Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1416040 | sp|O80567|LRP6B_ARATH | 54.885 | 348 | 131 | 5 | 119 | 440 | 195 | 542 | 4.85e-111 | 340 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1416040 | A0A072UFW5 | 96.388 | 443 | 13 | 1 | 1 | 443 | 1 | 440 | 0.0 | 863 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0027390 | Msa1416040 | -0.814581 | 1.432025e-51 | -8.615850e-47 |
| Msa0042550 | Msa1416040 | -0.801676 | 8.045253e-49 | -8.615850e-47 |
| Msa0090280 | Msa1416040 | 0.808015 | 3.812053e-50 | -8.615850e-47 |
| Msa0691050 | Msa1416040 | -0.801593 | 8.369949e-49 | -8.615850e-47 |
| Msa0800770 | Msa1416040 | -0.806740 | 7.102431e-50 | -8.615850e-47 |
| Msa0165300 | Msa1416040 | -0.802012 | 6.864655e-49 | -8.615850e-47 |
| Msa1262990 | Msa1416040 | 0.812538 | 4.030880e-51 | -8.615850e-47 |
| Msa1340040 | Msa1416040 | 0.891388 | 4.156915e-74 | -8.615850e-47 |
| Msa0994740 | Msa1416040 | -0.807953 | 3.929082e-50 | -8.615850e-47 |
| Msa1008750 | Msa1416040 | -0.834447 | 2.981834e-56 | -8.615850e-47 |
| Msa1070840 | Msa1416040 | -0.811840 | 5.725536e-51 | -8.615850e-47 |
| Msa1096060 | Msa1416040 | -0.835876 | 1.299617e-56 | -8.615850e-47 |
| Msa0264780 | Msa1416040 | -0.802983 | 4.329769e-49 | -8.615850e-47 |
| Msa1118760 | Msa1416040 | -0.822825 | 1.925742e-53 | -8.615850e-47 |
| Msa1158660 | Msa1416040 | -0.808955 | 2.400872e-50 | -8.615850e-47 |
| Msa0526100 | Msa1416040 | 0.817750 | 2.804126e-52 | -8.615850e-47 |
| Msa0572480 | Msa1416040 | -0.803957 | 2.720613e-49 | -8.615850e-47 |
| Msa0843780 | Msa1416040 | 0.800428 | 1.448178e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1416040 | MtrunA17_Chr7g0276671 | 96.388 | 443 | 13 | 1 | 1 | 443 | 1 | 440 | 0.0 | 863 |
| Msa1416040 | MtrunA17_Chr4g0045341 | 44.720 | 322 | 154 | 6 | 118 | 439 | 100 | 397 | 7.06e-74 | 237 |
| Msa1416040 | MtrunA17_Chr2g0286061 | 36.025 | 322 | 175 | 7 | 120 | 437 | 106 | 400 | 2.00e-56 | 191 |
| Msa1416040 | MtrunA17_Chr8g0371401 | 30.808 | 198 | 124 | 5 | 39 | 229 | 256 | 447 | 5.12e-13 | 70.9 |
| Msa1416040 | MtrunA17_Chr8g0369591 | 66.667 | 42 | 14 | 0 | 208 | 249 | 13 | 54 | 6.45e-12 | 61.6 |
| Msa1416040 | MtrunA17_Chr1g0157741 | 31.667 | 120 | 67 | 2 | 109 | 213 | 2 | 121 | 2.70e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1416040 | AT2G43970.1 | 54.885 | 348 | 131 | 5 | 119 | 440 | 195 | 542 | 4.93e-112 | 340 |
| Msa1416040 | AT2G43970.2 | 50.862 | 348 | 129 | 6 | 119 | 440 | 195 | 526 | 4.45e-97 | 301 |
| Msa1416040 | AT3G19090.1 | 36.613 | 437 | 215 | 10 | 38 | 437 | 35 | 446 | 7.16e-66 | 218 |
| Msa1416040 | AT5G46250.1 | 38.110 | 328 | 181 | 10 | 115 | 438 | 101 | 410 | 2.28e-61 | 205 |
| Msa1416040 | AT3G19090.2 | 34.632 | 462 | 217 | 11 | 38 | 437 | 35 | 473 | 2.90e-60 | 204 |
| Msa1416040 | AT5G46250.3 | 42.308 | 208 | 112 | 5 | 115 | 321 | 101 | 301 | 1.72e-47 | 166 |
| Msa1416040 | AT5G46250.2 | 41.346 | 208 | 114 | 5 | 115 | 321 | 101 | 301 | 3.55e-46 | 163 |
| Msa1416040 | AT4G32720.2 | 30.769 | 143 | 85 | 2 | 111 | 239 | 4 | 146 | 8.34e-15 | 76.3 |
| Msa1416040 | AT4G32720.1 | 30.769 | 143 | 85 | 2 | 111 | 239 | 4 | 146 | 9.70e-15 | 76.3 |
Find 151 sgRNAs with CRISPR-Local
Find 759 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATTTACACGATTATTATT+TGG | 0.237518 | tig0024313:+19638 | None:intergenic |
| AGCAGACGAAGTTCCATTAT+TGG | 0.238157 | tig0024313:+26792 | None:intergenic |
| ATTATCTTACCAAAACCTTC+TGG | 0.246675 | tig0024313:+28086 | None:intergenic |
| GAGAAGAACTATCGCTAAAT+TGG | 0.247416 | tig0024313:+28807 | None:intergenic |
| CTAATTAATTGAGGTAAATA+AGG | 0.254109 | tig0024313:-19185 | Msa1416040:three_prime_UTR |
| TTCTCATTTGCCTGTGGCTC+AGG | 0.265432 | tig0024313:+20173 | None:intergenic |
| TGCATCTTTCAATAAGATTA+AGG | 0.274182 | tig0024313:-27807 | Msa1416040:CDS |
| AGGAAGGGAGGGCGTGGTCG+GGG | 0.291737 | tig0024313:-19695 | Msa1416040:CDS |
| TGCTGCCAAGCAACCTCCTC+CGG | 0.318092 | tig0024313:-19561 | Msa1416040:CDS |
| CCTCAAAACATTTGCAAGTT+GGG | 0.319825 | tig0024313:+27766 | None:intergenic |
| AACAAAGACCCAGAAGGTTT+TGG | 0.327844 | tig0024313:-28095 | Msa1416040:intron |
| AAAGATGCAACAACGGATAT+TGG | 0.359403 | tig0024313:+27821 | None:intergenic |
| CGTGGGGTGGGCACAAACTC+TGG | 0.361092 | tig0024313:+28559 | None:intergenic |
| TAGGAAGGGAGGGCGTGGTC+GGG | 0.369346 | tig0024313:-19696 | Msa1416040:CDS |
| GGCATGCGGGGCCCCGGAGG+AGG | 0.369935 | tig0024313:+19548 | None:intergenic |
| GAGGAGGCGGCGGTACTAAT+AGG | 0.375234 | tig0024313:+28536 | None:intergenic |
| CTAAATTGGATTTCATTGAT+TGG | 0.376165 | tig0024313:+28821 | None:intergenic |
| GGAAGGGAGGGCGTGGTCGG+GGG | 0.378011 | tig0024313:-19694 | Msa1416040:CDS |
| CTCCAGGTAGTTAGTGAAGA+TGG | 0.389456 | tig0024313:-27606 | Msa1416040:intron |
| CTTCAATGTCAGACTCGGTT+GGG | 0.389655 | tig0024313:+27559 | None:intergenic |
| GAACTGGCGGAGCGGACTCC+GGG | 0.391768 | tig0024313:-20629 | Msa1416040:CDS |
| TGAGGTTTGGCTTTGGAAGA+AGG | 0.392624 | tig0024313:+28373 | None:intergenic |
| GGCAAATGAGAAAGAATTAG+AGG | 0.406685 | tig0024313:-20162 | Msa1416040:CDS |
| GTTGGGAGTGGCTGGTTATG+AGG | 0.409727 | tig0024313:+27783 | None:intergenic |
| AGCTGAAGAAGACGAGAAAA+TGG | 0.410191 | tig0024313:-28704 | Msa1416040:exon |
| TTATCTTACCAAAACCTTCT+GGG | 0.411643 | tig0024313:+28087 | None:intergenic |
| CCGCCTCAAACATCCAATAA+TGG | 0.411994 | tig0024313:-26805 | Msa1416040:CDS |
| TGATGATGTAGCGGAGGAGG+AGG | 0.414278 | tig0024313:+28517 | None:intergenic |
| AGATGATGATGTAGCGGAGG+AGG | 0.418535 | tig0024313:+28514 | None:intergenic |
| CGTCGTCGTCATCTCTTTCA+AGG | 0.422200 | tig0024313:-28615 | Msa1416040:CDS |
| AGCTAAATGATGAGGGGAAC+TGG | 0.422583 | tig0024313:-20645 | Msa1416040:CDS |
| GGGCCCCGGAGGAGGTTGCT+TGG | 0.424827 | tig0024313:+19556 | None:intergenic |
| CTGTTCTGCTTCAGTTCAAT+CGG | 0.431508 | tig0024313:+28785 | None:intergenic |
| ATCGGAATGAGGTTTGGCTT+TGG | 0.436218 | tig0024313:+28366 | None:intergenic |
| GCTGCCAAGCAACCTCCTCC+GGG | 0.438347 | tig0024313:-19560 | Msa1416040:CDS |
| CATGCTATATTAACAGCTAC+AGG | 0.439157 | tig0024313:+19488 | None:intergenic |
| TTGTTCATCGGAATGAGGTT+TGG | 0.443583 | tig0024313:+28360 | None:intergenic |
| ATTAAAGAGTGAAGTGGAAG+TGG | 0.446599 | tig0024313:-28909 | Msa1416040:five_prime_UTR |
| TCTTGTACCATCTGGCATGC+GGG | 0.449265 | tig0024313:+19535 | None:intergenic |
| ATTTGCAAGTTGGGAGTGGC+TGG | 0.450222 | tig0024313:+27775 | None:intergenic |
| ATAGGAAGGGAGGGCGTGGT+CGG | 0.451541 | tig0024313:-19697 | Msa1416040:CDS |
| TGTTCGTGCAACTGAGCATC+AGG | 0.451968 | tig0024313:+20128 | None:intergenic |
| ATGTTTACCTTGTTATGTAA+AGG | 0.457953 | tig0024313:+26742 | None:intergenic |
| TTGGAAGAAGGAGTGTGCTC+TGG | 0.458505 | tig0024313:+28385 | None:intergenic |
| TTCCAGTCAAAACCTACTCC+TGG | 0.459250 | tig0024313:-20254 | Msa1416040:intron |
| TCTCATTTGCCTGTGGCTCA+GGG | 0.461274 | tig0024313:+20174 | None:intergenic |
| TATTTGAAGGGGAAGTTCCC+AGG | 0.465947 | tig0024313:+19612 | None:intergenic |
| TTGTACATTCTAATTAATTG+AGG | 0.466504 | tig0024313:-19194 | Msa1416040:three_prime_UTR |
| TGATGATCTGGTGGTGGTGG+TGG | 0.467390 | tig0024313:+28481 | None:intergenic |
| CGGTGGTTGGTTGCTTGAGT+CGG | 0.467606 | tig0024313:+28761 | None:intergenic |
| TCCTCAAAACATTTGCAAGT+TGG | 0.475112 | tig0024313:+27765 | None:intergenic |
| TACTTCTGTCCCTGAGCCAC+AGG | 0.475920 | tig0024313:-20183 | Msa1416040:CDS |
| TTCTGATGACAATGATCGTC+GGG | 0.478445 | tig0024313:+27292 | None:intergenic |
| ATGAGAAAGAGAGCGGACAT+AGG | 0.480107 | tig0024313:-19715 | Msa1416040:CDS |
| ACTTCGTCTGCTTCTAGATC+GGG | 0.481072 | tig0024313:-26781 | Msa1416040:CDS |
| GTTCCATTATTGGATGTTTG+AGG | 0.487748 | tig0024313:+26802 | None:intergenic |
| TCATCATCCTCATCATCATC+AGG | 0.488230 | tig0024313:-28458 | Msa1416040:CDS |
| TTGGGAGTGGCTGGTTATGA+GGG | 0.490443 | tig0024313:+27784 | None:intergenic |
| ATTGGATGTTTGAGGCGGAC+AGG | 0.492043 | tig0024313:+26810 | None:intergenic |
| TACTCCTGGACGGGGAAGGA+AGG | 0.492601 | tig0024313:-20240 | Msa1416040:CDS |
| GTCAAAACCTACTCCTGGAC+GGG | 0.496768 | tig0024313:-20249 | Msa1416040:CDS |
| TCTAGATCGGGAAAAGTTGA+TGG | 0.498191 | tig0024313:-26769 | Msa1416040:CDS |
| TTATTTCAGTGATTTAAACT+TGG | 0.500064 | tig0024313:-28147 | Msa1416040:CDS |
| GAAAATCCTCTTGTACCATC+TGG | 0.502055 | tig0024313:+19527 | None:intergenic |
| GAAAGAGAGCGGACATAGGA+AGG | 0.504864 | tig0024313:-19711 | Msa1416040:CDS |
| TCTTTATTGACCAGGATTGA+CGG | 0.505925 | tig0024313:+28848 | None:intergenic |
| AGACCCTTCCTTCCCCGTCC+AGG | 0.508438 | tig0024313:+20236 | None:intergenic |
| TTGTCATCAGAATCTTATGA+AGG | 0.509136 | tig0024313:-27281 | Msa1416040:CDS |
| GATGACGACGACGATGATGA+TGG | 0.512490 | tig0024313:+28625 | None:intergenic |
| GGACATAGGAAGGGAGGGCG+TGG | 0.513609 | tig0024313:-19701 | Msa1416040:CDS |
| CTCTTGTACCATCTGGCATG+CGG | 0.517519 | tig0024313:+19534 | None:intergenic |
| AGCGGAGGAGGAGGAGGCGG+CGG | 0.520346 | tig0024313:+28526 | None:intergenic |
| TGATGTAGCGGAGGAGGAGG+AGG | 0.521593 | tig0024313:+28520 | None:intergenic |
| TTCAATGTCAGACTCGGTTG+GGG | 0.523708 | tig0024313:+27560 | None:intergenic |
| AGAAGATGATGATGTAGCGG+AGG | 0.525562 | tig0024313:+28511 | None:intergenic |
| TGATGATGATCTGGTGGTGG+TGG | 0.525891 | tig0024313:+28478 | None:intergenic |
| TAATCGTGTAAATCATCACC+TGG | 0.526562 | tig0024313:-19630 | Msa1416040:CDS |
| TGTAGCGGAGGAGGAGGAGG+CGG | 0.526591 | tig0024313:+28523 | None:intergenic |
