Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0694370 | KEH43958.1 | 52.632 | 247 | 110 | 1 | 3 | 242 | 4 | 250 | 2.65e-91 | 280 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0694370 | G8A101 | 52.632 | 247 | 110 | 1 | 3 | 242 | 4 | 250 | 1.27e-91 | 280 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012700 | Msa0694370 | 0.820719 | 5.912921e-53 | -8.615850e-47 |
| Msa0013750 | Msa0694370 | 0.806449 | 8.181069e-50 | -8.615850e-47 |
| Msa0016570 | Msa0694370 | 0.849768 | 2.615786e-60 | -8.615850e-47 |
| Msa0016580 | Msa0694370 | 0.836490 | 9.074626e-57 | -8.615850e-47 |
| Msa0056530 | Msa0694370 | 0.819391 | 1.190365e-52 | -8.615850e-47 |
| Msa0064970 | Msa0694370 | 0.822900 | 1.848955e-53 | -8.615850e-47 |
| Msa0067140 | Msa0694370 | 0.800456 | 1.428968e-48 | -8.615850e-47 |
| Msa0071500 | Msa0694370 | 0.815300 | 9.921277e-52 | -8.615850e-47 |
| Msa0102070 | Msa0694370 | 0.819915 | 9.038765e-53 | -8.615850e-47 |
| Msa0110270 | Msa0694370 | 0.829245 | 5.734647e-55 | -8.615850e-47 |
| Msa0111510 | Msa0694370 | 0.849361 | 3.397875e-60 | -8.615850e-47 |
| Msa0113560 | Msa0694370 | 0.802832 | 4.653527e-49 | -8.615850e-47 |
| Msa0604350 | Msa0694370 | 0.849394 | 3.327111e-60 | -8.615850e-47 |
| Msa0636170 | Msa0694370 | 0.847673 | 9.965963e-60 | -8.615850e-47 |
| Msa0639610 | Msa0694370 | 0.809666 | 1.690790e-50 | -8.615850e-47 |
| Msa0650630 | Msa0694370 | 0.818724 | 1.688559e-52 | -8.615850e-47 |
| Msa0661230 | Msa0694370 | 0.823959 | 1.045683e-53 | -8.615850e-47 |
| Msa0672690 | Msa0694370 | 0.803124 | 4.049783e-49 | -8.615850e-47 |
| Msa0678930 | Msa0694370 | 0.833610 | 4.831262e-56 | -8.615850e-47 |
| Msa0688270 | Msa0694370 | 0.809500 | 1.834613e-50 | -8.615850e-47 |
| Msa0694370 | Msa0697040 | 0.801119 | 1.046692e-48 | -8.615850e-47 |
| Msa0694370 | Msa0697060 | 0.811948 | 5.422548e-51 | -8.615850e-47 |
| Msa0694370 | Msa0701010 | 0.802306 | 5.971952e-49 | -8.615850e-47 |
| Msa0694370 | Msa0726140 | 0.860423 | 2.087206e-63 | -8.615850e-47 |
| Msa0694370 | Msa0728060 | 0.822342 | 2.493644e-53 | -8.615850e-47 |
| Msa0694370 | Msa0729800 | 0.844665 | 6.568447e-59 | -8.615850e-47 |
| Msa0694370 | Msa0731940 | 0.817843 | 2.672181e-52 | -8.615850e-47 |
| Msa0694370 | Msa0732710 | 0.801650 | 8.145612e-49 | -8.615850e-47 |
| Msa0694370 | Msa0733290 | 0.840209 | 9.977013e-58 | -8.615850e-47 |
| Msa0694370 | Msa0735170 | 0.806562 | 7.745093e-50 | -8.615850e-47 |
| Msa0694370 | Msa0741990 | 0.816744 | 4.723165e-52 | -8.615850e-47 |
| Msa0694370 | Msa0743810 | 0.867164 | 1.674406e-65 | -8.615850e-47 |
| Msa0694370 | Msa0745060 | 0.865645 | 5.082061e-65 | -8.615850e-47 |
| Msa0694370 | Msa0753720 | 0.807344 | 5.292595e-50 | -8.615850e-47 |
| Msa0694370 | Msa0760130 | 0.808884 | 2.487487e-50 | -8.615850e-47 |
| Msa0694370 | Msa0762360 | 0.832561 | 8.811634e-56 | -8.615850e-47 |
| Msa0694370 | Msa0763440 | 0.802454 | 5.568060e-49 | -8.615850e-47 |
| Msa0694370 | Msa0764960 | 0.806311 | 8.750432e-50 | -8.615850e-47 |
| Msa0694370 | Msa0766630 | 0.856561 | 2.961163e-62 | -8.615850e-47 |
| Msa0694370 | Msa0767720 | 0.843172 | 1.650329e-58 | -8.615850e-47 |
| Msa0694370 | Msa0768290 | 0.802113 | 6.545139e-49 | -8.615850e-47 |
| Msa0694370 | Msa0768370 | 0.800587 | 1.343822e-48 | -8.615850e-47 |
| Msa0694370 | Msa0775300 | 0.803450 | 3.465597e-49 | -8.615850e-47 |
| Msa0694370 | Msa0783160 | 0.843083 | 1.742270e-58 | -8.615850e-47 |
| Msa0694370 | Msa0784290 | 0.811046 | 8.515757e-51 | -8.615850e-47 |
| Msa0694370 | Msa0787600 | 0.829997 | 3.762849e-55 | -8.615850e-47 |
| Msa0694370 | Msa0789250 | 0.807615 | 4.636430e-50 | -8.615850e-47 |
| Msa0694370 | Msa0808010 | 0.847470 | 1.132901e-59 | -8.615850e-47 |
| Msa0694370 | Msa0808020 | 0.835777 | 1.377394e-56 | -8.615850e-47 |
| Msa0694370 | Msa0811080 | 0.830350 | 3.085392e-55 | -8.615850e-47 |
| Msa0694370 | Msa0820150 | 0.807758 | 4.323118e-50 | -8.615850e-47 |
| Msa0694370 | Msa0824600 | 0.813463 | 2.527406e-51 | -8.615850e-47 |
| Msa0694370 | Msa0825860 | 0.862143 | 6.244943e-64 | -8.615850e-47 |
| Msa0694370 | Msa0833290 | 0.806163 | 9.398557e-50 | -8.615850e-47 |
| Msa0694370 | Msa0846210 | 0.886478 | 3.302855e-72 | -8.615850e-47 |
| Msa0694370 | Msa0846330 | 0.839272 | 1.750007e-57 | -8.615850e-47 |
| Msa0694370 | Msa0846350 | 0.839588 | 1.448203e-57 | -8.615850e-47 |
| Msa0694370 | Msa0848060 | 0.812498 | 4.112401e-51 | -8.615850e-47 |
| Msa0694370 | Msa0848960 | 0.826189 | 3.109039e-54 | -8.615850e-47 |
| Msa0694370 | Msa0858980 | 0.826715 | 2.330262e-54 | -8.615850e-47 |
| Msa0694370 | Msa0864070 | 0.806173 | 9.353195e-50 | -8.615850e-47 |
| Msa0694370 | Msa0865320 | 0.845209 | 4.683198e-59 | -8.615850e-47 |
| Msa0694370 | Msa0872230 | 0.805642 | 1.209474e-49 | -8.615850e-47 |
| Msa0694370 | Msa0877250 | 0.816434 | 5.542169e-52 | -8.615850e-47 |
| Msa0694370 | Msa0885280 | 0.820030 | 8.508143e-53 | -8.615850e-47 |
| Msa0694370 | Msa0885290 | 0.841667 | 4.135283e-58 | -8.615850e-47 |
| Msa0694370 | Msa0888370 | 0.855025 | 8.318836e-62 | -8.615850e-47 |
| Msa0694370 | Msa0888420 | 0.812787 | 3.555679e-51 | -8.615850e-47 |
| Msa0694370 | Msa0889850 | 0.804720 | 1.886543e-49 | -8.615850e-47 |
| Msa0694370 | Msa0896080 | 0.801022 | 1.095195e-48 | -8.615850e-47 |
