Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
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Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0013750 | Msa0846210 | 0.814257 | 1.689520e-51 | -8.615850e-47 |
Msa0016570 | Msa0846210 | 0.819438 | 1.161279e-52 | -8.615850e-47 |
Msa0016580 | Msa0846210 | 0.822358 | 2.472087e-53 | -8.615850e-47 |
Msa0102070 | Msa0846210 | 0.862083 | 6.513453e-64 | -8.615850e-47 |
Msa0110270 | Msa0846210 | 0.827961 | 1.171415e-54 | -8.615850e-47 |
Msa0604350 | Msa0846210 | 0.826991 | 2.001601e-54 | -8.615850e-47 |
Msa0636170 | Msa0846210 | 0.834450 | 2.975686e-56 | -8.615850e-47 |
Msa0639610 | Msa0846210 | 0.808640 | 2.804589e-50 | -8.615850e-47 |
Msa0678930 | Msa0846210 | 0.832722 | 8.036313e-56 | -8.615850e-47 |
Msa0688270 | Msa0846210 | 0.814351 | 1.610532e-51 | -8.615850e-47 |
Msa0694370 | Msa0846210 | 0.886478 | 3.302855e-72 | -8.615850e-47 |
Msa0726140 | Msa0846210 | 0.849087 | 4.049466e-60 | -8.615850e-47 |
Msa0729800 | Msa0846210 | 0.839849 | 1.238693e-57 | -8.615850e-47 |
Msa0733290 | Msa0846210 | 0.843720 | 1.177939e-58 | -8.615850e-47 |
Msa0743810 | Msa0846210 | 0.871227 | 8.023942e-67 | -8.615850e-47 |
Msa0745060 | Msa0846210 | 0.831736 | 1.409853e-55 | -8.615850e-47 |
Msa0766630 | Msa0846210 | 0.816300 | 5.937318e-52 | -8.615850e-47 |
Msa0767720 | Msa0846210 | 0.826788 | 2.238566e-54 | -8.615850e-47 |
Msa0783160 | Msa0846210 | 0.871837 | 5.041410e-67 | -8.615850e-47 |
Msa0787600 | Msa0846210 | 0.835255 | 1.866656e-56 | -8.615850e-47 |
Msa0808010 | Msa0846210 | 0.881387 | 2.504528e-70 | -8.615850e-47 |
Msa0808020 | Msa0846210 | 0.871270 | 7.768043e-67 | -8.615850e-47 |
Msa0810540 | Msa0846210 | 0.802065 | 6.693829e-49 | -8.615850e-47 |
Msa0824600 | Msa0846210 | 0.821040 | 4.987085e-53 | -8.615850e-47 |
Msa0825860 | Msa0846210 | 0.841127 | 5.735308e-58 | -8.615850e-47 |
Msa0833290 | Msa0846210 | 0.829963 | 3.834786e-55 | -8.615850e-47 |
Msa0833300 | Msa0846210 | 0.805063 | 1.599329e-49 | -8.615850e-47 |
Msa0142220 | Msa0846210 | 0.834724 | 2.539512e-56 | -8.615850e-47 |
Msa0145750 | Msa0846210 | 0.811127 | 8.177201e-51 | -8.615850e-47 |
Msa0153910 | Msa0846210 | 0.808398 | 3.158753e-50 | -8.615850e-47 |
Msa0188460 | Msa0846210 | 0.843982 | 1.002352e-58 | -8.615850e-47 |
Msa0200000 | Msa0846210 | 0.829256 | 5.700472e-55 | -8.615850e-47 |
Msa0208090 | Msa0846210 | 0.803258 | 3.798020e-49 | -8.615850e-47 |
Msa0227480 | Msa0846210 | 0.823654 | 1.233154e-53 | -8.615850e-47 |
Msa0231000 | Msa0846210 | 0.816401 | 5.636067e-52 | -8.615850e-47 |
Msa0232850 | Msa0846210 | 0.848436 | 6.138347e-60 | -8.615850e-47 |
Msa0365500 | Msa0846210 | 0.849928 | 2.359763e-60 | -8.615850e-47 |
Msa0369730 | Msa0846210 | 0.801569 | 8.464607e-49 | -8.615850e-47 |
Msa0375870 | Msa0846210 | 0.802900 | 4.505368e-49 | -8.615850e-47 |
Msa0379940 | Msa0846210 | 0.800902 | 1.158813e-48 | -8.615850e-47 |
Msa0384800 | Msa0846210 | 0.832733 | 7.985865e-56 | -8.615850e-47 |
Msa0384890 | Msa0846210 | 0.845352 | 4.285293e-59 | -8.615850e-47 |
Msa0394970 | Msa0846210 | 0.848981 | 4.332895e-60 | -8.615850e-47 |
Msa0402290 | Msa0846210 | 0.811903 | 5.545302e-51 | -8.615850e-47 |
Msa0414410 | Msa0846210 | 0.850528 | 1.602057e-60 | -8.615850e-47 |
Msa0414420 | Msa0846210 | 0.854360 | 1.296724e-61 | -8.615850e-47 |
Msa0424550 | Msa0846210 | 0.806213 | 9.176841e-50 | -8.615850e-47 |
Msa0435230 | Msa0846210 | 0.837614 | 4.684282e-57 | -8.615850e-47 |
Msa0436780 | Msa0846210 | 0.823830 | 1.121385e-53 | -8.615850e-47 |
Msa0438620 | Msa0846210 | 0.815203 | 1.042695e-51 | -8.615850e-47 |
Msa0444130 | Msa0846210 | 0.806014 | 1.010216e-49 | -8.615850e-47 |
Msa0450000 | Msa0846210 | 0.840171 | 1.020774e-57 | -8.615850e-47 |
Msa0450570 | Msa0846210 | 0.826892 | 2.113780e-54 | -8.615850e-47 |
Msa0452900 | Msa0846210 | 0.865571 | 5.362315e-65 | -8.615850e-47 |
Msa0453120 | Msa0846210 | 0.824144 | 9.465399e-54 | -8.615850e-47 |
Msa0454910 | Msa0846210 | 0.823838 | 1.116577e-53 | -8.615850e-47 |
Msa0459160 | Msa0846210 | 0.811126 | 8.181598e-51 | -8.615850e-47 |
Msa0471380 | Msa0846210 | 0.816099 | 6.586196e-52 | -8.615850e-47 |
Msa0479340 | Msa0846210 | 0.852103 | 5.748688e-61 | -8.615850e-47 |
Msa0267000 | Msa0846210 | 0.849971 | 2.294953e-60 | -8.615850e-47 |