| TCTTCAATGTCAGACTCGGT+TGG | 0.526685 | tig0024313:+27558 | None:intergenic |
| AACTTCGTCTGCTTCTAGAT+CGG | 0.531843 | tig0024313:-26782 | Msa1416040:CDS |
| AAACATTTGCAAGTTGGGAG+TGG | 0.531969 | tig0024313:+27771 | None:intergenic |
| TTCCTTCCCCGTCCAGGAGT+AGG | 0.532006 | tig0024313:+20242 | None:intergenic |
| AATTCTTTCTCATTTGCCTG+TGG | 0.537701 | tig0024313:+20167 | None:intergenic |
| GAGGAGATAAATGATGTCAA+AGG | 0.538084 | tig0024313:+19331 | None:intergenic |
| GAGAGCGGACATAGGAAGGG+AGG | 0.538114 | tig0024313:-19707 | Msa1416040:CDS |
| ACTCCTGGACGGGGAAGGAA+GGG | 0.541755 | tig0024313:-20239 | Msa1416040:CDS |
| TCCAGGTAGTTAGTGAAGAT+GGG | 0.547894 | tig0024313:-27605 | Msa1416040:intron |
| AATATCATTAAAGAGTGAAG+TGG | 0.549928 | tig0024313:-28915 | None:intergenic |
| ATGTTTGAGGCGGACAGGTA+CGG | 0.550213 | tig0024313:+26815 | None:intergenic |
| CGACTCAAGCAACCAACCAC+CGG | 0.551348 | tig0024313:-28760 | Msa1416040:five_prime_UTR |
| TGAGGTTGTTCATCGGAATG+AGG | 0.552368 | tig0024313:+28355 | None:intergenic |
| TCTGGCTGCTCAACTTCTTG+AGG | 0.552500 | tig0024313:+28403 | None:intergenic |
| TTGGTGACTCTTTATTGACC+AGG | 0.553596 | tig0024313:+28840 | None:intergenic |
| TGACGGCGAGATCACTACTT+GGG | 0.554675 | tig0024313:+28651 | None:intergenic |
| TAAAGAAGATGATGATGTAG+CGG | 0.555073 | tig0024313:+28508 | None:intergenic |
| AAAACACGTCAACGCTGGAA+CGG | 0.555902 | tig0024313:-19440 | Msa1416040:three_prime_UTR |
| GGTACTAATAGGCGTGGGGT+GGG | 0.561854 | tig0024313:+28547 | None:intergenic |
| GCATGAAAACACGTCAACGC+TGG | 0.565000 | tig0024313:-19445 | Msa1416040:three_prime_UTR |
| GTCACTGAGCTAAATGATGA+GGG | 0.566627 | tig0024313:-20652 | Msa1416040:CDS |
| GATGAATCTCATCAAATGAT+CGG | 0.570681 | tig0024313:+28118 | None:intergenic |
| CTTGTACCATCTGGCATGCG+GGG | 0.570854 | tig0024313:+19536 | None:intergenic |
| ACGGCGAGATCACTACTTGG+GGG | 0.576200 | tig0024313:+28653 | None:intergenic |
| AACCTACTCCTGGACGGGGA+AGG | 0.579755 | tig0024313:-20244 | Msa1416040:CDS |
| GACGATGATGATGGATCTGA+CGG | 0.582742 | tig0024313:+28634 | None:intergenic |
| TGGCATACCTTTACATAACA+AGG | 0.584359 | tig0024313:-26749 | Msa1416040:intron |
| GGTCACTGAGCTAAATGATG+AGG | 0.584362 | tig0024313:-20653 | Msa1416040:CDS |
| AGAGCGGACATAGGAAGGGA+GGG | 0.585125 | tig0024313:-19706 | Msa1416040:CDS |
| GATGTTACTCACCGCTCTCT+CGG | 0.589348 | tig0024313:+20770 | None:intergenic |
| TGAATATGAATCTGTTGAGC+TGG | 0.591235 | tig0024313:-20793 | Msa1416040:CDS |
| TAGCTCTTCAATGTCAGACT+CGG | 0.591776 | tig0024313:+27554 | None:intergenic |
| TATTTGGATGAAAATGAACT+CGG | 0.595006 | tig0024313:+19654 | None:intergenic |
| CGGCGAGATCACTACTTGGG+GGG | 0.596883 | tig0024313:+28654 | None:intergenic |
| TTTGTGATGAGGTTGTTCAT+CGG | 0.597803 | tig0024313:+28348 | None:intergenic |
| TGAAGTGGAAGTGGAAGTGA+TGG | 0.597913 | tig0024313:-28900 | Msa1416040:five_prime_UTR |
| TGATGATGATGATCTGGTGG+TGG | 0.598304 | tig0024313:+28475 | None:intergenic |
| GATGACAATGATCGTCGGGT+AGG | 0.599393 | tig0024313:+27296 | None:intergenic |
| TGTTGAGCTGGCCGAGAGAG+CGG | 0.600580 | tig0024313:-20781 | Msa1416040:intron |
| ATTCTGATGACAATGATCGT+CGG | 0.601582 | tig0024313:+27291 | None:intergenic |
| GGCTGCTCAACTTCTTGAGG+AGG | 0.601820 | tig0024313:+28406 | None:intergenic |
| CGCATGCCAGATGGTACAAG+AGG | 0.603967 | tig0024313:-19533 | Msa1416040:CDS |
| ACTTAGCAGGGAGAAGAGCA+TGG | 0.609316 | tig0024313:-19740 | Msa1416040:intron |
| AAAGAGAGCGGACATAGGAA+GGG | 0.610017 | tig0024313:-19710 | Msa1416040:CDS |
| CTTATTGAAAGATGCAACAA+CGG | 0.610319 | tig0024313:+27814 | None:intergenic |
| AGTCAAAACCTACTCCTGGA+CGG | 0.623812 | tig0024313:-20250 | Msa1416040:CDS |
| GACGGCGAGATCACTACTTG+GGG | 0.623843 | tig0024313:+28652 | None:intergenic |
| GTGGAAGTGATGGGCCTGTG+TGG | 0.624497 | tig0024313:-28890 | Msa1416040:five_prime_UTR |
| AATGGCGGAAGAAGAAGAGT+CGG | 0.627352 | tig0024313:-28686 | Msa1416040:CDS |
| CCCGGCCCACAAAACCACAC+AGG | 0.628040 | tig0024313:+28876 | None:intergenic |
| GAGGATATTGATGATGAGAG+CGG | 0.628630 | tig0024313:+28425 | None:intergenic |
| TCGTCTAATGCTTAGACGCA+CGG | 0.629406 | tig0024313:-20605 | Msa1416040:intron |
| TGTTGAAGTTAGCTGTGAGG+AGG | 0.632911 | tig0024313:-20210 | Msa1416040:CDS |
| GTGCAACTGAGCATCAGGAA+AGG | 0.633550 | tig0024313:+20133 | None:intergenic |
| TTCATCAACAAAGACCCAGA+AGG | 0.634070 | tig0024313:-28101 | Msa1416040:CDS |
| CCATTATTGGATGTTTGAGG+CGG | 0.636750 | tig0024313:+26805 | None:intergenic |
| GTCTAAGCATTAGACGAACC+CGG | 0.652156 | tig0024313:+20611 | None:intergenic |
| CTGCCAAGCAACCTCCTCCG+GGG | 0.660531 | tig0024313:-19559 | Msa1416040:CDS |
| CATGGTTATGAGAAAGAGAG+CGG | 0.665919 | tig0024313:-19722 | Msa1416040:CDS |
| GATGAGGGGAACTGGCGGAG+CGG | 0.666474 | tig0024313:-20637 | Msa1416040:CDS |
| TGAACCACCTGATGATGATG+AGG | 0.668556 | tig0024313:+28451 | None:intergenic |
| TGCTCAGTTGCACGAACATG+CGG | 0.668557 | tig0024313:-20123 | Msa1416040:intron |
| TCATCCTCATCATCATCAGG+TGG | 0.675367 | tig0024313:-28455 | Msa1416040:CDS |
| TAAATGATGAGGGGAACTGG+CGG | 0.683474 | tig0024313:-20642 | Msa1416040:CDS |
| AATCGTGTAAATCATCACCT+GGG | 0.691222 | tig0024313:-19629 | Msa1416040:CDS |
| CGGCGGTACTAATAGGCGTG+GGG | 0.695519 | tig0024313:+28543 | None:intergenic |
| TCAAAACCTACTCCTGGACG+GGG | 0.695544 | tig0024313:-20248 | Msa1416040:CDS |
| TCACTGAGCTAAATGATGAG+GGG | 0.698571 | tig0024313:-20651 | Msa1416040:CDS |
| TGAAGAAGACGAGAAAATGG+CGG | 0.706893 | tig0024313:-28701 | Msa1416040:exon |
| GAAGTGGAAGTGGAAGTGAT+GGG | 0.714544 | tig0024313:-28899 | Msa1416040:five_prime_UTR |
| TGATGTTGAAGTTAGCTGTG+AGG | 0.724666 | tig0024313:-20213 | Msa1416040:CDS |
| ATATATAGTGTACTAGTACG+AGG | 0.725069 | tig0024313:-19405 | Msa1416040:three_prime_UTR |
| TATAGTGTACTAGTACGAGG+CGG | 0.766430 | tig0024313:-19402 | Msa1416040:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAATATAAAAAAAAA+AGG | + | tig0024313:20395-20414 | None:intergenic | 0.0% |
| !!! | AATTTTAGTAACTTAATTTA+AGG | - | tig0024313:21826-21845 | Msa1416040:intron | 10.0% |
| !! | TTGAAATTAAAAAAAGATAA+AGG | - | tig0024313:22044-22063 | Msa1416040:intron | 10.0% |
| !! | ATATAAAGTTATTAATTAGT+GGG | + | tig0024313:22768-22787 | Msa1416050:intron | 10.0% |
| !!! | TTTATTCAAGATATATTTTT+TGG | + | tig0024313:25487-25506 | None:intergenic | 10.0% |
| !!! | ATATATTAGTTTATTTCATA+CGG | + | tig0024313:26828-26847 | None:intergenic | 10.0% |
| !!! | AATTTGTTTTTCATATTTTT+AGG | - | tig0024313:27052-27071 | Msa1416040:intron | 10.0% |
| !!! | AAAAATTGTAGATATTTTTA+TGG | - | tig0024313:27790-27809 | Msa1416040:CDS | 10.0% |
| !!! | ATTTATTTTCATTTTAATTG+TGG | - | tig0024313:28123-28142 | Msa1416040:CDS | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | tig0024313:22176-22195 | Msa1416040:intron | 100.0% |
| !! | TTGAAATGAAAAAAAGATAA+AGG | + | tig0024313:21864-21883 | Msa1416050:intron | 15.0% |
| !! | TTCTATATTACTTAGTTATT+AGG | + | tig0024313:22120-22139 | Msa1416050:intron | 15.0% |
| !! | AATATAGAAACTAATCTTAA+TGG | - | tig0024313:22131-22150 | Msa1416040:intron | 15.0% |
| !! | GTGATTGAATTATTATTATA+TGG | + | tig0024313:22275-22294 | Msa1416050:CDS | 15.0% |
| !!! | TTTAGGATATTATGTATTAT+AGG | - | tig0024313:22469-22488 | Msa1416040:intron | 15.0% |
| !! | GATATAAAGTTATTAATTAG+TGG | + | tig0024313:22769-22788 | Msa1416050:intron | 15.0% |
| !!! | TTATTACTTCTTTTAAAAGT+GGG | + | tig0024313:22985-23004 | Msa1416050:intron | 15.0% |
| !!! | TTTATTACTTCTTTTAAAAG+TGG | + | tig0024313:22986-23005 | Msa1416050:intron | 15.0% |
| !!! | AAAAGAAGTAATATTTTATG+AGG | - | tig0024313:23031-23050 | Msa1416040:intron | 15.0% |
| !!! | ATATTATTTCTTTTGAAAGT+GGG | + | tig0024313:23506-23525 | Msa1416050:CDS | 15.0% |
| !!! | AATATTATTTCTTTTGAAAG+TGG | + | tig0024313:23507-23526 | Msa1416050:CDS | 15.0% |
| !! | ATAATAACCTTGAATATTAT+TGG | - | tig0024313:24085-24104 | Msa1416040:intron | 15.0% |
| !!! | ACGTAAATTGTTTTATTTTT+CGG | + | tig0024313:24159-24178 | None:intergenic | 15.0% |
| !! | AAAAATAAAACAATTTACGT+GGG | - | tig0024313:24159-24178 | Msa1416040:intron | 15.0% |
| !!! | AAGTTTTTAAGTTTCAAATA+AGG | + | tig0024313:25285-25304 | None:intergenic | 15.0% |
| !! | AAACTTAAAAAACTTCAAAT+AGG | - | tig0024313:25299-25318 | Msa1416040:intron | 15.0% |
| !!! | ATTAAGATTTTTAAGTTTCA+AGG | + | tig0024313:25333-25352 | None:intergenic | 15.0% |
| !! | TTGAAACTTAAAAATCTTAA+TGG | - | tig0024313:25332-25351 | Msa1416040:intron | 15.0% |
| !!! | ATTTTTTGGTTTGTTTATTT+CGG | + | tig0024313:25473-25492 | None:intergenic | 15.0% |
| !!! | TATATTCTACCATTTTATTT+TGG | + | tig0024313:25701-25720 | None:intergenic | 15.0% |
| !! | TAAAATCTATTATTATTTGC+AGG | + | tig0024313:26972-26991 | None:intergenic | 15.0% |
| !!! | TGCAAATAATAATAGATTTT+AGG | - | tig0024313:26971-26990 | Msa1416040:intron | 15.0% |
| !! | AAATACTTGGATAAATAAAA+TGG | + | tig0024313:27535-27554 | None:intergenic | 15.0% |
| !!! | TTTTATTTATCCAAGTATTT+TGG | - | tig0024313:27535-27554 | Msa1416040:intron | 15.0% |
| !!! | TTTAATTTTTTCATTCAAGT+TGG | + | tig0024313:27709-27728 | None:intergenic | 15.0% |
| !!! | AATAAATGTTTGATAATTGA+AGG | + | tig0024313:28110-28129 | None:intergenic | 15.0% |
| !! | TAAAAAATGAACTATTTGAA+GGG | + | tig0024313:28493-28512 | None:intergenic | 15.0% |
| !!! | ATTTTCTATTTAAATATGGT+CGG | - | tig0024313:28727-28746 | Msa1416040:five_prime_UTR | 15.0% |
| !!! | TAAAACAACGTTTTTTAAAA+CGG | + | tig0024313:28808-28827 | None:intergenic | 15.0% |