| Msa0694370 | Msa0899430 | 0.818769 | 1.649303e-52 | -8.615850e-47 |
| Msa0694370 | Msa0899450 | 0.810171 | 1.315904e-50 | -8.615850e-47 |
| Msa0694370 | Msa0907070 | 0.807342 | 5.297850e-50 | -8.615850e-47 |
| Msa0694370 | Msa0907260 | 0.846684 | 1.860952e-59 | -8.615850e-47 |
| Msa0694370 | Msa0927380 | 0.803074 | 4.146272e-49 | -8.615850e-47 |
| Msa0694370 | Msa0931520 | 0.801000 | 1.106586e-48 | -8.615850e-47 |
| Msa0694370 | Msa0935640 | 0.800205 | 1.607299e-48 | -8.615850e-47 |
| Msa0694370 | Msa0935910 | 0.820181 | 7.857198e-53 | -8.615850e-47 |
| Msa0694370 | Msa0953120 | 0.808796 | 2.597571e-50 | -8.615850e-47 |
| Msa0694370 | Msa0954910 | 0.854911 | 8.977050e-62 | -8.615850e-47 |
| Msa0694370 | Msa0956270 | 0.841731 | 3.978560e-58 | -8.615850e-47 |
| Msa0694370 | Msa0957860 | 0.820619 | 6.232526e-53 | -8.615850e-47 |
| Msa0694370 | Msa0957960 | 0.820098 | 8.206085e-53 | -8.615850e-47 |
| Msa0694370 | Msa0958550 | 0.808596 | 2.865298e-50 | -8.615850e-47 |
| Msa0694370 | Msa0969450 | 0.826952 | 2.045460e-54 | -8.615850e-47 |
| Msa0694370 | Msa0969520 | 0.805276 | 1.443600e-49 | -8.615850e-47 |
| Msa0694370 | Msa0979410 | 0.816220 | 6.188221e-52 | -8.615850e-47 |
| Msa0694370 | Msa0981370 | 0.820177 | 7.873781e-53 | -8.615850e-47 |
| Msa0694370 | Msa0983090 | 0.801374 | 9.279831e-49 | -8.615850e-47 |
| Msa0694370 | Msa0989060 | 0.855547 | 5.863840e-62 | -8.615850e-47 |
| Msa0694370 | Msa1002810 | 0.850725 | 1.410188e-60 | -8.615850e-47 |
| Msa0694370 | Msa1014540 | 0.824124 | 9.568240e-54 | -8.615850e-47 |
| Msa0694370 | Msa1014990 | 0.806360 | 8.543871e-50 | -8.615850e-47 |
| Msa0694370 | Msa1015950 | 0.802613 | 5.163437e-49 | -8.615850e-47 |
| Msa0694370 | Msa1016280 | 0.849855 | 2.472806e-60 | -8.615850e-47 |
| Msa0694370 | Msa1023050 | 0.836579 | 8.614936e-57 | -8.615850e-47 |
| Msa0694370 | Msa1023950 | 0.800781 | 1.227035e-48 | -8.615850e-47 |
| Msa0694370 | Msa1024240 | 0.830921 | 2.236605e-55 | -8.615850e-47 |
| Msa0694370 | Msa1025360 | 0.860372 | 2.162759e-63 | -8.615850e-47 |
| Msa0694370 | Msa1025370 | 0.857417 | 1.656135e-62 | -8.615850e-47 |
| Msa0694370 | Msa1029240 | 0.826908 | 2.095178e-54 | -8.615850e-47 |
| Msa0694370 | Msa1044830 | 0.857781 | 1.291743e-62 | -8.615850e-47 |
| Msa0694370 | Msa1044840 | 0.859989 | 2.823374e-63 | -8.615850e-47 |
| Msa0694370 | Msa1054790 | 0.828233 | 1.007529e-54 | -8.615850e-47 |
| Msa0694370 | Msa1065570 | 0.825074 | 5.716390e-54 | -8.615850e-47 |
| Msa0694370 | Msa1092990 | 0.863939 | 1.739471e-64 | -8.615850e-47 |
| Msa0694370 | Msa1099970 | 0.837846 | 4.084557e-57 | -8.615850e-47 |
| Msa0694370 | Msa1100980 | 0.863326 | 2.696529e-64 | -8.615850e-47 |
| Msa0694370 | Msa1109440 | 0.825845 | 3.754183e-54 | -8.615850e-47 |
| Msa0694370 | Msa1111150 | 0.855769 | 5.050767e-62 | -8.615850e-47 |
| Msa0694370 | Msa1112300 | 0.830480 | 2.868425e-55 | -8.615850e-47 |
| Msa0694370 | Msa1114030 | 0.810144 | 1.333964e-50 | -8.615850e-47 |
| Msa0694370 | Msa1116260 | 0.809447 | 1.884013e-50 | -8.615850e-47 |
| Msa0694370 | Msa1117150 | 0.807492 | 4.923352e-50 | -8.615850e-47 |
| Msa0694370 | Msa1120610 | 0.804834 | 1.786161e-49 | -8.615850e-47 |
| Msa0694370 | Msa1121200 | 0.838161 | 3.388983e-57 | -8.615850e-47 |
| Msa0694370 | Msa1121480 | 0.838096 | 3.523576e-57 | -8.615850e-47 |
| Msa0694370 | Msa1121490 | 0.841251 | 5.321059e-58 | -8.615850e-47 |
| Msa0694370 | Msa1135220 | 0.807709 | 4.427163e-50 | -8.615850e-47 |
| Msa0694370 | Msa1135740 | 0.852504 | 4.421304e-61 | -8.615850e-47 |
| Msa0694370 | Msa1136090 | 0.838013 | 3.700693e-57 | -8.615850e-47 |
| Msa0694370 | Msa1146110 | 0.833445 | 5.310229e-56 | -8.615850e-47 |
| Msa0694370 | Msa1150370 | 0.848778 | 4.933412e-60 | -8.615850e-47 |
| Msa0694370 | Msa1160670 | 0.808435 | 3.101746e-50 | -8.615850e-47 |
| Msa0694370 | Msa1187940 | 0.845447 | 4.038923e-59 | -8.615850e-47 |
| Msa0694370 | Msa1187950 | 0.842825 | 2.041279e-58 | -8.615850e-47 |
| Msa0694370 | Msa1192640 | 0.832646 | 8.395398e-56 | -8.615850e-47 |
| Msa0694370 | Msa1246880 | 0.835151 | 1.983176e-56 | -8.615850e-47 |
| Msa0694370 | Msa1248310 | 0.816947 | 4.252487e-52 | -8.615850e-47 |
| Msa0694370 | Msa1248370 | 0.813410 | 2.595479e-51 | -8.615850e-47 |
| Msa0694370 | Msa1253000 | 0.815670 | 8.208798e-52 | -8.615850e-47 |
| Msa0694370 | Msa1260100 | 0.805068 | 1.596003e-49 | -8.615850e-47 |
| Msa0694370 | Msa1269670 | 0.858567 | 7.540208e-63 | -8.615850e-47 |
| Msa0694370 | Msa1270230 | 0.847971 | 8.251256e-60 | -8.615850e-47 |
| Msa0694370 | Msa1270240 | 0.821189 | 4.608158e-53 | -8.615850e-47 |
| Msa0694370 | Msa1270270 | 0.826618 | 2.457731e-54 | -8.615850e-47 |
| Msa0694370 | Msa1273230 | 0.800260 | 1.566298e-48 | -8.615850e-47 |
| Msa0694370 | Msa1277660 | 0.810565 | 1.081864e-50 | -8.615850e-47 |
| Msa0694370 | Msa1283330 | 0.830362 | 3.065237e-55 | -8.615850e-47 |
| Msa0694370 | Msa1284680 | 0.817458 | 3.263847e-52 | -8.615850e-47 |
| Msa0694370 | Msa1285930 | 0.854266 | 1.380522e-61 | -8.615850e-47 |
| Msa0694370 | Msa1287800 | 0.839961 | 1.158482e-57 | -8.615850e-47 |
| Msa0694370 | Msa1287810 | 0.850068 | 2.155677e-60 | -8.615850e-47 |
| Msa0694370 | Msa1288560 | 0.830564 | 2.735770e-55 | -8.615850e-47 |