Msa0267010 | Msa0846210 | 0.855680 | 5.363600e-62 | -8.615850e-47 |
Msa0270520 | Msa0846210 | 0.863375 | 2.604367e-64 | -8.615850e-47 |
Msa0306460 | Msa0846210 | 0.811069 | 8.417467e-51 | -8.615850e-47 |
Msa0309020 | Msa0846210 | 0.845158 | 4.833655e-59 | -8.615850e-47 |
Msa0313760 | Msa0846210 | 0.831984 | 1.224636e-55 | -8.615850e-47 |
Msa0342240 | Msa0846210 | 0.841931 | 3.521124e-58 | -8.615850e-47 |
Msa0355220 | Msa0846210 | 0.813336 | 2.694862e-51 | -8.615850e-47 |
Msa0360510 | Msa0846210 | 0.862969 | 3.477986e-64 | -8.615850e-47 |
Msa0363300 | Msa0846210 | 0.833117 | 6.412611e-56 | -8.615850e-47 |
Msa0491590 | Msa0846210 | 0.833090 | 6.513083e-56 | -8.615850e-47 |
Msa0502270 | Msa0846210 | 0.800748 | 1.246291e-48 | -8.615850e-47 |
Msa0502340 | Msa0846210 | 0.800181 | 1.625838e-48 | -8.615850e-47 |
Msa0502760 | Msa0846210 | 0.817980 | 2.488392e-52 | -8.615850e-47 |
Msa0503430 | Msa0846210 | 0.845555 | 3.775545e-59 | -8.615850e-47 |
Msa0505080 | Msa0846210 | 0.809206 | 2.121792e-50 | -8.615850e-47 |
Msa0506270 | Msa0846210 | 0.810202 | 1.295711e-50 | -8.615850e-47 |
Msa0534540 | Msa0846210 | 0.807316 | 5.364958e-50 | -8.615850e-47 |
Msa0564890 | Msa0846210 | 0.833831 | 4.254693e-56 | -8.615850e-47 |
Msa0596150 | Msa0846210 | 0.882059 | 1.430840e-70 | -8.615850e-47 |
Msa0598780 | Msa0846210 | 0.834147 | 3.546714e-56 | -8.615850e-47 |
Msa0846210 | Msa0846330 | 0.823118 | 1.645157e-53 | -8.615850e-47 |
Msa0846210 | Msa0846350 | 0.831851 | 1.320751e-55 | -8.615850e-47 |
Msa0846210 | Msa0848960 | 0.845799 | 3.242262e-59 | -8.615850e-47 |
Msa0846210 | Msa0854980 | 0.813746 | 2.189772e-51 | -8.615850e-47 |
Msa0846210 | Msa0858980 | 0.836809 | 7.526199e-57 | -8.615850e-47 |
Msa0846210 | Msa0865320 | 0.823658 | 1.230160e-53 | -8.615850e-47 |
Msa0846210 | Msa0885280 | 0.805154 | 1.530799e-49 | -8.615850e-47 |
Msa0846210 | Msa0885290 | 0.822840 | 1.909981e-53 | -8.615850e-47 |
Msa0846210 | Msa0887920 | 0.813058 | 3.101068e-51 | -8.615850e-47 |
Msa0846210 | Msa0888370 | 0.844142 | 9.080479e-59 | -8.615850e-47 |
Msa0846210 | Msa0889850 | 0.806850 | 6.733080e-50 | -8.615850e-47 |
Msa0846210 | Msa0896080 | 0.812101 | 5.021663e-51 | -8.615850e-47 |
Msa0846210 | Msa0899600 | 0.838602 | 2.608670e-57 | -8.615850e-47 |
Msa0846210 | Msa0907260 | 0.837867 | 4.035282e-57 | -8.615850e-47 |
Msa0846210 | Msa0935910 | 0.802873 | 4.561702e-49 | -8.615850e-47 |
Msa0846210 | Msa0943920 | 0.801839 | 7.449518e-49 | -8.615850e-47 |
Msa0846210 | Msa0952190 | 0.807576 | 4.725505e-50 | -8.615850e-47 |
Msa0846210 | Msa0952350 | 0.808611 | 2.844077e-50 | -8.615850e-47 |
Msa0846210 | Msa0954910 | 0.828471 | 8.828167e-55 | -8.615850e-47 |
Msa0846210 | Msa0956270 | 0.832348 | 9.951402e-56 | -8.615850e-47 |
Msa0846210 | Msa0957860 | 0.802289 | 6.020239e-49 | -8.615850e-47 |
Msa0846210 | Msa0957960 | 0.803063 | 4.169195e-49 | -8.615850e-47 |
Msa0846210 | Msa0979410 | 0.824524 | 7.702903e-54 | -8.615850e-47 |
Msa0846210 | Msa0981370 | 0.804033 | 2.622998e-49 | -8.615850e-47 |
Msa0846210 | Msa0989060 | 0.857342 | 1.742403e-62 | -8.615850e-47 |
Msa0846210 | Msa0998690 | 0.814165 | 1.770141e-51 | -8.615850e-47 |
Msa0846210 | Msa1015950 | 0.811725 | 6.063204e-51 | -8.615850e-47 |
Msa0846210 | Msa1016280 | 0.835415 | 1.700288e-56 | -8.615850e-47 |
Msa0846210 | Msa1023050 | 0.819604 | 1.064570e-52 | -8.615850e-47 |
Msa0846210 | Msa1025360 | 0.861939 | 7.212931e-64 | -8.615850e-47 |
Msa0846210 | Msa1025370 | 0.858457 | 8.128989e-63 | -8.615850e-47 |
Msa0846210 | Msa1044830 | 0.860555 | 1.904241e-63 | -8.615850e-47 |
Msa0846210 | Msa1044840 | 0.861486 | 9.917513e-64 | -8.615850e-47 |
Msa0846210 | Msa1065570 | 0.835260 | 1.860509e-56 | -8.615850e-47 |
Msa0846210 | Msa1092990 | 0.849096 | 4.025225e-60 | -8.615850e-47 |
Msa0846210 | Msa1099970 | 0.810519 | 1.107066e-50 | -8.615850e-47 |
Msa0846210 | Msa1100980 | 0.877507 | 5.946806e-69 | -8.615850e-47 |
Msa0846210 | Msa1109440 | 0.827358 | 1.635489e-54 | -8.615850e-47 |
Msa0846210 | Msa1111150 | 0.838997 | 2.061607e-57 | -8.615850e-47 |
Msa0846210 | Msa1121200 | 0.824660 | 7.156108e-54 | -8.615850e-47 |
Msa0846210 | Msa1121480 | 0.815488 | 9.012874e-52 | -8.615850e-47 |
Msa0846210 | Msa1121490 | 0.819940 | 8.917966e-53 | -8.615850e-47 |
Msa0846210 | Msa1135740 | 0.856384 | 3.337474e-62 | -8.615850e-47 |
