Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0726140 | XP_039689544.1 | 45.946 | 222 | 95 | 3 | 82 | 281 | 54 | 272 | 1.87e-54 | 189 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0726140 | A0A396I0Y9 | 45.946 | 222 | 95 | 3 | 82 | 281 | 83 | 301 | 7.28e-54 | 187 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012700 | Msa0726140 | 0.831487 | 1.623436e-55 | -8.615850e-47 |
| Msa0013750 | Msa0726140 | 0.810551 | 1.089517e-50 | -8.615850e-47 |
| Msa0014330 | Msa0726140 | 0.833631 | 4.772415e-56 | -8.615850e-47 |
| Msa0015400 | Msa0726140 | 0.809244 | 2.081982e-50 | -8.615850e-47 |
| Msa0015750 | Msa0726140 | 0.856643 | 2.801127e-62 | -8.615850e-47 |
| Msa0016570 | Msa0726140 | 0.857819 | 1.258265e-62 | -8.615850e-47 |
| Msa0016580 | Msa0726140 | 0.837912 | 3.927344e-57 | -8.615850e-47 |
| Msa0028480 | Msa0726140 | 0.831442 | 1.665217e-55 | -8.615850e-47 |
| Msa0056530 | Msa0726140 | 0.810312 | 1.226915e-50 | -8.615850e-47 |
| Msa0071500 | Msa0726140 | 0.808500 | 3.003844e-50 | -8.615850e-47 |
| Msa0092630 | Msa0726140 | 0.814174 | 1.762066e-51 | -8.615850e-47 |
| Msa0102070 | Msa0726140 | 0.896975 | 2.200300e-76 | -8.615850e-47 |
| Msa0107580 | Msa0726140 | 0.808750 | 2.656220e-50 | -8.615850e-47 |
| Msa0110270 | Msa0726140 | 0.823509 | 1.332825e-53 | -8.615850e-47 |
| Msa0111510 | Msa0726140 | 0.866153 | 3.511136e-65 | -8.615850e-47 |
| Msa0118060 | Msa0726140 | 0.805375 | 1.375933e-49 | -8.615850e-47 |
| Msa0604350 | Msa0726140 | 0.837281 | 5.703205e-57 | -8.615850e-47 |
| Msa0627410 | Msa0726140 | 0.806406 | 8.355377e-50 | -8.615850e-47 |
| Msa0636170 | Msa0726140 | 0.862792 | 3.942593e-64 | -8.615850e-47 |
| Msa0639610 | Msa0726140 | 0.854839 | 9.419944e-62 | -8.615850e-47 |
| Msa0661870 | Msa0726140 | 0.805876 | 1.080253e-49 | -8.615850e-47 |
| Msa0668260 | Msa0726140 | 0.819620 | 1.055666e-52 | -8.615850e-47 |
| Msa0673450 | Msa0726140 | 0.816077 | 6.659917e-52 | -8.615850e-47 |
| Msa0678930 | Msa0726140 | 0.877944 | 4.183732e-69 | -8.615850e-47 |
| Msa0694370 | Msa0726140 | 0.860423 | 2.087206e-63 | -8.615850e-47 |
| Msa0697060 | Msa0726140 | 0.819363 | 1.208205e-52 | -8.615850e-47 |
| Msa0703120 | Msa0726140 | 0.820057 | 8.387578e-53 | -8.615850e-47 |
| Msa0725850 | Msa0726140 | 0.830997 | 2.142026e-55 | -8.615850e-47 |
| Msa0726140 | Msa0729800 | 0.871170 | 8.377320e-67 | -8.615850e-47 |
| Msa0726140 | Msa0732310 | 0.823822 | 1.126197e-53 | -8.615850e-47 |
| Msa0726140 | Msa0732710 | 0.815988 | 6.969928e-52 | -8.615850e-47 |
| Msa0726140 | Msa0733290 | 0.873314 | 1.617958e-67 | -8.615850e-47 |
| Msa0726140 | Msa0735080 | 0.835245 | 1.876906e-56 | -8.615850e-47 |
| Msa0726140 | Msa0736000 | 0.818178 | 2.244466e-52 | -8.615850e-47 |
| Msa0726140 | Msa0741990 | 0.856657 | 2.774507e-62 | -8.615850e-47 |
| Msa0726140 | Msa0743810 | 0.903882 | 2.188967e-79 | -8.615850e-47 |
| Msa0726140 | Msa0745060 | 0.936725 | 1.095490e-97 | -8.615850e-47 |
| Msa0726140 | Msa0762360 | 0.807949 | 3.936595e-50 | -8.615850e-47 |
| Msa0726140 | Msa0763260 | 0.801995 | 6.921082e-49 | -8.615850e-47 |
| Msa0726140 | Msa0764960 | 0.819732 | 9.951417e-53 | -8.615850e-47 |
| Msa0726140 | Msa0766630 | 0.837953 | 3.833106e-57 | -8.615850e-47 |
| Msa0726140 | Msa0767720 | 0.868958 | 4.433185e-66 | -8.615850e-47 |
| Msa0726140 | Msa0775300 | 0.809309 | 2.016541e-50 | -8.615850e-47 |
| Msa0726140 | Msa0777790 | 0.807346 | 5.286134e-50 | -8.615850e-47 |
| Msa0726140 | Msa0777850 | 0.801993 | 6.927548e-49 | -8.615850e-47 |
| Msa0726140 | Msa0777870 | 0.873369 | 1.550610e-67 | -8.615850e-47 |
| Msa0726140 | Msa0783160 | 0.903278 | 4.092449e-79 | -8.615850e-47 |
| Msa0726140 | Msa0784290 | 0.829174 | 5.964940e-55 | -8.615850e-47 |
| Msa0726140 | Msa0784300 | 0.828166 | 1.045665e-54 | -8.615850e-47 |
| Msa0726140 | Msa0787600 | 0.888932 | 3.806519e-73 | -8.615850e-47 |
| Msa0726140 | Msa0789250 | 0.828824 | 7.251898e-55 | -8.615850e-47 |
| Msa0726140 | Msa0804210 | 0.802574 | 5.260629e-49 | -8.615850e-47 |
| Msa0726140 | Msa0808010 | 0.865612 | 5.204780e-65 | -8.615850e-47 |
| Msa0726140 | Msa0808020 | 0.860072 | 2.665277e-63 | -8.615850e-47 |
| Msa0726140 | Msa0811080 | 0.868975 | 4.378078e-66 | -8.615850e-47 |
| Msa0726140 | Msa0811270 | 0.829468 | 5.062632e-55 | -8.615850e-47 |
| Msa0726140 | Msa0818590 | 0.808748 | 2.658826e-50 | -8.615850e-47 |
| Msa0726140 | Msa0824000 | 0.804615 | 1.984274e-49 | -8.615850e-47 |
| Msa0726140 | Msa0824600 | 0.830638 | 2.624481e-55 | -8.615850e-47 |
| Msa0726140 | Msa0825860 | 0.943331 | 1.458119e-102 | -8.615850e-47 |
| Msa0726140 | Msa0826750 | 0.820494 | 6.657937e-53 | -8.615850e-47 |