| Msa0694370 | Msa1289430 | 0.817042 | 4.048548e-52 | -8.615850e-47 |
| Msa0694370 | Msa1292570 | 0.800102 | 1.686627e-48 | -8.615850e-47 |
| Msa0694370 | Msa1297210 | 0.832341 | 9.989704e-56 | -8.615850e-47 |
| Msa0694370 | Msa1307890 | 0.828709 | 7.732900e-55 | -8.615850e-47 |
| Msa0694370 | Msa1320300 | 0.837462 | 5.126158e-57 | -8.615850e-47 |
| Msa0694370 | Msa1340590 | 0.866674 | 2.399434e-65 | -8.615850e-47 |
| Msa0694370 | Msa1344520 | 0.841270 | 5.261499e-58 | -8.615850e-47 |
| Msa0694370 | Msa1353470 | 0.802828 | 4.662444e-49 | -8.615850e-47 |
| Msa0694370 | Msa1360610 | 0.802504 | 5.436135e-49 | -8.615850e-47 |
| Msa0694370 | Msa1382690 | 0.802078 | 6.654746e-49 | -8.615850e-47 |
| Msa0694370 | Msa1382700 | 0.809422 | 1.907558e-50 | -8.615850e-47 |
| Msa0694370 | Msa1386330 | 0.840970 | 6.308640e-58 | -8.615850e-47 |
| Msa0694370 | Msa1397580 | 0.871596 | 6.059307e-67 | -8.615850e-47 |
| Msa0694370 | Msa1397860 | 0.843188 | 1.633839e-58 | -8.615850e-47 |
| Msa0694370 | Msa1402930 | 0.806144 | 9.485408e-50 | -8.615850e-47 |
| Msa0694370 | Msa1404000 | 0.851512 | 8.456766e-61 | -8.615850e-47 |
| Msa0694370 | Msa1415310 | 0.819687 | 1.018851e-52 | -8.615850e-47 |
| Msa0694370 | Msa1422180 | 0.937548 | 2.895656e-98 | -8.615850e-47 |
| Msa0694370 | Msa1433120 | 0.836647 | 8.279878e-57 | -8.615850e-47 |
| Msa0694370 | Msa1451190 | 0.805721 | 1.164447e-49 | -8.615850e-47 |
| Msa0694370 | Msa1451570 | 0.846826 | 1.701386e-59 | -8.615850e-47 |
| Msa0694370 | Msa1466540 | 0.818317 | 2.087419e-52 | -8.615850e-47 |
| Msa0123810 | Msa0694370 | 0.816774 | 4.649037e-52 | -8.615850e-47 |
| Msa0131770 | Msa0694370 | 0.808922 | 2.440838e-50 | -8.615850e-47 |
| Msa0142220 | Msa0694370 | 0.861544 | 9.525406e-64 | -8.615850e-47 |
| Msa0145750 | Msa0694370 | 0.816382 | 5.690882e-52 | -8.615850e-47 |
| Msa0153910 | Msa0694370 | 0.825105 | 5.618330e-54 | -8.615850e-47 |
| Msa0175740 | Msa0694370 | 0.803568 | 3.275489e-49 | -8.615850e-47 |
| Msa0188460 | Msa0694370 | 0.820591 | 6.326255e-53 | -8.615850e-47 |
| Msa0197010 | Msa0694370 | 0.811586 | 6.502335e-51 | -8.615850e-47 |
| Msa0200000 | Msa0694370 | 0.834168 | 3.503315e-56 | -8.615850e-47 |
| Msa0208090 | Msa0694370 | 0.827113 | 1.871220e-54 | -8.615850e-47 |
| Msa0227480 | Msa0694370 | 0.835933 | 1.257389e-56 | -8.615850e-47 |
| Msa0232850 | Msa0694370 | 0.854077 | 1.564465e-61 | -8.615850e-47 |
| Msa0233300 | Msa0694370 | 0.824204 | 9.159073e-54 | -8.615850e-47 |
| Msa0235140 | Msa0694370 | 0.816280 | 5.998866e-52 | -8.615850e-47 |
| Msa0365500 | Msa0694370 | 0.837899 | 3.959554e-57 | -8.615850e-47 |
| Msa0366580 | Msa0694370 | 0.818217 | 2.199833e-52 | -8.615850e-47 |
| Msa0371730 | Msa0694370 | 0.850911 | 1.249725e-60 | -8.615850e-47 |
| Msa0375870 | Msa0694370 | 0.804318 | 2.288202e-49 | -8.615850e-47 |
| Msa0384800 | Msa0694370 | 0.835865 | 1.308159e-56 | -8.615850e-47 |
| Msa0384890 | Msa0694370 | 0.821507 | 3.891245e-53 | -8.615850e-47 |
| Msa0390070 | Msa0694370 | 0.825017 | 5.895869e-54 | -8.615850e-47 |
| Msa0394970 | Msa0694370 | 0.839237 | 1.786358e-57 | -8.615850e-47 |
| Msa0402290 | Msa0694370 | 0.836424 | 9.434083e-57 | -8.615850e-47 |
| Msa0406120 | Msa0694370 | 0.805991 | 1.021441e-49 | -8.615850e-47 |
| Msa0407750 | Msa0694370 | 0.806014 | 1.010531e-49 | -8.615850e-47 |
| Msa0414410 | Msa0694370 | 0.829727 | 4.377597e-55 | -8.615850e-47 |
| Msa0414420 | Msa0694370 | 0.842745 | 2.144011e-58 | -8.615850e-47 |
| Msa0424320 | Msa0694370 | 0.800995 | 1.109464e-48 | -8.615850e-47 |
| Msa0424550 | Msa0694370 | 0.816645 | 4.969935e-52 | -8.615850e-47 |
| Msa0430420 | Msa0694370 | 0.801535 | 8.600965e-49 | -8.615850e-47 |
| Msa0435230 | Msa0694370 | 0.836689 | 8.074706e-57 | -8.615850e-47 |
| Msa0436780 | Msa0694370 | 0.836817 | 7.490424e-57 | -8.615850e-47 |
| Msa0436800 | Msa0694370 | 0.811033 | 8.571196e-51 | -8.615850e-47 |
| Msa0437990 | Msa0694370 | 0.801585 | 8.400798e-49 | -8.615850e-47 |
| Msa0438620 | Msa0694370 | 0.803839 | 2.878845e-49 | -8.615850e-47 |
| Msa0444130 | Msa0694370 | 0.842357 | 2.716849e-58 | -8.615850e-47 |
| Msa0450000 | Msa0694370 | 0.810744 | 9.897280e-51 | -8.615850e-47 |
| Msa0452900 | Msa0694370 | 0.861474 | 1.000009e-63 | -8.615850e-47 |
| Msa0453120 | Msa0694370 | 0.840556 | 8.100225e-58 | -8.615850e-47 |
| Msa0454370 | Msa0694370 | 0.812667 | 3.778733e-51 | -8.615850e-47 |
| Msa0454910 | Msa0694370 | 0.814321 | 1.635056e-51 | -8.615850e-47 |
| Msa0459160 | Msa0694370 | 0.829675 | 4.507566e-55 | -8.615850e-47 |
| Msa0466120 | Msa0694370 | 0.832483 | 9.212332e-56 | -8.615850e-47 |
| Msa0471380 | Msa0694370 | 0.837671 | 4.530196e-57 | -8.615850e-47 |
| Msa0479340 | Msa0694370 | 0.848185 | 7.199272e-60 | -8.615850e-47 |
| Msa0251320 | Msa0694370 | 0.815078 | 1.111564e-51 | -8.615850e-47 |
| Msa0267000 | Msa0694370 | 0.848636 | 5.401859e-60 | -8.615850e-47 |
| Msa0267010 | Msa0694370 | 0.854598 | 1.106118e-61 | -8.615850e-47 |
| Msa0270520 | Msa0694370 | 0.825622 | 4.240928e-54 | -8.615850e-47 |
| Msa0273100 | Msa0694370 | 0.824401 | 8.236127e-54 | -8.615850e-47 |
| Msa0288100 | Msa0694370 | 0.800202 | 1.609755e-48 | -8.615850e-47 |
| Msa0290870 | Msa0694370 | 0.821832 | 3.274489e-53 | -8.615850e-47 |
