Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1407950 | XP_003602810.1 | 90.678 | 118 | 4 | 1 | 1 | 111 | 310 | 427 | 6.76e-59 | 197 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1407950 | sp|O23034|UBA5_ARATH | 57.258 | 124 | 40 | 3 | 1 | 111 | 308 | 431 | 3.75e-35 | 127 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1407950 | G7J3W6 | 90.678 | 118 | 4 | 1 | 1 | 111 | 310 | 427 | 3.23e-59 | 197 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0020930 | Msa1407950 | 0.800172 | 1.632657e-48 | -8.615850e-47 |
| Msa0112750 | Msa1407950 | 0.809369 | 1.957640e-50 | -8.615850e-47 |
| Msa0114060 | Msa1407950 | 0.800148 | 1.651329e-48 | -8.615850e-47 |
| Msa1353980 | Msa1407950 | 0.803437 | 3.487321e-49 | -8.615850e-47 |
| Msa1402590 | Msa1407950 | 0.803251 | 3.811165e-49 | -8.615850e-47 |
| Msa1407950 | Msa1438250 | 0.807777 | 4.281949e-50 | -8.615850e-47 |
| Msa1407950 | Msa1452240 | 0.819254 | 1.279087e-52 | -8.615850e-47 |
| Msa1407950 | Msa1466540 | 0.817666 | 2.929295e-52 | -8.615850e-47 |
| Msa0657970 | Msa1407950 | 0.819304 | 1.246049e-52 | -8.615850e-47 |
| Msa0709400 | Msa1407950 | 0.809219 | 2.108410e-50 | -8.615850e-47 |
| Msa0159930 | Msa1407950 | 0.819720 | 1.001506e-52 | -8.615850e-47 |
| Msa0220580 | Msa1407950 | 0.814345 | 1.615333e-51 | -8.615850e-47 |
| Msa1267960 | Msa1407950 | 0.811581 | 6.518247e-51 | -8.615850e-47 |
| Msa1324080 | Msa1407950 | 0.801267 | 9.758238e-49 | -8.615850e-47 |
| Msa0379270 | Msa1407950 | 0.981129 | 7.653733e-152 | -8.615850e-47 |
| Msa0411160 | Msa1407950 | 0.801242 | 9.877614e-49 | -8.615850e-47 |
| Msa0411190 | Msa1407950 | 0.801419 | 9.084052e-49 | -8.615850e-47 |
| Msa0479170 | Msa1407950 | 0.817513 | 3.171527e-52 | -8.615850e-47 |
| Msa1082500 | Msa1407950 | 0.824872 | 6.377971e-54 | -8.615850e-47 |
| Msa0309770 | Msa1407950 | 0.800387 | 1.476374e-48 | -8.615850e-47 |
| Msa0357340 | Msa1407950 | 0.804363 | 2.238984e-49 | -8.615850e-47 |
| Msa1124960 | Msa1407950 | 0.808180 | 3.515474e-50 | -8.615850e-47 |
| Msa1142020 | Msa1407950 | 0.807133 | 5.864362e-50 | -8.615850e-47 |
| Msa1147280 | Msa1407950 | 0.806683 | 7.304151e-50 | -8.615850e-47 |
| Msa0484780 | Msa1407950 | 0.810190 | 1.303581e-50 | -8.615850e-47 |
| Msa0512900 | Msa1407950 | 0.807774 | 4.288316e-50 | -8.615850e-47 |
| Msa0954530 | Msa1407950 | 0.800528 | 1.381850e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1407950 | MtrunA17_Chr3g0132251 | 90.678 | 118 | 4 | 1 | 1 | 111 | 310 | 427 | 6.22e-63 | 197 |
| Msa1407950 | MtrunA17_Chr2g0302261 | 89.831 | 118 | 5 | 1 | 1 | 111 | 310 | 427 | 3.16e-62 | 195 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1407950 | AT1G05350.1 | 57.258 | 124 | 40 | 3 | 1 | 111 | 308 | 431 | 3.81e-36 | 127 |
Find 34 sgRNAs with CRISPR-Local
Find 644 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAAAGTTCTTGTTAGGTTT+TGG | 0.268842 | tig0023338:-31624 | Msa1407950:five_prime_UTR |
| TTGTCATTGCTTGGAGCTTC+AGG | 0.275376 | tig0023338:+27634 | None:intergenic |
| ACAAGAACTTTAGTGTGTTT+TGG | 0.276561 | tig0023338:+31634 | None:intergenic |
| TGGTCAAGTCTCTCCTTATT+TGG | 0.295386 | tig0023338:-31604 | Msa1407950:intron |
| AATGGACCTTCTTCAATTAA+TGG | 0.295818 | tig0023338:+31146 | None:intergenic |
| TGCTGCCGCAAAAGCAAAAT+TGG | 0.323217 | tig0023338:-31180 | Msa1407950:CDS |
| AGTTCATGAGTGAGACCTTC+AGG | 0.342725 | tig0023338:+27691 | None:intergenic |
| GCATTTGAACATTGAGGGTT+TGG | 0.346399 | tig0023338:+31348 | None:intergenic |
| AACACACTAAAGTTCTTGTT+AGG | 0.352881 | tig0023338:-31630 | Msa1407950:five_prime_UTR |
| AGTGCAGGACTTACCAAATA+AGG | 0.355425 | tig0023338:+31591 | None:intergenic |
| TTTGGCTTCATTTGCATAGT+TGG | 0.362219 | tig0023338:+31366 | None:intergenic |
| ATGATAACGAATGGAATATA+AGG | 0.370693 | tig0023338:-31118 | Msa1407950:intron |
| TTTGCGGCAGCATCCCTTGT+TGG | 0.395869 | tig0023338:+31191 | None:intergenic |
| TTGGCTTCATTTGCATAGTT+GGG | 0.409034 | tig0023338:+31367 | None:intergenic |
| AAGCTGCATTTGAACATTGA+GGG | 0.470847 | tig0023338:+31343 | None:intergenic |
| AGGTCATCATTGTCATTGCT+TGG | 0.493955 | tig0023338:+27625 | None:intergenic |
| TTGGAGCTTCAGGAGTGACT+AGG | 0.499692 | tig0023338:+27644 | None:intergenic |
| CAAGCTGCATTTGAACATTG+AGG | 0.509271 | tig0023338:+31342 | None:intergenic |
| TGCAGCTTGCTTAAAACGAC+AGG | 0.535724 | tig0023338:-31328 | Msa1407950:intron |
| TGCCGCAAAAGCAAAATTGG+AGG | 0.546768 | tig0023338:-31177 | Msa1407950:CDS |
| GAAGGACCATTAATTGAAGA+AGG | 0.560820 | tig0023338:-31152 | Msa1407950:CDS |
| ACATTCTTGCAAAGCCAACA+AGG | 0.600442 | tig0023338:-31205 | Msa1407950:CDS |
| ATTACAGATTCCCTTCCTGA+AGG | 0.601876 | tig0023338:-27706 | Msa1407950:intron |
| AAAGCAAAATTGGAGGCTGA+AGG | 0.604076 | tig0023338:-31170 | Msa1407950:CDS |
| CATTGCACGATGATAACGAA+TGG | 0.612037 | tig0023338:-31127 | Msa1407950:CDS |
| CATTCGTTATCATCGTGCAA+TGG | 0.622722 | tig0023338:+31128 | None:intergenic |
| CATGAGTGAGACCTTCAGGA+AGG | 0.625640 | tig0023338:+27695 | None:intergenic |
| ATGAGTGAGACCTTCAGGAA+GGG | 0.634709 | tig0023338:+27696 | None:intergenic |
| GTTGCCTTCGTAGTTCGTCA+AGG | 0.640073 | tig0023338:+27605 | None:intergenic |
| TTCTGAAATTCATCCGCAGT+AGG | 0.652387 | tig0023338:+27667 | None:intergenic |
| CACTCATGAACTTCCTACTG+CGG | 0.662197 | tig0023338:-27680 | Msa1407950:CDS |
| ATGACCTTGACGAACTACGA+AGG | 0.678833 | tig0023338:-27609 | Msa1407950:CDS |
| CATTCTTGCAAAGCCAACAA+GGG | 0.682459 | tig0023338:-31204 | Msa1407950:CDS |
| GTTGATGGTTGTGAGCCAGA+TGG | 0.688176 | tig0023338:-30910 | Msa1407950:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCAACAAAAAATAAAATAAA+TGG | + | tig0023338:27673-27692 | None:intergenic | 10.0% |
| !! | TCAACAAAAAATAAAATAAA+TGG | + | tig0023338:27673-27692 | None:intergenic | 10.0% |
| !! | TAAGGAATAATAAGATATTT+AGG | - | tig0023338:30905-30924 | Msa1407950:intron | 15.0% |
| !! | AAGGAATAATAAGATATTTA+GGG | - | tig0023338:30906-30925 | Msa1407950:intron | 15.0% |
| !! | TAAGGAATAATAAGATATTT+AGG | - | tig0023338:30905-30924 | Msa1407950:intron | 15.0% |
| !! | AAGGAATAATAAGATATTTA+GGG | - | tig0023338:30906-30925 | Msa1407950:intron | 15.0% |
| !! | TGAAACTATAAATGTTTCAT+AGG | - | tig0023338:27992-28011 | Msa1407950:intron | 20.0% |
| !! | GAAACTATAAATGTTTCATA+GGG | - | tig0023338:27993-28012 | Msa1407950:intron | 20.0% |
| !! | AACAAAACTAAGTATATGAA+CGG | + | tig0023338:28153-28172 | None:intergenic | 20.0% |
| !! | AATCATAATCATAACATACA+TGG | - | tig0023338:29127-29146 | Msa1407950:intron | 20.0% |
| !!! | CATTATCTTGATTCATTTTA+CGG | - | tig0023338:29193-29212 | Msa1407950:intron | 20.0% |
| !!! | TTAATTTGTTTAGTAATGCT+TGG | + | tig0023338:29799-29818 | None:intergenic | 20.0% |
| !! | TGAAAACTATGAAAATTCTT+GGG | + | tig0023338:30282-30301 | None:intergenic | 20.0% |
| !! | ATGAAAACTATGAAAATTCT+TGG | + | tig0023338:30283-30302 | None:intergenic | 20.0% |
| !! | TGAAACTATAAATGTTTCAT+AGG | - | tig0023338:27992-28011 | Msa1407950:intron | 20.0% |
| !! | GAAACTATAAATGTTTCATA+GGG | - | tig0023338:27993-28012 | Msa1407950:intron | 20.0% |
| !! | AACAAAACTAAGTATATGAA+CGG | + | tig0023338:28153-28172 | None:intergenic | 20.0% |
| !! | AATCATAATCATAACATACA+TGG | - | tig0023338:29127-29146 | Msa1407950:intron | 20.0% |
| !!! | CATTATCTTGATTCATTTTA+CGG | - | tig0023338:29193-29212 | Msa1407950:intron | 20.0% |
| !!! | TTAATTTGTTTAGTAATGCT+TGG | + | tig0023338:29799-29818 | None:intergenic | 20.0% |
| !! | TGAAAACTATGAAAATTCTT+GGG | + | tig0023338:30282-30301 | None:intergenic | 20.0% |
| !! | ATGAAAACTATGAAAATTCT+TGG | + | tig0023338:30283-30302 | None:intergenic | 20.0% |
| !! | ATCTTTTGAACAAAAAAGGA+AGG | + | tig0023338:27711-27730 | None:intergenic | 25.0% |
| ! | TATTATATTCCTACCAATCA+TGG | + | tig0023338:27773-27792 | None:intergenic | 25.0% |
| ! | TACATACAAGAAAACAGAAA+CGG | + | tig0023338:27812-27831 | None:intergenic | 25.0% |
| !! | TTTCTGTTTTCTTGTATGTA+GGG | - | tig0023338:27812-27831 | Msa1407950:intron | 25.0% |
| ! | TATAGTTTCAATAATCACAC+AGG | + | tig0023338:27982-28001 | None:intergenic | 25.0% |