| Msa0726140 | Msa0833290 | 0.856662 | 2.764349e-62 | -8.615850e-47 |
| Msa0726140 | Msa0833300 | 0.834304 | 3.238789e-56 | -8.615850e-47 |
| Msa0726140 | Msa0845930 | 0.818381 | 2.019087e-52 | -8.615850e-47 |
| Msa0726140 | Msa0846210 | 0.849087 | 4.049466e-60 | -8.615850e-47 |
| Msa0726140 | Msa0846330 | 0.936948 | 7.656266e-98 | -8.615850e-47 |
| Msa0726140 | Msa0846350 | 0.962295 | 1.044446e-120 | -8.615850e-47 |
| Msa0726140 | Msa0848060 | 0.819670 | 1.028125e-52 | -8.615850e-47 |
| Msa0726140 | Msa0848960 | 0.839686 | 1.366244e-57 | -8.615850e-47 |
| Msa0726140 | Msa0854980 | 0.825818 | 3.808465e-54 | -8.615850e-47 |
| Msa0726140 | Msa0858850 | 0.830293 | 3.186371e-55 | -8.615850e-47 |
| Msa0726140 | Msa0858980 | 0.864899 | 8.722331e-65 | -8.615850e-47 |
| Msa0726140 | Msa0865320 | 0.922129 | 1.467610e-88 | -8.615850e-47 |
| Msa0726140 | Msa0872230 | 0.836188 | 1.083007e-56 | -8.615850e-47 |
| Msa0726140 | Msa0873460 | 0.822658 | 2.106034e-53 | -8.615850e-47 |
| Msa0726140 | Msa0884150 | 0.824562 | 7.547485e-54 | -8.615850e-47 |
| Msa0726140 | Msa0885190 | 0.806013 | 1.010663e-49 | -8.615850e-47 |
| Msa0726140 | Msa0885280 | 0.865743 | 4.731165e-65 | -8.615850e-47 |
| Msa0726140 | Msa0885290 | 0.891408 | 4.083301e-74 | -8.615850e-47 |
| Msa0726140 | Msa0887020 | 0.808066 | 3.717776e-50 | -8.615850e-47 |
| Msa0726140 | Msa0887920 | 0.852697 | 3.895460e-61 | -8.615850e-47 |
| Msa0726140 | Msa0887990 | 0.806220 | 9.144512e-50 | -8.615850e-47 |
| Msa0726140 | Msa0888370 | 0.861890 | 7.463642e-64 | -8.615850e-47 |
| Msa0726140 | Msa0888420 | 0.833224 | 6.029812e-56 | -8.615850e-47 |
| Msa0726140 | Msa0889850 | 0.804912 | 1.720277e-49 | -8.615850e-47 |
| Msa0726140 | Msa0895270 | 0.809466 | 1.866476e-50 | -8.615850e-47 |
| Msa0726140 | Msa0896080 | 0.828236 | 1.005758e-54 | -8.615850e-47 |
| Msa0726140 | Msa0898080 | 0.819873 | 9.238452e-53 | -8.615850e-47 |
| Msa0726140 | Msa0898380 | 0.813954 | 1.970692e-51 | -8.615850e-47 |
| Msa0726140 | Msa0907260 | 0.853000 | 3.189500e-61 | -8.615850e-47 |
| Msa0726140 | Msa0914280 | 0.830765 | 2.442269e-55 | -8.615850e-47 |
| Msa0726140 | Msa0916680 | 0.817380 | 3.398733e-52 | -8.615850e-47 |
| Msa0726140 | Msa0917600 | 0.802211 | 6.248067e-49 | -8.615850e-47 |
| Msa0726140 | Msa0922720 | 0.826748 | 2.288204e-54 | -8.615850e-47 |
| Msa0726140 | Msa0935910 | 0.800002 | 1.767824e-48 | -8.615850e-47 |
| Msa0726140 | Msa0952350 | 0.843516 | 1.335729e-58 | -8.615850e-47 |
| Msa0726140 | Msa0952720 | 0.814446 | 1.534136e-51 | -8.615850e-47 |
| Msa0726140 | Msa0954020 | 0.812211 | 4.751610e-51 | -8.615850e-47 |
| Msa0726140 | Msa0954910 | 0.859037 | 5.457680e-63 | -8.615850e-47 |
| Msa0726140 | Msa0956270 | 0.843964 | 1.013181e-58 | -8.615850e-47 |
| Msa0726140 | Msa0957680 | 0.840345 | 9.195412e-58 | -8.615850e-47 |
| Msa0726140 | Msa0957860 | 0.851592 | 8.026821e-61 | -8.615850e-47 |
| Msa0726140 | Msa0957960 | 0.852341 | 4.919318e-61 | -8.615850e-47 |
| Msa0726140 | Msa0958550 | 0.803343 | 3.647735e-49 | -8.615850e-47 |
| Msa0726140 | Msa0966760 | 0.810656 | 1.034220e-50 | -8.615850e-47 |
| Msa0726140 | Msa0969260 | 0.818691 | 1.717539e-52 | -8.615850e-47 |
| Msa0726140 | Msa0974870 | 0.802991 | 4.313407e-49 | -8.615850e-47 |
| Msa0726140 | Msa0979410 | 0.852263 | 5.178087e-61 | -8.615850e-47 |
| Msa0726140 | Msa0979850 | 0.822285 | 2.570553e-53 | -8.615850e-47 |
| Msa0726140 | Msa0981270 | 0.816945 | 4.255826e-52 | -8.615850e-47 |
| Msa0726140 | Msa0981370 | 0.899689 | 1.545912e-77 | -8.615850e-47 |
| Msa0726140 | Msa0986360 | 0.814727 | 1.329515e-51 | -8.615850e-47 |
| Msa0726140 | Msa0986400 | 0.830369 | 3.052590e-55 | -8.615850e-47 |
| Msa0726140 | Msa0989060 | 0.899531 | 1.806607e-77 | -8.615850e-47 |
| Msa0726140 | Msa0991820 | 0.814830 | 1.261822e-51 | -8.615850e-47 |
| Msa0726140 | Msa0998690 | 0.803611 | 3.209899e-49 | -8.615850e-47 |
| Msa0726140 | Msa1002310 | 0.816783 | 4.629037e-52 | -8.615850e-47 |
| Msa0726140 | Msa1014540 | 0.806621 | 7.524847e-50 | -8.615850e-47 |
| Msa0726140 | Msa1015950 | 0.812577 | 3.953453e-51 | -8.615850e-47 |
| Msa0726140 | Msa1016280 | 0.916690 | 1.314062e-85 | -8.615850e-47 |
| Msa0726140 | Msa1023010 | 0.810355 | 1.201192e-50 | -8.615850e-47 |
| Msa0726140 | Msa1023050 | 0.820521 | 6.563956e-53 | -8.615850e-47 |
| Msa0726140 | Msa1024240 | 0.867797 | 1.049942e-65 | -8.615850e-47 |
| Msa0726140 | Msa1025360 | 0.910078 | 2.799695e-82 | -8.615850e-47 |
| Msa0726140 | Msa1025370 | 0.910291 | 2.206890e-82 | -8.615850e-47 |
| Msa0726140 | Msa1030060 | 0.823673 | 1.220644e-53 | -8.615850e-47 |
| Msa0726140 | Msa1037200 | 0.824104 | 9.672490e-54 | -8.615850e-47 |