| Msa0304170 | Msa0694370 | 0.805999 | 1.017898e-49 | -8.615850e-47 |
| Msa0306460 | Msa0694370 | 0.831420 | 1.686278e-55 | -8.615850e-47 |
| Msa0307540 | Msa0694370 | 0.802622 | 5.141030e-49 | -8.615850e-47 |
| Msa0309020 | Msa0694370 | 0.837649 | 4.589734e-57 | -8.615850e-47 |
| Msa0311750 | Msa0694370 | 0.810482 | 1.127730e-50 | -8.615850e-47 |
| Msa0313760 | Msa0694370 | 0.826701 | 2.348000e-54 | -8.615850e-47 |
| Msa0337900 | Msa0694370 | 0.800207 | 1.606007e-48 | -8.615850e-47 |
| Msa0342240 | Msa0694370 | 0.834312 | 3.222811e-56 | -8.615850e-47 |
| Msa0355220 | Msa0694370 | 0.835753 | 1.396709e-56 | -8.615850e-47 |
| Msa0360510 | Msa0694370 | 0.841451 | 4.714375e-58 | -8.615850e-47 |
| Msa0363300 | Msa0694370 | 0.819049 | 1.424478e-52 | -8.615850e-47 |
| Msa0485370 | Msa0694370 | 0.801817 | 7.530055e-49 | -8.615850e-47 |
| Msa0491590 | Msa0694370 | 0.858334 | 8.850223e-63 | -8.615850e-47 |
| Msa0502270 | Msa0694370 | 0.809179 | 2.150038e-50 | -8.615850e-47 |
| Msa0502340 | Msa0694370 | 0.817723 | 2.844346e-52 | -8.615850e-47 |
| Msa0502760 | Msa0694370 | 0.820099 | 8.201529e-53 | -8.615850e-47 |
| Msa0503430 | Msa0694370 | 0.809810 | 1.573925e-50 | -8.615850e-47 |
| Msa0505080 | Msa0694370 | 0.824939 | 6.149425e-54 | -8.615850e-47 |
| Msa0506270 | Msa0694370 | 0.843521 | 1.331670e-58 | -8.615850e-47 |
| Msa0532350 | Msa0694370 | 0.807527 | 4.839926e-50 | -8.615850e-47 |
| Msa0564890 | Msa0694370 | 0.833344 | 5.630016e-56 | -8.615850e-47 |
| Msa0585230 | Msa0694370 | 0.801493 | 8.771405e-49 | -8.615850e-47 |
| Msa0592680 | Msa0694370 | 0.805117 | 1.558303e-49 | -8.615850e-47 |
| Msa0596150 | Msa0694370 | 0.884141 | 2.470274e-71 | -8.615850e-47 |
| Msa0598780 | Msa0694370 | 0.832305 | 1.019677e-55 | -8.615850e-47 |
| Msa0600700 | Msa0694370 | 0.823365 | 1.440696e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0694370 | MtrunA17_Chr1g0206471 | 52.632 | 247 | 110 | 1 | 3 | 242 | 4 | 250 | 2.44e-95 | 280 |
| Msa0694370 | MtrunA17_Chr7g0270401 | 47.984 | 248 | 122 | 1 | 1 | 241 | 1 | 248 | 1.00e-85 | 256 |
| Msa0694370 | MtrunA17_Chr1g0193281 | 41.237 | 194 | 87 | 3 | 1 | 180 | 1 | 181 | 1.38e-45 | 151 |
| Msa0694370 | MtrunA17_Chr7g0228461 | 56.410 | 117 | 50 | 1 | 46 | 161 | 1 | 117 | 3.05e-40 | 136 |
| Msa0694370 | MtrunA17_Chr1g0207921 | 49.038 | 104 | 44 | 1 | 16 | 110 | 13 | 116 | 6.22e-30 | 110 |
| Msa0694370 | MtrunA17_Chr7g0234161 | 46.392 | 97 | 52 | 0 | 134 | 230 | 27 | 123 | 6.69e-23 | 90.5 |
| Msa0694370 | MtrunA17_Chr6g0473661 | 28.061 | 196 | 126 | 3 | 47 | 240 | 259 | 441 | 2.90e-20 | 89.4 |
| Msa0694370 | MtrunA17_Chr8g0359311 | 56.667 | 60 | 26 | 0 | 183 | 242 | 17 | 76 | 3.06e-18 | 77.4 |
| Msa0694370 | MtrunA17_Chr8g0361581 | 40.000 | 85 | 44 | 1 | 1 | 78 | 1 | 85 | 2.90e-17 | 76.6 |
| Msa0694370 | MtrunA17_Chr3g0123031 | 45.882 | 85 | 28 | 2 | 158 | 242 | 1 | 67 | 3.53e-17 | 74.3 |
| Msa0694370 | MtrunA17_Chr7g0237161 | 41.558 | 77 | 45 | 0 | 166 | 242 | 3 | 79 | 2.20e-14 | 66.6 |
| Msa0694370 | MtrunA17_Chr5g0421721 | 39.130 | 92 | 49 | 1 | 1 | 85 | 1 | 92 | 6.33e-14 | 65.9 |
| Msa0694370 | MtrunA17_Chr5g0423431 | 37.179 | 78 | 42 | 1 | 1 | 71 | 1 | 78 | 8.93e-14 | 65.1 |
| Msa0694370 | MtrunA17_Chr6g0473651 | 29.193 | 161 | 94 | 4 | 96 | 248 | 17 | 165 | 1.23e-13 | 69.7 |
| Msa0694370 | MtrunA17_Chr4g0054601 | 33.766 | 77 | 51 | 0 | 65 | 141 | 9 | 85 | 9.52e-13 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 68 sgRNAs with CRISPR-Local
Find 180 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAATACTTCGAAGGAATTA+TGG | 0.223973 | 4_4:+63662023 | None:intergenic |
| GTTGCGGTTTAGGACGTTTA+TGG | 0.225713 | 4_4:-63662230 | Msa0694370:intron |
| GACTTTGTTGAGATCGATTC+TGG | 0.241191 | 4_4:-63661713 | Msa0694370:CDS |
| TTGATGAATGTGGTTGTATA+TGG | 0.261102 | 4_4:-63661536 | Msa0694370:CDS |
| ACCAAAGTCGTAAGCAAAAT+TGG | 0.280462 | 4_4:+63662084 | None:intergenic |
| AGATCCTTGCTATCTGTCTT+AGG | 0.281334 | 4_4:-63661303 | None:intergenic |
| ATGCAGGATTTGGCTCATAT+TGG | 0.290632 | 4_4:-63661606 | Msa0694370:intron |
| ACATTAGTATTTGTTGGAAA+TGG | 0.291674 | 4_4:-63661914 | Msa0694370:CDS |
| ACAGGCTAAAGTTGCGGTTT+AGG | 0.323474 | 4_4:-63662240 | Msa0694370:CDS |
| TGAGATCGATTCTGGATTCT+TGG | 0.324173 | 4_4:-63661705 | Msa0694370:intron |
| TCAATATCCGTGTCAGAAAT+AGG | 0.332599 | 4_4:-63661886 | Msa0694370:CDS |
| TGGATAACATTAGTATTTGT+TGG | 0.352039 | 4_4:-63661920 | Msa0694370:CDS |
| CATTAGTATTTGTTGGAAAT+GGG | 0.358285 | 4_4:-63661913 | Msa0694370:CDS |
| ACATAATCCTATGGGTGAAA+TGG | 0.358773 | 4_4:-63662275 | Msa0694370:CDS |
| TGCAGGATTTGGCTCATATT+GGG | 0.361232 | 4_4:-63661605 | Msa0694370:intron |
| GGTCAAGGCTAGAAGGTTAA+AGG | 0.364042 | 4_4:-63661445 | Msa0694370:CDS |
| CCATAATTCCTTCGAAGTAT+TGG | 0.392246 | 4_4:-63662023 | Msa0694370:CDS |
| TGCACAAATGGCACAGGAAA+AGG | 0.399613 | 4_4:+63661776 | None:intergenic |
| CTCGCACACAATCTTCTTGC+TGG | 0.401085 | 4_4:-63662409 | Msa0694370:intron |
| CCTCATGCTCACTTTAAGAT+TGG | 0.409855 | 4_4:-63661486 | Msa0694370:CDS |
| AGATTGGCGGTGGCTGGAAC+AGG | 0.416190 | 4_4:-63661470 | Msa0694370:CDS |
| ACTTTAAGATTGGCGGTGGC+TGG | 0.418939 | 4_4:-63661476 | Msa0694370:CDS |
| ACCCTTGATACATAATCCTA+TGG | 0.427652 | 4_4:-63662284 | Msa0694370:CDS |