| !! | ATGATAACGAATGGAATATA+AGG | - | tig0023338:28108-28127 | Msa1407950:intron | 25.0% |
| !! | AATACCTGAACTTTTGATAT+TGG | + | tig0023338:28344-28363 | None:intergenic | 25.0% |
| ! | CTTATTTGTTTCAGATAAAC+AGG | + | tig0023338:28663-28682 | None:intergenic | 25.0% |
| !! | CTGTTTATCTGAAACAAATA+AGG | - | tig0023338:28661-28680 | Msa1407950:intron | 25.0% |
| ! | GTCATGATTATGTTATGTTA+TGG | + | tig0023338:28950-28969 | None:intergenic | 25.0% |
| !!! | CTTTTAGAAGATCATCATAT+AGG | - | tig0023338:29845-29864 | Msa1407950:intron | 25.0% |
| !!! | AATACCATTTTTACAAGTTC+TGG | + | tig0023338:30115-30134 | None:intergenic | 25.0% |
| ! | ATACTTGTAAAACACTCATA+TGG | - | tig0023338:30196-30215 | Msa1407950:intron | 25.0% |
| ! | TTTAACATGTTTAGTATGCA+TGG | - | tig0023338:30224-30243 | Msa1407950:intron | 25.0% |
| ! | ATATTACTACATGAAATGGA+GGG | + | tig0023338:30604-30623 | None:intergenic | 25.0% |
| ! | AGAAGTGAATCAAAAATCTA+GGG | + | tig0023338:30681-30700 | None:intergenic | 25.0% |
| ! | AAGAAGTGAATCAAAAATCT+AGG | + | tig0023338:30682-30701 | None:intergenic | 25.0% |
| !!! | TTTTTGATTCACTTCTTGAA+AGG | - | tig0023338:30685-30704 | Msa1407950:intron | 25.0% |
| ! | AATAGATGTTTAAGTAGGTT+TGG | + | tig0023338:30933-30952 | None:intergenic | 25.0% |
| ! | TTCAGTTTACTTGTAGTAAA+GGG | + | tig0023338:31137-31156 | None:intergenic | 25.0% |
| ! | TTTCAGTTTACTTGTAGTAA+AGG | + | tig0023338:31138-31157 | None:intergenic | 25.0% |
| ! | TTACTACAAGTAAACTGAAA+TGG | - | tig0023338:31138-31157 | Msa1407950:CDS | 25.0% |
| !!! | ACATTTACTTTTATTGCTGA+AGG | - | tig0023338:31423-31442 | Msa1407950:intron | 25.0% |
| !!! | CATTTACTTTTATTGCTGAA+GGG | - | tig0023338:31424-31443 | Msa1407950:intron | 25.0% |
| !! | ATCTTTTGAACAAAAAAGGA+AGG | + | tig0023338:27711-27730 | None:intergenic | 25.0% |
| ! | TATTATATTCCTACCAATCA+TGG | + | tig0023338:27773-27792 | None:intergenic | 25.0% |
| ! | TACATACAAGAAAACAGAAA+CGG | + | tig0023338:27812-27831 | None:intergenic | 25.0% |
| !! | TTTCTGTTTTCTTGTATGTA+GGG | - | tig0023338:27812-27831 | Msa1407950:intron | 25.0% |
| ! | TATAGTTTCAATAATCACAC+AGG | + | tig0023338:27982-28001 | None:intergenic | 25.0% |
| !! | ATGATAACGAATGGAATATA+AGG | - | tig0023338:28108-28127 | Msa1407950:intron | 25.0% |
| !! | AATACCTGAACTTTTGATAT+TGG | + | tig0023338:28344-28363 | None:intergenic | 25.0% |
| ! | CTTATTTGTTTCAGATAAAC+AGG | + | tig0023338:28663-28682 | None:intergenic | 25.0% |
| !! | CTGTTTATCTGAAACAAATA+AGG | - | tig0023338:28661-28680 | Msa1407950:intron | 25.0% |
| ! | GTCATGATTATGTTATGTTA+TGG | + | tig0023338:28950-28969 | None:intergenic | 25.0% |
| !!! | CTTTTAGAAGATCATCATAT+AGG | - | tig0023338:29845-29864 | Msa1407950:intron | 25.0% |
| !!! | AATACCATTTTTACAAGTTC+TGG | + | tig0023338:30115-30134 | None:intergenic | 25.0% |
| ! | ATACTTGTAAAACACTCATA+TGG | - | tig0023338:30196-30215 | Msa1407950:intron | 25.0% |
| ! | TTTAACATGTTTAGTATGCA+TGG | - | tig0023338:30224-30243 | Msa1407950:intron | 25.0% |
| ! | ATATTACTACATGAAATGGA+GGG | + | tig0023338:30604-30623 | None:intergenic | 25.0% |
| ! | AGAAGTGAATCAAAAATCTA+GGG | + | tig0023338:30681-30700 | None:intergenic | 25.0% |
| ! | AAGAAGTGAATCAAAAATCT+AGG | + | tig0023338:30682-30701 | None:intergenic | 25.0% |
| !!! | TTTTTGATTCACTTCTTGAA+AGG | - | tig0023338:30685-30704 | Msa1407950:intron | 25.0% |
| ! | AATAGATGTTTAAGTAGGTT+TGG | + | tig0023338:30933-30952 | None:intergenic | 25.0% |
| ! | TTCAGTTTACTTGTAGTAAA+GGG | + | tig0023338:31137-31156 | None:intergenic | 25.0% |
| ! | TTTCAGTTTACTTGTAGTAA+AGG | + | tig0023338:31138-31157 | None:intergenic | 25.0% |
| ! | TTACTACAAGTAAACTGAAA+TGG | - | tig0023338:31138-31157 | Msa1407950:CDS | 25.0% |
| !!! | ACATTTACTTTTATTGCTGA+AGG | - | tig0023338:31423-31442 | Msa1407950:intron | 25.0% |
| !!! | CATTTACTTTTATTGCTGAA+GGG | - | tig0023338:31424-31443 | Msa1407950:intron | 25.0% |
| ! | ACAAGAACTTTAGTGTGTTT+TGG | + | tig0023338:27595-27614 | None:intergenic | 30.0% |
| AACACACTAAAGTTCTTGTT+AGG | - | tig0023338:27596-27615 | Msa1407950:CDS | 30.0% | |
| ! | CTAAAGTTCTTGTTAGGTTT+TGG | - | tig0023338:27602-27621 | Msa1407950:CDS | 30.0% |
| ! | CGCAATCTTTTGAACAAAAA+AGG | + | tig0023338:27715-27734 | None:intergenic | 30.0% |
| ! | GCGAAATTTATTCTTTGAAG+AGG | - | tig0023338:27732-27751 | Msa1407950:intron | 30.0% |
| ACATACAAGAAAACAGAAAC+GGG | + | tig0023338:27811-27830 | None:intergenic | 30.0% | |
| ! | GTTTCTGTTTTCTTGTATGT+AGG | - | tig0023338:27811-27830 | Msa1407950:intron | 30.0% |
| AATGGACCTTCTTCAATTAA+TGG | + | tig0023338:28083-28102 | None:intergenic | 30.0% | |
| !! | AAAATTTTCAGTGTCGTTGA+TGG | - | tig0023338:28301-28320 | Msa1407950:intron | 30.0% |
| TACCCTATTGATAAGCTTAA+TGG | - | tig0023338:28384-28403 | Msa1407950:intron | 30.0% | |
| ACCCTATTGATAAGCTTAAT+GGG | - | tig0023338:28385-28404 | Msa1407950:intron | 30.0% | |
| ACCCATTAAGCTTATCAATA+GGG | + | tig0023338:28389-28408 | None:intergenic | 30.0% | |
| AACCCATTAAGCTTATCAAT+AGG | + | tig0023338:28390-28409 | None:intergenic | 30.0% | |
| TTTCTAGATACGTCTAGTAT+GGG | + | tig0023338:28421-28440 | None:intergenic | 30.0% | |
| ! | TTTCAGATAAACAGGTTGAA+TGG | + | tig0023338:28655-28674 | None:intergenic | 30.0% |
| GTAAACATGTAAGCATGAAT+AGG | + | tig0023338:29530-29549 | None:intergenic | 30.0% | |
| GCAAGTAATTCATTAAGCAA+AGG | + | tig0023338:29737-29756 | None:intergenic | 30.0% | |
| ! | GGGTTCTCTTTTATAAAAGA+TGG | - | tig0023338:29881-29900 | Msa1407950:intron | 30.0% |
| !! | ACACTTGGTTTGAAGTTTTT+GGG | + | tig0023338:30143-30162 | None:intergenic | 30.0% |
| AATTCTTGGGTATAGTTATG+TGG | + | tig0023338:30269-30288 | None:intergenic | 30.0% | |
| GATATTACTACATGAAATGG+AGG | + | tig0023338:30605-30624 | None:intergenic | 30.0% | |
| GTGGATATTACTACATGAAA+TGG | + | tig0023338:30608-30627 | None:intergenic | 30.0% | |
| !!! | TAGGGTTTAGTTTGTTGTTT+TGG | + | tig0023338:30638-30657 | None:intergenic | 30.0% |
| ! | TGAATCAAAAATCTAGGGTT+TGG | + | tig0023338:30676-30695 | None:intergenic | 30.0% |
| CATGGAATAGATGTTTAAGT+AGG | + | tig0023338:30938-30957 | None:intergenic | 30.0% | |
| ! | AATTAAACACGTTTAAGGCA+GGG | + | tig0023338:30978-30997 | None:intergenic | 30.0% |
| AGTCGAATTAAACACGTTTA+AGG | + | tig0023338:30983-31002 | None:intergenic | 30.0% | |
| TATGAGATATCAGCTATTTG+CGG | + | tig0023338:31018-31037 | None:intergenic | 30.0% | |
| AGAGGATTAATATTTCGGAA+AGG | + | tig0023338:31061-31080 | None:intergenic | 30.0% | |
| GTGTCAGAGGATTAATATTT+CGG | + | tig0023338:31066-31085 | None:intergenic | 30.0% | |
| TGTAATATTCTGATACTGAC+AGG | - | tig0023338:31093-31112 | Msa1407950:intron | 30.0% | |
| ! | ATTCTTTCTTTTGAGCTACA+TGG | - | tig0023338:31218-31237 | Msa1407950:intron | 30.0% |
| ! | TTCTTTCTTTTGAGCTACAT+GGG | - | tig0023338:31219-31238 | Msa1407950:intron | 30.0% |
| GGGAATCTGTAATAGATTTA+GGG | + | tig0023338:31513-31532 | None:intergenic | 30.0% | |
| AGGGAATCTGTAATAGATTT+AGG | + | tig0023338:31514-31533 | None:intergenic | 30.0% | |
| ! | ACAAGAACTTTAGTGTGTTT+TGG | + | tig0023338:27595-27614 | None:intergenic | 30.0% |
| AACACACTAAAGTTCTTGTT+AGG | - | tig0023338:27596-27615 | Msa1407950:CDS | 30.0% | |
| ! | CTAAAGTTCTTGTTAGGTTT+TGG | - | tig0023338:27602-27621 | Msa1407950:CDS | 30.0% |
| ! | CGCAATCTTTTGAACAAAAA+AGG | + | tig0023338:27715-27734 | None:intergenic | 30.0% |
| ! | GCGAAATTTATTCTTTGAAG+AGG | - | tig0023338:27732-27751 | Msa1407950:intron | 30.0% |
| ACATACAAGAAAACAGAAAC+GGG | + | tig0023338:27811-27830 | None:intergenic | 30.0% | |
| ! | GTTTCTGTTTTCTTGTATGT+AGG | - | tig0023338:27811-27830 | Msa1407950:intron | 30.0% |
| AATGGACCTTCTTCAATTAA+TGG | + | tig0023338:28083-28102 | None:intergenic | 30.0% | |
| !! | AAAATTTTCAGTGTCGTTGA+TGG | - | tig0023338:28301-28320 | Msa1407950:intron | 30.0% |
| TACCCTATTGATAAGCTTAA+TGG | - | tig0023338:28384-28403 | Msa1407950:intron | 30.0% | |
| ACCCTATTGATAAGCTTAAT+GGG | - | tig0023338:28385-28404 | Msa1407950:intron | 30.0% | |