Msa0846210 | Msa1136090 | 0.832672 | 8.272014e-56 | -8.615850e-47 |
Msa0846210 | Msa1146110 | 0.827049 | 1.938689e-54 | -8.615850e-47 |
Msa0846210 | Msa1150370 | 0.817455 | 3.268297e-52 | -8.615850e-47 |
Msa0846210 | Msa1173920 | 0.800875 | 1.173934e-48 | -8.615850e-47 |
Msa0846210 | Msa1184420 | 0.810345 | 1.207159e-50 | -8.615850e-47 |
Msa0846210 | Msa1187940 | 0.834196 | 3.446404e-56 | -8.615850e-47 |
Msa0846210 | Msa1187950 | 0.851133 | 1.081958e-60 | -8.615850e-47 |
Msa0846210 | Msa1192640 | 0.870236 | 1.699156e-66 | -8.615850e-47 |
Msa0846210 | Msa1246880 | 0.823626 | 1.251496e-53 | -8.615850e-47 |
Msa0846210 | Msa1248310 | 0.800064 | 1.717295e-48 | -8.615850e-47 |
Msa0846210 | Msa1260100 | 0.816443 | 5.515855e-52 | -8.615850e-47 |
Msa0846210 | Msa1269670 | 0.830373 | 3.045359e-55 | -8.615850e-47 |
Msa0846210 | Msa1270230 | 0.834707 | 2.565305e-56 | -8.615850e-47 |
Msa0846210 | Msa1270240 | 0.844643 | 6.656211e-59 | -8.615850e-47 |
Msa0846210 | Msa1270270 | 0.826209 | 3.075184e-54 | -8.615850e-47 |
Msa0846210 | Msa1283330 | 0.828375 | 9.309621e-55 | -8.615850e-47 |
Msa0846210 | Msa1285930 | 0.889492 | 2.306923e-73 | -8.615850e-47 |
Msa0846210 | Msa1287800 | 0.858275 | 9.210441e-63 | -8.615850e-47 |
Msa0846210 | Msa1287810 | 0.865337 | 6.353083e-65 | -8.615850e-47 |
Msa0846210 | Msa1287830 | 0.804299 | 2.309233e-49 | -8.615850e-47 |
Msa0846210 | Msa1289430 | 0.818271 | 2.138300e-52 | -8.615850e-47 |
Msa0846210 | Msa1297210 | 0.815964 | 7.056772e-52 | -8.615850e-47 |
Msa0846210 | Msa1307890 | 0.808651 | 2.789559e-50 | -8.615850e-47 |
Msa0846210 | Msa1320300 | 0.824851 | 6.451339e-54 | -8.615850e-47 |
Msa0846210 | Msa1340590 | 0.842990 | 1.844903e-58 | -8.615850e-47 |
Msa0846210 | Msa1342200 | 0.811845 | 5.709254e-51 | -8.615850e-47 |
Msa0846210 | Msa1344520 | 0.837581 | 4.775806e-57 | -8.615850e-47 |
Msa0846210 | Msa1382690 | 0.801010 | 1.101370e-48 | -8.615850e-47 |
Msa0846210 | Msa1382700 | 0.816842 | 4.489999e-52 | -8.615850e-47 |
Msa0846210 | Msa1386330 | 0.800018 | 1.754990e-48 | -8.615850e-47 |
Msa0846210 | Msa1397580 | 0.844939 | 5.541076e-59 | -8.615850e-47 |
Msa0846210 | Msa1397860 | 0.818524 | 1.874470e-52 | -8.615850e-47 |
Msa0846210 | Msa1402790 | 0.810007 | 1.427816e-50 | -8.615850e-47 |
Msa0846210 | Msa1402930 | 0.804199 | 2.422588e-49 | -8.615850e-47 |
Msa0846210 | Msa1404000 | 0.850513 | 1.618026e-60 | -8.615850e-47 |
Msa0846210 | Msa1415310 | 0.827183 | 1.800366e-54 | -8.615850e-47 |
Msa0846210 | Msa1422180 | 0.880340 | 5.949193e-70 | -8.615850e-47 |
Msa0846210 | Msa1433120 | 0.828759 | 7.518891e-55 | -8.615850e-47 |
Msa0846210 | Msa1451190 | 0.825678 | 4.111470e-54 | -8.615850e-47 |
Msa0846210 | Msa1451570 | 0.822581 | 2.194068e-53 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0846210 | MtrunA17_Chr5g0399611 | 76.471 | 34 | 8 | 0 | 53 | 86 | 299 | 332 | 7.39e-12 | 60.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 44 sgRNAs with CRISPR-Local
Find 199 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGTTGTTATACCCTCATTT+TGG | 0.158518 | 5_4:+25856823 | Msa0846210:three_prime_UTR |
TATTGTAGCCGCTCTTTAAT+TGG | 0.232426 | 5_4:+25856751 | Msa0846210:three_prime_UTR |
AAACAGAAGACGATGTGATA+TGG | 0.312038 | 5_4:-25855434 | None:intergenic |
CTGTTTGATTTGATCTTTAG+TGG | 0.319870 | 5_4:+25855451 | Msa0846210:CDS |
AGCTTACCCTTCTATCTTCC+AGG | 0.320309 | 5_4:-25856515 | None:intergenic |
TAACCGAATCATGATGGATT+TGG | 0.357701 | 5_4:-25855309 | None:intergenic |
TTGCTAACCTGGAAGATAGA+AGG | 0.399917 | 5_4:+25856508 | Msa0846210:CDS |
CCATCGTAATAACCGTCTTC+AGG | 0.404143 | 5_4:+25855589 | Msa0846210:CDS |
TTGGAGTGGTAGGCACAAAT+TGG | 0.412153 | 5_4:+25856770 | Msa0846210:three_prime_UTR |
ATGGATTTGGTTGCTGCATC+AGG | 0.425079 | 5_4:-25855296 | None:intergenic |
GAGGGTGAGAAGGTTCTAAA+GGG | 0.446500 | 5_4:+25855243 | Msa0846210:five_prime_UTR |
AGAGGGTGAGAAGGTTCTAA+AGG | 0.453878 | 5_4:+25855242 | Msa0846210:five_prime_UTR |
CATAGAGCCTTTACATGTGC+CGG | 0.472967 | 5_4:+25855549 | Msa0846210:intron |
TAACACTTGTTCCAGTGTCA+TGG | 0.475284 | 5_4:-25856448 | None:intergenic |
ACTCATGCCGGCACATGTAA+AGG | 0.475614 | 5_4:-25855556 | None:intergenic |
TTTCCATTGTTATTGTCTCC+AGG | 0.476783 | 5_4:+25855486 | Msa0846210:CDS |
AACAATCTTGAATAGTAGAT+AGG | 0.481422 | 5_4:+25856728 | Msa0846210:three_prime_UTR |