| !! | TTATTTCAGTGATTTAAACT+TGG | - | tig0024313:19943-19962 | Msa1416040:intron | 20.0% |
| !! | ATATATAGTATATGAGTTCA+TGG | + | tig0024313:21390-21409 | Msa1416050:intron | 20.0% |
| !! | AAGATGATTATAATCTATAG+TGG | + | tig0024313:21414-21433 | Msa1416050:intron | 20.0% |
| !! | AACGAGAAGAAATATAATTA+TGG | - | tig0024313:21660-21679 | Msa1416040:intron | 20.0% |
| !!! | TTCTGATTTTCCTATTTAAT+TGG | + | tig0024313:21774-21793 | Msa1416050:intron | 20.0% |
| !! | AACAAATCATAATGATAACT+AGG | - | tig0024313:21794-21813 | Msa1416040:intron | 20.0% |
| !!! | TTCATGGTTTTATTTTCTTA+TGG | - | tig0024313:21922-21941 | Msa1416040:intron | 20.0% |
| !! | CATTTCAATCTTCAAATTTA+TGG | - | tig0024313:21945-21964 | Msa1416040:intron | 20.0% |
| !! | CTTAAAAATCCATATGAAAA+TGG | - | tig0024313:22006-22025 | Msa1416040:intron | 20.0% |
| !!! | TAATTTCAATTTTGTCCTTT+TGG | + | tig0024313:22033-22052 | Msa1416050:intron | 20.0% |
| !! | TTACCCATAAATTAAGTTAA+GGG | - | tig0024313:22076-22095 | Msa1416040:intron | 20.0% |
| !! | TATTATATGGTCATATATCA+TGG | + | tig0024313:22262-22281 | Msa1416050:CDS | 20.0% |
| !!! | GAGATAAACTAAGATATTTT+AGG | - | tig0024313:22379-22398 | Msa1416040:intron | 20.0% |
| !! | GGATAATATCAAGATATTAT+AGG | - | tig0024313:22400-22419 | Msa1416040:intron | 20.0% |
| !!! | GAGATAAACTAAGATATTTT+AGG | - | tig0024313:22379-22398 | Msa1416040:intron | 20.0% |
| !!! | TATTACTTCTTTTAAAAGTG+GGG | + | tig0024313:22984-23003 | Msa1416050:intron | 20.0% |
| !! | GTAATAAAATATGTACAAGT+TGG | - | tig0024313:22998-23017 | Msa1416040:intron | 20.0% |
| !!! | ATATTACTTCTTTTGAAAGT+GGG | + | tig0024313:23025-23044 | Msa1416050:intron | 20.0% |
| !!! | AATATTACTTCTTTTGAAAG+TGG | + | tig0024313:23026-23045 | Msa1416050:intron | 20.0% |
| !! | GTAATAAAATATGTACAAGT+TGG | - | tig0024313:22998-23017 | Msa1416040:intron | 20.0% |
| !!! | AATATTACTTCTTTTGAAAG+TGG | + | tig0024313:23026-23045 | Msa1416050:intron | 20.0% |
| !!! | ATGAGAAGTAATATTTTATG+AGG | - | tig0024313:23280-23299 | Msa1416040:intron | 20.0% |
| !! | GTAATAAAATATGTACAAGT+TGG | - | tig0024313:22998-23017 | Msa1416040:intron | 20.0% |
| !!! | ATGAGAAGTAATATTTTATG+AGG | - | tig0024313:23280-23299 | Msa1416040:intron | 20.0% |
| !! | GAAAAATAAAACAATTTACG+TGG | - | tig0024313:24158-24177 | Msa1416040:intron | 20.0% |
| !!! | GATACTATAAGATATTTTCT+AGG | - | tig0024313:25142-25161 | Msa1416040:intron | 20.0% |
| !! | TTGAAACTTAAACAACTTAA+AGG | + | tig0024313:25216-25235 | None:intergenic | 20.0% |
| !! | TGCATTAAATTAAAAACTCA+AGG | + | tig0024313:25245-25264 | None:intergenic | 20.0% |
| !!! | TTTAAGTTTGACAAAAATAC+CGG | + | tig0024313:25184-25203 | None:intergenic | 20.0% |
| !! | AACTTGGAATATTAGAAAAT+AGG | + | tig0024313:25407-25426 | None:intergenic | 20.0% |
| !!! | TTTTTTGGTTTGTTTATTTC+GGG | + | tig0024313:25472-25491 | None:intergenic | 20.0% |
| !! | AACTTCAAACCAAAATAAAA+TGG | - | tig0024313:25689-25708 | Msa1416040:intron | 20.0% |
| !! | AAGTTAAAAATCATCAAATG+AGG | - | tig0024313:26010-26029 | Msa1416040:intron | 20.0% |
| !! | AGTTAAAAATCATCAAATGA+GGG | - | tig0024313:26011-26030 | Msa1416040:intron | 20.0% |
| !! | TCTCTATTTATTTAGGAATT+AGG | + | tig0024313:26768-26787 | None:intergenic | 20.0% |
| !!! | CCTATTTTCTCTATTTATTT+AGG | + | tig0024313:26775-26794 | None:intergenic | 20.0% |
| !! | CCTAAATAAATAGAGAAAAT+AGG | - | tig0024313:26772-26791 | Msa1416040:CDS | 20.0% |
| !! | ATAGGAAACAAATCATAATA+AGG | - | tig0024313:26790-26809 | Msa1416040:CDS | 20.0% |
| !!! | TTCATCTTAGTTTACATTTT+AGG | - | tig0024313:27382-27401 | Msa1416040:intron | 20.0% |
| !! | GTTGTATAAACAAAGATTAT+TGG | + | tig0024313:27568-27587 | None:intergenic | 20.0% |
| !! | AATTCTTAAATCATAAACAG+TGG | + | tig0024313:28014-28033 | None:intergenic | 20.0% |
| !!! | ATTTTCATTTTAATTGTGGT+CGG | - | tig0024313:28127-28146 | Msa1416040:CDS | 20.0% |
| !! | TGATTTACACGATTATTATT+TGG | + | tig0024313:28455-28474 | None:intergenic | 20.0% |
| !! | AAAAAATGAACTATTTGAAG+GGG | + | tig0024313:28492-28511 | None:intergenic | 20.0% |
| !! | GTAAAAAATGAACTATTTGA+AGG | + | tig0024313:28494-28513 | None:intergenic | 20.0% |
| !!! | AGTATTTTTTTTTAGAAGAG+AGG | + | tig0024313:28781-28800 | None:intergenic | 20.0% |
| !!! | GTTTTAAAAAACGTTGTTTT+AGG | - | tig0024313:28807-28826 | Msa1416040:five_prime_UTR | 20.0% |
| !! | TTGTACATTCTAATTAATTG+AGG | - | tig0024313:28896-28915 | Msa1416040:five_prime_UTR | 20.0% |
| !! | CTAATTAATTGAGGTAAATA+AGG | - | tig0024313:28905-28924 | Msa1416040:five_prime_UTR | 20.0% |
| ! | CTAAATTGGATTTCATTGAT+TGG | + | tig0024313:19272-19291 | None:intergenic | 25.0% |
| !!! | TTCTGTTTAGATTACTTTTC+CGG | + | tig0024313:19352-19371 | None:intergenic | 25.0% |
| !! | TGTTTCAAAATTTTGTGATG+AGG | + | tig0024313:19756-19775 | None:intergenic | 25.0% |
| !!! | TCATCACAAAATTTTGAAAC+AGG | - | tig0024313:19755-19774 | Msa1416040:intron | 25.0% |
| !!! | AACACTGAATTTTGTTGTAT+AGG | - | tig0024313:20194-20213 | Msa1416040:CDS | 25.0% |
| ! | TGCATCTTTCAATAAGATTA+AGG | - | tig0024313:20283-20302 | Msa1416040:intron | 25.0% |
| !!! | CTTTTTGAAACATTCTATTC+AGG | - | tig0024313:20696-20715 | Msa1416040:intron | 25.0% |
| !! | ATTCAGGATGTATTCTATTT+TGG | - | tig0024313:20712-20731 | Msa1416040:intron | 25.0% |
| !!! | TCATATCTTGCAATCTTTTT+TGG | - | tig0024313:20745-20764 | Msa1416040:intron | 25.0% |
| !! | TTTGAAGTGTAATTCATGTT+TGG | - | tig0024313:20995-21014 | Msa1416040:intron | 25.0% |
| !! | CTTATAATTCAAAGTTTTGC+AGG | + | tig0024313:21214-21233 | Msa1416050:CDS | 25.0% |
| !! | ATGTTTACCTTGTTATGTAA+AGG | + | tig0024313:21351-21370 | Msa1416050:intron | 25.0% |
| !! | CTACATGCTTAAAAAAGTTT+TGG | + | tig0024313:21448-21467 | Msa1416050:intron | 25.0% |
| !! | GTATACATGAATTTCAGTTT+TGG | - | tig0024313:21485-21504 | Msa1416040:intron | 25.0% |
| ! | AAAGAATAACCCCTATTTAT+AGG | - | tig0024313:21726-21745 | Msa1416040:intron | 25.0% |
| ! | AAGAATAACCCCTATTTATA+GGG | - | tig0024313:21727-21746 | Msa1416040:intron | 25.0% |
| ! | TGTATAGATCCCTATAAATA+GGG | + | tig0024313:21739-21758 | Msa1416050:CDS | 25.0% |
| ! | TTGTATAGATCCCTATAAAT+AGG | + | tig0024313:21740-21759 | Msa1416050:CDS | 25.0% |
| ! | GTTACCCATAAATTAAGTTA+AGG | - | tig0024313:22075-22094 | Msa1416040:intron | 25.0% |
| ! | AGTCCCTTAACTTAATTTAT+GGG | + | tig0024313:22082-22101 | Msa1416050:intron | 25.0% |
| ! | TAGTCCCTTAACTTAATTTA+TGG | + | tig0024313:22083-22102 | Msa1416050:intron | 25.0% |
| !!! | ATTACTTCTTTTAAAAGTGG+GGG | + | tig0024313:22983-23002 | Msa1416050:intron | 25.0% |
| !! | CATATTTAAGCACTTTTCAT+TGG | - | tig0024313:23113-23132 | Msa1416040:intron | 25.0% |
| !! | CATATTTAAGCACTTTTCAT+TGG | - | tig0024313:23113-23132 | Msa1416040:intron | 25.0% |
| !! | CATATTTAAGCACTTTTCAT+TGG | - | tig0024313:23113-23132 | Msa1416040:intron | 25.0% |
| !!! | CCTAGTTTATTTTTCAGTTT+GGG | + | tig0024313:24842-24861 | None:intergenic | 25.0% |
| ! | CCAAACTGAAAAATAAACTA+GGG | - | tig0024313:24840-24859 | Msa1416040:intron | 25.0% |
| !! | AATACTAGTTCTTTGTCTTT+GGG | + | tig0024313:24887-24906 | None:intergenic | 25.0% |
| !! | AAATACTAGTTCTTTGTCTT+TGG | + | tig0024313:24888-24907 | None:intergenic | 25.0% |
| ! | GATTATCAATGATATTCAAG+AGG | + | tig0024313:24976-24995 | None:intergenic | 25.0% |
| ! | CTTGGTTATAAATATCAAGT+CGG | + | tig0024313:25007-25026 | None:intergenic | 25.0% |
| ! | TAGATTTGATTGTAATCACT+TGG | + | tig0024313:25025-25044 | None:intergenic | 25.0% |
| ! | TTGAGTAAATATCGCTAATT+AGG | + | tig0024313:25087-25106 | None:intergenic | 25.0% |
| !!! | TAAAAACCAAAAGAGGTATT+TGG | + | tig0024313:25168-25187 | None:intergenic | 25.0% |
| ! | TCAAACTTAAAAACCAAAAG+AGG | + | tig0024313:25175-25194 | None:intergenic | 25.0% |
| ! | TTAAGTTTGACAAAAATACC+AGG | - | tig0024313:25185-25204 | Msa1416040:intron | 25.0% |
| ! | TTTCAAATAAGGCCTTAAAA+GGG | + | tig0024313:25274-25293 | None:intergenic | 25.0% |
| ! | TTAAGTTTGACAAAAATACC+GGG | + | tig0024313:25185-25204 | None:intergenic | 25.0% |
| !!! | GGTATTTTTGTCAAACTTAA+AGG | - | tig0024313:25363-25382 | Msa1416040:intron | 25.0% |
| !! | GTATATGTTTACTCTAGAAA+TGG | + | tig0024313:25450-25469 | None:intergenic | 25.0% |
| ! | TATTTCTTCAAATGGATGTT+TGG | + | tig0024313:25541-25560 | None:intergenic | 25.0% |
| !! | GGTCTATTATCATTTAAGTT+TGG | + | tig0024313:25629-25648 | None:intergenic | 25.0% |
| !! | ATTCAGGTTTCAATTACTAT+TGG | + | tig0024313:25656-25675 | None:intergenic | 25.0% |
| ! | AGTGGTTAAACATTAAGTTA+TGG | + | tig0024313:25757-25776 | None:intergenic | 25.0% |
| ! | TTAGCTTCTACCATTATATT+AGG | + | tig0024313:25814-25833 | None:intergenic | 25.0% |
| ! | AGCTTCTTCAAAAAGAAAAA+TGG | - | tig0024313:25939-25958 | Msa1416040:intron | 25.0% |
| !!! | TTTTTAACTTCATCGTTTTG+CGG | + | tig0024313:26000-26019 | None:intergenic | 25.0% |
| ! | ACAAAGAAACCATTAAAAGT+TGG | - | tig0024313:26077-26096 | Msa1416040:intron | 25.0% |
| ! | TATTGTTCAAATGCAATGTT+TGG | + | tig0024313:26300-26319 | None:intergenic | 25.0% |
| !! | CTAAATCTTTGGTAACAAAT+AGG | - | tig0024313:26431-26450 | Msa1416040:intron | 25.0% |
| !! | ATGGAGGAAAATAAATGTTT+TGG | + | tig0024313:27516-27535 | None:intergenic | 25.0% |
| ! | TACTTGGATAAATAAAATGG+AGG | + | tig0024313:27532-27551 | None:intergenic | 25.0% |
| ! | TGTCATTAAAAAGCTCTTTA+TGG | - | tig0024313:27611-27630 | Msa1416040:intron | 25.0% |
| !! | AGAATATGTATTTGTTGACA+AGG | + | tig0024313:27637-27656 | None:intergenic | 25.0% |
| !!! | AATGGTTTTATGTGTCATAA+AGG | - | tig0024313:27751-27770 | Msa1416040:CDS | 25.0% |