| ACCCATTAAGCTTATCAATA+GGG | + | tig0023338:28389-28408 | None:intergenic | 30.0% | |
| AACCCATTAAGCTTATCAAT+AGG | + | tig0023338:28390-28409 | None:intergenic | 30.0% | |
| TTTCTAGATACGTCTAGTAT+GGG | + | tig0023338:28421-28440 | None:intergenic | 30.0% | |
| ! | TTTCAGATAAACAGGTTGAA+TGG | + | tig0023338:28655-28674 | None:intergenic | 30.0% |
| GTAAACATGTAAGCATGAAT+AGG | + | tig0023338:29530-29549 | None:intergenic | 30.0% | |
| GCAAGTAATTCATTAAGCAA+AGG | + | tig0023338:29737-29756 | None:intergenic | 30.0% | |
| ! | GGGTTCTCTTTTATAAAAGA+TGG | - | tig0023338:29881-29900 | Msa1407950:intron | 30.0% |
| !! | ACACTTGGTTTGAAGTTTTT+GGG | + | tig0023338:30143-30162 | None:intergenic | 30.0% |
| AATTCTTGGGTATAGTTATG+TGG | + | tig0023338:30269-30288 | None:intergenic | 30.0% | |
| GATATTACTACATGAAATGG+AGG | + | tig0023338:30605-30624 | None:intergenic | 30.0% | |
| GTGGATATTACTACATGAAA+TGG | + | tig0023338:30608-30627 | None:intergenic | 30.0% | |
| !!! | TAGGGTTTAGTTTGTTGTTT+TGG | + | tig0023338:30638-30657 | None:intergenic | 30.0% |
| ! | TGAATCAAAAATCTAGGGTT+TGG | + | tig0023338:30676-30695 | None:intergenic | 30.0% |
| CATGGAATAGATGTTTAAGT+AGG | + | tig0023338:30938-30957 | None:intergenic | 30.0% | |
| ! | AATTAAACACGTTTAAGGCA+GGG | + | tig0023338:30978-30997 | None:intergenic | 30.0% |
| AGTCGAATTAAACACGTTTA+AGG | + | tig0023338:30983-31002 | None:intergenic | 30.0% | |
| TATGAGATATCAGCTATTTG+CGG | + | tig0023338:31018-31037 | None:intergenic | 30.0% | |
| AGAGGATTAATATTTCGGAA+AGG | + | tig0023338:31061-31080 | None:intergenic | 30.0% | |
| GTGTCAGAGGATTAATATTT+CGG | + | tig0023338:31066-31085 | None:intergenic | 30.0% | |
| TGTAATATTCTGATACTGAC+AGG | - | tig0023338:31093-31112 | Msa1407950:intron | 30.0% | |
| ! | ATTCTTTCTTTTGAGCTACA+TGG | - | tig0023338:31218-31237 | Msa1407950:intron | 30.0% |
| ! | TTCTTTCTTTTGAGCTACAT+GGG | - | tig0023338:31219-31238 | Msa1407950:intron | 30.0% |
| GGGAATCTGTAATAGATTTA+GGG | + | tig0023338:31513-31532 | None:intergenic | 30.0% | |
| AGGGAATCTGTAATAGATTT+AGG | + | tig0023338:31514-31533 | None:intergenic | 30.0% | |
| TATATTCCTACCAATCATGG+TGG | + | tig0023338:27770-27789 | None:intergenic | 35.0% | |
| TTGGCTTCATTTGCATAGTT+GGG | + | tig0023338:27862-27881 | None:intergenic | 35.0% | |
| ! | TTTGGCTTCATTTGCATAGT+TGG | + | tig0023338:27863-27882 | None:intergenic | 35.0% |
| AAGCTGCATTTGAACATTGA+GGG | + | tig0023338:27886-27905 | None:intergenic | 35.0% | |
| GAAGGACCATTAATTGAAGA+AGG | - | tig0023338:28074-28093 | Msa1407950:intron | 35.0% | |
| GCAACAACACTACTTGATAT+TGG | + | tig0023338:28240-28259 | None:intergenic | 35.0% | |
| !! | TTTTTAGCCGTCACATTTAC+TGG | - | tig0023338:28268-28287 | Msa1407950:intron | 35.0% |
| ! | CTTTTGATATTGGTACCATC+TGG | + | tig0023338:28334-28353 | None:intergenic | 35.0% |
| GGTACCAATATCAAAAGTTC+AGG | - | tig0023338:28337-28356 | Msa1407950:intron | 35.0% | |
| CTTTCTAGATACGTCTAGTA+TGG | + | tig0023338:28422-28441 | None:intergenic | 35.0% | |
| CAGGAAGTTATGGATATTCA+AGG | + | tig0023338:28581-28600 | None:intergenic | 35.0% | |
| ATATCCATAACTTCCTGTTG+CGG | - | tig0023338:28584-28603 | Msa1407950:intron | 35.0% | |
| TACCTATAGCCTAGGATTTA+GGG | + | tig0023338:28719-28738 | None:intergenic | 35.0% | |
| TTACCTATAGCCTAGGATTT+AGG | + | tig0023338:28720-28739 | None:intergenic | 35.0% | |
| AAGTAAGATGAACCTATGAC+GGG | + | tig0023338:28842-28861 | None:intergenic | 35.0% | |
| CAAGTAAGATGAACCTATGA+CGG | + | tig0023338:28843-28862 | None:intergenic | 35.0% | |
| AGGTTCATCTTACTTGGTAT+AGG | - | tig0023338:28847-28866 | Msa1407950:intron | 35.0% | |
| GAATCTAAACCGAACGATTA+GGG | - | tig0023338:28972-28991 | Msa1407950:intron | 35.0% | |
| AATCTAAACCGAACGATTAG+GGG | - | tig0023338:28973-28992 | Msa1407950:intron | 35.0% | |
| CGTGCATAAGTTCATTCATT+AGG | - | tig0023338:29151-29170 | Msa1407950:intron | 35.0% | |
| ! | TCTCTTGTTATCCAAATCAG+GGG | + | tig0023338:29349-29368 | None:intergenic | 35.0% |
| ! | GTCTCTTGTTATCCAAATCA+GGG | + | tig0023338:29350-29369 | None:intergenic | 35.0% |
| ! | TGTCTCTTGTTATCCAAATC+AGG | + | tig0023338:29351-29370 | None:intergenic | 35.0% |
| ! | ACACCTACATCTTGTTTACT+CGG | - | tig0023338:29374-29393 | Msa1407950:intron | 35.0% |
| GGTGATTAATGTAATGTAGG+TGG | + | tig0023338:29483-29502 | None:intergenic | 35.0% | |
| GACGGTGATTAATGTAATGT+AGG | + | tig0023338:29486-29505 | None:intergenic | 35.0% | |
| TCATGCTTACATGTTTACCT+CGG | - | tig0023338:29532-29551 | Msa1407950:intron | 35.0% | |
| AAATGATACGATGCGATTTG+GGG | + | tig0023338:29762-29781 | None:intergenic | 35.0% | |
| GAAATGATACGATGCGATTT+GGG | + | tig0023338:29763-29782 | None:intergenic | 35.0% | |
| TGAAATGATACGATGCGATT+TGG | + | tig0023338:29764-29783 | None:intergenic | 35.0% | |
| AAGATCATCATATAGGACCT+TGG | - | tig0023338:29852-29871 | Msa1407950:intron | 35.0% | |
| CAGTCCAGAACTTGTAAAAA+TGG | - | tig0023338:30108-30127 | Msa1407950:intron | 35.0% | |
| !! | GACACTTGGTTTGAAGTTTT+TGG | + | tig0023338:30144-30163 | None:intergenic | 35.0% |
| CCAAAATACTTAGAGACACT+TGG | + | tig0023338:30158-30177 | None:intergenic | 35.0% | |
| ! | CCAAGTGTCTCTAAGTATTT+TGG | - | tig0023338:30155-30174 | Msa1407950:intron | 35.0% |
| TTAGTATGCATGGCAAGAAA+AGG | - | tig0023338:30234-30253 | Msa1407950:intron | 35.0% | |
| TAGTATGCATGGCAAGAAAA+GGG | - | tig0023338:30235-30254 | Msa1407950:intron | 35.0% | |
| AGACATAATCATGATCCCAA+TGG | - | tig0023338:30315-30334 | Msa1407950:intron | 35.0% | |
| GACATAATCATGATCCCAAT+GGG | - | tig0023338:30316-30335 | Msa1407950:intron | 35.0% | |
| ! | GATGCTTCAAGAACTTGTTT+AGG | + | tig0023338:30366-30385 | None:intergenic | 35.0% |
| !! | AGATGGATTGGTTTAAGTCA+AGG | + | tig0023338:30441-30460 | None:intergenic | 35.0% |
| ACCATGATTCTTGATCATGA+AGG | - | tig0023338:30486-30505 | Msa1407950:intron | 35.0% | |
| TCCTTCATGATCAAGAATCA+TGG | + | tig0023338:30490-30509 | None:intergenic | 35.0% | |
| TATCTTGAAGTCAAGAGCTA+GGG | + | tig0023338:30553-30572 | None:intergenic | 35.0% | |
| TTATCTTGAAGTCAAGAGCT+AGG | + | tig0023338:30554-30573 | None:intergenic | 35.0% | |
| !!! | TTGTTGTTTTGGAACTCTTG+TGG | + | tig0023338:30627-30646 | None:intergenic | 35.0% |
| CTCATGATCTTTCAAGCTAA+GGG | + | tig0023338:30744-30763 | None:intergenic | 35.0% | |
| TCTCATGATCTTTCAAGCTA+AGG | + | tig0023338:30745-30764 | None:intergenic | 35.0% | |
| TCCAAAACTTCTTCTATCCT+TGG | + | tig0023338:30788-30807 | None:intergenic | 35.0% | |
| !!! | GGATAGAAGAAGTTTTGGAA+AGG | - | tig0023338:30789-30808 | Msa1407950:intron | 35.0% |
| !!! | GAAGAAGTTTTGGAAAGGTT+TGG | - | tig0023338:30794-30813 | Msa1407950:intron | 35.0% |
| ! | ATTAAACACGTTTAAGGCAG+GGG | + | tig0023338:30977-30996 | None:intergenic | 35.0% |
| ! | GAATTAAACACGTTTAAGGC+AGG | + | tig0023338:30979-30998 | None:intergenic | 35.0% |
| TATTTCGGAAAGGAGGTTAA+AGG | + | tig0023338:31051-31070 | None:intergenic | 35.0% | |
| GGATTAATATTTCGGAAAGG+AGG | + | tig0023338:31058-31077 | None:intergenic | 35.0% | |
| AATATTCTGATACTGACAGG+CGG | - | tig0023338:31096-31115 | Msa1407950:intron | 35.0% | |
| CTACAAGTAAACTGAAATGG+TGG | - | tig0023338:31141-31160 | Msa1407950:CDS | 35.0% | |
| !! | ACTCTAAAGCTCTTGATGTT+GGG | - | tig0023338:31192-31211 | Msa1407950:CDS | 35.0% |
| ! | TCCTTCATGGAAATGTTTTC+AGG | - | tig0023338:31272-31291 | Msa1407950:intron | 35.0% |
| TCCTGAAAACATTTCCATGA+AGG | + | tig0023338:31276-31295 | None:intergenic | 35.0% | |
| !! | GATGTTTGCTTTTGCAATGA+AGG | + | tig0023338:31321-31340 | None:intergenic | 35.0% |
| GTAATAGATTTAGGGACAAG+AGG | + | tig0023338:31505-31524 | None:intergenic | 35.0% | |
| TATATTCCTACCAATCATGG+TGG | + | tig0023338:27770-27789 | None:intergenic | 35.0% | |
| TTGGCTTCATTTGCATAGTT+GGG | + | tig0023338:27862-27881 | None:intergenic | 35.0% | |
| ! | TTTGGCTTCATTTGCATAGT+TGG | + | tig0023338:27863-27882 | None:intergenic | 35.0% |
| AAGCTGCATTTGAACATTGA+GGG | + | tig0023338:27886-27905 | None:intergenic | 35.0% | |
| GAAGGACCATTAATTGAAGA+AGG | - | tig0023338:28074-28093 | Msa1407950:intron | 35.0% | |