AACACTTGTTCCAGTGTCAT+GGG | 0.487789 | 5_4:-25856447 | None:intergenic |
ACTTGCAGTTTACTGATAAG+TGG | 0.491989 | 5_4:+25856654 | Msa0846210:three_prime_UTR |
TGATGATGGAGTTGCTAACC+TGG | 0.496868 | 5_4:+25856497 | Msa0846210:CDS |
CAGTTTACTGATAAGTGGGC+AGG | 0.496917 | 5_4:+25856659 | Msa0846210:three_prime_UTR |
AACAGAAGACGATGTGATAT+GGG | 0.506013 | 5_4:-25855433 | None:intergenic |
CAACCAAATCCATCATGATT+CGG | 0.506042 | 5_4:+25855306 | Msa0846210:exon |
GAATACTAACCGAATCATGA+TGG | 0.524672 | 5_4:-25855315 | None:intergenic |
TAAGAACAGAGAGGGTGAGA+AGG | 0.532550 | 5_4:+25855233 | Msa0846210:five_prime_UTR |
CAATTTCGTCTTCGTTATCA+CGG | 0.532588 | 5_4:-25856476 | None:intergenic |
AACGAAGACGAAATTGATGA+TGG | 0.533326 | 5_4:+25856483 | Msa0846210:CDS |
TTTGATTTGATCTTTAGTGG+TGG | 0.547432 | 5_4:+25855454 | Msa0846210:CDS |
AAGAAGATTAAGAACAGAGA+GGG | 0.547991 | 5_4:+25855225 | Msa0846210:five_prime_UTR |
CGCTCTTTAATTGGAGTGGT+AGG | 0.554406 | 5_4:+25856760 | Msa0846210:three_prime_UTR |
TTGATTTGATCTTTAGTGGT+GGG | 0.556033 | 5_4:+25855455 | Msa0846210:CDS |
CTTGCAGTTTACTGATAAGT+GGG | 0.559276 | 5_4:+25856655 | Msa0846210:three_prime_UTR |
TGCTAACCTGGAAGATAGAA+GGG | 0.563120 | 5_4:+25856509 | Msa0846210:CDS |
AGGGTGAGAAGGTTCTAAAG+GGG | 0.575073 | 5_4:+25855244 | Msa0846210:five_prime_UTR |
TAGCCGCTCTTTAATTGGAG+TGG | 0.592376 | 5_4:+25856756 | Msa0846210:three_prime_UTR |
GTTGATGAAGCCCATGACAC+TGG | 0.608770 | 5_4:+25856437 | Msa0846210:intron |
CCTGAAGACGGTTATTACGA+TGG | 0.646498 | 5_4:-25855589 | None:intergenic |
GGATAATCTGAAACTCATGC+CGG | 0.650370 | 5_4:-25855568 | None:intergenic |
ACTAAGTAAGTACCTGAAGA+CGG | 0.658147 | 5_4:-25855601 | None:intergenic |
GTAGAATGAACATGGACATG+TGG | 0.668399 | 5_4:+25856626 | Msa0846210:three_prime_UTR |
AAAGAAGATTAAGAACAGAG+AGG | 0.671740 | 5_4:+25855224 | Msa0846210:five_prime_UTR |
GTACCTGGAGACAATAACAA+TGG | 0.672525 | 5_4:-25855489 | None:intergenic |
TAGAATGAACATGGACATGT+GGG | 0.679383 | 5_4:+25856627 | Msa0846210:three_prime_UTR |
CTACCACTCCAATTAAAGAG+CGG | 0.685540 | 5_4:-25856759 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTAATATTAAATCCATTTA+TGG | - | chr5_4:25856122-25856141 | None:intergenic | 10.0% |
!! | TTTAATATTAAATCCATTTA+TGG | - | chr5_4:25856122-25856141 | None:intergenic | 10.0% |
!!! | AAATTTGAGATTTTCATATT+GGG | - | chr5_4:25855407-25855426 | None:intergenic | 15.0% |
!!! | ATAAAATTTCTAAAAGCTAA+TGG | - | chr5_4:25856215-25856234 | None:intergenic | 15.0% |
!! | AGGATTAATTAGATAATATA+TGG | + | chr5_4:25856308-25856327 | Msa0846210:intron | 15.0% |
!!! | AAATTTGAGATTTTCATATT+GGG | - | chr5_4:25855407-25855426 | None:intergenic | 15.0% |
!!! | ATAAAATTTCTAAAAGCTAA+TGG | - | chr5_4:25856215-25856234 | None:intergenic | 15.0% |
!! | AGGATTAATTAGATAATATA+TGG | + | chr5_4:25856308-25856327 | Msa0846210:intron | 15.0% |
!!! | AATTTGAGATTTTCATATTG+GGG | - | chr5_4:25855406-25855425 | None:intergenic | 20.0% |
!!! | GAAATTTGAGATTTTCATAT+TGG | - | chr5_4:25855408-25855427 | None:intergenic | 20.0% |
!! | GATTGAAAACAAAACAAAAA+AGG | - | chr5_4:25855828-25855847 | None:intergenic | 20.0% |
!! | ATAATGGTAATTAGAAAATG+AGG | - | chr5_4:25856153-25856172 | None:intergenic | 20.0% |
!!! | TCATTTTCTAATTACCATTA+TGG | + | chr5_4:25856152-25856171 | Msa0846210:intron | 20.0% |
!! | CTAATGGTAATTACAAAATA+TGG | - | chr5_4:25856199-25856218 | None:intergenic | 20.0% |
!!! | AGAAATGAGTTAGTATTTTT+AGG | - | chr5_4:25856850-25856869 | None:intergenic | 20.0% |
!!! | AATTTGAGATTTTCATATTG+GGG | - | chr5_4:25855406-25855425 | None:intergenic | 20.0% |
!!! | GAAATTTGAGATTTTCATAT+TGG | - | chr5_4:25855408-25855427 | None:intergenic | 20.0% |
!! | GATTGAAAACAAAACAAAAA+AGG | - | chr5_4:25855828-25855847 | None:intergenic | 20.0% |
!! | ATAATGGTAATTAGAAAATG+AGG | - | chr5_4:25856153-25856172 | None:intergenic | 20.0% |
!!! | TCATTTTCTAATTACCATTA+TGG | + | chr5_4:25856152-25856171 | Msa0846210:intron | 20.0% |
!! | CTAATGGTAATTACAAAATA+TGG | - | chr5_4:25856199-25856218 | None:intergenic | 20.0% |
!!! | AGAAATGAGTTAGTATTTTT+AGG | - | chr5_4:25856850-25856869 | None:intergenic | 20.0% |
! | TTCACGTGATTACATTTAAA+AGG | - | chr5_4:25855770-25855789 | None:intergenic | 25.0% |
! | GAAAACAAAACAAAAAAGGA+TGG | - | chr5_4:25855824-25855843 | None:intergenic | 25.0% |