| TTAAATTCATTATGCACAAA+TGG | 0.431684 | 4_4:+63661764 | None:intergenic |
| CATGAGGGCGTGTAACAAAC+TGG | 0.441451 | 4_4:+63661502 | None:intergenic |
| ACAGGATGGTCAAGGCTAGA+AGG | 0.443921 | 4_4:-63661452 | Msa0694370:CDS |
| ACCCATAGGATTATGTATCA+AGG | 0.456782 | 4_4:+63662282 | None:intergenic |
| CTCCTTTCCATTTCACCCAT+AGG | 0.457517 | 4_4:+63662268 | None:intergenic |
| ACGCAATGCAAGCCAGCCTT+TGG | 0.460560 | 4_4:+63661970 | None:intergenic |
| ACTTTGGTGATAGTGTTGAT+AGG | 0.462057 | 4_4:-63662069 | Msa0694370:CDS |
| CATGCTCACTTTAAGATTGG+CGG | 0.482279 | 4_4:-63661483 | Msa0694370:CDS |
| TCAGAAATAGGTTGGGTAAG+AGG | 0.500139 | 4_4:-63661874 | Msa0694370:CDS |
| TTGCATAGGAGGTGTGAACC+TGG | 0.509205 | 4_4:+63661841 | None:intergenic |
| TGATGAATGTGGTTGTATAT+GGG | 0.515279 | 4_4:-63661535 | Msa0694370:CDS |
| TATCCGTGTCAGAAATAGGT+TGG | 0.517230 | 4_4:-63661882 | Msa0694370:CDS |
| AAATGGAAAGGAGAGCCAAC+AGG | 0.528770 | 4_4:-63662258 | Msa0694370:CDS |
| ATCCGTGTCAGAAATAGGTT+GGG | 0.528825 | 4_4:-63661881 | Msa0694370:CDS |
| ATAACGCATCACTTGGTGCA+TGG | 0.549202 | 4_4:-63661940 | Msa0694370:CDS |
| ATCCTATGGGTGAAATGGAA+AGG | 0.549546 | 4_4:-63662270 | Msa0694370:CDS |
| AAACCGCAACTTTAGCCTGT+TGG | 0.558470 | 4_4:+63662243 | None:intergenic |
| CTGAGTTTAGTTGATGAATG+TGG | 0.560055 | 4_4:-63661546 | Msa0694370:CDS |
| CCCATAGGATTATGTATCAA+GGG | 0.562530 | 4_4:+63662283 | None:intergenic |
| GCTCACTTTAAGATTGGCGG+TGG | 0.568885 | 4_4:-63661480 | Msa0694370:CDS |
| AAGAAGATTGTGTGCGAGCA+TGG | 0.571428 | 4_4:+63662414 | None:intergenic |
| TCTCTCTACCAATACTTCGA+AGG | 0.574251 | 4_4:+63662015 | None:intergenic |
| CCCTTGATACATAATCCTAT+GGG | 0.575199 | 4_4:-63662283 | Msa0694370:CDS |
| CCAATCTTAAAGTGAGCATG+AGG | 0.578221 | 4_4:+63661486 | None:intergenic |
| ATTGGTAGAGAGAAACAACC+AGG | 0.580535 | 4_4:-63662005 | Msa0694370:CDS |
| CTCTCAACAGCGAATTGCAT+AGG | 0.590485 | 4_4:+63661827 | None:intergenic |
| TAGTATTTGTTGGAAATGGG+AGG | 0.592775 | 4_4:-63661910 | Msa0694370:CDS |
| TCATTATGCACAAATGGCAC+AGG | 0.601819 | 4_4:+63661770 | None:intergenic |
| CTATGCAATTCGCTGTTGAG+AGG | 0.602851 | 4_4:-63661826 | Msa0694370:CDS |
| TGCATAGGAGGTGTGAACCT+GGG | 0.603224 | 4_4:+63661842 | None:intergenic |
| GAGCCAACAGGCTAAAGTTG+CGG | 0.603827 | 4_4:-63662246 | Msa0694370:CDS |
| AAATCCTAAGACAGATAGCA+AGG | 0.605831 | 4_4:+63661299 | None:intergenic |
| TACCCAACCTATTTCTGACA+CGG | 0.609870 | 4_4:+63661879 | None:intergenic |
| TCAACAGCGAATTGCATAGG+AGG | 0.614378 | 4_4:+63661830 | None:intergenic |
| TGTTGATAGGTATGCTACAT+TGG | 0.616810 | 4_4:-63662056 | Msa0694370:CDS |
| GTAAGAGGATACGATGTCCC+AGG | 0.623787 | 4_4:-63661859 | Msa0694370:CDS |
| AAGTCGTAAGCAAAATTGGT+TGG | 0.627128 | 4_4:+63662088 | None:intergenic |
| TGGCGGTGGCTGGAACAGGA+TGG | 0.649155 | 4_4:-63661466 | Msa0694370:CDS |
| TGATAGGTATGCTACATTGG+TGG | 0.670079 | 4_4:-63662053 | Msa0694370:CDS |
| TGGCTGGAACAGGATGGTCA+AGG | 0.676417 | 4_4:-63661460 | Msa0694370:CDS |
| AGGGCGTGTAACAAACTGGA+GGG | 0.676724 | 4_4:+63661506 | None:intergenic |
| CAATCTTAAAGTGAGCATGA+GGG | 0.680650 | 4_4:+63661487 | None:intergenic |
| AAGGCTAGAAGGTTAAAGGA+CGG | 0.693112 | 4_4:-63661441 | Msa0694370:intron |
| GAGGGCGTGTAACAAACTGG+AGG | 0.699235 | 4_4:+63661505 | None:intergenic |
| TTGGTAGAGAGAAACAACCA+GGG | 0.738238 | 4_4:-63662004 | Msa0694370:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATCAAAAATACATGTAA+GGG | + | chr4_4:63661396-63661415 | None:intergenic | 15.0% |
| !!! | TTTTTTTGTTGTTTGTTATT+AGG | - | chr4_4:63662372-63662391 | Msa0694370:intron | 15.0% |
| !! | TAAATCAAAAATACATGTAA+GGG | + | chr4_4:63661396-63661415 | None:intergenic | 15.0% |
| !!! | TTTTTTTGTTGTTTGTTATT+AGG | - | chr4_4:63662372-63662391 | Msa0694370:intron | 15.0% |
| !! | AAATCAAAAATACATGTAAG+GGG | + | chr4_4:63661395-63661414 | None:intergenic | 20.0% |
| !! | CTAAATCAAAAATACATGTA+AGG | + | chr4_4:63661397-63661416 | None:intergenic | 20.0% |
| !! | TTAAATTCATTATGCACAAA+TGG | + | chr4_4:63661979-63661998 | None:intergenic | 20.0% |
| !! | AAATCAAAAATACATGTAAG+GGG | + | chr4_4:63661395-63661414 | None:intergenic | 20.0% |
| !! | CTAAATCAAAAATACATGTA+AGG | + | chr4_4:63661397-63661416 | None:intergenic | 20.0% |
| !! | TTAAATTCATTATGCACAAA+TGG | + | chr4_4:63661979-63661998 | None:intergenic | 20.0% |
| ! | AATCAAAAATACATGTAAGG+GGG | + | chr4_4:63661394-63661413 | None:intergenic | 25.0% |
| ! | AATGACATACATATTAGATG+AGG | + | chr4_4:63661421-63661440 | None:intergenic | 25.0% |
| !!! | ACACATTTTTTTTATGTTGC+AGG | - | chr4_4:63661615-63661634 | Msa0694370:intron | 25.0% |
| !!! | CACATTTTTTTTATGTTGCA+GGG | - | chr4_4:63661616-63661635 | Msa0694370:intron | 25.0% |
| ! | TGGATAACATTAGTATTTGT+TGG | - | chr4_4:63661820-63661839 | Msa0694370:CDS | 25.0% |
| !! | ACATTAGTATTTGTTGGAAA+TGG | - | chr4_4:63661826-63661845 | Msa0694370:CDS | 25.0% |
| !! | CATTAGTATTTGTTGGAAAT+GGG | - | chr4_4:63661827-63661846 | Msa0694370:CDS | 25.0% |
| !! | TGTGTTAAAAGATATTGACT+TGG | - | chr4_4:63662067-63662086 | Msa0694370:CDS | 25.0% |
| !!! | ATATGATGTTTTGATTATGC+AGG | - | chr4_4:63662118-63662137 | Msa0694370:intron | 25.0% |
| ! | AATCAAAAATACATGTAAGG+GGG | + | chr4_4:63661394-63661413 | None:intergenic | 25.0% |