| Msa0726140 | Msa1044830 | 0.909107 | 8.208721e-82 | -8.615850e-47 |
| Msa0726140 | Msa1044840 | 0.913607 | 5.054987e-84 | -8.615850e-47 |
| Msa0726140 | Msa1054790 | 0.829003 | 6.565288e-55 | -8.615850e-47 |
| Msa0726140 | Msa1057920 | 0.813430 | 2.569867e-51 | -8.615850e-47 |
| Msa0726140 | Msa1060840 | 0.844185 | 8.842546e-59 | -8.615850e-47 |
| Msa0726140 | Msa1062810 | 0.831325 | 1.779848e-55 | -8.615850e-47 |
| Msa0726140 | Msa1065570 | 0.811174 | 7.988650e-51 | -8.615850e-47 |
| Msa0726140 | Msa1077460 | 0.839069 | 1.975177e-57 | -8.615850e-47 |
| Msa0726140 | Msa1079180 | 0.809102 | 2.233679e-50 | -8.615850e-47 |
| Msa0726140 | Msa1092990 | 0.913174 | 8.354917e-84 | -8.615850e-47 |
| Msa0726140 | Msa1096580 | 0.838161 | 3.389321e-57 | -8.615850e-47 |
| Msa0726140 | Msa1099970 | 0.809189 | 2.139580e-50 | -8.615850e-47 |
| Msa0726140 | Msa1100980 | 0.903790 | 2.409061e-79 | -8.615850e-47 |
| Msa0726140 | Msa1109440 | 0.895400 | 9.937219e-76 | -8.615850e-47 |
| Msa0726140 | Msa1112300 | 0.822164 | 2.742403e-53 | -8.615850e-47 |
| Msa0726140 | Msa1117150 | 0.813728 | 2.210098e-51 | -8.615850e-47 |
| Msa0726140 | Msa1121200 | 0.897124 | 1.905112e-76 | -8.615850e-47 |
| Msa0726140 | Msa1123420 | 0.817017 | 4.101545e-52 | -8.615850e-47 |
| Msa0726140 | Msa1135220 | 0.814756 | 1.310427e-51 | -8.615850e-47 |
| Msa0726140 | Msa1135740 | 0.894376 | 2.614215e-75 | -8.615850e-47 |
| Msa0726140 | Msa1136090 | 0.908224 | 2.158214e-81 | -8.615850e-47 |
| Msa0726140 | Msa1137690 | 0.837241 | 5.838201e-57 | -8.615850e-47 |
| Msa0726140 | Msa1146110 | 0.886744 | 2.619101e-72 | -8.615850e-47 |
| Msa0726140 | Msa1149360 | 0.826868 | 2.141932e-54 | -8.615850e-47 |
| Msa0726140 | Msa1150370 | 0.864122 | 1.526360e-64 | -8.615850e-47 |
| Msa0726140 | Msa1160670 | 0.850557 | 1.572351e-60 | -8.615850e-47 |
| Msa0726140 | Msa1160690 | 0.809175 | 2.154186e-50 | -8.615850e-47 |
| Msa0726140 | Msa1164120 | 0.838441 | 2.870169e-57 | -8.615850e-47 |
| Msa0726140 | Msa1173920 | 0.862648 | 4.366131e-64 | -8.615850e-47 |
| Msa0726140 | Msa1178340 | 0.818298 | 2.108966e-52 | -8.615850e-47 |
| Msa0726140 | Msa1178720 | 0.806161 | 9.408378e-50 | -8.615850e-47 |
| Msa0726140 | Msa1182090 | 0.837478 | 5.078096e-57 | -8.615850e-47 |
| Msa0726140 | Msa1184420 | 0.813257 | 2.804996e-51 | -8.615850e-47 |
| Msa0726140 | Msa1187940 | 0.906355 | 1.620469e-80 | -8.615850e-47 |
| Msa0726140 | Msa1187950 | 0.880865 | 3.858791e-70 | -8.615850e-47 |
| Msa0726140 | Msa1192640 | 0.908051 | 2.608026e-81 | -8.615850e-47 |
| Msa0726140 | Msa1193730 | 0.837009 | 6.693973e-57 | -8.615850e-47 |
| Msa0726140 | Msa1230430 | 0.835708 | 1.433747e-56 | -8.615850e-47 |
| Msa0726140 | Msa1246880 | 0.863529 | 2.333495e-64 | -8.615850e-47 |
| Msa0726140 | Msa1248310 | 0.804437 | 2.160994e-49 | -8.615850e-47 |
| Msa0726140 | Msa1253000 | 0.812122 | 4.968478e-51 | -8.615850e-47 |
| Msa0726140 | Msa1260100 | 0.840718 | 7.343222e-58 | -8.615850e-47 |
| Msa0726140 | Msa1269670 | 0.933123 | 3.028928e-95 | -8.615850e-47 |
| Msa0726140 | Msa1270230 | 0.909207 | 7.353223e-82 | -8.615850e-47 |
| Msa0726140 | Msa1270240 | 0.914386 | 2.036579e-84 | -8.615850e-47 |
| Msa0726140 | Msa1270270 | 0.895469 | 9.303775e-76 | -8.615850e-47 |
| Msa0726140 | Msa1273230 | 0.846309 | 2.355879e-59 | -8.615850e-47 |
| Msa0726140 | Msa1283330 | 0.917061 | 8.389116e-86 | -8.615850e-47 |
| Msa0726140 | Msa1284680 | 0.809582 | 1.761849e-50 | -8.615850e-47 |
| Msa0726140 | Msa1285930 | 0.917220 | 6.921816e-86 | -8.615850e-47 |
| Msa0726140 | Msa1287800 | 0.914670 | 1.459184e-84 | -8.615850e-47 |
| Msa0726140 | Msa1287810 | 0.919744 | 3.068007e-87 | -8.615850e-47 |
| Msa0726140 | Msa1287820 | 0.830371 | 3.049553e-55 | -8.615850e-47 |
| Msa0726140 | Msa1287830 | 0.864713 | 9.973518e-65 | -8.615850e-47 |
| Msa0726140 | Msa1289420 | 0.828254 | 9.957278e-55 | -8.615850e-47 |
| Msa0726140 | Msa1289430 | 0.869766 | 2.420722e-66 | -8.615850e-47 |
| Msa0726140 | Msa1297210 | 0.889258 | 2.845246e-73 | -8.615850e-47 |
| Msa0726140 | Msa1305480 | 0.839327 | 1.693436e-57 | -8.615850e-47 |
| Msa0726140 | Msa1307890 | 0.873233 | 1.723865e-67 | -8.615850e-47 |
| Msa0726140 | Msa1307980 | 0.811977 | 5.344490e-51 | -8.615850e-47 |
| Msa0726140 | Msa1310120 | 0.825250 | 5.193113e-54 | -8.615850e-47 |
| Msa0726140 | Msa1313980 | 0.806411 | 8.336212e-50 | -8.615850e-47 |
| Msa0726140 | Msa1314280 | 0.833500 | 5.146303e-56 | -8.615850e-47 |
| Msa0726140 | Msa1320300 | 0.866318 | 3.112195e-65 | -8.615850e-47 |
| Msa0726140 | Msa1321560 | 0.845243 | 4.587194e-59 | -8.615850e-47 |