! | TTGACAAAAATGAGTATATC+AGG | - | chr5_4:25855860-25855879 | None:intergenic | 25.0% |
! | GTCTAGTATTAAATCCATAA+TGG | - | chr5_4:25856169-25856188 | None:intergenic | 25.0% |
! | ATGACAATCTGCAAATTATA+TGG | - | chr5_4:25856341-25856360 | None:intergenic | 25.0% |
!!! | CAAATTCTGTTTTTCTTCTT+TGG | + | chr5_4:25856549-25856568 | Msa0846210:CDS | 25.0% |
!!! | AGATTTTAGATTGTTACTTC+TGG | + | chr5_4:25856594-25856613 | Msa0846210:exon | 25.0% |
!!! | GATTTTAGATTGTTACTTCT+GGG | + | chr5_4:25856595-25856614 | Msa0846210:exon | 25.0% |
! | AACAATCTTGAATAGTAGAT+AGG | + | chr5_4:25856728-25856747 | Msa0846210:three_prime_UTR | 25.0% |
!!! | TATTTTTAGGTCCAAAATGA+GGG | - | chr5_4:25856837-25856856 | None:intergenic | 25.0% |
! | TTCACGTGATTACATTTAAA+AGG | - | chr5_4:25855770-25855789 | None:intergenic | 25.0% |
! | GAAAACAAAACAAAAAAGGA+TGG | - | chr5_4:25855824-25855843 | None:intergenic | 25.0% |
! | TTGACAAAAATGAGTATATC+AGG | - | chr5_4:25855860-25855879 | None:intergenic | 25.0% |
! | GTCTAGTATTAAATCCATAA+TGG | - | chr5_4:25856169-25856188 | None:intergenic | 25.0% |
! | ATGACAATCTGCAAATTATA+TGG | - | chr5_4:25856341-25856360 | None:intergenic | 25.0% |
!!! | CAAATTCTGTTTTTCTTCTT+TGG | + | chr5_4:25856549-25856568 | Msa0846210:CDS | 25.0% |
!!! | AGATTTTAGATTGTTACTTC+TGG | + | chr5_4:25856594-25856613 | Msa0846210:exon | 25.0% |
!!! | GATTTTAGATTGTTACTTCT+GGG | + | chr5_4:25856595-25856614 | Msa0846210:exon | 25.0% |
! | AACAATCTTGAATAGTAGAT+AGG | + | chr5_4:25856728-25856747 | Msa0846210:three_prime_UTR | 25.0% |
!!! | TATTTTTAGGTCCAAAATGA+GGG | - | chr5_4:25856837-25856856 | None:intergenic | 25.0% |
AAAGAAGATTAAGAACAGAG+AGG | + | chr5_4:25855224-25855243 | Msa0846210:five_prime_UTR | 30.0% | |
AAGAAGATTAAGAACAGAGA+GGG | + | chr5_4:25855225-25855244 | Msa0846210:five_prime_UTR | 30.0% | |
AACACAAACAGAAAATCCTA+AGG | - | chr5_4:25855366-25855385 | None:intergenic | 30.0% | |
!! | CTGTTTGATTTGATCTTTAG+TGG | + | chr5_4:25855451-25855470 | Msa0846210:CDS | 30.0% |
!! | TTTGATTTGATCTTTAGTGG+TGG | + | chr5_4:25855454-25855473 | Msa0846210:CDS | 30.0% |
! | TTGATTTGATCTTTAGTGGT+GGG | + | chr5_4:25855455-25855474 | Msa0846210:CDS | 30.0% |
AGATAACTGTTGAACCAAAA+AGG | - | chr5_4:25856092-25856111 | None:intergenic | 30.0% | |
!!! | TTTTTGGTTCAACAGTTATC+TGG | + | chr5_4:25856091-25856110 | Msa0846210:intron | 30.0% |
!!! | CTACTGGTTTTCATGTTTTT+AGG | + | chr5_4:25856288-25856307 | Msa0846210:intron | 30.0% |
!! | CATAGCTTTAGTACTTGATA+TGG | + | chr5_4:25856358-25856377 | Msa0846210:intron | 30.0% |
! | CATGTTTTGTAGAATGAACA+TGG | + | chr5_4:25856618-25856637 | Msa0846210:three_prime_UTR | 30.0% |
!!! | GTATTTTTAGGTCCAAAATG+AGG | - | chr5_4:25856838-25856857 | None:intergenic | 30.0% |
TCTTCTTATCTTGCATTTCA+AGG | + | chr5_4:25856867-25856886 | Msa0846210:three_prime_UTR | 30.0% | |
AAAGAAGATTAAGAACAGAG+AGG | + | chr5_4:25855224-25855243 | Msa0846210:five_prime_UTR | 30.0% | |
AAGAAGATTAAGAACAGAGA+GGG | + | chr5_4:25855225-25855244 | Msa0846210:five_prime_UTR | 30.0% | |
AACACAAACAGAAAATCCTA+AGG | - | chr5_4:25855366-25855385 | None:intergenic | 30.0% | |
!! | CTGTTTGATTTGATCTTTAG+TGG | + | chr5_4:25855451-25855470 | Msa0846210:CDS | 30.0% |
!! | TTTGATTTGATCTTTAGTGG+TGG | + | chr5_4:25855454-25855473 | Msa0846210:CDS | 30.0% |
! | TTGATTTGATCTTTAGTGGT+GGG | + | chr5_4:25855455-25855474 | Msa0846210:CDS | 30.0% |
AGATAACTGTTGAACCAAAA+AGG | - | chr5_4:25856092-25856111 | None:intergenic | 30.0% | |
!!! | TTTTTGGTTCAACAGTTATC+TGG | + | chr5_4:25856091-25856110 | Msa0846210:intron | 30.0% |
!!! | CTACTGGTTTTCATGTTTTT+AGG | + | chr5_4:25856288-25856307 | Msa0846210:intron | 30.0% |
!! | CATAGCTTTAGTACTTGATA+TGG | + | chr5_4:25856358-25856377 | Msa0846210:intron | 30.0% |
! | CATGTTTTGTAGAATGAACA+TGG | + | chr5_4:25856618-25856637 | Msa0846210:three_prime_UTR | 30.0% |
!!! | GTATTTTTAGGTCCAAAATG+AGG | - | chr5_4:25856838-25856857 | None:intergenic | 30.0% |
!!! | TTTTTTTCAGCTGGTTCGAT+GGG | - | chr5_4:25855195-25855214 | None:intergenic | 35.0% |
CAACCAAATCCATCATGATT+CGG | + | chr5_4:25855306-25855325 | Msa0846210:exon | 35.0% | |
!! | TAACCGAATCATGATGGATT+TGG | - | chr5_4:25855312-25855331 | None:intergenic | 35.0% |
GAATACTAACCGAATCATGA+TGG | - | chr5_4:25855318-25855337 | None:intergenic | 35.0% | |
AGGTGATTCATATGTTGGAT+AGG | - | chr5_4:25855346-25855365 | None:intergenic | 35.0% | |