| ! | AATGACATACATATTAGATG+AGG | + | chr4_4:63661421-63661440 | None:intergenic | 25.0% |
| !!! | ACACATTTTTTTTATGTTGC+AGG | - | chr4_4:63661615-63661634 | Msa0694370:intron | 25.0% |
| !!! | CACATTTTTTTTATGTTGCA+GGG | - | chr4_4:63661616-63661635 | Msa0694370:intron | 25.0% |
| ! | TGGATAACATTAGTATTTGT+TGG | - | chr4_4:63661820-63661839 | Msa0694370:CDS | 25.0% |
| !! | ACATTAGTATTTGTTGGAAA+TGG | - | chr4_4:63661826-63661845 | Msa0694370:CDS | 25.0% |
| !! | CATTAGTATTTGTTGGAAAT+GGG | - | chr4_4:63661827-63661846 | Msa0694370:CDS | 25.0% |
| !! | TGTGTTAAAAGATATTGACT+TGG | - | chr4_4:63662067-63662086 | Msa0694370:CDS | 25.0% |
| !!! | ATATGATGTTTTGATTATGC+AGG | - | chr4_4:63662118-63662137 | Msa0694370:intron | 25.0% |
| !!! | TGTTTTGATTATGCAGGATT+TGG | - | chr4_4:63662124-63662143 | Msa0694370:intron | 30.0% |
| TTGATGAATGTGGTTGTATA+TGG | - | chr4_4:63662204-63662223 | Msa0694370:intron | 30.0% | |
| TGATGAATGTGGTTGTATAT+GGG | - | chr4_4:63662205-63662224 | Msa0694370:intron | 30.0% | |
| !!! | TGTTTTGATTATGCAGGATT+TGG | - | chr4_4:63662124-63662143 | Msa0694370:intron | 30.0% |
| TTGATGAATGTGGTTGTATA+TGG | - | chr4_4:63662204-63662223 | Msa0694370:intron | 30.0% | |
| TGATGAATGTGGTTGTATAT+GGG | - | chr4_4:63662205-63662224 | Msa0694370:intron | 30.0% | |
| ! | ATGTCATTGTTGTTCAATCC+AGG | - | chr4_4:63661433-63661452 | Msa0694370:intron | 35.0% |
| ACCCTTGATACATAATCCTA+TGG | - | chr4_4:63661456-63661475 | Msa0694370:CDS | 35.0% | |
| CCCATAGGATTATGTATCAA+GGG | + | chr4_4:63661460-63661479 | None:intergenic | 35.0% | |
| CCCTTGATACATAATCCTAT+GGG | - | chr4_4:63661457-63661476 | Msa0694370:CDS | 35.0% | |
| ACCCATAGGATTATGTATCA+AGG | + | chr4_4:63661461-63661480 | None:intergenic | 35.0% | |
| ACATAATCCTATGGGTGAAA+TGG | - | chr4_4:63661465-63661484 | Msa0694370:CDS | 35.0% | |
| ! | ACCTGCTTAATCAACGTTTT+AGG | - | chr4_4:63661582-63661601 | Msa0694370:CDS | 35.0% |
| ! | ACCTAAAACGTTGATTAAGC+AGG | + | chr4_4:63661586-63661605 | None:intergenic | 35.0% |
| AAGTCGTAAGCAAAATTGGT+TGG | + | chr4_4:63661655-63661674 | None:intergenic | 35.0% | |
| ! | ACCAATTTTGCTTACGACTT+TGG | - | chr4_4:63661655-63661674 | Msa0694370:intron | 35.0% |
| ACCAAAGTCGTAAGCAAAAT+TGG | + | chr4_4:63661659-63661678 | None:intergenic | 35.0% | |
| !! | ACTTTGGTGATAGTGTTGAT+AGG | - | chr4_4:63661671-63661690 | Msa0694370:intron | 35.0% |
| ! | TGTTGATAGGTATGCTACAT+TGG | - | chr4_4:63661684-63661703 | Msa0694370:intron | 35.0% |
| CCAATACTTCGAAGGAATTA+TGG | + | chr4_4:63661720-63661739 | None:intergenic | 35.0% | |
| CCATAATTCCTTCGAAGTAT+TGG | - | chr4_4:63661717-63661736 | Msa0694370:CDS | 35.0% | |
| CTTTGGTGAAAAATATTCCC+TGG | + | chr4_4:63661756-63661775 | None:intergenic | 35.0% | |
| ! | CAGGGAATATTTTTCACCAA+AGG | - | chr4_4:63661754-63661773 | Msa0694370:CDS | 35.0% |
| ! | GAATATTTTTCACCAAAGGC+TGG | - | chr4_4:63661758-63661777 | Msa0694370:CDS | 35.0% |
| ! | GACTTTTATAACGCATCACT+TGG | - | chr4_4:63661793-63661812 | Msa0694370:CDS | 35.0% |
| ! | TAGTATTTGTTGGAAATGGG+AGG | - | chr4_4:63661830-63661849 | Msa0694370:CDS | 35.0% |
| TCAATATCCGTGTCAGAAAT+AGG | - | chr4_4:63661854-63661873 | Msa0694370:CDS | 35.0% | |
| !! | CTGAGTTTAGTTGATGAATG+TGG | - | chr4_4:63662194-63662213 | Msa0694370:intron | 35.0% |
| CAATCTTAAAGTGAGCATGA+GGG | + | chr4_4:63662256-63662275 | None:intergenic | 35.0% | |
| TTCTCATTGACACCGATATA+TGG | + | chr4_4:63662347-63662366 | None:intergenic | 35.0% | |
| GAAACAACAAACGACAGAAA+AGG | + | chr4_4:63662415-63662434 | None:intergenic | 35.0% | |
| ! | ATGTCATTGTTGTTCAATCC+AGG | - | chr4_4:63661433-63661452 | Msa0694370:intron | 35.0% |
| ACCCTTGATACATAATCCTA+TGG | - | chr4_4:63661456-63661475 | Msa0694370:CDS | 35.0% | |
| CCCATAGGATTATGTATCAA+GGG | + | chr4_4:63661460-63661479 | None:intergenic | 35.0% | |
| CCCTTGATACATAATCCTAT+GGG | - | chr4_4:63661457-63661476 | Msa0694370:CDS | 35.0% | |
| ACCCATAGGATTATGTATCA+AGG | + | chr4_4:63661461-63661480 | None:intergenic | 35.0% | |
| ACATAATCCTATGGGTGAAA+TGG | - | chr4_4:63661465-63661484 | Msa0694370:CDS | 35.0% | |
| ! | ACCTGCTTAATCAACGTTTT+AGG | - | chr4_4:63661582-63661601 | Msa0694370:CDS | 35.0% |
| ! | ACCTAAAACGTTGATTAAGC+AGG | + | chr4_4:63661586-63661605 | None:intergenic | 35.0% |
| AAGTCGTAAGCAAAATTGGT+TGG | + | chr4_4:63661655-63661674 | None:intergenic | 35.0% | |
| ! | ACCAATTTTGCTTACGACTT+TGG | - | chr4_4:63661655-63661674 | Msa0694370:intron | 35.0% |
| ACCAAAGTCGTAAGCAAAAT+TGG | + | chr4_4:63661659-63661678 | None:intergenic | 35.0% | |
| !! | ACTTTGGTGATAGTGTTGAT+AGG | - | chr4_4:63661671-63661690 | Msa0694370:intron | 35.0% |
| ! | TGTTGATAGGTATGCTACAT+TGG | - | chr4_4:63661684-63661703 | Msa0694370:intron | 35.0% |
| CCAATACTTCGAAGGAATTA+TGG | + | chr4_4:63661720-63661739 | None:intergenic | 35.0% | |
| CCATAATTCCTTCGAAGTAT+TGG | - | chr4_4:63661717-63661736 | Msa0694370:CDS | 35.0% | |
| CTTTGGTGAAAAATATTCCC+TGG | + | chr4_4:63661756-63661775 | None:intergenic | 35.0% | |
| ! | CAGGGAATATTTTTCACCAA+AGG | - | chr4_4:63661754-63661773 | Msa0694370:CDS | 35.0% |
| ! | GAATATTTTTCACCAAAGGC+TGG | - | chr4_4:63661758-63661777 | Msa0694370:CDS | 35.0% |
| ! | GACTTTTATAACGCATCACT+TGG | - | chr4_4:63661793-63661812 | Msa0694370:CDS | 35.0% |
| ! | TAGTATTTGTTGGAAATGGG+AGG | - | chr4_4:63661830-63661849 | Msa0694370:CDS | 35.0% |