| Msa0726140 | Msa1340590 | 0.878705 | 2.262745e-69 | -8.615850e-47 |
| Msa0726140 | Msa1342200 | 0.869251 | 3.560517e-66 | -8.615850e-47 |
| Msa0726140 | Msa1342840 | 0.801332 | 9.467632e-49 | -8.615850e-47 |
| Msa0726140 | Msa1344520 | 0.823432 | 1.389355e-53 | -8.615850e-47 |
| Msa0726140 | Msa1345660 | 0.812927 | 3.312993e-51 | -8.615850e-47 |
| Msa0726140 | Msa1369430 | 0.849282 | 3.573731e-60 | -8.615850e-47 |
| Msa0726140 | Msa1370210 | 0.812452 | 4.210452e-51 | -8.615850e-47 |
| Msa0726140 | Msa1382690 | 0.816955 | 4.235687e-52 | -8.615850e-47 |
| Msa0726140 | Msa1382700 | 0.838307 | 3.108163e-57 | -8.615850e-47 |
| Msa0726140 | Msa1386330 | 0.849699 | 2.733834e-60 | -8.615850e-47 |
| Msa0726140 | Msa1397150 | 0.814161 | 1.773533e-51 | -8.615850e-47 |
| Msa0726140 | Msa1397580 | 0.874887 | 4.753511e-68 | -8.615850e-47 |
| Msa0726140 | Msa1402790 | 0.847148 | 1.388615e-59 | -8.615850e-47 |
| Msa0726140 | Msa1402930 | 0.807503 | 4.896091e-50 | -8.615850e-47 |
| Msa0726140 | Msa1404000 | 0.974464 | 3.343623e-138 | -8.615850e-47 |
| Msa0726140 | Msa1408780 | 0.833812 | 4.300557e-56 | -8.615850e-47 |
| Msa0726140 | Msa1415310 | 0.896189 | 4.682787e-76 | -8.615850e-47 |
| Msa0726140 | Msa1422180 | 0.902842 | 6.408029e-79 | -8.615850e-47 |
| Msa0726140 | Msa1433120 | 0.912976 | 1.049961e-83 | -8.615850e-47 |
| Msa0726140 | Msa1438250 | 0.813262 | 2.798560e-51 | -8.615850e-47 |
| Msa0726140 | Msa1451190 | 0.826576 | 2.515363e-54 | -8.615850e-47 |
| Msa0726140 | Msa1451570 | 0.837290 | 5.671489e-57 | -8.615850e-47 |
| Msa0123810 | Msa0726140 | 0.848825 | 4.787178e-60 | -8.615850e-47 |
| Msa0124100 | Msa0726140 | 0.838789 | 2.334154e-57 | -8.615850e-47 |
| Msa0124150 | Msa0726140 | 0.821827 | 3.281788e-53 | -8.615850e-47 |
| Msa0142220 | Msa0726140 | 0.879632 | 1.063416e-69 | -8.615850e-47 |
| Msa0145750 | Msa0726140 | 0.885480 | 7.842604e-72 | -8.615850e-47 |
| Msa0153910 | Msa0726140 | 0.864171 | 1.472932e-64 | -8.615850e-47 |
| Msa0159720 | Msa0726140 | 0.815945 | 7.125931e-52 | -8.615850e-47 |
| Msa0165190 | Msa0726140 | 0.813883 | 2.043024e-51 | -8.615850e-47 |
| Msa0188460 | Msa0726140 | 0.819274 | 1.266078e-52 | -8.615850e-47 |
| Msa0192970 | Msa0726140 | 0.846250 | 2.443399e-59 | -8.615850e-47 |
| Msa0197010 | Msa0726140 | 0.809987 | 1.442247e-50 | -8.615850e-47 |
| Msa0199240 | Msa0726140 | 0.819135 | 1.361614e-52 | -8.615850e-47 |
| Msa0200000 | Msa0726140 | 0.857329 | 1.758226e-62 | -8.615850e-47 |
| Msa0208090 | Msa0726140 | 0.804976 | 1.667537e-49 | -8.615850e-47 |
| Msa0227480 | Msa0726140 | 0.879641 | 1.055803e-69 | -8.615850e-47 |
| Msa0231000 | Msa0726140 | 0.839673 | 1.376247e-57 | -8.615850e-47 |
| Msa0232850 | Msa0726140 | 0.880468 | 5.356791e-70 | -8.615850e-47 |
| Msa0235140 | Msa0726140 | 0.878815 | 2.069696e-69 | -8.615850e-47 |
| Msa0365500 | Msa0726140 | 0.871345 | 7.336594e-67 | -8.615850e-47 |
| Msa0366580 | Msa0726140 | 0.870561 | 1.329975e-66 | -8.615850e-47 |
| Msa0369730 | Msa0726140 | 0.811960 | 5.391411e-51 | -8.615850e-47 |
| Msa0384800 | Msa0726140 | 0.942983 | 2.724262e-102 | -8.615850e-47 |
| Msa0384890 | Msa0726140 | 0.842015 | 3.347044e-58 | -8.615850e-47 |
| Msa0390070 | Msa0726140 | 0.816890 | 4.379543e-52 | -8.615850e-47 |
| Msa0391180 | Msa0726140 | 0.807448 | 5.031164e-50 | -8.615850e-47 |
| Msa0394970 | Msa0726140 | 0.848211 | 7.080576e-60 | -8.615850e-47 |
| Msa0396600 | Msa0726140 | 0.823607 | 1.264351e-53 | -8.615850e-47 |
| Msa0402290 | Msa0726140 | 0.801786 | 7.640126e-49 | -8.615850e-47 |
| Msa0406120 | Msa0726140 | 0.905348 | 4.720695e-80 | -8.615850e-47 |
| Msa0406280 | Msa0726140 | 0.813005 | 3.186120e-51 | -8.615850e-47 |
| Msa0407750 | Msa0726140 | 0.841921 | 3.543765e-58 | -8.615850e-47 |
| Msa0407960 | Msa0726140 | 0.813195 | 2.893934e-51 | -8.615850e-47 |
| Msa0414410 | Msa0726140 | 0.890754 | 7.402509e-74 | -8.615850e-47 |
| Msa0414420 | Msa0726140 | 0.914142 | 2.710482e-84 | -8.615850e-47 |
| Msa0423020 | Msa0726140 | 0.829540 | 4.862001e-55 | -8.615850e-47 |
| Msa0429880 | Msa0726140 | 0.801226 | 9.950656e-49 | -8.615850e-47 |
| Msa0430420 | Msa0726140 | 0.807785 | 4.265814e-50 | -8.615850e-47 |
| Msa0432290 | Msa0726140 | 0.815616 | 8.436515e-52 | -8.615850e-47 |
| Msa0435230 | Msa0726140 | 0.851003 | 1.177440e-60 | -8.615850e-47 |
| Msa0436780 | Msa0726140 | 0.857328 | 1.758983e-62 | -8.615850e-47 |
| Msa0436800 | Msa0726140 | 0.857224 | 1.888039e-62 | -8.615850e-47 |
| Msa0437990 | Msa0726140 | 0.816423 | 5.572999e-52 | -8.615850e-47 |
| Msa0438620 | Msa0726140 | 0.874035 | 9.248489e-68 | -8.615850e-47 |
| Msa0444130 | Msa0726140 | 0.810048 | 1.398714e-50 | -8.615850e-47 |