| GCAACAACACTACTTGATAT+TGG | + | tig0023338:28240-28259 | None:intergenic | 35.0% | |
| !! | TTTTTAGCCGTCACATTTAC+TGG | - | tig0023338:28268-28287 | Msa1407950:intron | 35.0% |
| ! | CTTTTGATATTGGTACCATC+TGG | + | tig0023338:28334-28353 | None:intergenic | 35.0% |
| GGTACCAATATCAAAAGTTC+AGG | - | tig0023338:28337-28356 | Msa1407950:intron | 35.0% | |
| CTTTCTAGATACGTCTAGTA+TGG | + | tig0023338:28422-28441 | None:intergenic | 35.0% | |
| CAGGAAGTTATGGATATTCA+AGG | + | tig0023338:28581-28600 | None:intergenic | 35.0% | |
| ATATCCATAACTTCCTGTTG+CGG | - | tig0023338:28584-28603 | Msa1407950:intron | 35.0% | |
| TACCTATAGCCTAGGATTTA+GGG | + | tig0023338:28719-28738 | None:intergenic | 35.0% | |
| TTACCTATAGCCTAGGATTT+AGG | + | tig0023338:28720-28739 | None:intergenic | 35.0% | |
| AAGTAAGATGAACCTATGAC+GGG | + | tig0023338:28842-28861 | None:intergenic | 35.0% | |
| CAAGTAAGATGAACCTATGA+CGG | + | tig0023338:28843-28862 | None:intergenic | 35.0% | |
| AGGTTCATCTTACTTGGTAT+AGG | - | tig0023338:28847-28866 | Msa1407950:intron | 35.0% | |
| GAATCTAAACCGAACGATTA+GGG | - | tig0023338:28972-28991 | Msa1407950:intron | 35.0% | |
| AATCTAAACCGAACGATTAG+GGG | - | tig0023338:28973-28992 | Msa1407950:intron | 35.0% | |
| CGTGCATAAGTTCATTCATT+AGG | - | tig0023338:29151-29170 | Msa1407950:intron | 35.0% | |
| ! | TCTCTTGTTATCCAAATCAG+GGG | + | tig0023338:29349-29368 | None:intergenic | 35.0% |
| ! | GTCTCTTGTTATCCAAATCA+GGG | + | tig0023338:29350-29369 | None:intergenic | 35.0% |
| ! | TGTCTCTTGTTATCCAAATC+AGG | + | tig0023338:29351-29370 | None:intergenic | 35.0% |
| ! | ACACCTACATCTTGTTTACT+CGG | - | tig0023338:29374-29393 | Msa1407950:intron | 35.0% |
| GGTGATTAATGTAATGTAGG+TGG | + | tig0023338:29483-29502 | None:intergenic | 35.0% | |
| GACGGTGATTAATGTAATGT+AGG | + | tig0023338:29486-29505 | None:intergenic | 35.0% | |
| TCATGCTTACATGTTTACCT+CGG | - | tig0023338:29532-29551 | Msa1407950:intron | 35.0% | |
| AAATGATACGATGCGATTTG+GGG | + | tig0023338:29762-29781 | None:intergenic | 35.0% | |
| GAAATGATACGATGCGATTT+GGG | + | tig0023338:29763-29782 | None:intergenic | 35.0% | |
| TGAAATGATACGATGCGATT+TGG | + | tig0023338:29764-29783 | None:intergenic | 35.0% | |
| AAGATCATCATATAGGACCT+TGG | - | tig0023338:29852-29871 | Msa1407950:intron | 35.0% | |
| CAGTCCAGAACTTGTAAAAA+TGG | - | tig0023338:30108-30127 | Msa1407950:intron | 35.0% | |
| !! | GACACTTGGTTTGAAGTTTT+TGG | + | tig0023338:30144-30163 | None:intergenic | 35.0% |
| CCAAAATACTTAGAGACACT+TGG | + | tig0023338:30158-30177 | None:intergenic | 35.0% | |
| ! | CCAAGTGTCTCTAAGTATTT+TGG | - | tig0023338:30155-30174 | Msa1407950:intron | 35.0% |
| TTAGTATGCATGGCAAGAAA+AGG | - | tig0023338:30234-30253 | Msa1407950:intron | 35.0% | |
| TAGTATGCATGGCAAGAAAA+GGG | - | tig0023338:30235-30254 | Msa1407950:intron | 35.0% | |
| AGACATAATCATGATCCCAA+TGG | - | tig0023338:30315-30334 | Msa1407950:intron | 35.0% | |
| GACATAATCATGATCCCAAT+GGG | - | tig0023338:30316-30335 | Msa1407950:intron | 35.0% | |
| ! | GATGCTTCAAGAACTTGTTT+AGG | + | tig0023338:30366-30385 | None:intergenic | 35.0% |
| !! | AGATGGATTGGTTTAAGTCA+AGG | + | tig0023338:30441-30460 | None:intergenic | 35.0% |
| ACCATGATTCTTGATCATGA+AGG | - | tig0023338:30486-30505 | Msa1407950:intron | 35.0% | |
| TCCTTCATGATCAAGAATCA+TGG | + | tig0023338:30490-30509 | None:intergenic | 35.0% | |
| TATCTTGAAGTCAAGAGCTA+GGG | + | tig0023338:30553-30572 | None:intergenic | 35.0% | |
| TTATCTTGAAGTCAAGAGCT+AGG | + | tig0023338:30554-30573 | None:intergenic | 35.0% | |
| !!! | TTGTTGTTTTGGAACTCTTG+TGG | + | tig0023338:30627-30646 | None:intergenic | 35.0% |
| CTCATGATCTTTCAAGCTAA+GGG | + | tig0023338:30744-30763 | None:intergenic | 35.0% | |
| TCTCATGATCTTTCAAGCTA+AGG | + | tig0023338:30745-30764 | None:intergenic | 35.0% | |
| TCCAAAACTTCTTCTATCCT+TGG | + | tig0023338:30788-30807 | None:intergenic | 35.0% | |
| !!! | GGATAGAAGAAGTTTTGGAA+AGG | - | tig0023338:30789-30808 | Msa1407950:intron | 35.0% |
| !!! | GAAGAAGTTTTGGAAAGGTT+TGG | - | tig0023338:30794-30813 | Msa1407950:intron | 35.0% |
| ! | ATTAAACACGTTTAAGGCAG+GGG | + | tig0023338:30977-30996 | None:intergenic | 35.0% |
| ! | GAATTAAACACGTTTAAGGC+AGG | + | tig0023338:30979-30998 | None:intergenic | 35.0% |
| TATTTCGGAAAGGAGGTTAA+AGG | + | tig0023338:31051-31070 | None:intergenic | 35.0% | |
| GGATTAATATTTCGGAAAGG+AGG | + | tig0023338:31058-31077 | None:intergenic | 35.0% | |
| AATATTCTGATACTGACAGG+CGG | - | tig0023338:31096-31115 | Msa1407950:intron | 35.0% | |
| CTACAAGTAAACTGAAATGG+TGG | - | tig0023338:31141-31160 | Msa1407950:CDS | 35.0% | |
| !! | ACTCTAAAGCTCTTGATGTT+GGG | - | tig0023338:31192-31211 | Msa1407950:CDS | 35.0% |
| ! | TCCTTCATGGAAATGTTTTC+AGG | - | tig0023338:31272-31291 | Msa1407950:intron | 35.0% |
| TCCTGAAAACATTTCCATGA+AGG | + | tig0023338:31276-31295 | None:intergenic | 35.0% | |
| !! | GATGTTTGCTTTTGCAATGA+AGG | + | tig0023338:31321-31340 | None:intergenic | 35.0% |
| GTAATAGATTTAGGGACAAG+AGG | + | tig0023338:31505-31524 | None:intergenic | 35.0% | |
| TGGTCAAGTCTCTCCTTATT+TGG | - | tig0023338:27622-27641 | Msa1407950:CDS | 40.0% | |
| AGTGCAGGACTTACCAAATA+AGG | + | tig0023338:27638-27657 | None:intergenic | 40.0% | |
| TGGTGTTCAAATACTAGTGC+AGG | + | tig0023338:27653-27672 | None:intergenic | 40.0% | |
| AGAAACGGGATGTCATCATA+AGG | + | tig0023338:27797-27816 | None:intergenic | 40.0% | |
| GCATTTGAACATTGAGGGTT+TGG | + | tig0023338:27881-27900 | None:intergenic | 40.0% | |
| CAAGCTGCATTTGAACATTG+AGG | + | tig0023338:27887-27906 | None:intergenic | 40.0% | |
| CTTGCTTAAAACGACAGGTA+AGG | - | tig0023338:27903-27922 | Msa1407950:intron | 40.0% | |
| ACATTCTTGCAAAGCCAACA+AGG | - | tig0023338:28021-28040 | Msa1407950:intron | 40.0% | |
| CATTCTTGCAAAGCCAACAA+GGG | - | tig0023338:28022-28041 | Msa1407950:intron | 40.0% | |
| !! | AGCCTCCAATTTTGCTTTTG+CGG | + | tig0023338:28054-28073 | None:intergenic | 40.0% |
| AAAGCAAAATTGGAGGCTGA+AGG | - | tig0023338:28056-28075 | Msa1407950:intron | 40.0% | |
| CATTCGTTATCATCGTGCAA+TGG | + | tig0023338:28101-28120 | None:intergenic | 40.0% | |
| ! | CATTGCACGATGATAACGAA+TGG | - | tig0023338:28099-28118 | Msa1407950:intron | 40.0% |
| ! | CATGTGCGTTAGTTTAGTTC+TGG | - | tig0023338:28447-28466 | Msa1407950:intron | 40.0% |
| TATCCATAACTTCCTGTTGC+GGG | - | tig0023338:28585-28604 | Msa1407950:intron | 40.0% | |
| ATGGTAAGCTAGTAGCTGAA+TGG | + | tig0023338:28636-28655 | None:intergenic | 40.0% | |
| ACCTATAGCCTAGGATTTAG+GGG | + | tig0023338:28718-28737 | None:intergenic | 40.0% | |
| GTGTCTACAATACAACCTGA+CGG | - | tig0023338:28766-28785 | Msa1407950:intron | 40.0% | |
| CGTCATAGGTTCATCTTACT+TGG | - | tig0023338:28841-28860 | Msa1407950:intron | 40.0% | |
| TTCACTTCCTATACGTGTCA+TGG | - | tig0023338:28871-28890 | Msa1407950:intron | 40.0% | |
| TTTACCACCATGACACGTAT+AGG | + | tig0023338:28881-28900 | None:intergenic | 40.0% | |
| TATACGTGTCATGGTGGTAA+AGG | - | tig0023338:28880-28899 | Msa1407950:intron | 40.0% | |
| ATACGTGTCATGGTGGTAAA+GGG | - | tig0023338:28881-28900 | Msa1407950:intron | 40.0% | |
| ! | ATTCTCGACAATGCGGTTTT+AGG | + | tig0023338:28909-28928 | None:intergenic | 40.0% |
| CGAATCTAAACCGAACGATT+AGG | - | tig0023338:28971-28990 | Msa1407950:intron | 40.0% | |
| ! | ATTCATTTTACGGAGAGTCC+CGG | - | tig0023338:29203-29222 | Msa1407950:intron | 40.0% |
| TCATGTATGGGATTGTTCTC+GGG | + | tig0023338:29239-29258 | None:intergenic | 40.0% | |
| GTCATGTATGGGATTGTTCT+CGG | + | tig0023338:29240-29259 | None:intergenic | 40.0% | |
| TACGTACATCGGTCATGTAT+GGG | + | tig0023338:29251-29270 | None:intergenic | 40.0% | |
| TTATCCAAATCAGGGGGATA+CGG | + | tig0023338:29342-29361 | None:intergenic | 40.0% | |
| ! | CTCTTGTTATCCAAATCAGG+GGG | + | tig0023338:29348-29367 | None:intergenic | 40.0% |
| TCACCGAGTAAACAAGATGT+AGG | + | tig0023338:29380-29399 | None:intergenic | 40.0% | |
| AACCTACATGAACGACAAGA+CGG | + | tig0023338:29504-29523 | None:intergenic | 40.0% | |
| !! | ACCTTGATCGATTCGATTAG+CGG | - | tig0023338:29556-29575 | Msa1407950:intron | 40.0% |