| !!! | ATGGTTTTATGTGTCATAAA+GGG | - | tig0024313:27752-27771 | Msa1416040:CDS | 25.0% |
| ! | CTGAGTCACAAAAATAAAAA+AGG | + | tig0024313:28162-28181 | None:intergenic | 25.0% |
| ! | TATTAACATGACAACTAAAG+AGG | + | tig0024313:28263-28282 | None:intergenic | 25.0% |
| ! | GAATGATGGTCAAAATAAAA+GGG | + | tig0024313:28325-28344 | None:intergenic | 25.0% |
| ! | TATTTGGATGAAAATGAACT+CGG | + | tig0024313:28439-28458 | None:intergenic | 25.0% |
| !!! | ATTTTTTACTGATCAACAAG+TGG | - | tig0024313:28505-28524 | Msa1416040:CDS | 25.0% |
| ! | TAAAGAAGATGATGATGTAG+CGG | + | tig0024313:19585-19604 | None:intergenic | 30.0% |
| CATGGAATGAAGATGAAATT+AGG | + | tig0024313:19793-19812 | None:intergenic | 30.0% | |
| GATGAATCTCATCAAATGAT+CGG | + | tig0024313:19975-19994 | None:intergenic | 30.0% | |
| TTATCTTACCAAAACCTTCT+GGG | + | tig0024313:20006-20025 | None:intergenic | 30.0% | |
| ATTATCTTACCAAAACCTTC+TGG | + | tig0024313:20007-20026 | None:intergenic | 30.0% | |
| TGAGTAGAATGAAATGTTTG+AGG | + | tig0024313:20074-20093 | None:intergenic | 30.0% | |
| !! | CTGAATTTTGTTGTATAGGA+TGG | - | tig0024313:20198-20217 | Msa1416040:CDS | 30.0% |
| CTTATTGAAAGATGCAACAA+CGG | + | tig0024313:20279-20298 | None:intergenic | 30.0% | |
| !! | ACAAACTTTTGACTGACTTT+AGG | - | tig0024313:20576-20595 | Msa1416040:intron | 30.0% |
| ATCAAAATACAACCCATCAA+AGG | + | tig0024313:20656-20675 | None:intergenic | 30.0% | |
| TTGTCATCAGAATCTTATGA+AGG | - | tig0024313:20809-20828 | Msa1416040:CDS | 30.0% | |
| AAAATTAAGTGCATTCACGT+TGG | + | tig0024313:20952-20971 | None:intergenic | 30.0% | |
| AAATTAGACTATTACCAGCT+TGG | + | tig0024313:21074-21093 | Msa1416050:intron | 30.0% | |
| CTTCTTGTCTAACTATTGTT+TGG | - | tig0024313:21100-21119 | Msa1416040:intron | 30.0% | |
| GACATTTAATTGAACTCCAT+GGG | - | tig0024313:21518-21537 | Msa1416040:intron | 30.0% | |
| GTATAGATCCCTATAAATAG+GGG | + | tig0024313:21738-21757 | Msa1416050:CDS | 30.0% | |
| ACTCGTAAGTCCAATTAAAT+AGG | - | tig0024313:21761-21780 | Msa1416040:intron | 30.0% | |
| CCATATGCAAATGAATCAAA+AGG | + | tig0024313:21893-21912 | Msa1416050:intron | 30.0% | |
| !! | CCTTTTGATTCATTTGCATA+TGG | - | tig0024313:21890-21909 | Msa1416040:intron | 30.0% |
| CATATGGATCTTCAAATTCA+TGG | - | tig0024313:21906-21925 | Msa1416040:intron | 30.0% | |
| ! | TTAATGGTCTTTGTTTGTGA+GGG | - | tig0024313:22147-22166 | Msa1416040:intron | 30.0% |
| !! | TCTAACAAGCTTTAACTTGA+GGG | + | tig0024313:22520-22539 | Msa1416050:CDS | 30.0% |
| !! | TTCTAACAAGCTTTAACTTG+AGG | + | tig0024313:22521-22540 | Msa1416050:CDS | 30.0% |
| AGAAATTTGTGTGAGATACT+GGG | + | tig0024313:22736-22755 | Msa1416050:intron | 30.0% | |
| AAGAAATTTGTGTGAGATAC+TGG | + | tig0024313:22737-22756 | Msa1416050:intron | 30.0% | |
| !!! | TCTTTTTTTCTTCCTCCAAT+GGG | + | tig0024313:22930-22949 | Msa1416050:intron | 30.0% |
| ! | AGAGGGTTATGTTACTTAAT+AGG | + | tig0024313:22956-22975 | Msa1416050:intron | 30.0% |
| AAATAAATGAGGTGTACATG+TGG | - | tig0024313:23701-23720 | Msa1416040:intron | 30.0% | |
| AATAAATGAGGTGTACATGT+GGG | - | tig0024313:23702-23721 | Msa1416040:intron | 30.0% | |
| ! | ACTAATAGGGACTCTTTTAA+TGG | + | tig0024313:23730-23749 | None:intergenic | 30.0% |
| CACAATGTAGTACACTAATA+GGG | + | tig0024313:23743-23762 | None:intergenic | 30.0% | |
| !!! | GTTCTTAAACTTTTAAGACC+CGG | + | tig0024313:23820-23839 | None:intergenic | 30.0% |
| AAAAGTTTAAGAACCTCCAT+TGG | - | tig0024313:23826-23845 | Msa1416040:intron | 30.0% | |
| TACAGATACTTATAATCCCT+AGG | - | tig0024313:23875-23894 | Msa1416040:intron | 30.0% | |
| CTGGTTACCAATAATATTCA+AGG | + | tig0024313:24095-24114 | None:intergenic | 30.0% | |
| CTATCGATAACTATAGTCTT+TGG | + | tig0024313:24246-24265 | None:intergenic | 30.0% | |
| TCAATTTCATCTCTAGTGAA+AGG | + | tig0024313:24295-24314 | None:intergenic | 30.0% | |
| CTAGAGATGAAATTGAGAAA+AGG | - | tig0024313:24299-24318 | Msa1416040:intron | 30.0% | |
| ! | CTTGTTAGTGCATTTCTTTT+TGG | + | tig0024313:24417-24436 | None:intergenic | 30.0% |
| !! | GTCTGTTACTTCAGTATTTT+AGG | + | tig0024313:24477-24496 | None:intergenic | 30.0% |
| AATACTGAAGTAACAGACAT+TGG | - | tig0024313:24479-24498 | Msa1416040:intron | 30.0% | |
| ATACTGAAGTAACAGACATT+GGG | - | tig0024313:24480-24499 | Msa1416040:intron | 30.0% | |
| TGAAATAGCATAGAAACCTT+TGG | - | tig0024313:24581-24600 | Msa1416040:intron | 30.0% | |
| GAAATAGCATAGAAACCTTT+GGG | - | tig0024313:24582-24601 | Msa1416040:intron | 30.0% | |
| !! | TTTTTCAGTTTGGGAATGAT+GGG | + | tig0024313:24833-24852 | None:intergenic | 30.0% |
| !! | ATTTTTCAGTTTGGGAATGA+TGG | + | tig0024313:24834-24853 | None:intergenic | 30.0% |
| CCCAAACTGAAAAATAAACT+AGG | - | tig0024313:24839-24858 | Msa1416040:intron | 30.0% | |
| !! | CCCTAGTTTATTTTTCAGTT+TGG | + | tig0024313:24843-24862 | None:intergenic | 30.0% |
| AACTAAATCCCTTGATTACA+AGG | - | tig0024313:25046-25065 | Msa1416040:intron | 30.0% | |
| GTTCTTATCCTTGTAATCAA+GGG | + | tig0024313:25057-25076 | None:intergenic | 30.0% | |
| ATATCGCTAATTAGGTTTGT+TGG | + | tig0024313:25079-25098 | None:intergenic | 30.0% | |
| ! | AATGCAATGTTACCCTTTTA+AGG | - | tig0024313:25259-25278 | Msa1416040:intron | 30.0% |
| GTTTCAAATAAGGCCTTAAA+AGG | + | tig0024313:25275-25294 | None:intergenic | 30.0% | |
| !! | AAAATCTTAATGGACTAACC+CGG | - | tig0024313:25342-25361 | Msa1416040:intron | 30.0% |
| ! | AATAGGCTAAATACCTCTTT+TGG | + | tig0024313:25390-25409 | None:intergenic | 30.0% |
| !! | TCAGCAGTTATTTCTTCAAA+TGG | + | tig0024313:25549-25568 | None:intergenic | 30.0% |
| GTTTCAATTACTATTGGAGT+TGG | + | tig0024313:25650-25669 | None:intergenic | 30.0% | |
| CATAACCACACCTAATATAA+TGG | - | tig0024313:25801-25820 | Msa1416040:intron | 30.0% | |
| TTCTACCATTATATTAGGTG+TGG | + | tig0024313:25809-25828 | None:intergenic | 30.0% | |
| GCAAACGTTTATTCAAGAAA+CGG | - | tig0024313:26044-26063 | Msa1416040:intron | 30.0% | |
| ! | CAATGTTTGGTACTTTTAAG+TGG | + | tig0024313:26287-26306 | None:intergenic | 30.0% |
| ! | ACTGATTTCTGCTAAATCTT+TGG | - | tig0024313:26420-26439 | Msa1416040:intron | 30.0% |
| TGGTAACAAATAGGTCAAAA+TGG | - | tig0024313:26440-26459 | Msa1416040:intron | 30.0% | |
| GGTAACAAATAGGTCAAAAT+GGG | - | tig0024313:26441-26460 | Msa1416040:intron | 30.0% | |
| GTAACAAATAGGTCAAAATG+GGG | - | tig0024313:26442-26461 | Msa1416040:intron | 30.0% | |
| ! | ACCATACTCCATTTAAGATT+GGG | - | tig0024313:26897-26916 | Msa1416040:intron | 30.0% |
| !! | TTTTAGGCTCTTATTTCAAC+AGG | - | tig0024313:27068-27087 | Msa1416040:intron | 30.0% |
| ! | ATTGTACCATTTTGTGTTGT+TGG | - | tig0024313:27138-27157 | Msa1416040:intron | 30.0% |
| AAATTGCCAACAACACAAAA+TGG | + | tig0024313:27147-27166 | None:intergenic | 30.0% | |
| TTCACAATCTTATCACTGTA+TGG | + | tig0024313:27408-27427 | None:intergenic | 30.0% | |
| TAAGATTGTGAACTAATGAC+AGG | - | tig0024313:27416-27435 | Msa1416040:intron | 30.0% | |
| TATACAACCAGATGCTAATT+TGG | - | tig0024313:27580-27599 | Msa1416040:CDS | 30.0% | |
| GGAATGATGGTCAAAATAAA+AGG | + | tig0024313:28326-28345 | None:intergenic | 30.0% | |
| ! | ATCATTCCTTTAACTTAGCA+GGG | - | tig0024313:28338-28357 | Msa1416040:CDS | 30.0% |
| ATATATAGTGTACTAGTACG+AGG | - | tig0024313:28685-28704 | Msa1416040:CDS | 30.0% | |
| TCTTTATTGACCAGGATTGA+CGG | + | tig0024313:19245-19264 | None:intergenic | 35.0% | |
| GAGAAGAACTATCGCTAAAT+TGG | + | tig0024313:19286-19305 | None:intergenic | 35.0% | |
| !! | TGTTTAGATTACTTTTCCGG+TGG | + | tig0024313:19349-19368 | None:intergenic | 35.0% |
| ! | TCAAGGAACGTTTCTTTTAG+CGG | - | tig0024313:19492-19511 | Msa1416040:CDS | 35.0% |
| TTTGTGATGAGGTTGTTCAT+CGG | + | tig0024313:19745-19764 | None:intergenic | 35.0% | |
| GAAGATGAAATTAGGCAAGT+TGG | + | tig0024313:19785-19804 | None:intergenic | 35.0% | |
| !!! | GGTTTTGGTTGGGATTTTTT+AGG | - | tig0024313:19913-19932 | Msa1416040:intron | 35.0% |
| !!! | TTTGGTTGGGATTTTTTAGG+TGG | - | tig0024313:19916-19935 | Msa1416040:intron | 35.0% |
| ACATTTCATTCTACTCACTC+TGG | - | tig0024313:20077-20096 | Msa1416040:intron | 35.0% | |
| CTGATAATATTATCCTCCCT+CGG | + | tig0024313:20135-20154 | None:intergenic | 35.0% | |
| TTGTTGTATAGGATGGTCTA+TGG | - | tig0024313:20205-20224 | Msa1416040:CDS | 35.0% | |
| AAAGATGCAACAACGGATAT+TGG | + | tig0024313:20272-20291 | None:intergenic | 35.0% | |
| CCTCAAAACATTTGCAAGTT+GGG | + | tig0024313:20327-20346 | None:intergenic | 35.0% | |
| TCCTCAAAACATTTGCAAGT+TGG | + | tig0024313:20328-20347 | None:intergenic | 35.0% | |
| TAGTTTATCGACGCTTCATT+TGG | - | tig0024313:20609-20628 | Msa1416040:CDS | 35.0% | |
| ACATCAAGAAATGCCTTTGA+TGG | - | tig0024313:20640-20659 | Msa1416040:CDS | 35.0% | |
| CATCAAGAAATGCCTTTGAT+GGG | - | tig0024313:20641-20660 | Msa1416040:CDS | 35.0% | |
| ATTCTGATGACAATGATCGT+CGG | + | tig0024313:20802-20821 | None:intergenic | 35.0% | |
| !!! | ATGAAGGTTTTTTCTGCTGT+TGG | - | tig0024313:20825-20844 | Msa1416040:intron | 35.0% |
| !!! | TGAAGGTTTTTTCTGCTGTT+GGG | - | tig0024313:20826-20845 | Msa1416040:intron | 35.0% |
| ! | CTTAGTCATATTTTCCAAGC+TGG | - | tig0024313:21057-21076 | Msa1416040:intron | 35.0% |
| GTTCCATTATTGGATGTTTG+AGG | + | tig0024313:21291-21310 | Msa1416050:intron | 35.0% | |
| TGGCATACCTTTACATAACA+AGG | - | tig0024313:21341-21360 | Msa1416040:intron | 35.0% | |
| CGACATTTAATTGAACTCCA+TGG | - | tig0024313:21517-21536 | Msa1416040:intron | 35.0% | |
| TTTAATTGAACTCCATGGGA+CGG | - | tig0024313:21522-21541 | Msa1416040:intron | 35.0% | |
| !! | TATTCTCTGAGGCTTTCAAT+TGG | - | tig0024313:21563-21582 | Msa1416040:intron | 35.0% |
