAGTTG+TGG | - | tig0022949:35267-35286 | Msa1402930:CDS | 50.0% | |
| TGATCCTCTTGGCCGACCTT+TGG | + | tig0022949:35208-35227 | Msa1402930:intergenic | 55.0% | |
| CTTGGAACATGACAGCGACG+AGG | + | tig0022949:35264-35283 | Msa1402930:intergenic | 55.0% | |
| TGATCCTCTTGGCCGACCTT+TGG | + | tig0022949:35208-35227 | Msa1402930:intergenic | 55.0% | |
| CTTGGAACATGACAGCGACG+AGG | + | tig0022949:35264-35283 | Msa1402930:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0022949 | gene | 34601 | 35371 | 34601 | ID=Msa1402930;Name=Msa1402930 |
| tig0022949 | mRNA | 34601 | 35371 | 34601 | ID=Msa1402930-mRNA-1;Parent=Msa1402930;Name=Msa1402930-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0|-1|0|1|-1|1|1|0|256 |
| tig0022949 | exon | 34601 | 35371 | 34601 | ID=Msa1402930-mRNA-1:exon:19138;Parent=Msa1402930-mRNA-1 |
| tig0022949 | CDS | 34601 | 35371 | 34601 | ID=Msa1402930-mRNA-1:cds;Parent=Msa1402930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