| ACTTCGCGTCTTAACATTCT+AGG | - | tig0023338:29657-29676 | Msa1407950:intron | 40.0% | |
| CTTCGCGTCTTAACATTCTA+GGG | - | tig0023338:29658-29677 | Msa1407950:intron | 40.0% | |
| ! | TCATATAGGACCTTGGTTTG+AGG | - | tig0023338:29859-29878 | Msa1407950:intron | 40.0% |
| ! | CATATAGGACCTTGGTTTGA+GGG | - | tig0023338:29860-29879 | Msa1407950:intron | 40.0% |
| ! | ATATAGGACCTTGGTTTGAG+GGG | - | tig0023338:29861-29880 | Msa1407950:intron | 40.0% |
| !!! | AAACCTTGGCATTTTTCGAG+CGG | + | tig0023338:29918-29937 | None:intergenic | 40.0% |
| AGTATGCATGGCAAGAAAAG+GGG | - | tig0023338:30236-30255 | Msa1407950:intron | 40.0% | |
| ATAATCATGATCCCAATGGG+TGG | - | tig0023338:30319-30338 | Msa1407950:intron | 40.0% | |
| TAATCATGATCCCAATGGGT+GGG | - | tig0023338:30320-30339 | Msa1407950:intron | 40.0% | |
| AAGCAAGTGGATCAAAGCTA+GGG | + | tig0023338:30418-30437 | None:intergenic | 40.0% | |
| GTTTAAGTCAAGGAAGCAAG+TGG | + | tig0023338:30431-30450 | None:intergenic | 40.0% | |
| GAAAGAGCAACAAGATGGAT+TGG | + | tig0023338:30453-30472 | None:intergenic | 40.0% | |
| TGCAAGAAAGAGCAACAAGA+TGG | + | tig0023338:30458-30477 | None:intergenic | 40.0% | |
| GATGGAAGATGATTCAAGCT+AGG | + | tig0023338:30515-30534 | None:intergenic | 40.0% | |
| TGGATCGTAACAAGAAGCTA+GGG | + | tig0023338:30656-30675 | None:intergenic | 40.0% | |
| TTGGATCGTAACAAGAAGCT+AGG | + | tig0023338:30657-30676 | None:intergenic | 40.0% | |
| GATTCACTTCTTGAAAGGAG+AGG | - | tig0023338:30690-30709 | Msa1407950:intron | 40.0% | |
| CATAGCTTAGAAGTTTGCCA+AGG | - | tig0023338:30768-30787 | Msa1407950:intron | 40.0% | |
| ! | GCCAAGGATAGAAGAAGTTT+TGG | - | tig0023338:30784-30803 | Msa1407950:intron | 40.0% |
| !!! | GAAGTTTTGGAAAGGTTTGG+TGG | - | tig0023338:30797-30816 | Msa1407950:intron | 40.0% |
| GGCATAAAGGTAATTTCGCA+TGG | + | tig0023338:30956-30975 | None:intergenic | 40.0% | |
| ATATTCTGATACTGACAGGC+GGG | - | tig0023338:31097-31116 | Msa1407950:intron | 40.0% | |
| !! | GACTCTAAAGCTCTTGATGT+TGG | - | tig0023338:31191-31210 | Msa1407950:CDS | 40.0% |
| ! | TGTTTCATCTAGCTCCTTCA+TGG | - | tig0023338:31259-31278 | Msa1407950:intron | 40.0% |
| ! | CAATGAAGGTGCAGTACAAA+AGG | + | tig0023338:31307-31326 | None:intergenic | 40.0% |
| AGACACGAAAGACAATGAAC+TGG | + | tig0023338:31364-31383 | None:intergenic | 40.0% | |
| ATTACAGATTCCCTTCCTGA+AGG | - | tig0023338:31520-31539 | Msa1407950:intron | 40.0% | |
| !! | TTCTGAAATTCATCCGCAGT+AGG | + | tig0023338:31562-31581 | None:intergenic | 40.0% |
| AGGTCATCATTGTCATTGCT+TGG | + | tig0023338:31604-31623 | None:intergenic | 40.0% | |
| TGGTCAAGTCTCTCCTTATT+TGG | - | tig0023338:27622-27641 | Msa1407950:CDS | 40.0% | |
| AGTGCAGGACTTACCAAATA+AGG | + | tig0023338:27638-27657 | None:intergenic | 40.0% | |
| TGGTGTTCAAATACTAGTGC+AGG | + | tig0023338:27653-27672 | None:intergenic | 40.0% | |
| AGAAACGGGATGTCATCATA+AGG | + | tig0023338:27797-27816 | None:intergenic | 40.0% | |
| GCATTTGAACATTGAGGGTT+TGG | + | tig0023338:27881-27900 | None:intergenic | 40.0% | |
| CAAGCTGCATTTGAACATTG+AGG | + | tig0023338:27887-27906 | None:intergenic | 40.0% | |
| CTTGCTTAAAACGACAGGTA+AGG | - | tig0023338:27903-27922 | Msa1407950:intron | 40.0% | |
| ACATTCTTGCAAAGCCAACA+AGG | - | tig0023338:28021-28040 | Msa1407950:intron | 40.0% | |
| CATTCTTGCAAAGCCAACAA+GGG | - | tig0023338:28022-28041 | Msa1407950:intron | 40.0% | |
| !! | AGCCTCCAATTTTGCTTTTG+CGG | + | tig0023338:28054-28073 | None:intergenic | 40.0% |
| AAAGCAAAATTGGAGGCTGA+AGG | - | tig0023338:28056-28075 | Msa1407950:intron | 40.0% | |
| CATTCGTTATCATCGTGCAA+TGG | + | tig0023338:28101-28120 | None:intergenic | 40.0% | |
| ! | CATTGCACGATGATAACGAA+TGG | - | tig0023338:28099-28118 | Msa1407950:intron | 40.0% |
| ! | CATGTGCGTTAGTTTAGTTC+TGG | - | tig0023338:28447-28466 | Msa1407950:intron | 40.0% |
| TATCCATAACTTCCTGTTGC+GGG | - | tig0023338:28585-28604 | Msa1407950:intron | 40.0% | |
| ATGGTAAGCTAGTAGCTGAA+TGG | + | tig0023338:28636-28655 | None:intergenic | 40.0% | |
| ACCTATAGCCTAGGATTTAG+GGG | + | tig0023338:28718-28737 | None:intergenic | 40.0% | |
| GTGTCTACAATACAACCTGA+CGG | - | tig0023338:28766-28785 | Msa1407950:intron | 40.0% | |
| CGTCATAGGTTCATCTTACT+TGG | - | tig0023338:28841-28860 | Msa1407950:intron | 40.0% | |
| TTCACTTCCTATACGTGTCA+TGG | - | tig0023338:28871-28890 | Msa1407950:intron | 40.0% | |
| TTTACCACCATGACACGTAT+AGG | + | tig0023338:28881-28900 | None:intergenic | 40.0% | |
| TATACGTGTCATGGTGGTAA+AGG | - | tig0023338:28880-28899 | Msa1407950:intron | 40.0% | |
| ATACGTGTCATGGTGGTAAA+GGG | - | tig0023338:28881-28900 | Msa1407950:intron | 40.0% | |
| ! | ATTCTCGACAATGCGGTTTT+AGG | + | tig0023338:28909-28928 | None:intergenic | 40.0% |
| CGAATCTAAACCGAACGATT+AGG | - | tig0023338:28971-28990 | Msa1407950:intron | 40.0% | |
| ! | ATTCATTTTACGGAGAGTCC+CGG | - | tig0023338:29203-29222 | Msa1407950:intron | 40.0% |
| TCATGTATGGGATTGTTCTC+GGG | + | tig0023338:29239-29258 | None:intergenic | 40.0% | |
| GTCATGTATGGGATTGTTCT+CGG | + | tig0023338:29240-29259 | None:intergenic | 40.0% | |
| TACGTACATCGGTCATGTAT+GGG | + | tig0023338:29251-29270 | None:intergenic | 40.0% | |
| TTATCCAAATCAGGGGGATA+CGG | + | tig0023338:29342-29361 | None:intergenic | 40.0% | |
| ! | CTCTTGTTATCCAAATCAGG+GGG | + | tig0023338:29348-29367 | None:intergenic | 40.0% |
| TCACCGAGTAAACAAGATGT+AGG | + | tig0023338:29380-29399 | None:intergenic | 40.0% | |
| AACCTACATGAACGACAAGA+CGG | + | tig0023338:29504-29523 | None:intergenic | 40.0% | |
| !! | ACCTTGATCGATTCGATTAG+CGG | - | tig0023338:29556-29575 | Msa1407950:intron | 40.0% |
| ACTTCGCGTCTTAACATTCT+AGG | - | tig0023338:29657-29676 | Msa1407950:intron | 40.0% | |
| CTTCGCGTCTTAACATTCTA+GGG | - | tig0023338:29658-29677 | Msa1407950:intron | 40.0% | |
| ! | TCATATAGGACCTTGGTTTG+AGG | - | tig0023338:29859-29878 | Msa1407950:intron | 40.0% |
| ! | CATATAGGACCTTGGTTTGA+GGG | - | tig0023338:29860-29879 | Msa1407950:intron | 40.0% |
| ! | ATATAGGACCTTGGTTTGAG+GGG | - | tig0023338:29861-29880 | Msa1407950:intron | 40.0% |
| !!! | AAACCTTGGCATTTTTCGAG+CGG | + | tig0023338:29918-29937 | None:intergenic | 40.0% |
| AGTATGCATGGCAAGAAAAG+GGG | - | tig0023338:30236-30255 | Msa1407950:intron | 40.0% | |
| ATAATCATGATCCCAATGGG+TGG | - | tig0023338:30319-30338 | Msa1407950:intron | 40.0% | |
| TAATCATGATCCCAATGGGT+GGG | - | tig0023338:30320-30339 | Msa1407950:intron | 40.0% | |
| AAGCAAGTGGATCAAAGCTA+GGG | + | tig0023338:30418-30437 | None:intergenic | 40.0% | |
| GTTTAAGTCAAGGAAGCAAG+TGG | + | tig0023338:30431-30450 | None:intergenic | 40.0% | |
| GAAAGAGCAACAAGATGGAT+TGG | + | tig0023338:30453-30472 | None:intergenic | 40.0% | |
| TGCAAGAAAGAGCAACAAGA+TGG | + | tig0023338:30458-30477 | None:intergenic | 40.0% | |
| GATGGAAGATGATTCAAGCT+AGG | + | tig0023338:30515-30534 | None:intergenic | 40.0% | |
| TGGATCGTAACAAGAAGCTA+GGG | + | tig0023338:30656-30675 | None:intergenic | 40.0% | |
| TTGGATCGTAACAAGAAGCT+AGG | + | tig0023338:30657-30676 | None:intergenic | 40.0% | |
| GATTCACTTCTTGAAAGGAG+AGG | - | tig0023338:30690-30709 | Msa1407950:intron | 40.0% | |
| CATAGCTTAGAAGTTTGCCA+AGG | - | tig0023338:30768-30787 | Msa1407950:intron | 40.0% | |
| ! | GCCAAGGATAGAAGAAGTTT+TGG | - | tig0023338:30784-30803 | Msa1407950:intron | 40.0% |
| !!! | GAAGTTTTGGAAAGGTTTGG+TGG | - | tig0023338:30797-30816 | Msa1407950:intron | 40.0% |
| GGCATAAAGGTAATTTCGCA+TGG | + | tig0023338:30956-30975 | None:intergenic | 40.0% | |
| ATATTCTGATACTGACAGGC+GGG | - | tig0023338:31097-31116 | Msa1407950:intron | 40.0% | |
| !! | GACTCTAAAGCTCTTGATGT+TGG | - | tig0023338:31191-31210 | Msa1407950:CDS | 40.0% |
| ! | TGTTTCATCTAGCTCCTTCA+TGG | - | tig0023338:31259-31278 | Msa1407950:intron | 40.0% |
| ! | CAATGAAGGTGCAGTACAAA+AGG | + | tig0023338:31307-31326 | None:intergenic | 40.0% |
| AGACACGAAAGACAATGAAC+TGG | + | tig0023338:31364-31383 | None:intergenic | 40.0% | |
| ATTACAGATTCCCTTCCTGA+AGG | - | tig0023338:31520-31539 | Msa1407950:intron | 40.0% | |