TCCAACATATGAATCACCTT+AGG | + | chr5_4:25855347-25855366 | Msa0846210:intron | 35.0% | |
TCCTAAGGTGATTCATATGT+TGG | - | chr5_4:25855351-25855370 | None:intergenic | 35.0% | |
AACAGAAGACGATGTGATAT+GGG | - | chr5_4:25855436-25855455 | None:intergenic | 35.0% | |
AAACAGAAGACGATGTGATA+TGG | - | chr5_4:25855437-25855456 | None:intergenic | 35.0% | |
! | TTTCCATTGTTATTGTCTCC+AGG | + | chr5_4:25855486-25855505 | Msa0846210:CDS | 35.0% |
ACCTGCATCGTAATGAATTT+CGG | + | chr5_4:25855510-25855529 | Msa0846210:intron | 35.0% | |
AGGCTCTATGAAAGTTGAAA+TGG | - | chr5_4:25855539-25855558 | None:intergenic | 35.0% | |
ACTAAGTAAGTACCTGAAGA+CGG | - | chr5_4:25855604-25855623 | None:intergenic | 35.0% | |
TTATCTGGCATCTCCATAAA+TGG | + | chr5_4:25856106-25856125 | Msa0846210:intron | 35.0% | |
! | TCTAACAAACAAGAGTGCAT+GGG | + | chr5_4:25856246-25856265 | Msa0846210:intron | 35.0% |
! | AATATCAACTGAAGTGCTAC+TGG | + | chr5_4:25856272-25856291 | Msa0846210:intron | 35.0% |
ACACACAACAAAATGAGCAA+TGG | - | chr5_4:25856419-25856438 | None:intergenic | 35.0% | |
CAATTTCGTCTTCGTTATCA+CGG | - | chr5_4:25856479-25856498 | None:intergenic | 35.0% | |
AACGAAGACGAAATTGATGA+TGG | + | chr5_4:25856483-25856502 | Msa0846210:CDS | 35.0% | |
TAGAATGAACATGGACATGT+GGG | + | chr5_4:25856627-25856646 | Msa0846210:three_prime_UTR | 35.0% | |
ACTTGCAGTTTACTGATAAG+TGG | + | chr5_4:25856654-25856673 | Msa0846210:three_prime_UTR | 35.0% | |
CTTGCAGTTTACTGATAAGT+GGG | + | chr5_4:25856655-25856674 | Msa0846210:three_prime_UTR | 35.0% | |
TATTGTAGCCGCTCTTTAAT+TGG | + | chr5_4:25856751-25856770 | Msa0846210:three_prime_UTR | 35.0% | |
! | CTGTTGTTATACCCTCATTT+TGG | + | chr5_4:25856823-25856842 | Msa0846210:three_prime_UTR | 35.0% |
!!! | TTTTTTTCAGCTGGTTCGAT+GGG | - | chr5_4:25855195-25855214 | None:intergenic | 35.0% |
CAACCAAATCCATCATGATT+CGG | + | chr5_4:25855306-25855325 | Msa0846210:exon | 35.0% | |
!! | TAACCGAATCATGATGGATT+TGG | - | chr5_4:25855312-25855331 | None:intergenic | 35.0% |
GAATACTAACCGAATCATGA+TGG | - | chr5_4:25855318-25855337 | None:intergenic | 35.0% | |
AGGTGATTCATATGTTGGAT+AGG | - | chr5_4:25855346-25855365 | None:intergenic | 35.0% | |
TCCAACATATGAATCACCTT+AGG | + | chr5_4:25855347-25855366 | Msa0846210:intron | 35.0% | |
TCCTAAGGTGATTCATATGT+TGG | - | chr5_4:25855351-25855370 | None:intergenic | 35.0% | |
AACAGAAGACGATGTGATAT+GGG | - | chr5_4:25855436-25855455 | None:intergenic | 35.0% | |
AAACAGAAGACGATGTGATA+TGG | - | chr5_4:25855437-25855456 | None:intergenic | 35.0% | |
! | TTTCCATTGTTATTGTCTCC+AGG | + | chr5_4:25855486-25855505 | Msa0846210:CDS | 35.0% |
ACCTGCATCGTAATGAATTT+CGG | + | chr5_4:25855510-25855529 | Msa0846210:intron | 35.0% | |
AGGCTCTATGAAAGTTGAAA+TGG | - | chr5_4:25855539-25855558 | None:intergenic | 35.0% | |
ACTAAGTAAGTACCTGAAGA+CGG | - | chr5_4:25855604-25855623 | None:intergenic | 35.0% | |
TTATCTGGCATCTCCATAAA+TGG | + | chr5_4:25856106-25856125 | Msa0846210:intron | 35.0% | |
! | TCTAACAAACAAGAGTGCAT+GGG | + | chr5_4:25856246-25856265 | Msa0846210:intron | 35.0% |
! | AATATCAACTGAAGTGCTAC+TGG | + | chr5_4:25856272-25856291 | Msa0846210:intron | 35.0% |
ACACACAACAAAATGAGCAA+TGG | - | chr5_4:25856419-25856438 | None:intergenic | 35.0% | |
CAATTTCGTCTTCGTTATCA+CGG | - | chr5_4:25856479-25856498 | None:intergenic | 35.0% | |
AACGAAGACGAAATTGATGA+TGG | + | chr5_4:25856483-25856502 | Msa0846210:CDS | 35.0% | |
TAGAATGAACATGGACATGT+GGG | + | chr5_4:25856627-25856646 | Msa0846210:three_prime_UTR | 35.0% | |
ACTTGCAGTTTACTGATAAG+TGG | + | chr5_4:25856654-25856673 | Msa0846210:three_prime_UTR | 35.0% | |
CTTGCAGTTTACTGATAAGT+GGG | + | chr5_4:25856655-25856674 | Msa0846210:three_prime_UTR | 35.0% | |
TATTGTAGCCGCTCTTTAAT+TGG | + | chr5_4:25856751-25856770 | Msa0846210:three_prime_UTR | 35.0% | |
! | CTGTTGTTATACCCTCATTT+TGG | + | chr5_4:25856823-25856842 | Msa0846210:three_prime_UTR | 35.0% |
!!! | GTTTTTTTCAGCTGGTTCGA+TGG | - | chr5_4:25855196-25855215 | None:intergenic | 40.0% |
!!! | CTGCTGAAGTTTTTTTCAGC+TGG | - | chr5_4:25855204-25855223 | None:intergenic | 40.0% |
GTACCTGGAGACAATAACAA+TGG | - | chr5_4:25855492-25855511 | None:intergenic | 40.0% | |
TCCGAAATTCATTACGATGC+AGG | - | chr5_4:25855514-25855533 | None:intergenic | 40.0% | |