| TCAATATCCGTGTCAGAAAT+AGG | - | chr4_4:63661854-63661873 | Msa0694370:CDS | 35.0% | |
| !! | CTGAGTTTAGTTGATGAATG+TGG | - | chr4_4:63662194-63662213 | Msa0694370:intron | 35.0% |
| CAATCTTAAAGTGAGCATGA+GGG | + | chr4_4:63662256-63662275 | None:intergenic | 35.0% | |
| TTCTCATTGACACCGATATA+TGG | + | chr4_4:63662347-63662366 | None:intergenic | 35.0% | |
| GAAACAACAAACGACAGAAA+AGG | + | chr4_4:63662415-63662434 | None:intergenic | 35.0% | |
| ATCCTATGGGTGAAATGGAA+AGG | - | chr4_4:63661470-63661489 | Msa0694370:CDS | 40.0% | |
| TGATAGGTATGCTACATTGG+TGG | - | chr4_4:63661687-63661706 | Msa0694370:intron | 40.0% | |
| TCTCTCTACCAATACTTCGA+AGG | + | chr4_4:63661728-63661747 | None:intergenic | 40.0% | |
| ATTGGTAGAGAGAAACAACC+AGG | - | chr4_4:63661735-63661754 | Msa0694370:CDS | 40.0% | |
| TTGGTAGAGAGAAACAACCA+GGG | - | chr4_4:63661736-63661755 | Msa0694370:CDS | 40.0% | |
| TATCCGTGTCAGAAATAGGT+TGG | - | chr4_4:63661858-63661877 | Msa0694370:CDS | 40.0% | |
| ATCCGTGTCAGAAATAGGTT+GGG | - | chr4_4:63661859-63661878 | Msa0694370:CDS | 40.0% | |
| !! | TACCCAACCTATTTCTGACA+CGG | + | chr4_4:63661864-63661883 | None:intergenic | 40.0% |
| ! | TCAGAAATAGGTTGGGTAAG+AGG | - | chr4_4:63661866-63661885 | Msa0694370:CDS | 40.0% |
| TCATTATGCACAAATGGCAC+AGG | + | chr4_4:63661973-63661992 | None:intergenic | 40.0% | |
| ! | GACTTTGTTGAGATCGATTC+TGG | - | chr4_4:63662027-63662046 | Msa0694370:CDS | 40.0% |
| ! | TGAGATCGATTCTGGATTCT+TGG | - | chr4_4:63662035-63662054 | Msa0694370:CDS | 40.0% |
| ! | ATGCAGGATTTGGCTCATAT+TGG | - | chr4_4:63662134-63662153 | Msa0694370:intron | 40.0% |
| ! | TGCAGGATTTGGCTCATATT+GGG | - | chr4_4:63662135-63662154 | Msa0694370:intron | 40.0% |
| CCAATCTTAAAGTGAGCATG+AGG | + | chr4_4:63662257-63662276 | None:intergenic | 40.0% | |
| !! | CCTCATGCTCACTTTAAGAT+TGG | - | chr4_4:63662254-63662273 | Msa0694370:CDS | 40.0% |
| !! | CATGCTCACTTTAAGATTGG+CGG | - | chr4_4:63662257-63662276 | Msa0694370:CDS | 40.0% |
| AAGGCTAGAAGGTTAAAGGA+CGG | - | chr4_4:63662299-63662318 | Msa0694370:intron | 40.0% | |
| ! | GTTATCGGTGCTCCATATAT+CGG | - | chr4_4:63662332-63662351 | Msa0694370:intron | 40.0% |
| ATCCTATGGGTGAAATGGAA+AGG | - | chr4_4:63661470-63661489 | Msa0694370:CDS | 40.0% | |
| TGATAGGTATGCTACATTGG+TGG | - | chr4_4:63661687-63661706 | Msa0694370:intron | 40.0% | |
| TCTCTCTACCAATACTTCGA+AGG | + | chr4_4:63661728-63661747 | None:intergenic | 40.0% | |
| ATTGGTAGAGAGAAACAACC+AGG | - | chr4_4:63661735-63661754 | Msa0694370:CDS | 40.0% | |
| TTGGTAGAGAGAAACAACCA+GGG | - | chr4_4:63661736-63661755 | Msa0694370:CDS | 40.0% | |
| TATCCGTGTCAGAAATAGGT+TGG | - | chr4_4:63661858-63661877 | Msa0694370:CDS | 40.0% | |
| ATCCGTGTCAGAAATAGGTT+GGG | - | chr4_4:63661859-63661878 | Msa0694370:CDS | 40.0% | |
| !! | TACCCAACCTATTTCTGACA+CGG | + | chr4_4:63661864-63661883 | None:intergenic | 40.0% |
| ! | TCAGAAATAGGTTGGGTAAG+AGG | - | chr4_4:63661866-63661885 | Msa0694370:CDS | 40.0% |
| TCATTATGCACAAATGGCAC+AGG | + | chr4_4:63661973-63661992 | None:intergenic | 40.0% | |
| ! | GACTTTGTTGAGATCGATTC+TGG | - | chr4_4:63662027-63662046 | Msa0694370:CDS | 40.0% |
| ! | TGAGATCGATTCTGGATTCT+TGG | - | chr4_4:63662035-63662054 | Msa0694370:CDS | 40.0% |
| ! | ATGCAGGATTTGGCTCATAT+TGG | - | chr4_4:63662134-63662153 | Msa0694370:intron | 40.0% |
| ! | TGCAGGATTTGGCTCATATT+GGG | - | chr4_4:63662135-63662154 | Msa0694370:intron | 40.0% |
| CCAATCTTAAAGTGAGCATG+AGG | + | chr4_4:63662257-63662276 | None:intergenic | 40.0% | |
| !! | CCTCATGCTCACTTTAAGAT+TGG | - | chr4_4:63662254-63662273 | Msa0694370:CDS | 40.0% |
| !! | CATGCTCACTTTAAGATTGG+CGG | - | chr4_4:63662257-63662276 | Msa0694370:CDS | 40.0% |
| AAGGCTAGAAGGTTAAAGGA+CGG | - | chr4_4:63662299-63662318 | Msa0694370:intron | 40.0% | |
| ! | GTTATCGGTGCTCCATATAT+CGG | - | chr4_4:63662332-63662351 | Msa0694370:intron | 40.0% |
| AAGAAGATTGTGTGCGAGCA+TGG | + | chr4_4:63661329-63661348 | None:intergenic | 45.0% | |
| GGATTATGTATCAAGGGTCC+TGG | + | chr4_4:63661454-63661473 | None:intergenic | 45.0% | |
| CTCCTTTCCATTTCACCCAT+AGG | + | chr4_4:63661475-63661494 | None:intergenic | 45.0% | |
| AAATGGAAAGGAGAGCCAAC+AGG | - | chr4_4:63661482-63661501 | Msa0694370:CDS | 45.0% | |
| AAACCGCAACTTTAGCCTGT+TGG | + | chr4_4:63661500-63661519 | None:intergenic | 45.0% | |
| ACAGGCTAAAGTTGCGGTTT+AGG | - | chr4_4:63661500-63661519 | Msa0694370:CDS | 45.0% | |
| ! | GTTGCGGTTTAGGACGTTTA+TGG | - | chr4_4:63661510-63661529 | Msa0694370:CDS | 45.0% |
| !! | ATAACGCATCACTTGGTGCA+TGG | - | chr4_4:63661800-63661819 | Msa0694370:CDS | 45.0% |
| TCAACAGCGAATTGCATAGG+AGG | + | chr4_4:63661913-63661932 | None:intergenic | 45.0% | |
| CTCTCAACAGCGAATTGCAT+AGG | + | chr4_4:63661916-63661935 | None:intergenic | 45.0% | |
| CTATGCAATTCGCTGTTGAG+AGG | - | chr4_4:63661914-63661933 | Msa0694370:CDS | 45.0% | |
| TGCACAAATGGCACAGGAAA+AGG | + | chr4_4:63661967-63661986 | None:intergenic | 45.0% | |
| GGTCAAGGCTAGAAGGTTAA+AGG | - | chr4_4:63662295-63662314 | Msa0694370:intron | 45.0% | |
| AAGAAGATTGTGTGCGAGCA+TGG | + | chr4_4:63661329-63661348 | None:intergenic | 45.0% | |
| GGATTATGTATCAAGGGTCC+TGG | + | chr4_4:63661454-63661473 | None:intergenic | 45.0% | |