| !! | TTCTGAAATTCATCCGCAGT+AGG | + | tig0023338:31562-31581 | None:intergenic | 40.0% |
| AGGTCATCATTGTCATTGCT+TGG | + | tig0023338:31604-31623 | None:intergenic | 40.0% | |
| ATGAGACCACCATGATTGGT+AGG | - | tig0023338:27761-27780 | Msa1407950:intron | 45.0% | |
| ! | TGCAGCTTGCTTAAAACGAC+AGG | - | tig0023338:27898-27917 | Msa1407950:intron | 45.0% |
| TCATAAAATCATGCGCAGCG+TGG | + | tig0023338:27942-27961 | None:intergenic | 45.0% | |
| TGCTGCCGCAAAAGCAAAAT+TGG | - | tig0023338:28046-28065 | Msa1407950:intron | 45.0% | |
| TGCCGCAAAAGCAAAATTGG+AGG | - | tig0023338:28049-28068 | Msa1407950:intron | 45.0% | |
| TTAGCCGTCACATTTACTGG+CGG | - | tig0023338:28271-28290 | Msa1407950:intron | 45.0% | |
| AAAGCCGCCAGTAAATGTGA+CGG | + | tig0023338:28278-28297 | None:intergenic | 45.0% | |
| AGTGAGTTCCCCTAAATCCT+AGG | - | tig0023338:28707-28726 | Msa1407950:intron | 45.0% | |
| TCCCCTAAATCCTAGGCTAT+AGG | - | tig0023338:28714-28733 | Msa1407950:intron | 45.0% | |
| ! | TCTGAGGTTACCTATAGCCT+AGG | + | tig0023338:28727-28746 | None:intergenic | 45.0% |
| TAGGCTATAGGTAACCTCAG+AGG | - | tig0023338:28726-28745 | Msa1407950:intron | 45.0% | |
| GTAACCTCAGAGGAAACCTA+CGG | - | tig0023338:28736-28755 | Msa1407950:intron | 45.0% | |
| CAGGTTGTATTGTAGACACG+TGG | + | tig0023338:28765-28784 | None:intergenic | 45.0% | |
| CACACGTATAATCAACCGTC+AGG | + | tig0023338:28784-28803 | None:intergenic | 45.0% | |
| GACGGTTGATTATACGTGTG+TGG | - | tig0023338:28784-28803 | Msa1407950:intron | 45.0% | |
| TGTGGTCATGCTTTCCTAGA+CGG | - | tig0023338:28802-28821 | Msa1407950:intron | 45.0% | |
| ACTTCCTATACGTGTCATGG+TGG | - | tig0023338:28874-28893 | Msa1407950:intron | 45.0% | |
| AGAGCGTATTCTCGACAATG+CGG | + | tig0023338:28916-28935 | None:intergenic | 45.0% | |
| AGAATACGCTCTACGTATCG+AGG | - | tig0023338:28924-28943 | Msa1407950:intron | 45.0% | |
| TTAGGTCTCCCCTAATCGTT+CGG | + | tig0023338:28984-29003 | None:intergenic | 45.0% | |
| ATGATACCGATGACGACCTT+AGG | + | tig0023338:29002-29021 | None:intergenic | 45.0% | |
| ! | TTCATTTTACGGAGAGTCCC+GGG | - | tig0023338:29204-29223 | Msa1407950:intron | 45.0% |
| CATGTATGGGATTGTTCTCG+GGG | + | tig0023338:29238-29257 | None:intergenic | 45.0% | |
| GTACGTACATCGGTCATGTA+TGG | + | tig0023338:29252-29271 | None:intergenic | 45.0% | |
| CATGACCGATGTACGTACAT+CGG | - | tig0023338:29254-29273 | Msa1407950:intron | 45.0% | |
| TATCCAAATCAGGGGGATAC+GGG | + | tig0023338:29341-29360 | None:intergenic | 45.0% | |
| ! | CTTGTTTACTCGGTGACATG+CGG | - | tig0023338:29384-29403 | Msa1407950:intron | 45.0% |
| ! | TTGTTTACTCGGTGACATGC+GGG | - | tig0023338:29385-29404 | Msa1407950:intron | 45.0% |
| GAGAACGATTCAAGCCGTAA+GGG | + | tig0023338:29412-29431 | None:intergenic | 45.0% | |
| TGAGAACGATTCAAGCCGTA+AGG | + | tig0023338:29413-29432 | None:intergenic | 45.0% | |
| TCTCTTGGTATCCACACTAG+GGG | + | tig0023338:29456-29475 | None:intergenic | 45.0% | |
| GTCTCTTGGTATCCACACTA+GGG | + | tig0023338:29457-29476 | None:intergenic | 45.0% | |
| TGTCTCTTGGTATCCACACT+AGG | + | tig0023338:29458-29477 | None:intergenic | 45.0% | |
| ACCGCTAATCGAATCGATCA+AGG | + | tig0023338:29560-29579 | None:intergenic | 45.0% | |
| GTTCTCGACTAACTATGTCG+AGG | - | tig0023338:29699-29718 | Msa1407950:intron | 45.0% | |
| AAAGAGAACCCCTCAAACCA+AGG | + | tig0023338:29872-29891 | None:intergenic | 45.0% | |
| ATTCCGCTCGAAAAATGCCA+AGG | - | tig0023338:29912-29931 | Msa1407950:intron | 45.0% | |
| CGAAAAATGCCAAGGTTTGC+CGG | - | tig0023338:29920-29939 | Msa1407950:intron | 45.0% | |
| AGATAGTTCTCCCACCCATT+GGG | + | tig0023338:30333-30352 | None:intergenic | 45.0% | |
| TAGATAGTTCTCCCACCCAT+TGG | + | tig0023338:30334-30353 | None:intergenic | 45.0% | |
| ATGGGTGGGAGAACTATCTA+TGG | - | tig0023338:30334-30353 | Msa1407950:intron | 45.0% | |
| !!! | GCTAGGGTTTTGGCTTGTTT+GGG | + | tig0023338:30402-30421 | None:intergenic | 45.0% |
| !!! | AGCTAGGGTTTTGGCTTGTT+TGG | + | tig0023338:30403-30422 | None:intergenic | 45.0% |
| ! | GTGGATCAAAGCTAGGGTTT+TGG | + | tig0023338:30412-30431 | None:intergenic | 45.0% |
| GAAGCAAGTGGATCAAAGCT+AGG | + | tig0023338:30419-30438 | None:intergenic | 45.0% | |
| ! | GGGTTTGGTTCATGGTAAGA+TGG | + | tig0023338:30533-30552 | None:intergenic | 45.0% |
| ! | AAGAGCTAGGGTTTGGTTCA+TGG | + | tig0023338:30541-30560 | None:intergenic | 45.0% |
| TGAAGTCAAGAGCTAGGGTT+TGG | + | tig0023338:30548-30567 | None:intergenic | 45.0% | |
| GTGGAGAGATGAGAGAAAGA+GGG | - | tig0023338:30816-30835 | Msa1407950:intron | 45.0% | |
| TGGGAGAAGAGAAGAGAGAA+GGG | - | tig0023338:30841-30860 | Msa1407950:intron | 45.0% | |
| !! | TCTCTCTCTAGGACTTGAGT+TGG | + | tig0023338:30876-30895 | None:intergenic | 45.0% |
| TATCCTCTCTCTCTCTCTCT+AGG | + | tig0023338:30887-30906 | None:intergenic | 45.0% | |
| AGAGAGAGAGAGAGAGGATA+AGG | - | tig0023338:30887-30906 | Msa1407950:intron | 45.0% | |
| ATTACAGTCGATCGTGTCAG+AGG | + | tig0023338:31079-31098 | None:intergenic | 45.0% | |
| ! | TCTTTTGAGCTACATGGGCT+TGG | - | tig0023338:31224-31243 | Msa1407950:intron | 45.0% |
| ATGAGTGAGACCTTCAGGAA+GGG | + | tig0023338:31533-31552 | None:intergenic | 45.0% | |
| AGTTCATGAGTGAGACCTTC+AGG | + | tig0023338:31538-31557 | None:intergenic | 45.0% | |
| CACTCATGAACTTCCTACTG+CGG | - | tig0023338:31546-31565 | Msa1407950:intron | 45.0% | |
| TTGTCATTGCTTGGAGCTTC+AGG | + | tig0023338:31595-31614 | None:intergenic | 45.0% | |
| ATGACCTTGACGAACTACGA+AGG | - | tig0023338:31617-31636 | Msa1407950:five_prime_UTR | 45.0% | |
| ATGAGACCACCATGATTGGT+AGG | - | tig0023338:27761-27780 | Msa1407950:intron | 45.0% | |
| ! | TGCAGCTTGCTTAAAACGAC+AGG | - | tig0023338:27898-27917 | Msa1407950:intron | 45.0% |
| TCATAAAATCATGCGCAGCG+TGG | + | tig0023338:27942-27961 | None:intergenic | 45.0% | |
| TGCTGCCGCAAAAGCAAAAT+TGG | - | tig0023338:28046-28065 | Msa1407950:intron | 45.0% | |
| TGCCGCAAAAGCAAAATTGG+AGG | - | tig0023338:28049-28068 | Msa1407950:intron | 45.0% | |
| TTAGCCGTCACATTTACTGG+CGG | - | tig0023338:28271-28290 | Msa1407950:intron | 45.0% | |
| AAAGCCGCCAGTAAATGTGA+CGG | + | tig0023338:28278-28297 | None:intergenic | 45.0% | |
| AGTGAGTTCCCCTAAATCCT+AGG | - | tig0023338:28707-28726 | Msa1407950:intron | 45.0% | |
| TCCCCTAAATCCTAGGCTAT+AGG | - | tig0023338:28714-28733 | Msa1407950:intron | 45.0% | |
| ! | TCTGAGGTTACCTATAGCCT+AGG | + | tig0023338:28727-28746 | None:intergenic | 45.0% |
| TAGGCTATAGGTAACCTCAG+AGG | - | tig0023338:28726-28745 | Msa1407950:intron | 45.0% | |
| GTAACCTCAGAGGAAACCTA+CGG | - | tig0023338:28736-28755 | Msa1407950:intron | 45.0% | |
| CAGGTTGTATTGTAGACACG+TGG | + | tig0023338:28765-28784 | None:intergenic | 45.0% | |
| CACACGTATAATCAACCGTC+AGG | + | tig0023338:28784-28803 | None:intergenic | 45.0% | |
| GACGGTTGATTATACGTGTG+TGG | - | tig0023338:28784-28803 | Msa1407950:intron | 45.0% | |
| TGTGGTCATGCTTTCCTAGA+CGG | - | tig0023338:28802-28821 | Msa1407950:intron | 45.0% | |
| ACTTCCTATACGTGTCATGG+TGG | - | tig0023338:28874-28893 | Msa1407950:intron | 45.0% | |
| AGAGCGTATTCTCGACAATG+CGG | + | tig0023338:28916-28935 | None:intergenic | 45.0% | |
| AGAATACGCTCTACGTATCG+AGG | - | tig0023338:28924-28943 | Msa1407950:intron | 45.0% | |
| TTAGGTCTCCCCTAATCGTT+CGG | + | tig0023338:28984-29003 | None:intergenic | 45.0% | |
| ATGATACCGATGACGACCTT+AGG | + | tig0023338:29002-29021 | None:intergenic | 45.0% | |
| ! | TTCATTTTACGGAGAGTCCC+GGG | - | tig0023338:29204-29223 | Msa1407950:intron | 45.0% |
| CATGTATGGGATTGTTCTCG+GGG | + | tig0023338:29238-29257 | None:intergenic | 45.0% | |
| GTACGTACATCGGTCATGTA+TGG | + | tig0023338:29252-29271 | None:intergenic | 45.0% | |
| CATGACCGATGTACGTACAT+CGG | - | tig0023338:29254-29273 | Msa1407950:intron | 45.0% | |
| TATCCAAATCAGGGGGATAC+GGG | + | tig0023338:29341-29360 | None:intergenic | 45.0% | |
| ! | CTTGTTTACTCGGTGACATG+CGG | - | tig0023338:29384-29403 | Msa1407950:intron | 45.0% |
| ! | TTGTTTACTCGGTGACATGC+GGG | - | tig0023338:29385-29404 | Msa1407950:intron | 45.0% |
| GAGAACGATTCAAGCCGTAA+GGG | + | tig0023338:29412-29431 | None:intergenic | 45.0% | |