! | GGATAATCTGAAACTCATGC+CGG | - | chr5_4:25855571-25855590 | None:intergenic | 40.0% |
ACTCTGTCTGAGTGAAAGAA+CGG | - | chr5_4:25855919-25855938 | None:intergenic | 40.0% | |
! | AGCATGTTAGGAAGCACATT+AGG | - | chr5_4:25855984-25856003 | None:intergenic | 40.0% |
AATGTGCTTCCTAACATGCT+TGG | + | chr5_4:25855984-25856003 | Msa0846210:intron | 40.0% | |
TTCCTAACATGCTTGGTCTA+TGG | + | chr5_4:25855991-25856010 | Msa0846210:intron | 40.0% | |
AAAAAGGCAAGGGATCTCTA+CGG | - | chr5_4:25856076-25856095 | None:intergenic | 40.0% | |
CTGTTGAACCAAAAAGGCAA+GGG | - | chr5_4:25856086-25856105 | None:intergenic | 40.0% | |
ACTGTTGAACCAAAAAGGCA+AGG | - | chr5_4:25856087-25856106 | None:intergenic | 40.0% | |
! | CTCTAACAAACAAGAGTGCA+TGG | + | chr5_4:25856245-25856264 | Msa0846210:intron | 40.0% |
! | CTAACAAACAAGAGTGCATG+GGG | + | chr5_4:25856247-25856266 | Msa0846210:intron | 40.0% |
AACACTTGTTCCAGTGTCAT+GGG | - | chr5_4:25856450-25856469 | None:intergenic | 40.0% | |
TAACACTTGTTCCAGTGTCA+TGG | - | chr5_4:25856451-25856470 | None:intergenic | 40.0% | |
TTGCTAACCTGGAAGATAGA+AGG | + | chr5_4:25856508-25856527 | Msa0846210:CDS | 40.0% | |
TGCTAACCTGGAAGATAGAA+GGG | + | chr5_4:25856509-25856528 | Msa0846210:CDS | 40.0% | |
GTAGAATGAACATGGACATG+TGG | + | chr5_4:25856626-25856645 | Msa0846210:three_prime_UTR | 40.0% | |
CTACCACTCCAATTAAAGAG+CGG | - | chr5_4:25856762-25856781 | None:intergenic | 40.0% | |
!!! | GTTTTTTTCAGCTGGTTCGA+TGG | - | chr5_4:25855196-25855215 | None:intergenic | 40.0% |
!!! | CTGCTGAAGTTTTTTTCAGC+TGG | - | chr5_4:25855204-25855223 | None:intergenic | 40.0% |
GTACCTGGAGACAATAACAA+TGG | - | chr5_4:25855492-25855511 | None:intergenic | 40.0% | |
TCCGAAATTCATTACGATGC+AGG | - | chr5_4:25855514-25855533 | None:intergenic | 40.0% | |
! | GGATAATCTGAAACTCATGC+CGG | - | chr5_4:25855571-25855590 | None:intergenic | 40.0% |
ACTCTGTCTGAGTGAAAGAA+CGG | - | chr5_4:25855919-25855938 | None:intergenic | 40.0% | |
! | AGCATGTTAGGAAGCACATT+AGG | - | chr5_4:25855984-25856003 | None:intergenic | 40.0% |
AATGTGCTTCCTAACATGCT+TGG | + | chr5_4:25855984-25856003 | Msa0846210:intron | 40.0% | |
TTCCTAACATGCTTGGTCTA+TGG | + | chr5_4:25855991-25856010 | Msa0846210:intron | 40.0% | |
AAAAAGGCAAGGGATCTCTA+CGG | - | chr5_4:25856076-25856095 | None:intergenic | 40.0% | |
CTGTTGAACCAAAAAGGCAA+GGG | - | chr5_4:25856086-25856105 | None:intergenic | 40.0% | |
ACTGTTGAACCAAAAAGGCA+AGG | - | chr5_4:25856087-25856106 | None:intergenic | 40.0% | |
! | CTCTAACAAACAAGAGTGCA+TGG | + | chr5_4:25856245-25856264 | Msa0846210:intron | 40.0% |
! | CTAACAAACAAGAGTGCATG+GGG | + | chr5_4:25856247-25856266 | Msa0846210:intron | 40.0% |
AACACTTGTTCCAGTGTCAT+GGG | - | chr5_4:25856450-25856469 | None:intergenic | 40.0% | |
TAACACTTGTTCCAGTGTCA+TGG | - | chr5_4:25856451-25856470 | None:intergenic | 40.0% | |
TTGCTAACCTGGAAGATAGA+AGG | + | chr5_4:25856508-25856527 | Msa0846210:CDS | 40.0% | |
TGCTAACCTGGAAGATAGAA+GGG | + | chr5_4:25856509-25856528 | Msa0846210:CDS | 40.0% | |
GTAGAATGAACATGGACATG+TGG | + | chr5_4:25856626-25856645 | Msa0846210:three_prime_UTR | 40.0% | |
CTACCACTCCAATTAAAGAG+CGG | - | chr5_4:25856762-25856781 | None:intergenic | 40.0% | |
TAAGAACAGAGAGGGTGAGA+AGG | + | chr5_4:25855233-25855252 | Msa0846210:five_prime_UTR | 45.0% | |
! | AGAGGGTGAGAAGGTTCTAA+AGG | + | chr5_4:25855242-25855261 | Msa0846210:five_prime_UTR | 45.0% |
!! | GAGGGTGAGAAGGTTCTAAA+GGG | + | chr5_4:25855243-25855262 | Msa0846210:five_prime_UTR | 45.0% |
!! | AGGGTGAGAAGGTTCTAAAG+GGG | + | chr5_4:25855244-25855263 | Msa0846210:five_prime_UTR | 45.0% |
! | ATGGATTTGGTTGCTGCATC+AGG | - | chr5_4:25855299-25855318 | None:intergenic | 45.0% |
TTCATTACGATGCAGGTACC+TGG | - | chr5_4:25855507-25855526 | None:intergenic | 45.0% | |
CATAGAGCCTTTACATGTGC+CGG | + | chr5_4:25855549-25855568 | Msa0846210:intron | 45.0% | |
CCTGAAGACGGTTATTACGA+TGG | - | chr5_4:25855592-25855611 | None:intergenic | 45.0% | |
CCATCGTAATAACCGTCTTC+AGG | + | chr5_4:25855589-25855608 | Msa0846210:CDS | 45.0% | |
CTTTCACTCAGACAGAGTTC+AGG | + | chr5_4:25855921-25855940 | Msa0846210:intron | 45.0% | |
GTCCATAGACCAAGCATGTT+AGG | - | chr5_4:25855996-25856015 | None:intergenic | 45.0% | |
! | GTAGAGATCCCTTGCCTTTT+TGG | + | chr5_4:25856075-25856094 | Msa0846210:intron | 45.0% |
!! | TGATGATGGAGTTGCTAACC+TGG | + | chr5_4:25856497-25856516 | Msa0846210:CDS | 45.0% |