| Msa0450000 | Msa0726140 | 0.880951 | 3.593892e-70 | -8.615850e-47 |
| Msa0450570 | Msa0726140 | 0.846838 | 1.689267e-59 | -8.615850e-47 |
| Msa0451730 | Msa0726140 | 0.860085 | 2.641590e-63 | -8.615850e-47 |
| Msa0452620 | Msa0726140 | 0.832003 | 1.210895e-55 | -8.615850e-47 |
| Msa0452900 | Msa0726140 | 0.929714 | 4.674097e-93 | -8.615850e-47 |
| Msa0452910 | Msa0726140 | 0.813212 | 2.869413e-51 | -8.615850e-47 |
| Msa0453120 | Msa0726140 | 0.885885 | 5.526913e-72 | -8.615850e-47 |
| Msa0454370 | Msa0726140 | 0.837771 | 4.268878e-57 | -8.615850e-47 |
| Msa0454910 | Msa0726140 | 0.865187 | 7.081570e-65 | -8.615850e-47 |
| Msa0456200 | Msa0726140 | 0.813469 | 2.519721e-51 | -8.615850e-47 |
| Msa0459160 | Msa0726140 | 0.849508 | 3.090821e-60 | -8.615850e-47 |
| Msa0459170 | Msa0726140 | 0.865443 | 5.884246e-65 | -8.615850e-47 |
| Msa0479340 | Msa0726140 | 0.834131 | 3.579387e-56 | -8.615850e-47 |
| Msa0482620 | Msa0726140 | 0.835676 | 1.460788e-56 | -8.615850e-47 |
| Msa0247260 | Msa0726140 | 0.802314 | 5.950322e-49 | -8.615850e-47 |
| Msa0251320 | Msa0726140 | 0.828415 | 9.104114e-55 | -8.615850e-47 |
| Msa0256440 | Msa0726140 | 0.830382 | 3.030001e-55 | -8.615850e-47 |
| Msa0264450 | Msa0726140 | 0.820635 | 6.179455e-53 | -8.615850e-47 |
| Msa0267000 | Msa0726140 | 0.904255 | 1.485622e-79 | -8.615850e-47 |
| Msa0267010 | Msa0726140 | 0.905828 | 2.840786e-80 | -8.615850e-47 |
| Msa0270520 | Msa0726140 | 0.857359 | 1.721953e-62 | -8.615850e-47 |
| Msa0273100 | Msa0726140 | 0.828726 | 7.659665e-55 | -8.615850e-47 |
| Msa0282310 | Msa0726140 | 0.827030 | 1.958842e-54 | -8.615850e-47 |
| Msa0285810 | Msa0726140 | 0.807058 | 6.085534e-50 | -8.615850e-47 |
| Msa0290870 | Msa0726140 | 0.801192 | 1.011022e-48 | -8.615850e-47 |
| Msa0295770 | Msa0726140 | 0.815978 | 7.007722e-52 | -8.615850e-47 |
| Msa0300570 | Msa0726140 | 0.806352 | 8.576316e-50 | -8.615850e-47 |
| Msa0304170 | Msa0726140 | 0.848349 | 6.486900e-60 | -8.615850e-47 |
| Msa0306460 | Msa0726140 | 0.859114 | 5.172417e-63 | -8.615850e-47 |
| Msa0309020 | Msa0726140 | 0.830181 | 3.393728e-55 | -8.615850e-47 |
| Msa0311750 | Msa0726140 | 0.826462 | 2.677928e-54 | -8.615850e-47 |
| Msa0313760 | Msa0726140 | 0.877081 | 8.364701e-69 | -8.615850e-47 |
| Msa0326200 | Msa0726140 | 0.811946 | 5.428471e-51 | -8.615850e-47 |
| Msa0329190 | Msa0726140 | 0.816078 | 6.654682e-52 | -8.615850e-47 |
| Msa0337900 | Msa0726140 | 0.815398 | 9.434211e-52 | -8.615850e-47 |
| Msa0342240 | Msa0726140 | 0.898622 | 4.429734e-77 | -8.615850e-47 |
| Msa0353190 | Msa0726140 | 0.808440 | 3.094713e-50 | -8.615850e-47 |
| Msa0360510 | Msa0726140 | 0.883695 | 3.609332e-71 | -8.615850e-47 |
| Msa0363300 | Msa0726140 | 0.871989 | 4.487631e-67 | -8.615850e-47 |
| Msa0363750 | Msa0726140 | 0.833904 | 4.080154e-56 | -8.615850e-47 |
| Msa0485030 | Msa0726140 | 0.847005 | 1.519886e-59 | -8.615850e-47 |
| Msa0485370 | Msa0726140 | 0.807471 | 4.972650e-50 | -8.615850e-47 |
| Msa0486950 | Msa0726140 | 0.802388 | 5.746015e-49 | -8.615850e-47 |
| Msa0491590 | Msa0726140 | 0.884036 | 2.701399e-71 | -8.615850e-47 |
| Msa0502270 | Msa0726140 | 0.828272 | 9.856624e-55 | -8.615850e-47 |
| Msa0502760 | Msa0726140 | 0.854836 | 9.440273e-62 | -8.615850e-47 |
| Msa0505080 | Msa0726140 | 0.812228 | 4.712777e-51 | -8.615850e-47 |
| Msa0506190 | Msa0726140 | 0.820899 | 5.374681e-53 | -8.615850e-47 |
| Msa0506270 | Msa0726140 | 0.875078 | 4.091352e-68 | -8.615850e-47 |
| Msa0518540 | Msa0726140 | 0.806564 | 7.736200e-50 | -8.615850e-47 |
| Msa0534540 | Msa0726140 | 0.834413 | 3.040209e-56 | -8.615850e-47 |
| Msa0548060 | Msa0726140 | 0.816492 | 5.378069e-52 | -8.615850e-47 |
| Msa0564890 | Msa0726140 | 0.906931 | 8.745161e-81 | -8.615850e-47 |
| Msa0589780 | Msa0726140 | 0.813745 | 2.190455e-51 | -8.615850e-47 |
| Msa0590120 | Msa0726140 | 0.801447 | 8.965482e-49 | -8.615850e-47 |
| Msa0590780 | Msa0726140 | 0.802532 | 5.365977e-49 | -8.615850e-47 |
| Msa0596150 | Msa0726140 | 0.859636 | 3.606276e-63 | -8.615850e-47 |
| Msa0598780 | Msa0726140 | 0.802845 | 4.624562e-49 | -8.615850e-47 |
| Msa0600700 | Msa0726140 | 0.818182 | 2.239908e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0726140 | MtrunA17_Chr4g0002051 | 45.946 | 222 | 95 | 3 | 82 | 281 | 83 | 301 | 1.40e-57 | 187 |
| Msa0726140 | MtrunA17_Chr8g0381471 | 44.025 | 159 | 65 | 2 | 145 | 281 | 1 | 157 | 2.80e-37 | 130 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 51 sgRNAs with CRISPR-Local
Find 91 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGTTATCGAAAGCGATTTA+TGG | 0.217435 | 5_1:+26647735 | Msa0726140:CDS |