| TGAGAACGATTCAAGCCGTA+AGG | + | tig0023338:29413-29432 | None:intergenic | 45.0% | |
| TCTCTTGGTATCCACACTAG+GGG | + | tig0023338:29456-29475 | None:intergenic | 45.0% | |
| GTCTCTTGGTATCCACACTA+GGG | + | tig0023338:29457-29476 | None:intergenic | 45.0% | |
| TGTCTCTTGGTATCCACACT+AGG | + | tig0023338:29458-29477 | None:intergenic | 45.0% | |
| ACCGCTAATCGAATCGATCA+AGG | + | tig0023338:29560-29579 | None:intergenic | 45.0% | |
| GTTCTCGACTAACTATGTCG+AGG | - | tig0023338:29699-29718 | Msa1407950:intron | 45.0% | |
| AAAGAGAACCCCTCAAACCA+AGG | + | tig0023338:29872-29891 | None:intergenic | 45.0% | |
| ATTCCGCTCGAAAAATGCCA+AGG | - | tig0023338:29912-29931 | Msa1407950:intron | 45.0% | |
| CGAAAAATGCCAAGGTTTGC+CGG | - | tig0023338:29920-29939 | Msa1407950:intron | 45.0% | |
| AGATAGTTCTCCCACCCATT+GGG | + | tig0023338:30333-30352 | None:intergenic | 45.0% | |
| TAGATAGTTCTCCCACCCAT+TGG | + | tig0023338:30334-30353 | None:intergenic | 45.0% | |
| ATGGGTGGGAGAACTATCTA+TGG | - | tig0023338:30334-30353 | Msa1407950:intron | 45.0% | |
| !!! | GCTAGGGTTTTGGCTTGTTT+GGG | + | tig0023338:30402-30421 | None:intergenic | 45.0% |
| !!! | AGCTAGGGTTTTGGCTTGTT+TGG | + | tig0023338:30403-30422 | None:intergenic | 45.0% |
| ! | GTGGATCAAAGCTAGGGTTT+TGG | + | tig0023338:30412-30431 | None:intergenic | 45.0% |
| GAAGCAAGTGGATCAAAGCT+AGG | + | tig0023338:30419-30438 | None:intergenic | 45.0% | |
| ! | GGGTTTGGTTCATGGTAAGA+TGG | + | tig0023338:30533-30552 | None:intergenic | 45.0% |
| ! | AAGAGCTAGGGTTTGGTTCA+TGG | + | tig0023338:30541-30560 | None:intergenic | 45.0% |
| TGAAGTCAAGAGCTAGGGTT+TGG | + | tig0023338:30548-30567 | None:intergenic | 45.0% | |
| GTGGAGAGATGAGAGAAAGA+GGG | - | tig0023338:30816-30835 | Msa1407950:intron | 45.0% | |
| TGGGAGAAGAGAAGAGAGAA+GGG | - | tig0023338:30841-30860 | Msa1407950:intron | 45.0% | |
| !! | TCTCTCTCTAGGACTTGAGT+TGG | + | tig0023338:30876-30895 | None:intergenic | 45.0% |
| TATCCTCTCTCTCTCTCTCT+AGG | + | tig0023338:30887-30906 | None:intergenic | 45.0% | |
| AGAGAGAGAGAGAGAGGATA+AGG | - | tig0023338:30887-30906 | Msa1407950:intron | 45.0% | |
| ATTACAGTCGATCGTGTCAG+AGG | + | tig0023338:31079-31098 | None:intergenic | 45.0% | |
| ! | TCTTTTGAGCTACATGGGCT+TGG | - | tig0023338:31224-31243 | Msa1407950:intron | 45.0% |
| ATGAGTGAGACCTTCAGGAA+GGG | + | tig0023338:31533-31552 | None:intergenic | 45.0% | |
| AGTTCATGAGTGAGACCTTC+AGG | + | tig0023338:31538-31557 | None:intergenic | 45.0% | |
| CACTCATGAACTTCCTACTG+CGG | - | tig0023338:31546-31565 | Msa1407950:intron | 45.0% | |
| TTGTCATTGCTTGGAGCTTC+AGG | + | tig0023338:31595-31614 | None:intergenic | 45.0% | |
| ATGACCTTGACGAACTACGA+AGG | - | tig0023338:31617-31636 | Msa1407950:five_prime_UTR | 45.0% | |
| CCAATCATGGTGGTCTCATC+TGG | + | tig0023338:27760-27779 | None:intergenic | 50.0% | |
| CCAGATGAGACCACCATGAT+TGG | - | tig0023338:27757-27776 | Msa1407950:intron | 50.0% | |
| !! | GTTGATGGTTGTGAGCCAGA+TGG | - | tig0023338:28316-28335 | Msa1407950:intron | 50.0% |
| GTACCCGCAACAGGAAGTTA+TGG | + | tig0023338:28591-28610 | None:intergenic | 50.0% | |
| TCTAGCATGCACTTCCGTCT+AGG | + | tig0023338:28819-28838 | None:intergenic | 50.0% | |
| GAACGATTAGGGGAGACCTA+AGG | - | tig0023338:28983-29002 | Msa1407950:intron | 50.0% | |
| GGAGTCCGATGTACGTACAT+CGG | + | tig0023338:29262-29281 | None:intergenic | 50.0% | |
| GGGAACAGTTCAAGCCGTAA+GGG | + | tig0023338:29302-29321 | None:intergenic | 50.0% | |
| TCCACACTAGGGGGATACAA+GGG | + | tig0023338:29446-29465 | None:intergenic | 50.0% | |
| ATCCACACTAGGGGGATACA+AGG | + | tig0023338:29447-29466 | None:intergenic | 50.0% | |
| CTCTTGGTATCCACACTAGG+GGG | + | tig0023338:29455-29474 | None:intergenic | 50.0% | |
| AATGTAGGTGGCGTGTCTCT+TGG | + | tig0023338:29471-29490 | None:intergenic | 50.0% | |
| CACCGTCTTGTCGTTCATGT+AGG | - | tig0023338:29499-29518 | Msa1407950:intron | 50.0% | |
| TCGAATCGATCAAGGTTCCG+AGG | + | tig0023338:29552-29571 | None:intergenic | 50.0% | |
| !! | ACACATGGTTTGCTCGCTTC+CGG | + | tig0023338:29942-29961 | None:intergenic | 50.0% |
| GCAAACTGTGTGGACACACA+TGG | + | tig0023338:29957-29976 | None:intergenic | 50.0% | |
| CCATGGCGAGTAACCTTACT+GGG | - | tig0023338:29980-29999 | Msa1407950:intron | 50.0% | |
| CATGGCGAGTAACCTTACTG+GGG | - | tig0023338:29981-30000 | Msa1407950:intron | 50.0% | |
| !!! | GGTTTTGGCTTGTTTGGGCT+TGG | + | tig0023338:30397-30416 | None:intergenic | 50.0% |
| CTTCTTGAAAGGAGAGGTCG+AGG | - | tig0023338:30696-30715 | Msa1407950:intron | 50.0% | |
| GGTGGAGAGATGAGAGAAAG+AGG | - | tig0023338:30815-30834 | Msa1407950:intron | 50.0% | |
| ! | AGATGAGAGAAAGAGGGCGT+GGG | - | tig0023338:30822-30841 | Msa1407950:intron | 50.0% |
| GTGGGAGAAGAGAAGAGAGA+AGG | - | tig0023338:30840-30859 | Msa1407950:intron | 50.0% | |
| AGTCCTAGAGAGAGAGAGAG+AGG | - | tig0023338:30881-30900 | Msa1407950:intron | 50.0% | |
| ! | CGTTTAAGGCAGGGGCATAA+AGG | + | tig0023338:30969-30988 | None:intergenic | 50.0% |
| ACTGACAGGCGGGATATTAC+AGG | - | tig0023338:31107-31126 | Msa1407950:intron | 50.0% | |
| CATGAGTGAGACCTTCAGGA+AGG | + | tig0023338:31534-31553 | None:intergenic | 50.0% | |
| TTGGAGCTTCAGGAGTGACT+AGG | + | tig0023338:31585-31604 | None:intergenic | 50.0% | |
| GTTGCCTTCGTAGTTCGTCA+AGG | + | tig0023338:31624-31643 | None:intergenic | 50.0% | |
| CCAATCATGGTGGTCTCATC+TGG | + | tig0023338:27760-27779 | None:intergenic | 50.0% | |
| CCAGATGAGACCACCATGAT+TGG | - | tig0023338:27757-27776 | Msa1407950:intron | 50.0% | |
| !! | GTTGATGGTTGTGAGCCAGA+TGG | - | tig0023338:28316-28335 | Msa1407950:intron | 50.0% |
| GTACCCGCAACAGGAAGTTA+TGG | + | tig0023338:28591-28610 | None:intergenic | 50.0% | |
| TCTAGCATGCACTTCCGTCT+AGG | + | tig0023338:28819-28838 | None:intergenic | 50.0% | |
| GAACGATTAGGGGAGACCTA+AGG | - | tig0023338:28983-29002 | Msa1407950:intron | 50.0% | |
| GGAGTCCGATGTACGTACAT+CGG | + | tig0023338:29262-29281 | None:intergenic | 50.0% | |
| GGGAACAGTTCAAGCCGTAA+GGG | + | tig0023338:29302-29321 | None:intergenic | 50.0% | |
| TCCACACTAGGGGGATACAA+GGG | + | tig0023338:29446-29465 | None:intergenic | 50.0% | |
| ATCCACACTAGGGGGATACA+AGG | + | tig0023338:29447-29466 | None:intergenic | 50.0% | |
| CTCTTGGTATCCACACTAGG+GGG | + | tig0023338:29455-29474 | None:intergenic | 50.0% | |
| AATGTAGGTGGCGTGTCTCT+TGG | + | tig0023338:29471-29490 | None:intergenic | 50.0% | |
| CACCGTCTTGTCGTTCATGT+AGG | - | tig0023338:29499-29518 | Msa1407950:intron | 50.0% | |
| TCGAATCGATCAAGGTTCCG+AGG | + | tig0023338:29552-29571 | None:intergenic | 50.0% | |
| !! | ACACATGGTTTGCTCGCTTC+CGG | + | tig0023338:29942-29961 | None:intergenic | 50.0% |
| GCAAACTGTGTGGACACACA+TGG | + | tig0023338:29957-29976 | None:intergenic | 50.0% | |
| CCATGGCGAGTAACCTTACT+GGG | - | tig0023338:29980-29999 | Msa1407950:intron | 50.0% | |
| CATGGCGAGTAACCTTACTG+GGG | - | tig0023338:29981-30000 | Msa1407950:intron | 50.0% | |
| !!! | GGTTTTGGCTTGTTTGGGCT+TGG | + | tig0023338:30397-30416 | None:intergenic | 50.0% |
| CTTCTTGAAAGGAGAGGTCG+AGG | - | tig0023338:30696-30715 | Msa1407950:intron | 50.0% | |
| GGTGGAGAGATGAGAGAAAG+AGG | - | tig0023338:30815-30834 | Msa1407950:intron | 50.0% | |
| ! | AGATGAGAGAAAGAGGGCGT+GGG | - | tig0023338:30822-30841 | Msa1407950:intron | 50.0% |
| GTGGGAGAAGAGAAGAGAGA+AGG | - | tig0023338:30840-30859 | Msa1407950:intron | 50.0% | |
| AGTCCTAGAGAGAGAGAGAG+AGG | - | tig0023338:30881-30900 | Msa1407950:intron | 50.0% | |
| ! | CGTTTAAGGCAGGGGCATAA+AGG | + | tig0023338:30969-30988 | None:intergenic | 50.0% |
| ACTGACAGGCGGGATATTAC+AGG | - | tig0023338:31107-31126 | Msa1407950:intron | 50.0% | |
| CATGAGTGAGACCTTCAGGA+AGG | + | tig0023338:31534-31553 | None:intergenic | 50.0% | |
| TTGGAGCTTCAGGAGTGACT+AGG | + | tig0023338:31585-31604 | None:intergenic | 50.0% | |
| GTTGCCTTCGTAGTTCGTCA+AGG | + | tig0023338:31624-31643 | None:intergenic | 50.0% | |
| TTTGCGGCAGCATCCCTTGT+TGG | + | tig0023338:28038-28057 | None:intergenic | 55.0% | |
| TGATCGTTCGTACCCGCAAC+AGG | + | tig0023338:28600-28619 | None:intergenic | 55.0% | |