| ! | CCTTTTGGTCCATTTTCATA+TGG | + | tig0024313:22018-22037 | Msa1416050:intron | 35.0% |
| CCATATGAAAATGGACCAAA+AGG | - | tig0024313:22015-22034 | Msa1416040:intron | 35.0% | |
| ! | CTTAATGGTCTTTGTTTGTG+AGG | - | tig0024313:22146-22165 | Msa1416040:intron | 35.0% |
| ! | TAATGGTCTTTGTTTGTGAG+GGG | - | tig0024313:22148-22167 | Msa1416040:intron | 35.0% |
| ATTTGCACACCTCTATTAGA+GGG | + | tig0024313:22355-22374 | Msa1416050:intron | 35.0% | |
| TATTTGCACACCTCTATTAG+AGG | + | tig0024313:22356-22375 | Msa1416050:intron | 35.0% | |
| !! | CTAACAAGCTTTAACTTGAG+GGG | + | tig0024313:22519-22538 | Msa1416050:CDS | 35.0% |
| ! | GAGCATAAGACACTCATTTT+TGG | - | tig0024313:22626-22645 | Msa1416040:intron | 35.0% |
| AAATGAGTGATGTGTACACA+CGG | + | tig0024313:22667-22686 | Msa1416050:intron | 35.0% | |
| TATAGGTCCCACTTAAGATT+GGG | - | tig0024313:22820-22839 | Msa1416040:intron | 35.0% | |
| TAAGAACCCCAATCTTAAGT+GGG | + | tig0024313:22830-22849 | Msa1416050:intron | 35.0% | |
| TTAAGAACCCCAATCTTAAG+TGG | + | tig0024313:22831-22850 | Msa1416050:intron | 35.0% | |
| !! | TTGTAAAAGCATCTCCCATT+GGG | - | tig0024313:22866-22885 | Msa1416040:intron | 35.0% |
| !!! | TTTTTTTCTTCCTCCAATGG+GGG | + | tig0024313:22928-22947 | Msa1416050:intron | 35.0% |
| !!! | CTTTTTTTCTTCCTCCAATG+GGG | + | tig0024313:22929-22948 | Msa1416050:intron | 35.0% |
| !!! | CTCTTTTTTTCTTCCTCCAA+TGG | + | tig0024313:22931-22950 | Msa1416050:intron | 35.0% |
| TCCAATGGTAATACACTAAC+CGG | + | tig0024313:23641-23660 | None:intergenic | 35.0% | |
| ATAAATGAGGTGTACATGTG+GGG | - | tig0024313:23703-23722 | Msa1416040:intron | 35.0% | |
| CCACAATGTAGTACACTAAT+AGG | + | tig0024313:23744-23763 | None:intergenic | 35.0% | |
| CCTATTAGTGTACTACATTG+TGG | - | tig0024313:23741-23760 | Msa1416040:intron | 35.0% | |
| !!! | ATTGGGGAGAAACTTTTTCA+GGG | + | tig0024313:23778-23797 | None:intergenic | 35.0% |
| TGAAAAAGTTTCTCCCCAAT+GGG | - | tig0024313:23778-23797 | Msa1416040:intron | 35.0% | |
| CATACAGAGTCTGATTATAC+TGG | + | tig0024313:23998-24017 | None:intergenic | 35.0% | |
| !! | CTTACTAAGTGTTCAAGTTG+TGG | - | tig0024313:24036-24055 | Msa1416040:intron | 35.0% |
| !! | GTTGTGGAGTTCTAGATAAA+AGG | - | tig0024313:24052-24071 | Msa1416040:intron | 35.0% |
| ! | TCTGCGCATCTTTTTATTCA+AGG | + | tig0024313:24388-24407 | None:intergenic | 35.0% |
| AATAAAAAGATGCGCAGAAC+TGG | - | tig0024313:24390-24409 | Msa1416040:intron | 35.0% | |
| !! | ACTTCAGTATTTTAGGTCCT+TGG | + | tig0024313:24470-24489 | None:intergenic | 35.0% |
| ! | TTTTCGTTGCAAACATGTCT+AGG | + | tig0024313:24556-24575 | None:intergenic | 35.0% |
| GAAACAACTACGTGTTAGAT+AGG | - | tig0024313:24764-24783 | Msa1416040:intron | 35.0% | |
| CTAGTATTTCAAACCTTGCT+CGG | - | tig0024313:24899-24918 | Msa1416040:intron | 35.0% | |
| ! | GTTTTCTTTTCCAACGTGAA+GGG | + | tig0024313:24954-24973 | None:intergenic | 35.0% |
| GGTTCTTATCCTTGTAATCA+AGG | + | tig0024313:25058-25077 | None:intergenic | 35.0% | |
| AACAACTTAAAGGACTAACC+TGG | + | tig0024313:25206-25225 | None:intergenic | 35.0% | |
| CAAACTTAAAGGACCAAAAG+AGG | - | tig0024313:25374-25393 | Msa1416040:intron | 35.0% | |
| TGTGTGAGAAGCTTAAAACT+TGG | + | tig0024313:25423-25442 | None:intergenic | 35.0% | |
| TATCTTGAATAAACCCACAG+AGG | - | tig0024313:25494-25513 | Msa1416040:intron | 35.0% | |
| TTCTTCAAATGGATGTTTGG+AGG | + | tig0024313:25538-25557 | None:intergenic | 35.0% | |
| GTTGTTGCATCTACTAATTC+AGG | + | tig0024313:25672-25691 | None:intergenic | 35.0% | |
| AAGTTATGGCTTCTACTTAG+TGG | + | tig0024313:25743-25762 | None:intergenic | 35.0% | |
| TTAGGTGTGGTTATGCAATA+TGG | + | tig0024313:25796-25815 | None:intergenic | 35.0% | |
| ATTCTCCCAAGTACCAATTT+AGG | - | tig0024313:25905-25924 | Msa1416040:intron | 35.0% | |
| CTAAATTAGCCCACCTAAAT+TGG | + | tig0024313:25921-25940 | None:intergenic | 35.0% | |
| TTTCTGTTATTCGATTCTGC+TGG | + | tig0024313:26204-26223 | None:intergenic | 35.0% | |
| CATTTGAACAATAGCCAAAC+CGG | - | tig0024313:26307-26326 | Msa1416040:intron | 35.0% | |
| ATTTGAACAATAGCCAAACC+GGG | - | tig0024313:26308-26327 | Msa1416040:intron | 35.0% | |
| TTGTCTGTATGAAGTTACTC+TGG | + | tig0024313:26614-26633 | None:intergenic | 35.0% | |
| TAAACGCTAACCCCTATTTA+TGG | - | tig0024313:26715-26734 | Msa1416040:intron | 35.0% | |
| AAACGCTAACCCCTATTTAT+GGG | - | tig0024313:26716-26735 | Msa1416040:intron | 35.0% | |
| TCTTGTATCCCCATAAATAG+GGG | + | tig0024313:26728-26747 | None:intergenic | 35.0% | |
| CTCTTGTATCCCCATAAATA+GGG | + | tig0024313:26729-26748 | None:intergenic | 35.0% | |
| TCTCTTGTATCCCCATAAAT+AGG | + | tig0024313:26730-26749 | None:intergenic | 35.0% | |
| ! | GACCATACTCCATTTAAGAT+TGG | - | tig0024313:26896-26915 | Msa1416040:intron | 35.0% |
| ! | CCATACTCCATTTAAGATTG+GGG | - | tig0024313:26898-26917 | Msa1416040:intron | 35.0% |
| GTTTAACCAGCATAAATTCG+CGG | + | tig0024313:27183-27202 | None:intergenic | 35.0% | |
| TGAATATGAATCTGTTGAGC+TGG | - | tig0024313:27297-27316 | Msa1416040:CDS | 35.0% | |
| TGGAGAAACACCAAAATACT+TGG | + | tig0024313:27548-27567 | None:intergenic | 35.0% | |
| GAAAACTCCAAATTAGCATC+TGG | + | tig0024313:27590-27609 | None:intergenic | 35.0% | |
| AATTCTTTCTCATTTGCCTG+TGG | + | tig0024313:27926-27945 | None:intergenic | 35.0% | |
| GGCAAATGAGAAAGAATTAG+AGG | - | tig0024313:27928-27947 | Msa1416040:intron | 35.0% | |
| ATTCCAGTCAGATCAATTTG+AGG | + | tig0024313:28078-28097 | None:intergenic | 35.0% | |
| ATGACAACTAAAGAGGACAT+GGG | + | tig0024313:28256-28275 | None:intergenic | 35.0% | |
| CTGCTAAGTTAAAGGAATGA+TGG | + | tig0024313:28339-28358 | None:intergenic | 35.0% | |
| ! | CATCATTCCTTTAACTTAGC+AGG | - | tig0024313:28337-28356 | Msa1416040:CDS | 35.0% |
| TAATCGTGTAAATCATCACC+TGG | - | tig0024313:28460-28479 | Msa1416040:CDS | 35.0% | |
| AATCGTGTAAATCATCACCT+GGG | - | tig0024313:28461-28480 | Msa1416040:CDS | 35.0% | |
| ! | TGGTACAAGAGGATTTTCAA+TGG | - | tig0024313:28568-28587 | Msa1416040:CDS | 35.0% |
| ! | GGTACAAGAGGATTTTCAAT+GGG | - | tig0024313:28569-28588 | Msa1416040:CDS | 35.0% |
| CATGCTATATTAACAGCTAC+AGG | + | tig0024313:28605-28624 | None:intergenic | 35.0% | |
| ! | TGACGTGTTTTCATGCATTT+GGG | + | tig0024313:28641-28660 | None:intergenic | 35.0% |
| ! | TTGACGTGTTTTCATGCATT+TGG | + | tig0024313:28642-28661 | None:intergenic | 35.0% |
| GAGGAGATAAATGATGTCAA+AGG | + | tig0024313:28762-28781 | None:intergenic | 35.0% | |
| ! | TTGGTGACTCTTTATTGACC+AGG | + | tig0024313:19253-19272 | None:intergenic | 40.0% |
| CTGTTCTGCTTCAGTTCAAT+CGG | + | tig0024313:19308-19327 | None:intergenic | 40.0% | |
| !! | TAGATTACTTTTCCGGTGGT+TGG | + | tig0024313:19345-19364 | None:intergenic | 40.0% |
| AGCTGAAGAAGACGAGAAAA+TGG | - | tig0024313:19386-19405 | Msa1416040:three_prime_UTR | 40.0% | |
| TGAAGAAGACGAGAAAATGG+CGG | - | tig0024313:19389-19408 | Msa1416040:three_prime_UTR | 40.0% | |
| ! | TGAGGATGATGATGATGATC+TGG | + | tig0024313:19624-19643 | None:intergenic | 40.0% |
| TCATCATCCTCATCATCATC+AGG | - | tig0024313:19632-19651 | Msa1416040:CDS | 40.0% | |
| !! | GAGGATATTGATGATGAGAG+CGG | + | tig0024313:19668-19687 | None:intergenic | 40.0% |
| TTGTTCATCGGAATGAGGTT+TGG | + | tig0024313:19733-19752 | None:intergenic | 40.0% | |
| TTCCATGTTCCAACTTGACT+AGG | - | tig0024313:19806-19825 | Msa1416040:intron | 40.0% | |
| TCCATGTTCCAACTTGACTA+GGG | - | tig0024313:19807-19826 | Msa1416040:intron | 40.0% | |
| TGCATCTCTACAACTTGACT+TGG | - | tig0024313:19891-19910 | Msa1416040:intron | 40.0% | |
| GCATCTCTACAACTTGACTT+GGG | - | tig0024313:19892-19911 | Msa1416040:intron | 40.0% | |
| !!! | CTACAACTTGACTTGGGTTT+TGG | - | tig0024313:19898-19917 | Msa1416040:intron | 40.0% |
| !!! | AACTTGACTTGGGTTTTGGT+TGG | - | tig0024313:19902-19921 | Msa1416040:intron | 40.0% |
| !!! | ACTTGACTTGGGTTTTGGTT+GGG | - | tig0024313:19903-19922 | Msa1416040:intron | 40.0% |
| TTCATCAACAAAGACCCAGA+AGG | - | tig0024313:19989-20008 | Msa1416040:intron | 40.0% | |
| ! | AACAAAGACCCAGAAGGTTT+TGG | - | tig0024313:19995-20014 | Msa1416040:intron | 40.0% |
| ATTCAGCTACTCAGGGAAAA+AGG | + | tig0024313:20043-20062 | None:intergenic | 40.0% | |
| CGTAGTAATTCAGCTACTCA+GGG | + | tig0024313:20050-20069 | None:intergenic | 40.0% | |
| CCTGAGTAGCTGAATTACTA+CGG | - | tig0024313:20048-20067 | Msa1416040:intron | 40.0% | |
| ! | AAACATTTGCAAGTTGGGAG+TGG | + | tig0024313:20322-20341 | None:intergenic | 40.0% |
| ! | CCCAACTTGCAAATGTTTTG+AGG | - | tig0024313:20324-20343 | Msa1416040:intron | 40.0% |
| ACATCATCGATGAATTCTCC+AGG | - | tig0024313:20468-20487 | Msa1416040:intron | 40.0% | |
| TCCAGGTAGTTAGTGAAGAT+GGG | - | tig0024313:20485-20504 | Msa1416040:intron | 40.0% | |
| TAGCTCTTCAATGTCAGACT+CGG | + | tig0024313:20539-20558 | None:intergenic | 40.0% | |
| TTCTGATGACAATGATCGTC+GGG | + | tig0024313:20801-20820 | None:intergenic | 40.0% | |
| CCATTATTGGATGTTTGAGG+CGG | + | tig0024313:21288-21307 | Msa1416050:intron | 40.0% | |
| AGCAGACGAAGTTCCATTAT+TGG | + | tig0024313:21301-21320 | Msa1416050:intron | 40.0% | |
| AACTTCGTCTGCTTCTAGAT+CGG | - | tig0024313:21308-21327 | Msa1416040:intron | 40.0% | |
| TCTAGATCGGGAAAAGTTGA+TGG | - | tig0024313:21321-21340 | Msa1416040:intron | 40.0% | |
| AGAGAATATCACGTAAAGCG+TGG | + | tig0024313:21551-21570 | Msa1416050:intron | 40.0% | |
| GCTTTACGTGATATTCTCTG+AGG | - | tig0024313:21552-21571 | Msa1416040:intron | 40.0% | |
| ! | AATGGTCTTTGTTTGTGAGG+GGG | - | tig0024313:22149-22168 | Msa1416040:intron | 40.0% |