| AACCAATATTTAGGATAAAA+TGG | 0.269706 | 5_1:-26647565 | None:intergenic |
| GGTGGTTTCAAATCAACTTA+TGG | 0.292463 | 5_1:+26648132 | Msa0726140:CDS |
| ATTGTTTCAGGTAATTGATT+TGG | 0.299049 | 5_1:+26647504 | Msa0726140:intron |
| AATTGCTCATGTCGAAAGTT+TGG | 0.300899 | 5_1:+26646896 | Msa0726140:CDS |
| TAGGAATGATTGTGCGATTT+GGG | 0.304560 | 5_1:+26648324 | Msa0726140:intron |
| TTTCATGGAAAACTTGTTGA+TGG | 0.314872 | 5_1:+26648092 | Msa0726140:CDS |
| ATCAAATGGATGATGGAAAA+AGG | 0.314997 | 5_1:+26648349 | Msa0726140:CDS |
| GTCGGAATAAACCAATATTT+AGG | 0.320561 | 5_1:-26647574 | None:intergenic |
| CTTGATACTTGTCTTCCTCT+TGG | 0.328648 | 5_1:-26647972 | None:intergenic |
| TAATTAATCTTAATTGTTGT+AGG | 0.331207 | 5_1:+26647302 | Msa0726140:CDS |
| TTAGGAATGATTGTGCGATT+TGG | 0.345924 | 5_1:+26648323 | Msa0726140:intron |
| GAAGACAAGTATCAAGAAAA+TGG | 0.346177 | 5_1:+26647979 | Msa0726140:CDS |
| GGTTATCGAAAGCGATTTAT+GGG | 0.356200 | 5_1:+26647736 | Msa0726140:CDS |
| TTGATACTTGTCTTCCTCTT+GGG | 0.380492 | 5_1:-26647971 | None:intergenic |
| GGATTTGATCTTGCGGAATT+CGG | 0.384621 | 5_1:+26648548 | Msa0726140:CDS |
| ATCATCGTCAATAAATTTGT+TGG | 0.391722 | 5_1:-26647395 | None:intergenic |
| GTTTATTCCGACCACATTAT+CGG | 0.391757 | 5_1:+26647585 | Msa0726140:CDS |
| ACAATCTGTAGATCAAATAA+AGG | 0.392762 | 5_1:+26646836 | Msa0726140:CDS |
| TGAGCAATTTGTGAGCGTTT+TGG | 0.431058 | 5_1:-26646882 | None:intergenic |
| TCATCGTCAATAAATTTGTT+GGG | 0.434932 | 5_1:-26647394 | None:intergenic |
| TTAGCAACTCGTGTTGGCAT+TGG | 0.451963 | 5_1:+26647687 | Msa0726140:intron |
| GTGCGATTTGGGTAATCAAA+TGG | 0.465432 | 5_1:+26648335 | Msa0726140:CDS |
| ACAGAGATAGATTACGTTGA+AGG | 0.486255 | 5_1:+26647343 | Msa0726140:CDS |
| ATGGATCCCTCTTTCTATGT+GGG | 0.495254 | 5_1:+26648111 | Msa0726140:CDS |
| TTTGTTGCTCCACGTGGTTA+CGG | 0.500598 | 5_1:+26648177 | Msa0726140:CDS |
| GATGGATCCCTCTTTCTATG+TGG | 0.506410 | 5_1:+26648110 | Msa0726140:CDS |
| AGGAACTAGGAAGTTGCTGC+AGG | 0.508385 | 5_1:+26647363 | Msa0726140:CDS |
| TTGGGTAATCAAATGGATGA+TGG | 0.515751 | 5_1:+26648342 | Msa0726140:CDS |
| GATCCCTCTTTCTATGTGGG+TGG | 0.525374 | 5_1:+26648114 | Msa0726140:CDS |
| GAAACCACCCACATAGAAAG+AGG | 0.536877 | 5_1:-26648118 | None:intergenic |
| GAGTACTGAGTTTATTTCAA+AGG | 0.549217 | 5_1:+26647762 | Msa0726140:CDS |
| TAGATTACGTTGAAGGAACT+AGG | 0.550308 | 5_1:+26647350 | Msa0726140:CDS |
| TCTTAATTGTTGTAGGCAAG+AGG | 0.559172 | 5_1:+26647309 | Msa0726140:CDS |
| TTACACTAACAGGTGGATGA+AGG | 0.560129 | 5_1:+26648471 | Msa0726140:intron |
| CCACGTGGTTACGGAAGTCA+AGG | 0.569221 | 5_1:+26648186 | Msa0726140:CDS |
| ATCGAAAGCGATTTATGGGG+GGG | 0.572674 | 5_1:+26647740 | Msa0726140:CDS |
| TTAATAATTTACCGATAATG+TGG | 0.589365 | 5_1:-26647596 | None:intergenic |
| ATTTATTTAGCAACTCGTGT+TGG | 0.592550 | 5_1:+26647681 | Msa0726140:intron |
| TTATCGAAAGCGATTTATGG+GGG | 0.592691 | 5_1:+26647738 | Msa0726140:CDS |
| TAATTTACCGATAATGTGGT+CGG | 0.599623 | 5_1:-26647592 | None:intergenic |
| TATCGAAAGCGATTTATGGG+GGG | 0.620517 | 5_1:+26647739 | Msa0726140:CDS |
| AAAAGAGGGATTTGATCTTG+CGG | 0.622365 | 5_1:+26648541 | Msa0726140:CDS |
| GGAACTAGGAAGTTGCTGCA+GGG | 0.630697 | 5_1:+26647364 | Msa0726140:CDS |
| GTTATCGAAAGCGATTTATG+GGG | 0.643499 | 5_1:+26647737 | Msa0726140:CDS |
| TTTAAGTTTGTTGCTCCACG+TGG | 0.650344 | 5_1:+26648171 | Msa0726140:CDS |
| GTTCGTCAGCTCTTCCCAAG+AGG | 0.652918 | 5_1:+26647957 | Msa0726140:CDS |
| AAACCACCCACATAGAAAGA+GGG | 0.662397 | 5_1:-26648117 | None:intergenic |
| CCTTGACTTCCGTAACCACG+TGG | 0.696038 | 5_1:-26648186 | None:intergenic |
| CACGTGGTTACGGAAGTCAA+GGG | 0.703622 | 5_1:+26648187 | Msa0726140:CDS |
| TATGAGAAAGAACATAGACA+TGG | 0.713561 | 5_1:+26646957 | Msa0726140:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATACTCATAATTTTTTATTT+AGG | + | chr5_1:26648305-26648324 | Msa0726140:intron | 10.0% |
| !! | TAATTAATCTTAATTGTTGT+AGG | + | chr5_1:26647302-26647321 | Msa0726140:CDS | 15.0% |
| !! | CTACAATTATATGAAGAATT+TGG | - | chr5_1:26647147-26647166 | None:intergenic | 20.0% |
| !! | ATTTCTCTTTAAATTGTTTC+AGG | + | chr5_1:26647492-26647511 | Msa0726140:intron | 20.0% |
| !!! | AACCAATATTTAGGATAAAA+TGG | - | chr5_1:26647568-26647587 | None:intergenic | 20.0% |
| !! | TTAATAATTTACCGATAATG+TGG | - | chr5_1:26647599-26647618 | None:intergenic | 20.0% |
| !!! | TTTTTTATATCTTACGAGTT+TGG | - | chr5_1:26648213-26648232 | None:intergenic | 20.0% |
| ! | ACAATCTGTAGATCAAATAA+AGG | + | chr5_1:26646836-26646855 | Msa0726140:CDS | 25.0% |
| !! | GTATCTAATTTGTAACCTAA+AGG | - | chr5_1:26647065-26647084 | None:intergenic | 25.0% |
| ! | TACAAATTAGATACCTCAAA+AGG | + | chr5_1:26647071-26647090 | Msa0726140:intron | 25.0% |