| CTCCTTTCCATTTCACCCAT+AGG | + | chr4_4:63661475-63661494 | None:intergenic | 45.0% | |
| AAATGGAAAGGAGAGCCAAC+AGG | - | chr4_4:63661482-63661501 | Msa0694370:CDS | 45.0% | |
| AAACCGCAACTTTAGCCTGT+TGG | + | chr4_4:63661500-63661519 | None:intergenic | 45.0% | |
| ACAGGCTAAAGTTGCGGTTT+AGG | - | chr4_4:63661500-63661519 | Msa0694370:CDS | 45.0% | |
| ! | GTTGCGGTTTAGGACGTTTA+TGG | - | chr4_4:63661510-63661529 | Msa0694370:CDS | 45.0% |
| !! | ATAACGCATCACTTGGTGCA+TGG | - | chr4_4:63661800-63661819 | Msa0694370:CDS | 45.0% |
| TCAACAGCGAATTGCATAGG+AGG | + | chr4_4:63661913-63661932 | None:intergenic | 45.0% | |
| CTCTCAACAGCGAATTGCAT+AGG | + | chr4_4:63661916-63661935 | None:intergenic | 45.0% | |
| CTATGCAATTCGCTGTTGAG+AGG | - | chr4_4:63661914-63661933 | Msa0694370:CDS | 45.0% | |
| TGCACAAATGGCACAGGAAA+AGG | + | chr4_4:63661967-63661986 | None:intergenic | 45.0% | |
| GGTCAAGGCTAGAAGGTTAA+AGG | - | chr4_4:63662295-63662314 | Msa0694370:intron | 45.0% | |
| CTCGCACACAATCTTCTTGC+TGG | - | chr4_4:63661331-63661350 | Msa0694370:intron | 50.0% | |
| GAGCCAACAGGCTAAAGTTG+CGG | - | chr4_4:63661494-63661513 | Msa0694370:CDS | 50.0% | |
| GTAAGAGGATACGATGTCCC+AGG | - | chr4_4:63661881-63661900 | Msa0694370:CDS | 50.0% | |
| ! | TGCATAGGAGGTGTGAACCT+GGG | + | chr4_4:63661901-63661920 | None:intergenic | 50.0% |
| ! | TTGCATAGGAGGTGTGAACC+TGG | + | chr4_4:63661902-63661921 | None:intergenic | 50.0% |
| AGGGCGTGTAACAAACTGGA+GGG | + | chr4_4:63662237-63662256 | None:intergenic | 50.0% | |
| ! | CATGAGGGCGTGTAACAAAC+TGG | + | chr4_4:63662241-63662260 | None:intergenic | 50.0% |
| !! | GCTCACTTTAAGATTGGCGG+TGG | - | chr4_4:63662260-63662279 | Msa0694370:CDS | 50.0% |
| !! | ACTTTAAGATTGGCGGTGGC+TGG | - | chr4_4:63662264-63662283 | Msa0694370:CDS | 50.0% |
| ACAGGATGGTCAAGGCTAGA+AGG | - | chr4_4:63662288-63662307 | Msa0694370:CDS | 50.0% | |
| ! | GACGGTGACAGTGTCGTTAT+CGG | - | chr4_4:63662317-63662336 | Msa0694370:intron | 50.0% |
| CTCGCACACAATCTTCTTGC+TGG | - | chr4_4:63661331-63661350 | Msa0694370:intron | 50.0% | |
| GAGCCAACAGGCTAAAGTTG+CGG | - | chr4_4:63661494-63661513 | Msa0694370:CDS | 50.0% | |
| GTAAGAGGATACGATGTCCC+AGG | - | chr4_4:63661881-63661900 | Msa0694370:CDS | 50.0% | |
| ! | TGCATAGGAGGTGTGAACCT+GGG | + | chr4_4:63661901-63661920 | None:intergenic | 50.0% |
| ! | TTGCATAGGAGGTGTGAACC+TGG | + | chr4_4:63661902-63661921 | None:intergenic | 50.0% |
| AGGGCGTGTAACAAACTGGA+GGG | + | chr4_4:63662237-63662256 | None:intergenic | 50.0% | |
| ! | CATGAGGGCGTGTAACAAAC+TGG | + | chr4_4:63662241-63662260 | None:intergenic | 50.0% |
| !! | GCTCACTTTAAGATTGGCGG+TGG | - | chr4_4:63662260-63662279 | Msa0694370:CDS | 50.0% |
| !! | ACTTTAAGATTGGCGGTGGC+TGG | - | chr4_4:63662264-63662283 | Msa0694370:CDS | 50.0% |
| ACAGGATGGTCAAGGCTAGA+AGG | - | chr4_4:63662288-63662307 | Msa0694370:CDS | 50.0% | |
| ! | GACGGTGACAGTGTCGTTAT+CGG | - | chr4_4:63662317-63662336 | Msa0694370:intron | 50.0% |
| ACGCAATGCAAGCCAGCCTT+TGG | + | chr4_4:63661773-63661792 | None:intergenic | 55.0% | |
| ! | GAGGGCGTGTAACAAACTGG+AGG | + | chr4_4:63662238-63662257 | None:intergenic | 55.0% |
| TGGCTGGAACAGGATGGTCA+AGG | - | chr4_4:63662280-63662299 | Msa0694370:CDS | 55.0% | |
| ACGCAATGCAAGCCAGCCTT+TGG | + | chr4_4:63661773-63661792 | None:intergenic | 55.0% | |
| ! | GAGGGCGTGTAACAAACTGG+AGG | + | chr4_4:63662238-63662257 | None:intergenic | 55.0% |
| TGGCTGGAACAGGATGGTCA+AGG | - | chr4_4:63662280-63662299 | Msa0694370:CDS | 55.0% | |
| AGATTGGCGGTGGCTGGAAC+AGG | - | chr4_4:63662270-63662289 | Msa0694370:CDS | 60.0% | |
| AGATTGGCGGTGGCTGGAAC+AGG | - | chr4_4:63662270-63662289 | Msa0694370:CDS | 60.0% | |
| TGGCGGTGGCTGGAACAGGA+TGG | - | chr4_4:63662274-63662293 | Msa0694370:CDS | 65.0% | |
| TGGCGGTGGCTGGAACAGGA+TGG | - | chr4_4:63662274-63662293 | Msa0694370:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 63661304 | 63662458 | 63661304 | ID=Msa0694370;Name=Msa0694370 |
| chr4_4 | mRNA | 63661304 | 63662458 | 63661304 | ID=Msa0694370-mRNA-1;Parent=Msa0694370;Name=Msa0694370-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|0|0|0.4|1|1|5|0|248 |
| chr4_4 | exon | 63662410 | 63662458 | 63662410 | ID=Msa0694370-mRNA-1:exon:18023;Parent=Msa0694370-mRNA-1 |
| chr4_4 | exon | 63662231 | 63662307 | 63662231 | ID=Msa0694370-mRNA-1:exon:18022;Parent=Msa0694370-mRNA-1 |
| chr4_4 | exon | 63661706 | 63662125 | 63661706 | ID=Msa0694370-mRNA-1:exon:18021;Parent=Msa0694370-mRNA-1 |
| chr4_4 | exon | 63661442 | 63661622 | 63661442 | ID=Msa0694370-mRNA-1:exon:18020;Parent=Msa0694370-mRNA-1 |
| chr4_4 | exon | 63661304 | 63661323 | 63661304 | ID=Msa0694370-mRNA-1:exon:18019;Parent=Msa0694370-mRNA-1 |
| chr4_4 | CDS | 63662410 | 63662458 | 63662410 | ID=Msa0694370-mRNA-1:cds;Parent=Msa0694370-mRNA-1 |
| chr4_4 | CDS | 63662231 | 63662307 | 63662231 | ID=Msa0694370-mRNA-1:cds;Parent=Msa0694370-mRNA-1 |
| chr4_4 | CDS | 63661706 | 63662125 | 63661706 | ID=Msa0694370-mRNA-1:cds;Parent=Msa0694370-mRNA-1 |
| chr4_4 | CDS | 63661442 | 63661622 | 63661442 | ID=Msa0694370-mRNA-1:cds;Parent=Msa0694370-mRNA-1 |
| chr4_4 | CDS | 63661304 | 63661323 | 63661304 | ID=Msa0694370-mRNA-1:cds;Parent=Msa0694370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