| TTTGTTTGTGAGGGGGATTT+GGG | - | tig0024313:22156-22175 | Msa1416040:intron | 40.0% | |
| TTTGCACACCTCTATTAGAG+GGG | + | tig0024313:22354-22373 | Msa1416050:intron | 40.0% | |
| GCTCTTCACACATTCATCAA+TGG | + | tig0024313:22554-22573 | Msa1416050:CDS | 40.0% | |
| AATGAGTGATGTGTACACAC+GGG | + | tig0024313:22666-22685 | Msa1416050:intron | 40.0% | |
| ATTTGTGTGAGATACTGGGT+TGG | + | tig0024313:22732-22751 | Msa1416050:intron | 40.0% | |
| GTATAGGTCCCACTTAAGAT+TGG | - | tig0024313:22819-22838 | Msa1416040:intron | 40.0% | |
| ATAGGTCCCACTTAAGATTG+GGG | - | tig0024313:22821-22840 | Msa1416040:intron | 40.0% | |
| ! | AGATGCTTTTACAAGACTCG+GGG | + | tig0024313:22860-22879 | Msa1416050:intron | 40.0% |
| ! | GAGATGCTTTTACAAGACTC+GGG | + | tig0024313:22861-22880 | Msa1416050:intron | 40.0% |
| ! | GGAGATGCTTTTACAAGACT+CGG | + | tig0024313:22862-22881 | Msa1416050:intron | 40.0% |
| !! | CTTGTAAAAGCATCTCCCAT+TGG | - | tig0024313:22865-22884 | Msa1416040:intron | 40.0% |
| !! | TGTAAAAGCATCTCCCATTG+GGG | - | tig0024313:22867-22886 | Msa1416040:intron | 40.0% |
| GTTAAGTAAGGAACCCCAAT+GGG | + | tig0024313:22883-22902 | Msa1416050:intron | 40.0% | |
| TGTTAAGTAAGGAACCCCAA+TGG | + | tig0024313:22884-22903 | Msa1416050:intron | 40.0% | |
| ! | GGAGTGGTACTTGTTAAGTA+AGG | + | tig0024313:22895-22914 | Msa1416050:intron | 40.0% |
| TCCAATGGTAATACGCTAAC+CGG | + | tig0024313:23143-23162 | Msa1416050:intron | 40.0% | |
| TAACGACTCAATGACTCCAA+TGG | + | tig0024313:23158-23177 | Msa1416050:intron | 40.0% | |
| GGAGTCATTGAGTCGTTAAT+AGG | - | tig0024313:23160-23179 | Msa1416040:intron | 40.0% | |
| TCCAATGGTAATACCCTAAC+CGG | + | tig0024313:23392-23411 | Msa1416050:intron | 40.0% | |
| TAACGACTCAATGACTCCAA+TGG | + | tig0024313:23158-23177 | Msa1416050:intron | 40.0% | |
| GGAGTCATTGAGTCGTTAAT+AGG | - | tig0024313:23160-23179 | Msa1416040:intron | 40.0% | |
| CCAATGGTAATACACTAACC+GGG | + | tig0024313:23640-23659 | None:intergenic | 40.0% | |
| TAACGACTCAATGACTCCAA+TGG | + | tig0024313:23158-23177 | Msa1416050:intron | 40.0% | |
| GGAGTCATTGAGTCGTTAAT+AGG | - | tig0024313:23160-23179 | Msa1416040:intron | 40.0% | |
| !! | CATTGGGGAGAAACTTTTTC+AGG | + | tig0024313:23779-23798 | None:intergenic | 40.0% |
| CTGAAAAAGTTTCTCCCCAA+TGG | - | tig0024313:23777-23796 | Msa1416040:intron | 40.0% | |
| GAAAAAGTTTCTCCCCAATG+GGG | - | tig0024313:23779-23798 | Msa1416040:intron | 40.0% | |
| AAAAAGTTTCTCCCCAATGG+GGG | - | tig0024313:23780-23799 | Msa1416040:intron | 40.0% | |
| ! | TTTAAGACCCGGTACCTATT+AGG | + | tig0024313:23809-23828 | None:intergenic | 40.0% |
| TTAAGAACCTCCATTGGAGA+TGG | - | tig0024313:23832-23851 | Msa1416040:intron | 40.0% | |
| CATTGAACAACCATCTCCAA+TGG | + | tig0024313:23845-23864 | None:intergenic | 40.0% | |
| CTTTAGTGAGCTGTCAGTTA+TGG | + | tig0024313:23916-23935 | None:intergenic | 40.0% | |
| AGTCTGTATCAAGTGGTTAC+TGG | + | tig0024313:24114-24133 | None:intergenic | 40.0% | |
| ACCACTTGATACAGACTTGT+TGG | - | tig0024313:24117-24136 | Msa1416040:intron | 40.0% | |
| ACCAACAAGTCTGTATCAAG+TGG | + | tig0024313:24121-24140 | None:intergenic | 40.0% | |
| !! | CTTGATACAGACTTGTTGGT+TGG | - | tig0024313:24121-24140 | Msa1416040:intron | 40.0% |
| AATGTCAAGGTTGAGTCCTT+GGG | + | tig0024313:24205-24224 | None:intergenic | 40.0% | |
| GTGAAAGGCTCTCTAATCAT+TGG | + | tig0024313:24280-24299 | None:intergenic | 40.0% | |
| GCACTAACAAGACATAGTGA+AGG | - | tig0024313:24426-24445 | Msa1416040:intron | 40.0% | |
| CAAGACATAGTGAAGGTCTA+AGG | - | tig0024313:24433-24452 | Msa1416040:intron | 40.0% | |
| ! | TTTAGGTCCTTGGTGACAAT+AGG | + | tig0024313:24460-24479 | None:intergenic | 40.0% |
| TAAACTAGGGTTTGCGTTGA+CGG | - | tig0024313:24853-24872 | Msa1416040:intron | 40.0% | |
| ! | AGTTTTCTCTTTTCCGAGCA+AGG | + | tig0024313:24915-24934 | None:intergenic | 40.0% |
| ! | GGTTTTCTTTTCCAACGTGA+AGG | + | tig0024313:24955-24974 | None:intergenic | 40.0% |
| ! | TCTAGGCCAAATACCTCTTT+TGG | - | tig0024313:25159-25178 | Msa1416040:intron | 40.0% |
| TCCCAAGTACCAATTTAGGT+GGG | - | tig0024313:25909-25928 | Msa1416040:intron | 40.0% | |
| !! | CTAGTGGGTCCAACTTTTAA+TGG | + | tig0024313:26089-26108 | None:intergenic | 40.0% |
| TTAAAAGTTGGACCCACTAG+CGG | - | tig0024313:26089-26108 | Msa1416040:intron | 40.0% | |
| AAGGCCTAAAGATCTGAACA+AGG | - | tig0024313:26168-26187 | Msa1416040:intron | 40.0% | |
| TGGTCCTTGTTCAGATCTTT+AGG | + | tig0024313:26175-26194 | None:intergenic | 40.0% | |
| !! | TTCGATTCTGCTGGTTTAGT+TGG | + | tig0024313:26195-26214 | None:intergenic | 40.0% |
| !! | GTTTGGTACTTTTAAGTGGC+TGG | + | tig0024313:26283-26302 | None:intergenic | 40.0% |
| !! | GATCTCTCCTCTTGCTATTT+GGG | + | tig0024313:26334-26353 | None:intergenic | 40.0% |
| CAAATAGCAAGAGGAGAGAT+CGG | - | tig0024313:26333-26352 | Msa1416040:intron | 40.0% | |
| GGTGAACACACTGTAAGAAA+CGG | - | tig0024313:26354-26373 | Msa1416040:intron | 40.0% | |
| AACGCTAACCCCTATTTATG+GGG | - | tig0024313:26717-26736 | Msa1416040:intron | 40.0% | |
| CCCCAATCTTAAATGGAGTA+TGG | + | tig0024313:26901-26920 | None:intergenic | 40.0% | |
| ! | TACTCCATTTAAGATTGGGG+CGG | - | tig0024313:26901-26920 | Msa1416040:intron | 40.0% |
| TATTTGCAGGCAAAGCTCTT+TGG | + | tig0024313:26959-26978 | None:intergenic | 40.0% | |
| AGAAGTCAAAGCAGCAAATC+AGG | + | tig0024313:26997-27016 | None:intergenic | 40.0% | |
| GTCTACTGCAAATCACAAGA+CGG | + | tig0024313:27094-27113 | None:intergenic | 40.0% | |
| AATGCAAGTTGCAACACAAG+TGG | + | tig0024313:27121-27140 | None:intergenic | 40.0% | |
| TATTAGCCGCGAATTTATGC+TGG | - | tig0024313:27174-27193 | Msa1416040:intron | 40.0% | |
| ! | ATGCTGGTTAAACATGCAAG+TGG | - | tig0024313:27190-27209 | Msa1416040:intron | 40.0% |
| GAAATGATTCTCTGCCAACT+CGG | + | tig0024313:27353-27372 | None:intergenic | 40.0% | |
| AGTTGGCAGAGAATCATTTC+AGG | - | tig0024313:27353-27372 | Msa1416040:intron | 40.0% | |
| GTCACTGAGCTAAATGATGA+GGG | - | tig0024313:27438-27457 | Msa1416040:intron | 40.0% | |
| TCACTGAGCTAAATGATGAG+GGG | - | tig0024313:27439-27458 | Msa1416040:intron | 40.0% | |
| TAAATCGACCATCTCTAGTC+TGG | - | tig0024313:27725-27744 | Msa1416040:intron | 40.0% | |
| TGATGTTGAAGTTAGCTGTG+AGG | - | tig0024313:27877-27896 | Msa1416040:intron | 40.0% | |
| CATGACAACTAAAGAGGACA+TGG | + | tig0024313:28257-28276 | None:intergenic | 40.0% | |
| TCTTCTCCCTGCTAAGTTAA+AGG | + | tig0024313:28347-28366 | None:intergenic | 40.0% | |
| CATGGTTATGAGAAAGAGAG+CGG | - | tig0024313:28368-28387 | Msa1416040:CDS | 40.0% | |
| GAAAATCCTCTTGTACCATC+TGG | + | tig0024313:28566-28585 | None:intergenic | 40.0% | |
| ! | CAAGAGGATTTTCAATGGGT+CGG | - | tig0024313:28573-28592 | Msa1416040:CDS | 40.0% |
| ! | AAGAGGATTTTCAATGGGTC+GGG | - | tig0024313:28574-28593 | Msa1416040:CDS | 40.0% |
| TATAGTGTACTAGTACGAGG+CGG | - | tig0024313:28688-28707 | Msa1416040:CDS | 40.0% | |
| TGAAGTGGAAGTGGAAGTGA+TGG | - | tig0024313:19190-19209 | Msa1416040:three_prime_UTR | 45.0% | |
| GAAGTGGAAGTGGAAGTGAT+GGG | - | tig0024313:19191-19210 | Msa1416040:three_prime_UTR | 45.0% | |
| ! | AATGGCGGAAGAAGAAGAGT+CGG | - | tig0024313:19404-19423 | Msa1416040:three_prime_UTR | 45.0% |
| !! | GACGATGATGATGGATCTGA+CGG | + | tig0024313:19459-19478 | None:intergenic | 45.0% |
| ! | AGAAGATGATGATGTAGCGG+AGG | + | tig0024313:19582-19601 | None:intergenic | 45.0% |
| ! | TGATGATGATGATCTGGTGG+TGG | + | tig0024313:19618-19637 | None:intergenic | 45.0% |
| ! | GGATGATGATGATGATCTGG+TGG | + | tig0024313:19621-19640 | None:intergenic | 45.0% |
| TCATCCTCATCATCATCAGG+TGG | - | tig0024313:19635-19654 | Msa1416040:CDS | 45.0% | |
| ! | TGAACCACCTGATGATGATG+AGG | + | tig0024313:19642-19661 | None:intergenic | 45.0% |
| !! | TGAGGTTTGGCTTTGGAAGA+AGG | + | tig0024313:19720-19739 | None:intergenic | 45.0% |
| ! | ATCGGAATGAGGTTTGGCTT+TGG | + | tig0024313:19727-19746 | None:intergenic | 45.0% |
| TGAGGTTGTTCATCGGAATG+AGG | + | tig0024313:19738-19757 | None:intergenic | 45.0% | |
| !! | ACCCTAGTCAAGTTGGAACA+TGG | + | tig0024313:19811-19830 | None:intergenic | 45.0% |
| ATGTTCCAACTTGACTAGGG+TGG | - | tig0024313:19810-19829 | Msa1416040:intron | 45.0% | |
| ATGAACCACCCTAGTCAAGT+TGG | + | tig0024313:19818-19837 | None:intergenic | 45.0% | |
| CCGTAGTAATTCAGCTACTC+AGG | + | tig0024313:20051-20070 | None:intergenic | 45.0% | |
| CTCCAGGTAGTTAGTGAAGA+TGG | - | tig0024313:20484-20503 | Msa1416040:intron | 45.0% | |
| TCCCATCTTCACTAACTACC+TGG | + | tig0024313:20489-20508 | None:intergenic | 45.0% | |
| ! | TTCAATGTCAGACTCGGTTG+GGG | + | tig0024313:20533-20552 | None:intergenic | 45.0% |
| ! | CTTCAATGTCAGACTCGGTT+GGG | + | tig0024313:20534-20553 | None:intergenic | 45.0% |
| ! | TCTTCAATGTCAGACTCGGT+TGG | + | tig0024313:20535-20554 | None:intergenic | 45.0% |
| ! | ATGATCGTCGGGTAGGTTTT+CGG | + | tig0024313:20790-20809 | None:intergenic | 45.0% |
| !!! | AGGTTTTTTCTGCTGTTGGG+AGG | - | tig0024313:20829-20848 | Msa1416040:intron | 45.0% |
| CCGCCTCAAACATCCAATAA+TGG | - | tig0024313:21285-21304 | Msa1416040:intron | 45.0% | |
| ACTTCGTCTGCTTCTAGATC+GGG | - | tig0024313:21309-21328 | Msa1416040:intron | 45.0% | |
| TTCATGGCTTCATGCATGCA+CGG | + | tig0024313:21374-21393 | Msa1416050:intron | 45.0% | |
| ! | CTTTGTTTGTGAGGGGGATT+TGG | - | tig0024313:22155-22174 | Msa1416040:intron | 45.0% |
| TTGTTTGTGAGGGGGATTTG+GGG | - | tig0024313:22157-22176 | Msa1416040:intron | 45.0% | |
| TTGCACACCTCTATTAGAGG+GGG | + | tig0024313:22353-22372 | Msa1416050:intron | 45.0% | |