| ! | AAGAATTTGGTTAATACCTT+TGG | - | chr5_1:26647134-26647153 | None:intergenic | 25.0% |
| ! | TTATATGTTTGTTTATGCAG+TGG | + | chr5_1:26647193-26647212 | Msa0726140:intron | 25.0% |
| !! | TCATCGTCAATAAATTTGTT+GGG | - | chr5_1:26647397-26647416 | None:intergenic | 25.0% |
| ! | ATCATCGTCAATAAATTTGT+TGG | - | chr5_1:26647398-26647417 | None:intergenic | 25.0% |
| !! | ATTGTTTCAGGTAATTGATT+TGG | + | chr5_1:26647504-26647523 | Msa0726140:intron | 25.0% |
| !! | CACCATTTTATCCTAAATAT+TGG | + | chr5_1:26647563-26647582 | Msa0726140:CDS | 25.0% |
| ! | ACCAACAGAAAAAATGATAA+AGG | + | chr5_1:26647714-26647733 | Msa0726140:CDS | 25.0% |
| ! | CCAACAGAAAAAATGATAAA+GGG | + | chr5_1:26647715-26647734 | Msa0726140:CDS | 25.0% |
| ! | CATAGCTATGTAGATAAAAA+GGG | - | chr5_1:26647821-26647840 | None:intergenic | 25.0% |
| ! | TCATAGCTATGTAGATAAAA+AGG | - | chr5_1:26647822-26647841 | None:intergenic | 25.0% |
| !!! | ACATTTTTAGTCTCTTTTCA+TGG | + | chr5_1:26648077-26648096 | Msa0726140:intron | 25.0% |
| !! | AAATCCCTCTTTTTATTGTA+AGG | - | chr5_1:26648534-26648553 | None:intergenic | 25.0% |
| !!! | AATTTTGCGAAAGTTTGCTA+AGG | + | chr5_1:26646923-26646942 | Msa0726140:CDS | 30.0% |
| TATGAGAAAGAACATAGACA+TGG | + | chr5_1:26646957-26646976 | Msa0726140:CDS | 30.0% | |
| AGGAAACTCTTCTCAATTAA+AGG | + | chr5_1:26647008-26647027 | Msa0726140:intron | 30.0% | |
| !!! | GGTGTTTTGGTTACAATAAT+CGG | - | chr5_1:26647044-26647063 | None:intergenic | 30.0% |
| ATTGTAACCAAAACACCTTT+AGG | + | chr5_1:26647047-26647066 | Msa0726140:intron | 30.0% | |
| !!! | TTTGTAACCTAAAGGTGTTT+TGG | - | chr5_1:26647057-26647076 | None:intergenic | 30.0% |
| AATTGCAGCTAATATTCCAA+AGG | + | chr5_1:26647115-26647134 | Msa0726140:intron | 30.0% | |
| GTCGGAATAAACCAATATTT+AGG | - | chr5_1:26647577-26647596 | None:intergenic | 30.0% | |
| TAATTTACCGATAATGTGGT+CGG | - | chr5_1:26647595-26647614 | None:intergenic | 30.0% | |
| ATTTATTTAGCAACTCGTGT+TGG | + | chr5_1:26647681-26647700 | Msa0726140:intron | 30.0% | |
| !!! | CCCTTTATCATTTTTTCTGT+TGG | - | chr5_1:26647718-26647737 | None:intergenic | 30.0% |
| !! | GAGTACTGAGTTTATTTCAA+AGG | + | chr5_1:26647762-26647781 | Msa0726140:CDS | 30.0% |
| TTCCTTCTCATAATTGACAT+CGG | + | chr5_1:26647899-26647918 | Msa0726140:intron | 30.0% | |
| GAAGACAAGTATCAAGAAAA+TGG | + | chr5_1:26647979-26647998 | Msa0726140:CDS | 30.0% | |
| !! | TTTCATGGAAAACTTGTTGA+TGG | + | chr5_1:26648092-26648111 | Msa0726140:CDS | 30.0% |
| !! | ATCAAATGGATGATGGAAAA+AGG | + | chr5_1:26648349-26648368 | Msa0726140:CDS | 30.0% |
| TTTACCACAATTACACTAAC+AGG | + | chr5_1:26648461-26648480 | Msa0726140:intron | 30.0% | |
| TGCATCCTTACAATAAAAAG+AGG | + | chr5_1:26648526-26648545 | Msa0726140:CDS | 30.0% | |
| GCATCCTTACAATAAAAAGA+GGG | + | chr5_1:26648527-26648546 | Msa0726140:CDS | 30.0% | |
| AATTGCTCATGTCGAAAGTT+TGG | + | chr5_1:26646896-26646915 | Msa0726140:CDS | 35.0% | |
| TTTGGTTACAATAATCGGAG+TGG | - | chr5_1:26647039-26647058 | None:intergenic | 35.0% | |
| ATTAGATACCTCAAAAGGCA+AGG | + | chr5_1:26647076-26647095 | Msa0726140:intron | 35.0% | |
| TCTTAATTGTTGTAGGCAAG+AGG | + | chr5_1:26647309-26647328 | Msa0726140:CDS | 35.0% | |
| ACAGAGATAGATTACGTTGA+AGG | + | chr5_1:26647343-26647362 | Msa0726140:CDS | 35.0% | |
| TAGATTACGTTGAAGGAACT+AGG | + | chr5_1:26647350-26647369 | Msa0726140:CDS | 35.0% | |
| GTTTATTCCGACCACATTAT+CGG | + | chr5_1:26647585-26647604 | Msa0726140:CDS | 35.0% | |
| GGTTATCGAAAGCGATTTAT+GGG | + | chr5_1:26647736-26647755 | Msa0726140:CDS | 35.0% | |
| GTTATCGAAAGCGATTTATG+GGG | + | chr5_1:26647737-26647756 | Msa0726140:CDS | 35.0% | |
| TTATCGAAAGCGATTTATGG+GGG | + | chr5_1:26647738-26647757 | Msa0726140:CDS | 35.0% | |
| CAATGAACGGTATCATGTAT+CGG | - | chr5_1:26647878-26647897 | None:intergenic | 35.0% | |
| TATGAGAAGGAACCAATGAA+CGG | - | chr5_1:26647891-26647910 | None:intergenic | 35.0% | |
| TTGATACTTGTCTTCCTCTT+GGG | - | chr5_1:26647974-26647993 | None:intergenic | 35.0% | |
| GGTGGTTTCAAATCAACTTA+TGG | + | chr5_1:26648132-26648151 | Msa0726140:CDS | 35.0% | |
| TTAGGAATGATTGTGCGATT+TGG | + | chr5_1:26648323-26648342 | Msa0726140:intron | 35.0% | |
| TAGGAATGATTGTGCGATTT+GGG | + | chr5_1:26648324-26648343 | Msa0726140:intron | 35.0% | |
| TTGGGTAATCAAATGGATGA+TGG | + | chr5_1:26648342-26648361 | Msa0726140:CDS | 35.0% | |
| AAAAGAGGGATTTGATCTTG+CGG | + | chr5_1:26648541-26648560 | Msa0726140:CDS | 35.0% | |
| ! | TGAGCAATTTGTGAGCGTTT+TGG | - | chr5_1:26646885-26646904 | None:intergenic | 40.0% |
| CTGCACAAAATCACAGTGTT+AGG | + | chr5_1:26646988-26647007 | Msa0726140:intron | 40.0% | |
| !! | GTTGACTTTTGATGAGAGTC+TGG | + | chr5_1:26647537-26647556 | Msa0726140:CDS | 40.0% |