| GTGACCGTAGGTTTCCTCTG+AGG | + | tig0023338:28743-28762 | None:intergenic | 55.0% | |
| TGTAGACACGTGGTGACCGT+AGG | + | tig0023338:28755-28774 | None:intergenic | 55.0% | |
| GTGCATGCTAGACCCGTCAT+AGG | - | tig0023338:28827-28846 | Msa1407950:intron | 55.0% | |
| GGGAGACCTAAGGTCGTCAT+CGG | - | tig0023338:28993-29012 | Msa1407950:intron | 55.0% | |
| ! | ATTTTACGGAGAGTCCCGGG+TGG | - | tig0023338:29207-29226 | Msa1407950:intron | 55.0% |
| GTACGTACATCGGACTCCCT+CGG | - | tig0023338:29264-29283 | Msa1407950:intron | 55.0% | |
| GGGGAACAGTTCAAGCCGTA+AGG | + | tig0023338:29303-29322 | None:intergenic | 55.0% | |
| ACGGGAGGTTCTCGACTCAA+GGG | + | tig0023338:29323-29342 | None:intergenic | 55.0% | |
| TACGGGAGGTTCTCGACTCA+AGG | + | tig0023338:29324-29343 | None:intergenic | 55.0% | |
| CCACACTAGGGGGATACAAG+GGG | + | tig0023338:29445-29464 | None:intergenic | 55.0% | |
| ! | TCCACACAGTTTGCTCGCCA+TGG | - | tig0023338:29963-29982 | Msa1407950:intron | 55.0% |
| GCCATGGCGAGTAACCTTAC+TGG | - | tig0023338:29979-29998 | Msa1407950:intron | 55.0% | |
| CCCAGTAAGGTTACTCGCCA+TGG | + | tig0023338:29983-30002 | None:intergenic | 55.0% | |
| AACAGCTTGCCATGGCGAGT+TGG | - | tig0023338:30012-30031 | Msa1407950:intron | 55.0% | |
| CTGCTCCTTTCTGCTCGTTG+TGG | - | tig0023338:30055-30074 | Msa1407950:intron | 55.0% | |
| ACTCGCCACAACGAGCAGAA+AGG | + | tig0023338:30063-30082 | None:intergenic | 55.0% | |
| TGGCGAGTAATAGCTCGCTG+TGG | - | tig0023338:30075-30094 | Msa1407950:intron | 55.0% | |
| GAGATGAGAGAAAGAGGGCG+TGG | - | tig0023338:30821-30840 | Msa1407950:intron | 55.0% | |
| TTTGCGGCAGCATCCCTTGT+TGG | + | tig0023338:28038-28057 | None:intergenic | 55.0% | |
| TGATCGTTCGTACCCGCAAC+AGG | + | tig0023338:28600-28619 | None:intergenic | 55.0% | |
| GTGACCGTAGGTTTCCTCTG+AGG | + | tig0023338:28743-28762 | None:intergenic | 55.0% | |
| TGTAGACACGTGGTGACCGT+AGG | + | tig0023338:28755-28774 | None:intergenic | 55.0% | |
| GTGCATGCTAGACCCGTCAT+AGG | - | tig0023338:28827-28846 | Msa1407950:intron | 55.0% | |
| GGGAGACCTAAGGTCGTCAT+CGG | - | tig0023338:28993-29012 | Msa1407950:intron | 55.0% | |
| ! | ATTTTACGGAGAGTCCCGGG+TGG | - | tig0023338:29207-29226 | Msa1407950:intron | 55.0% |
| GTACGTACATCGGACTCCCT+CGG | - | tig0023338:29264-29283 | Msa1407950:intron | 55.0% | |
| GGGGAACAGTTCAAGCCGTA+AGG | + | tig0023338:29303-29322 | None:intergenic | 55.0% | |
| ACGGGAGGTTCTCGACTCAA+GGG | + | tig0023338:29323-29342 | None:intergenic | 55.0% | |
| TACGGGAGGTTCTCGACTCA+AGG | + | tig0023338:29324-29343 | None:intergenic | 55.0% | |
| CCACACTAGGGGGATACAAG+GGG | + | tig0023338:29445-29464 | None:intergenic | 55.0% | |
| ! | TCCACACAGTTTGCTCGCCA+TGG | - | tig0023338:29963-29982 | Msa1407950:intron | 55.0% |
| GCCATGGCGAGTAACCTTAC+TGG | - | tig0023338:29979-29998 | Msa1407950:intron | 55.0% | |
| CCCAGTAAGGTTACTCGCCA+TGG | + | tig0023338:29983-30002 | None:intergenic | 55.0% | |
| AACAGCTTGCCATGGCGAGT+TGG | - | tig0023338:30012-30031 | Msa1407950:intron | 55.0% | |
| CTGCTCCTTTCTGCTCGTTG+TGG | - | tig0023338:30055-30074 | Msa1407950:intron | 55.0% | |
| ACTCGCCACAACGAGCAGAA+AGG | + | tig0023338:30063-30082 | None:intergenic | 55.0% | |
| TGGCGAGTAATAGCTCGCTG+TGG | - | tig0023338:30075-30094 | Msa1407950:intron | 55.0% | |
| GAGATGAGAGAAAGAGGGCG+TGG | - | tig0023338:30821-30840 | Msa1407950:intron | 55.0% | |
| TTCTCGGGGTTACTCCACCC+GGG | + | tig0023338:29224-29243 | None:intergenic | 60.0% | |
| GTTCTCGGGGTTACTCCACC+CGG | + | tig0023338:29225-29244 | None:intergenic | 60.0% | |
| ! | GGTGTCGTGCAGGTCCCTTA+CGG | - | tig0023338:29285-29304 | Msa1407950:intron | 60.0% |
| CGGGAGGTTCTCGACTCAAG+GGG | + | tig0023338:29322-29341 | None:intergenic | 60.0% | |
| CCAAATCAGGGGGATACGGG+AGG | + | tig0023338:29338-29357 | None:intergenic | 60.0% | |
| CCTCCCGTATCCCCCTGATT+TGG | - | tig0023338:29335-29354 | Msa1407950:intron | 60.0% | |
| GGTGACATGCGGGTCCCTTA+CGG | - | tig0023338:29395-29414 | Msa1407950:intron | 60.0% | |
| CCCCTTGTATCCCCCTAGTG+TGG | - | tig0023338:29442-29461 | Msa1407950:intron | 60.0% | |
| TGCTCGCTTCCGGCAAACCT+TGG | + | tig0023338:29932-29951 | None:intergenic | 60.0% | |
| GCCATGGCGAGCAAACTGTG+TGG | + | tig0023338:29967-29986 | None:intergenic | 60.0% | |
| GGCGAGTAACCTTACTGGGG+AGG | - | tig0023338:29984-30003 | Msa1407950:intron | 60.0% | |
| TGTTGCTCGCCTCCCCAGTA+AGG | + | tig0023338:29996-30015 | None:intergenic | 60.0% | |
| AGGCGAGCAACAGCTTGCCA+TGG | - | tig0023338:30004-30023 | Msa1407950:intron | 60.0% | |
| ! | AGCTTGCCATGGCGAGTTGG+AGG | - | tig0023338:30015-30034 | Msa1407950:intron | 60.0% |
| TGCTCACCTCCAACTCGCCA+TGG | + | tig0023338:30024-30043 | None:intergenic | 60.0% | |
| TTCTCGGGGTTACTCCACCC+GGG | + | tig0023338:29224-29243 | None:intergenic | 60.0% | |
| GTTCTCGGGGTTACTCCACC+CGG | + | tig0023338:29225-29244 | None:intergenic | 60.0% | |
| ! | GGTGTCGTGCAGGTCCCTTA+CGG | - | tig0023338:29285-29304 | Msa1407950:intron | 60.0% |
| CGGGAGGTTCTCGACTCAAG+GGG | + | tig0023338:29322-29341 | None:intergenic | 60.0% | |
| CCAAATCAGGGGGATACGGG+AGG | + | tig0023338:29338-29357 | None:intergenic | 60.0% | |
| CCTCCCGTATCCCCCTGATT+TGG | - | tig0023338:29335-29354 | Msa1407950:intron | 60.0% | |
| GGTGACATGCGGGTCCCTTA+CGG | - | tig0023338:29395-29414 | Msa1407950:intron | 60.0% | |
| CCCCTTGTATCCCCCTAGTG+TGG | - | tig0023338:29442-29461 | Msa1407950:intron | 60.0% | |
| TGCTCGCTTCCGGCAAACCT+TGG | + | tig0023338:29932-29951 | None:intergenic | 60.0% | |
| GCCATGGCGAGCAAACTGTG+TGG | + | tig0023338:29967-29986 | None:intergenic | 60.0% | |
| GGCGAGTAACCTTACTGGGG+AGG | - | tig0023338:29984-30003 | Msa1407950:intron | 60.0% | |
| TGTTGCTCGCCTCCCCAGTA+AGG | + | tig0023338:29996-30015 | None:intergenic | 60.0% | |
| AGGCGAGCAACAGCTTGCCA+TGG | - | tig0023338:30004-30023 | Msa1407950:intron | 60.0% | |
| ! | AGCTTGCCATGGCGAGTTGG+AGG | - | tig0023338:30015-30034 | Msa1407950:intron | 60.0% |
| TGCTCACCTCCAACTCGCCA+TGG | + | tig0023338:30024-30043 | None:intergenic | 60.0% | |
| AGGGACCTGCACGACACCGA+GGG | + | tig0023338:29283-29302 | None:intergenic | 65.0% | |
| AAGGGACCTGCACGACACCG+AGG | + | tig0023338:29284-29303 | None:intergenic | 65.0% | |
| AGGGACCTGCACGACACCGA+GGG | + | tig0023338:29283-29302 | None:intergenic | 65.0% | |
| AAGGGACCTGCACGACACCG+AGG | + | tig0023338:29284-29303 | None:intergenic | 65.0% | |
| !! | GGACTCCCTCGGTGTCGTGC+AGG | - | tig0023338:29275-29294 | Msa1407950:intron | 70.0% |
| !! | GGACTCCCTCGGTGTCGTGC+AGG | - | tig0023338:29275-29294 | Msa1407950:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0023338 | gene | 27582 | 31666 | 27582 | ID=Msa1407950;Name=Msa1407950 |
| tig0023338 | mRNA | 27582 | 31666 | 27582 | ID=Msa1407950-mRNA-1;Parent=Msa1407950;Name=Msa1407950-mRNA-1;_AED=0.26;_eAED=0.26;_QI=95|0.5|0.4|0.6|1|0.8|5|0|111 |
| tig0023338 | exon | 27582 | 27721 | 27582 | ID=Msa1407950-mRNA-1:exon:25396;Parent=Msa1407950-mRNA-1 |
| tig0023338 | exon | 30911 | 30936 | 30911 | ID=Msa1407950-mRNA-1:exon:25395;Parent=Msa1407950-mRNA-1 |
| tig0023338 | exon | 31119 | 31234 | 31119 | ID=Msa1407950-mRNA-1:exon:25394;Parent=Msa1407950-mRNA-1 |
| tig0023338 | exon | 31329 | 31415 | 31329 | ID=Msa1407950-mRNA-1:exon:25393;Parent=Msa1407950-mRNA-1 |
| tig0023338 | exon | 31605 | 31666 | 31605 | ID=Msa1407950-mRNA-1:exon:25392;Parent=Msa1407950-mRNA-1 |
| tig0023338 | five_prime_UTR | 31605 | 31666 | 31605 | ID=Msa1407950-mRNA-1:five_prime_utr;Parent=Msa1407950-mRNA-1 |
| tig0023338 | five_prime_UTR | 31383 | 31415 | 31383 | ID=Msa1407950-mRNA-1:five_prime_utr;Parent=Msa1407950-mRNA-1 |
| tig0023338 | CDS | 31329 | 31382 | 31329 | ID=Msa1407950-mRNA-1:cds;Parent=Msa1407950-mRNA-1 |
| tig0023338 | CDS | 31119 | 31234 | 31119 | ID=Msa1407950-mRNA-1:cds;Parent=Msa1407950-mRNA-1 |
| tig0023338 | CDS | 30911 | 30936 | 30911 | ID=Msa1407950-mRNA-1:cds;Parent=Msa1407950-mRNA-1 |
| tig0023338 | CDS | 27582 | 27721 | 27582 | ID=Msa1407950-mRNA-1:cds;Parent=Msa1407950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