| ! | TTAACTTGAGGGGACGTGTT+AGG | + | tig0024313:22509-22528 | Msa1416050:CDS | 45.0% |
| GAGGGATTGAGTGGCTTATT+AGG | + | tig0024313:22710-22729 | Msa1416050:intron | 45.0% | |
| ACAAGTACCACTCCCTGTTT+AGG | - | tig0024313:22901-22920 | Msa1416040:intron | 45.0% | |
| TTAAAAGTGGGGGAGAGAGA+GGG | + | tig0024313:22973-22992 | Msa1416050:intron | 45.0% | |
| TTTAAAAGTGGGGGAGAGAG+AGG | + | tig0024313:22974-22993 | Msa1416050:intron | 45.0% | |
| ! | AGCACTTTTCATTGGAGTCC+CGG | - | tig0024313:23121-23140 | Msa1416040:intron | 45.0% |
| CCAATGGTAATACGCTAACC+GGG | + | tig0024313:23142-23161 | Msa1416050:intron | 45.0% | |
| ! | AGCACTTTTCATTGGAGTCC+CGG | - | tig0024313:23121-23140 | Msa1416040:intron | 45.0% |
| ! | TTTTCATTGGAGTCCCGGTT+AGG | - | tig0024313:23126-23145 | Msa1416040:intron | 45.0% |
| TTTCATTGGAGTCCCGGTTA+GGG | - | tig0024313:23127-23146 | Msa1416040:intron | 45.0% | |
| CCAATGGTAATACCCTAACC+GGG | + | tig0024313:23391-23410 | Msa1416050:intron | 45.0% | |
| ! | AGCACTTTTCATTGGAGTCC+CGG | - | tig0024313:23121-23140 | Msa1416040:intron | 45.0% |
| CCCGGTTAGTGTATTACCAT+TGG | - | tig0024313:23637-23656 | Msa1416040:intron | 45.0% | |
| AAAAGTTTCTCCCCAATGGG+GGG | - | tig0024313:23781-23800 | Msa1416040:intron | 45.0% | |
| TGAACAACCATCTCCAATGG+AGG | + | tig0024313:23842-23861 | None:intergenic | 45.0% | |
| CAATGTCAAGGTTGAGTCCT+TGG | + | tig0024313:24206-24225 | None:intergenic | 45.0% | |
| CAAGGACTCAACCTTGACAT+TGG | - | tig0024313:24204-24223 | Msa1416040:intron | 45.0% | |
| GACTCAACCTTGACATTGGT+TGG | - | tig0024313:24208-24227 | Msa1416040:intron | 45.0% | |
| ! | CTTGACATTGGTTGGACGAA+GGG | - | tig0024313:24216-24235 | Msa1416040:intron | 45.0% |
| CTAAGGACCTATTGTCACCA+AGG | - | tig0024313:24450-24469 | Msa1416040:intron | 45.0% | |
| ACATTGGGATGCAATCACAG+CGG | - | tig0024313:24495-24514 | Msa1416040:intron | 45.0% | |
| TGACTGTTGCTGTAGTGTTG+TGG | + | tig0024313:24528-24547 | None:intergenic | 45.0% | |
| ! | GTTGCAAACATGTCTAGGAC+AGG | + | tig0024313:24551-24570 | None:intergenic | 45.0% |
| ! | ACGTTTAAGGTGTGTCCCAA+AGG | + | tig0024313:24600-24619 | None:intergenic | 45.0% |
| ! | TTTGGGACACACCTTAAACG+TGG | - | tig0024313:24599-24618 | Msa1416040:intron | 45.0% |
| ATCTGTGGGATCCACGTTTA+AGG | + | tig0024313:24613-24632 | None:intergenic | 45.0% | |
| TAAACGTGGATCCCACAGAT+TGG | - | tig0024313:24613-24632 | Msa1416040:intron | 45.0% | |
| ATCCCACAGATTGGAAGGAA+GGG | - | tig0024313:24622-24641 | Msa1416040:intron | 45.0% | |
| TTAGTCATGTCAGCACGTGA+AGG | + | tig0024313:24707-24726 | None:intergenic | 45.0% | |
| AACTACGTGTTAGATAGGCG+CGG | - | tig0024313:24769-24788 | Msa1416040:intron | 45.0% | |
| !! | TGGGAATGATGGGTGTTCAA+GGG | + | tig0024313:24823-24842 | None:intergenic | 45.0% |
| !! | TTGGGAATGATGGGTGTTCA+AGG | + | tig0024313:24824-24843 | None:intergenic | 45.0% |
| TATATTCCCACCCTTCACGT+TGG | - | tig0024313:24941-24960 | Msa1416040:intron | 45.0% | |
| ! | TCTTTTCCAACGTGAAGGGT+GGG | + | tig0024313:24950-24969 | None:intergenic | 45.0% |
| ! | TTCTTTTCCAACGTGAAGGG+TGG | + | tig0024313:24951-24970 | None:intergenic | 45.0% |
| TCTTCAGCACAAACCTCTGT+GGG | + | tig0024313:25510-25529 | None:intergenic | 45.0% | |
| TTCTTCAGCACAAACCTCTG+TGG | + | tig0024313:25511-25530 | None:intergenic | 45.0% | |
| ! | TGCTGACTGTCACGAACAAT+AGG | - | tig0024313:25563-25582 | Msa1416040:intron | 45.0% |
| ! | TGCTGACTGTCACGAACAAT+AGG | - | tig0024313:25563-25582 | Msa1416040:intron | 45.0% |
| GGATGTATGCTTCTGTTGAG+TGG | + | tig0024313:25775-25794 | None:intergenic | 45.0% | |
| ATGGTAGAAGCTAACCCACT+TGG | - | tig0024313:25820-25839 | Msa1416040:intron | 45.0% | |
| TGGTAGAAGCTAACCCACTT+GGG | - | tig0024313:25821-25840 | Msa1416040:intron | 45.0% | |
| !! | GTGGTATTGGCTTGGGATTT+GGG | - | tig0024313:25852-25871 | Msa1416040:intron | 45.0% |
| GAATCGAACTTGAGACCTCA+AGG | + | tig0024313:25889-25908 | None:intergenic | 45.0% | |
| CTCCCAAGTACCAATTTAGG+TGG | - | tig0024313:25908-25927 | Msa1416040:intron | 45.0% | |
| GCCCACCTAAATTGGTACTT+GGG | + | tig0024313:25913-25932 | None:intergenic | 45.0% | |
| AGCCCACCTAAATTGGTACT+TGG | + | tig0024313:25914-25933 | None:intergenic | 45.0% | |
| GTCACAAGCCAAGAATCACA+TGG | - | tig0024313:26116-26135 | Msa1416040:intron | 45.0% | |
| ! | CTCACTACTGCACGTTTTCT+GGG | + | tig0024313:26236-26255 | None:intergenic | 45.0% |
| !! | CGATCTCTCCTCTTGCTATT+TGG | + | tig0024313:26335-26354 | None:intergenic | 45.0% |
| !! | GTTGGTGCTGGAAAATTCTC+CGG | - | tig0024313:26471-26490 | Msa1416040:intron | 45.0% |
| !!! | TTCCTGTCGTTTTCTCTCCT+CGG | + | tig0024313:26554-26573 | None:intergenic | 45.0% |
| TGGTCAGCGTGAGGAAAAAA+AGG | + | tig0024313:26881-26900 | None:intergenic | 45.0% | |
| ! | ATTTAAGATTGGGGCGGCTT+GGG | - | tig0024313:26907-26926 | Msa1416040:intron | 45.0% |
| GGTCACTGAGCTAAATGATG+AGG | - | tig0024313:27437-27456 | Msa1416040:intron | 45.0% | |
| AGCTAAATGATGAGGGGAAC+TGG | - | tig0024313:27445-27464 | Msa1416040:intron | 45.0% | |
| TAAATGATGAGGGGAACTGG+CGG | - | tig0024313:27448-27467 | Msa1416040:intron | 45.0% | |
| GTCTAAGCATTAGACGAACC+CGG | + | tig0024313:27482-27501 | None:intergenic | 45.0% | |
| TCGTCTAATGCTTAGACGCA+CGG | - | tig0024313:27485-27504 | Msa1416040:intron | 45.0% | |
| TTCCAGTCAAAACCTACTCC+TGG | - | tig0024313:27836-27855 | Msa1416040:intron | 45.0% | |
| AGTCAAAACCTACTCCTGGA+CGG | - | tig0024313:27840-27859 | Msa1416040:intron | 45.0% | |
| TGTTGAAGTTAGCTGTGAGG+AGG | - | tig0024313:27880-27899 | Msa1416040:intron | 45.0% | |
| CCAGTCAGATCAATTTGAGG+TGG | + | tig0024313:28075-28094 | None:intergenic | 45.0% | |
| CCACCTCAAATTGATCTGAC+TGG | - | tig0024313:28072-28091 | Msa1416040:intron | 45.0% | |
| ACAGCACATAACTGTGCTAC+GGG | + | tig0024313:28289-28308 | None:intergenic | 45.0% | |
| CACAGCACATAACTGTGCTA+CGG | + | tig0024313:28290-28309 | None:intergenic | 45.0% | |
| TAGCACAGTTATGTGCTGTG+TGG | - | tig0024313:28290-28309 | Msa1416040:intron | 45.0% | |
| ATGAGAAAGAGAGCGGACAT+AGG | - | tig0024313:28375-28394 | Msa1416040:CDS | 45.0% | |
| AAAGAGAGCGGACATAGGAA+GGG | - | tig0024313:28380-28399 | Msa1416040:CDS | 45.0% | |
| TATTTGAAGGGGAAGTTCCC+AGG | + | tig0024313:28481-28500 | None:intergenic | 45.0% | |
| ! | AGAGGATTTTCAATGGGTCG+GGG | - | tig0024313:28575-28594 | Msa1416040:CDS | 45.0% |
| AAAACACGTCAACGCTGGAA+CGG | - | tig0024313:28650-28669 | Msa1416040:CDS | 45.0% | |
| !!! | TTTTATTATTAAAAAAGTAT+AGG | - | tig0024313:22803-22822 | Msa1416040:intron | 5.0% |
| !! | TAAAAAATTATAAATAAATG+AGG | - | tig0024313:23192-23211 | Msa1416040:intron | 5.0% |
| !! | TAAAAAATTATAAATAAATG+AGG | - | tig0024313:23192-23211 | Msa1416040:intron | 5.0% |
| !! | TAAAAAATTATAAATAAATG+AGG | - | tig0024313:23192-23211 | Msa1416040:intron | 5.0% |
| !!! | ATTTTTATTTTATTTTTGTA+TGG | - | tig0024313:26573-26592 | Msa1416040:intron | 5.0% |
| !! | AATAATAAGAAATATAATTA+TGG | - | tig0024313:26646-26665 | Msa1416040:intron | 5.0% |
| !!! | ATTTATTTTCTATTTAAATA+TGG | - | tig0024313:28723-28742 | Msa1416040:five_prime_UTR | 5.0% |
| !!! | ATGGGCCTGTGTGGTTTTGT+GGG | - | tig0024313:19209-19228 | Msa1416040:three_prime_UTR | 50.0% |
| TGACGGCGAGATCACTACTT+GGG | + | tig0024313:19442-19461 | None:intergenic | 50.0% | |
| GATGACGACGACGATGATGA+TGG | + | tig0024313:19468-19487 | None:intergenic | 50.0% | |
| CGTCGTCGTCATCTCTTTCA+AGG | - | tig0024313:19475-19494 | Msa1416040:exon | 50.0% | |
| ! | TTTTAGCGGTCTCAACGCTC+AGG | - | tig0024313:19506-19525 | Msa1416040:CDS | 50.0% |
| ! | AGATGATGATGTAGCGGAGG+AGG | + | tig0024313:19579-19598 | None:intergenic | 50.0% |
| !! | TGATGATGATCTGGTGGTGG+TGG | + | tig0024313:19615-19634 | None:intergenic | 50.0% |
| TCTGGCTGCTCAACTTCTTG+AGG | + | tig0024313:19690-19709 | None:intergenic | 50.0% | |
| ! | TTGGAAGAAGGAGTGTGCTC+TGG | + | tig0024313:19708-19727 | None:intergenic | 50.0% |
| ! | AGGGGGTGCAGTAAGTGATA+AGG | + | tig0024313:20106-20125 | None:intergenic | 50.0% |
| TATCCTCCCTCGGAAAGAGA+GGG | + | tig0024313:20125-20144 | None:intergenic | 50.0% | |
| TTATCCTCCCTCGGAAAGAG+AGG | + | tig0024313:20126-20145 | None:intergenic | 50.0% | |
| ! | TTGGGAGTGGCTGGTTATGA+GGG | + | tig0024313:20309-20328 | None:intergenic | 50.0% |
| ! | ATTTGCAAGTTGGGAGTGGC+TGG | + | tig0024313:20318-20337 | None:intergenic | 50.0% |
| GATGACAATGATCGTCGGGT+AGG | + | tig0024313:20797-20816 | None:intergenic | 50.0% | |
| ! | ATGTTTGAGGCGGACAGGTA+CGG | + | tig0024313:21278-21297 | Msa1416050:intron | 50.0% |
| ! | ATTGGATGTTTGAGGCGGAC+AGG | + | tig0024313:21283-21302 | Msa1416050:intron | 50.0% |
| TGTTTGTGAGGGGGATTTGG+GGG | - | tig0024313:22158-22177 | Msa1416040:intron | 50.0% | |
| ACACCTCTATTAGAGGGGGA+GGG | + | tig0024313:22349-22368 | Msa1416050:intron | 50.0% | |
| ! | GTGTGAGATACTGGGTTGGA+GGG | + | tig0024313:22728-22747 | Msa1416050:intron | 50.0% |
| ! | TGTGTGAGATACTGGGTTGG+AGG | + | tig0024313:22729-22748 | Msa1416050:intron | 50.0% |
| TCCAATGGGGGTCCTAAACA+GGG | + | tig0024313:22916-22935 | Msa1416050:intron | 50.0% | |
| CCCGGTTAGCGTATTACCAT+TGG | - | tig0024313:23139-23158 | Msa1416040:intron | 50.0% | |
| ! | CCCGGTTAGGGTATTACCAT+TGG | - | tig0024313:23388-23407 | Msa1416040:intron | 50.0% |
| CTATTAGGTACCCCCCATTG+GGG | + | tig0024313:23794-23813 | None:intergenic | 50.0% | |
| CCTATTAGGTACCCCCCATT+GGG | + | tig0024313:23795-23814 | None:intergenic | 50.0% | |
| ACCTATTAGGTACCCCCCAT+TGG | + | tig0024313:23796-23815 | None:intergenic | 50.0% | |