AGCTTACCCTTCTATCTTCC+AGG | - | chr5_4:25856518-25856537 | None:intergenic | 45.0% | |
CAGTTTACTGATAAGTGGGC+AGG | + | chr5_4:25856659-25856678 | Msa0846210:three_prime_UTR | 45.0% | |
TAGCCGCTCTTTAATTGGAG+TGG | + | chr5_4:25856756-25856775 | Msa0846210:three_prime_UTR | 45.0% | |
CGCTCTTTAATTGGAGTGGT+AGG | + | chr5_4:25856760-25856779 | Msa0846210:three_prime_UTR | 45.0% | |
TTGGAGTGGTAGGCACAAAT+TGG | + | chr5_4:25856770-25856789 | Msa0846210:three_prime_UTR | 45.0% | |
TAAGAACAGAGAGGGTGAGA+AGG | + | chr5_4:25855233-25855252 | Msa0846210:five_prime_UTR | 45.0% | |
! | AGAGGGTGAGAAGGTTCTAA+AGG | + | chr5_4:25855242-25855261 | Msa0846210:five_prime_UTR | 45.0% |
!! | GAGGGTGAGAAGGTTCTAAA+GGG | + | chr5_4:25855243-25855262 | Msa0846210:five_prime_UTR | 45.0% |
!! | AGGGTGAGAAGGTTCTAAAG+GGG | + | chr5_4:25855244-25855263 | Msa0846210:five_prime_UTR | 45.0% |
! | ATGGATTTGGTTGCTGCATC+AGG | - | chr5_4:25855299-25855318 | None:intergenic | 45.0% |
TTCATTACGATGCAGGTACC+TGG | - | chr5_4:25855507-25855526 | None:intergenic | 45.0% | |
CATAGAGCCTTTACATGTGC+CGG | + | chr5_4:25855549-25855568 | Msa0846210:intron | 45.0% | |
CCTGAAGACGGTTATTACGA+TGG | - | chr5_4:25855592-25855611 | None:intergenic | 45.0% | |
CCATCGTAATAACCGTCTTC+AGG | + | chr5_4:25855589-25855608 | Msa0846210:CDS | 45.0% | |
CTTTCACTCAGACAGAGTTC+AGG | + | chr5_4:25855921-25855940 | Msa0846210:intron | 45.0% | |
GTCCATAGACCAAGCATGTT+AGG | - | chr5_4:25855996-25856015 | None:intergenic | 45.0% | |
! | GTAGAGATCCCTTGCCTTTT+TGG | + | chr5_4:25856075-25856094 | Msa0846210:intron | 45.0% |
!! | TGATGATGGAGTTGCTAACC+TGG | + | chr5_4:25856497-25856516 | Msa0846210:CDS | 45.0% |
AGCTTACCCTTCTATCTTCC+AGG | - | chr5_4:25856518-25856537 | None:intergenic | 45.0% | |
CAGTTTACTGATAAGTGGGC+AGG | + | chr5_4:25856659-25856678 | Msa0846210:three_prime_UTR | 45.0% | |
TAGCCGCTCTTTAATTGGAG+TGG | + | chr5_4:25856756-25856775 | Msa0846210:three_prime_UTR | 45.0% | |
CGCTCTTTAATTGGAGTGGT+AGG | + | chr5_4:25856760-25856779 | Msa0846210:three_prime_UTR | 45.0% | |
TTGGAGTGGTAGGCACAAAT+TGG | + | chr5_4:25856770-25856789 | Msa0846210:three_prime_UTR | 45.0% | |
ACTCATGCCGGCACATGTAA+AGG | - | chr5_4:25855559-25855578 | None:intergenic | 50.0% | |
! | CTTCTGCAGAAGCATACGAC+TGG | - | chr5_4:25855893-25855912 | None:intergenic | 50.0% |
GTCGTATGCTTCTGCAGAAG+AGG | + | chr5_4:25855893-25855912 | Msa0846210:intron | 50.0% | |
! | GTTGATGAAGCCCATGACAC+TGG | + | chr5_4:25856437-25856456 | Msa0846210:intron | 50.0% |
ACTCATGCCGGCACATGTAA+AGG | - | chr5_4:25855559-25855578 | None:intergenic | 50.0% | |
! | CTTCTGCAGAAGCATACGAC+TGG | - | chr5_4:25855893-25855912 | None:intergenic | 50.0% |
GTCGTATGCTTCTGCAGAAG+AGG | + | chr5_4:25855893-25855912 | Msa0846210:intron | 50.0% | |
! | GTTGATGAAGCCCATGACAC+TGG | + | chr5_4:25856437-25856456 | Msa0846210:intron | 50.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_4 | gene | 25855187 | 25856888 | 25855187 | ID=Msa0846210;Name=Msa0846210 |
chr5_4 | mRNA | 25855187 | 25856888 | 25855187 | ID=Msa0846210-mRNA-1;Parent=Msa0846210;Name=Msa0846210-mRNA-1;_AED=0.07;_eAED=0.07;_QI=133|0.33|0.5|1|0|0.5|4|286|108 |
chr5_4 | exon | 25855187 | 25855327 | 25855187 | ID=Msa0846210-mRNA-1:exon:10221;Parent=Msa0846210-mRNA-1 |
chr5_4 | exon | 25855402 | 25855507 | 25855402 | ID=Msa0846210-mRNA-1:exon:10222;Parent=Msa0846210-mRNA-1 |
chr5_4 | exon | 25855554 | 25855610 | 25855554 | ID=Msa0846210-mRNA-1:exon:10223;Parent=Msa0846210-mRNA-1 |
chr5_4 | exon | 25856447 | 25856888 | 25856447 | ID=Msa0846210-mRNA-1:exon:10224;Parent=Msa0846210-mRNA-1 |
chr5_4 | five_prime_UTR | 25855187 | 25855319 | 25855187 | ID=Msa0846210-mRNA-1:five_prime_utr;Parent=Msa0846210-mRNA-1 |
chr5_4 | CDS | 25855320 | 25855327 | 25855320 | ID=Msa0846210-mRNA-1:cds;Parent=Msa0846210-mRNA-1 |
chr5_4 | CDS | 25855402 | 25855507 | 25855402 | ID=Msa0846210-mRNA-1:cds;Parent=Msa0846210-mRNA-1 |
chr5_4 | CDS | 25855554 | 25855610 | 25855554 | ID=Msa0846210-mRNA-1:cds;Parent=Msa0846210-mRNA-1 |
chr5_4 | CDS | 25856447 | 25856602 | 25856447 | ID=Msa0846210-mRNA-1:cds;Parent=Msa0846210-mRNA-1 |
chr5_4 | three_prime_UTR | 25856603 | 25856888 | 25856603 | ID=Msa0846210-mRNA-1:three_prime_utr;Parent=Msa0846210-mRNA-1 |
Gene Sequence |
Protein sequence |