| GGGTTATCGAAAGCGATTTA+TGG | + | chr5_1:26647735-26647754 | Msa0726140:CDS | 40.0% | |
| TATCGAAAGCGATTTATGGG+GGG | + | chr5_1:26647739-26647758 | Msa0726140:CDS | 40.0% | |
| CGATACATGATACCGTTCAT+TGG | + | chr5_1:26647876-26647895 | Msa0726140:intron | 40.0% | |
| TGCCGATGTCAATTATGAGA+AGG | - | chr5_1:26647904-26647923 | None:intergenic | 40.0% | |
| CATAATTGACATCGGCAGAA+AGG | + | chr5_1:26647907-26647926 | Msa0726140:intron | 40.0% | |
| CTTGATACTTGTCTTCCTCT+TGG | - | chr5_1:26647975-26647994 | None:intergenic | 40.0% | |
| ATGGATCCCTCTTTCTATGT+GGG | + | chr5_1:26648111-26648130 | Msa0726140:CDS | 40.0% | |
| AAACCACCCACATAGAAAGA+GGG | - | chr5_1:26648120-26648139 | None:intergenic | 40.0% | |
| !! | TTTAAGTTTGTTGCTCCACG+TGG | + | chr5_1:26648171-26648190 | Msa0726140:CDS | 40.0% |
| ! | GTGCGATTTGGGTAATCAAA+TGG | + | chr5_1:26648335-26648354 | Msa0726140:CDS | 40.0% |
| ACCACAATTACACTAACAGG+TGG | + | chr5_1:26648464-26648483 | Msa0726140:intron | 40.0% | |
| TCCACCTGTTAGTGTAATTG+TGG | - | chr5_1:26648468-26648487 | None:intergenic | 40.0% | |
| TTACACTAACAGGTGGATGA+AGG | + | chr5_1:26648471-26648490 | Msa0726140:intron | 40.0% | |
| GGATTTGATCTTGCGGAATT+CGG | + | chr5_1:26648548-26648567 | Msa0726140:CDS | 40.0% | |
| ! | TTAGCAACTCGTGTTGGCAT+TGG | + | chr5_1:26647687-26647706 | Msa0726140:intron | 45.0% |
| ATCGAAAGCGATTTATGGGG+GGG | + | chr5_1:26647740-26647759 | Msa0726140:CDS | 45.0% | |
| TGACATCGGCAGAAAGGAAT+TGG | + | chr5_1:26647913-26647932 | Msa0726140:intron | 45.0% | |
| GATGGATCCCTCTTTCTATG+TGG | + | chr5_1:26648110-26648129 | Msa0726140:CDS | 45.0% | |
| GAAACCACCCACATAGAAAG+AGG | - | chr5_1:26648121-26648140 | None:intergenic | 45.0% | |
| TTTGTTGCTCCACGTGGTTA+CGG | + | chr5_1:26648177-26648196 | Msa0726140:CDS | 45.0% | |
| !!! | TAAATATTATCTTATTTTAT+AGG | + | chr5_1:26647262-26647281 | Msa0726140:intron | 5.0% |
| ! | GCGAGATTCCTTGCCTTTTG+AGG | - | chr5_1:26647087-26647106 | None:intergenic | 50.0% |
| AGGAACTAGGAAGTTGCTGC+AGG | + | chr5_1:26647363-26647382 | Msa0726140:CDS | 50.0% | |
| GGAACTAGGAAGTTGCTGCA+GGG | + | chr5_1:26647364-26647383 | Msa0726140:CDS | 50.0% | |
| GATCCCTCTTTCTATGTGGG+TGG | + | chr5_1:26648114-26648133 | Msa0726140:CDS | 50.0% | |
| CACGTGGTTACGGAAGTCAA+GGG | + | chr5_1:26648187-26648206 | Msa0726140:CDS | 50.0% | |
| GTTCGTCAGCTCTTCCCAAG+AGG | + | chr5_1:26647957-26647976 | Msa0726140:CDS | 55.0% | |
| CCTTGACTTCCGTAACCACG+TGG | - | chr5_1:26648189-26648208 | None:intergenic | 55.0% | |
| CCACGTGGTTACGGAAGTCA+AGG | + | chr5_1:26648186-26648205 | Msa0726140:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 26646807 | 26648584 | 26646807 | ID=Msa0726140;Name=Msa0726140 |
| chr5_1 | mRNA | 26646807 | 26648584 | 26646807 | ID=Msa0726140-mRNA-1;Parent=Msa0726140;Name=Msa0726140-mRNA-1;_AED=0.48;_eAED=0.48;_QI=0|0|0|0.5|0.71|0.75|8|0|295 |
| chr5_1 | exon | 26646807 | 26647002 | 26646807 | ID=Msa0726140-mRNA-1:exon:9449;Parent=Msa0726140-mRNA-1 |
| chr5_1 | exon | 26647284 | 26647417 | 26647284 | ID=Msa0726140-mRNA-1:exon:9450;Parent=Msa0726140-mRNA-1 |
| chr5_1 | exon | 26647514 | 26647606 | 26647514 | ID=Msa0726140-mRNA-1:exon:9451;Parent=Msa0726140-mRNA-1 |
| chr5_1 | exon | 26647691 | 26647783 | 26647691 | ID=Msa0726140-mRNA-1:exon:9452;Parent=Msa0726140-mRNA-1 |
| chr5_1 | exon | 26647929 | 26648000 | 26647929 | ID=Msa0726140-mRNA-1:exon:9453;Parent=Msa0726140-mRNA-1 |
| chr5_1 | exon | 26648087 | 26648217 | 26648087 | ID=Msa0726140-mRNA-1:exon:9454;Parent=Msa0726140-mRNA-1 |
| chr5_1 | exon | 26648327 | 26648393 | 26648327 | ID=Msa0726140-mRNA-1:exon:9455;Parent=Msa0726140-mRNA-1 |
| chr5_1 | exon | 26648483 | 26648584 | 26648483 | ID=Msa0726140-mRNA-1:exon:9456;Parent=Msa0726140-mRNA-1 |
| chr5_1 | CDS | 26646807 | 26647002 | 26646807 | ID=Msa0726140-mRNA-1:cds;Parent=Msa0726140-mRNA-1 |
| chr5_1 | CDS | 26647284 | 26647417 | 26647284 | ID=Msa0726140-mRNA-1:cds;Parent=Msa0726140-mRNA-1 |
| chr5_1 | CDS | 26647514 | 26647606 | 26647514 | ID=Msa0726140-mRNA-1:cds;Parent=Msa0726140-mRNA-1 |
| chr5_1 | CDS | 26647691 | 26647783 | 26647691 | ID=Msa0726140-mRNA-1:cds;Parent=Msa0726140-mRNA-1 |
| chr5_1 | CDS | 26647929 | 26648000 | 26647929 | ID=Msa0726140-mRNA-1:cds;Parent=Msa0726140-mRNA-1 |
| chr5_1 | CDS | 26648087 | 26648217 | 26648087 | ID=Msa0726140-mRNA-1:cds;Parent=Msa0726140-mRNA-1 |
| chr5_1 | CDS | 26648327 | 26648393 | 26648327 | ID=Msa0726140-mRNA-1:cds;Parent=Msa0726140-mRNA-1 |
| chr5_1 | CDS | 26648483 | 26648584 | 26648483 | ID=Msa0726140-mRNA-1:cds;Parent=Msa0726140-mRNA-1 |
| Gene Sequence |
| Protein sequence |