| GCAGCTGTCTCACAAACCTA+GGG | + | tig0024313:23894-23913 | None:intergenic | 50.0% | |
| !! | CAGACTTGTTGGTTGGACGA+CGG | - | tig0024313:24128-24147 | Msa1416040:intron | 50.0% |
| !! | AGACTTGTTGGTTGGACGAC+GGG | - | tig0024313:24129-24148 | Msa1416040:intron | 50.0% |
| GTCATCAGTGACTGATCCCA+AGG | - | tig0024313:24186-24205 | Msa1416040:intron | 50.0% | |
| CCTTCGTCCAACCAATGTCA+AGG | + | tig0024313:24218-24237 | None:intergenic | 50.0% | |
| ! | CCTTGACATTGGTTGGACGA+AGG | - | tig0024313:24215-24234 | Msa1416040:intron | 50.0% |
| GATGCAATCACAGCGGCAAA+AGG | - | tig0024313:24502-24521 | Msa1416040:intron | 50.0% | |
| GATCCCACAGATTGGAAGGA+AGG | - | tig0024313:24621-24640 | Msa1416040:intron | 50.0% | |
| TCCCACAGATTGGAAGGAAG+GGG | - | tig0024313:24623-24642 | Msa1416040:intron | 50.0% | |
| TCCCCTTCCTTCCAATCTGT+GGG | + | tig0024313:24627-24646 | None:intergenic | 50.0% | |
| GGAACCAACAATGACCCAGT+CGG | - | tig0024313:24659-24678 | Msa1416040:intron | 50.0% | |
| CGTGACAGTCAGCAGAAGTT+TGG | + | tig0024313:25593-25612 | None:intergenic | 50.0% | |
| AGAAGCTAACCCACTTGGGT+TGG | - | tig0024313:25825-25844 | Msa1416040:intron | 50.0% | |
| AATCCCAAGCCAATACCACC+AGG | + | tig0024313:25851-25870 | None:intergenic | 50.0% | |
| !! | GGTGGTATTGGCTTGGGATT+TGG | - | tig0024313:25851-25870 | Msa1416040:intron | 50.0% |
| TCGAACTTGAGACCTCAAGG+AGG | + | tig0024313:25886-25905 | None:intergenic | 50.0% | |
| AGCTAAAACCACGCCAAGTG+AGG | - | tig0024313:25966-25985 | Msa1416040:intron | 50.0% | |
| TTATTCAGCCTCACTTGGCG+TGG | + | tig0024313:25977-25996 | None:intergenic | 50.0% | |
| TGCGGTTATTCAGCCTCACT+TGG | + | tig0024313:25982-26001 | None:intergenic | 50.0% | |
| CGTCGGTACCATGTGATTCT+TGG | + | tig0024313:26127-26146 | None:intergenic | 50.0% | |
| ! | TTCAGCCATTGCCTTGTTGG+GGG | + | tig0024313:26150-26169 | None:intergenic | 50.0% |
| ! | CTTCAGCCATTGCCTTGTTG+GGG | + | tig0024313:26151-26170 | None:intergenic | 50.0% |
| ! | CCTTCAGCCATTGCCTTGTT+GGG | + | tig0024313:26152-26171 | None:intergenic | 50.0% |
| ! | GCTCACTACTGCACGTTTTC+TGG | + | tig0024313:26237-26256 | None:intergenic | 50.0% |
| !! | CTTTTAAGTGGCTGGCGTCT+TGG | + | tig0024313:26275-26294 | None:intergenic | 50.0% |
| CAGCGCAAACAATTGTGCAG+CGG | - | tig0024313:26377-26396 | Msa1416040:intron | 50.0% | |
| GTCAAAATGGGGTGAGCTGT+TGG | - | tig0024313:26453-26472 | Msa1416040:intron | 50.0% | |
| AATGGAGTATGGTCAGCGTG+AGG | + | tig0024313:26890-26909 | None:intergenic | 50.0% | |
| CAAGCCGCCCCAATCTTAAA+TGG | + | tig0024313:26908-26927 | None:intergenic | 50.0% | |
| ! | CATTTAAGATTGGGGCGGCT+TGG | - | tig0024313:26906-26925 | Msa1416040:intron | 50.0% |
| ! | TTTAAGATTGGGGCGGCTTG+GGG | - | tig0024313:26908-26927 | Msa1416040:intron | 50.0% |
| GATGTTACTCACCGCTCTCT+CGG | + | tig0024313:27323-27342 | None:intergenic | 50.0% | |
| TAACATCGCCTTTGCCGAGT+TGG | - | tig0024313:27336-27355 | Msa1416040:intron | 50.0% | |
| ATTCTCTGCCAACTCGGCAA+AGG | + | tig0024313:27347-27366 | None:intergenic | 50.0% | |
| CCATTCTGCCAGACTAGAGA+TGG | + | tig0024313:27736-27755 | None:intergenic | 50.0% | |
| CCATCTCTAGTCTGGCAGAA+TGG | - | tig0024313:27733-27752 | Msa1416040:intron | 50.0% | |
| !! | GTCCAGGAGTAGGTTTTGAC+TGG | + | tig0024313:27841-27860 | None:intergenic | 50.0% |
| GTCAAAACCTACTCCTGGAC+GGG | - | tig0024313:27841-27860 | Msa1416040:intron | 50.0% | |
| TCAAAACCTACTCCTGGACG+GGG | - | tig0024313:27842-27861 | Msa1416040:intron | 50.0% | |
| TCTCATTTGCCTGTGGCTCA+GGG | + | tig0024313:27919-27938 | None:intergenic | 50.0% | |
| TTCTCATTTGCCTGTGGCTC+AGG | + | tig0024313:27920-27939 | None:intergenic | 50.0% | |
| GTGCAACTGAGCATCAGGAA+AGG | + | tig0024313:27960-27979 | None:intergenic | 50.0% | |
| TGTTCGTGCAACTGAGCATC+AGG | + | tig0024313:27965-27984 | None:intergenic | 50.0% | |
| TGCTCAGTTGCACGAACATG+CGG | - | tig0024313:27967-27986 | Msa1416040:intron | 50.0% | |
| ACTTAGCAGGGAGAAGAGCA+TGG | - | tig0024313:28350-28369 | Msa1416040:CDS | 50.0% | |
| GAAAGAGAGCGGACATAGGA+AGG | - | tig0024313:28379-28398 | Msa1416040:CDS | 50.0% | |
| TCTTGTACCATCTGGCATGC+GGG | + | tig0024313:28558-28577 | None:intergenic | 50.0% | |
| CTCTTGTACCATCTGGCATG+CGG | + | tig0024313:28559-28578 | None:intergenic | 50.0% | |
| ! | GAGGATTTTCAATGGGTCGG+GGG | - | tig0024313:28576-28595 | Msa1416040:CDS | 50.0% |
| GCATGAAAACACGTCAACGC+TGG | - | tig0024313:28645-28664 | Msa1416040:CDS | 50.0% | |
| !! | GATGGGCCTGTGTGGTTTTG+TGG | - | tig0024313:19208-19227 | Msa1416040:three_prime_UTR | 55.0% |
| ! | CGGTGGTTGGTTGCTTGAGT+CGG | + | tig0024313:19332-19351 | None:intergenic | 55.0% |
| CGACTCAAGCAACCAACCAC+CGG | - | tig0024313:19330-19349 | Msa1416040:three_prime_UTR | 55.0% | |
| ACGGCGAGATCACTACTTGG+GGG | + | tig0024313:19440-19459 | None:intergenic | 55.0% | |
| GACGGCGAGATCACTACTTG+GGG | + | tig0024313:19441-19460 | None:intergenic | 55.0% | |
| CTGACGGCGAGATCACTACT+TGG | + | tig0024313:19443-19462 | None:intergenic | 55.0% | |
| GGTACTAATAGGCGTGGGGT+GGG | + | tig0024313:19546-19565 | None:intergenic | 55.0% | |
| ! | TGATGATGTAGCGGAGGAGG+AGG | + | tig0024313:19576-19595 | None:intergenic | 55.0% |
| !! | TGATGATCTGGTGGTGGTGG+TGG | + | tig0024313:19612-19631 | None:intergenic | 55.0% |
| GGCTGCTCAACTTCTTGAGG+AGG | + | tig0024313:19687-19706 | None:intergenic | 55.0% | |
| ATCCTCCCTCGGAAAGAGAG+GGG | + | tig0024313:20124-20143 | None:intergenic | 55.0% | |
| ! | GTTGGGAGTGGCTGGTTATG+AGG | + | tig0024313:20310-20329 | None:intergenic | 55.0% |
| AAAGCGTGGAAACCGTCCCA+TGG | + | tig0024313:21537-21556 | Msa1416050:intron | 55.0% | |
| GTTTGTGAGGGGGATTTGGG+GGG | - | tig0024313:22159-22178 | Msa1416040:intron | 55.0% | |
| TTTGTGAGGGGGATTTGGGG+GGG | - | tig0024313:22160-22179 | Msa1416040:intron | 55.0% | |
| AAGCCCTCCCCCTCTAATAG+AGG | - | tig0024313:22343-22362 | Msa1416040:intron | 55.0% | |
| CACACCTCTATTAGAGGGGG+AGG | + | tig0024313:22350-22369 | Msa1416050:intron | 55.0% | |
| ! | ACTGGGTTGGAGGGATTGAG+TGG | + | tig0024313:22719-22738 | Msa1416050:intron | 55.0% |
| ! | TCCCTGTTTAGGACCCCCAT+TGG | - | tig0024313:22912-22931 | Msa1416040:intron | 55.0% |
| CTCCAATGGGGGTCCTAAAC+AGG | + | tig0024313:22917-22936 | Msa1416050:intron | 55.0% | |
| ! | CTGTTTAGGACCCCCATTGG+AGG | - | tig0024313:22915-22934 | Msa1416040:intron | 55.0% |
| !! | CCCAATGGGGGGTACCTAAT+AGG | - | tig0024313:23792-23811 | Msa1416040:intron | 55.0% |
| !! | GGGGGGTACCTAATAGGTAC+CGG | - | tig0024313:23798-23817 | Msa1416040:intron | 55.0% |
| !! | GGGGGTACCTAATAGGTACC+GGG | - | tig0024313:23799-23818 | Msa1416040:intron | 55.0% |
| GGCAGCTGTCTCACAAACCT+AGG | + | tig0024313:23895-23914 | None:intergenic | 55.0% | |
| CGTGGATCCCACAGATTGGA+AGG | - | tig0024313:24617-24636 | Msa1416040:intron | 55.0% | |
| CTCCCCTTCCTTCCAATCTG+TGG | + | tig0024313:24628-24647 | None:intergenic | 55.0% | |
| CACAGATTGGAAGGAAGGGG+AGG | - | tig0024313:24626-24645 | Msa1416040:intron | 55.0% | |
| GGAAGGGGAGGTGAGTCTAT+TGG | - | tig0024313:24638-24657 | Msa1416040:intron | 55.0% | |
| ACCAACAATGACCCAGTCGG+AGG | - | tig0024313:24662-24681 | Msa1416040:intron | 55.0% | |
| ACCTCCGACTGGGTCATTGT+TGG | + | tig0024313:24666-24685 | None:intergenic | 55.0% | |
| GTGTTAGATAGGCGCGGCTA+GGG | - | tig0024313:24775-24794 | Msa1416040:intron | 55.0% | |
| ! | ATAGGCGCGGCTAGGGTTTT+GGG | - | tig0024313:24782-24801 | Msa1416040:intron | 55.0% |
| ! | ACTAGGGTTTGCGTTGACGG+TGG | - | tig0024313:24856-24875 | Msa1416040:intron | 55.0% |
| !! | TTGGGTTGGCCTGGTGGTAT+TGG | - | tig0024313:25839-25858 | Msa1416040:intron | 55.0% |
| !! | TTGGCCTGGTGGTATTGGCT+TGG | - | tig0024313:25844-25863 | Msa1416040:intron | 55.0% |
| !! | TGGCCTGGTGGTATTGGCTT+GGG | - | tig0024313:25845-25864 | Msa1416040:intron | 55.0% |
| AAAGTTGGACCCACTAGCGG+AGG | - | tig0024313:26092-26111 | Msa1416040:intron | 55.0% | |
| CTTGTGACTCCTCCGCTAGT+GGG | + | tig0024313:26104-26123 | None:intergenic | 55.0% | |
| CCCAACAAGGCAATGGCTGA+AGG | - | tig0024313:26149-26168 | Msa1416040:intron | 55.0% | |
| GCCTTCAGCCATTGCCTTGT+TGG | + | tig0024313:26153-26172 | None:intergenic | 55.0% | |
| !! | CTTGCTATTTGGGCCCGGTT+TGG | + | tig0024313:26324-26343 | None:intergenic | 55.0% |
| AACCGGGCCCAAATAGCAAG+AGG | - | tig0024313:26324-26343 | Msa1416040:intron | 55.0% | |
| !! | CTCCTCTTGCTATTTGGGCC+CGG | + | tig0024313:26329-26348 | None:intergenic | 55.0% |
| AATTCTCCGGCAGCAACCAG+CGG | - | tig0024313:26484-26503 | Msa1416040:intron | 55.0% | |
| ! | GCTGTAAAAGAGCACAGCCG+AGG | - | tig0024313:26534-26553 | Msa1416040:intron | 55.0% |
| AGCCGAGGAGAGAAAACGAC+AGG | - | tig0024313:26549-26568 | Msa1416040:intron | 55.0% | |
| TACTTCTGTCCCTGAGCCAC+AGG | - | tig0024313:27907-27926 | Msa1416040:intron | 55.0% | |
| AGAGCGGACATAGGAAGGGA+GGG | - | tig0024313:28384-28403 | Msa1416040:CDS | 55.0% | |
| CTTGTACCATCTGGCATGCG+GGG | + | tig0024313:28557-28576 | None:intergenic | 55.0% | |
| CGCATGCCAGATGGTACAAG+AGG | - | tig0024313:28557-28576 | Msa1416040:CDS | 55.0% | |
| !! | GTGGAAGTGATGGGCCTGTG+TGG | - | tig0024313:19200-19219 | Msa1416040:three_prime_UTR | 60.0% |
| !!! | GCCTGTGTGGTTTTGTGGGC+CGG | - | tig0024313:19213-19232 | Msa1416040:three_prime_UTR | 60.0% |
| !!! | CCTGTGTGGTTTTGTGGGCC+GGG | - | tig0024313:19214-19233 | Msa1416040:three_prime_UTR | 60.0% |
| CGGCGAGATCACTACTTGGG+GGG | + | tig0024313:19439-19458 | None:intergenic | 60.0% | |
| CGGTACTAATAGGCGTGGGG+TGG | + | tig0024313:19547-19566 | None:intergenic | 60.0% | |
| CGGCGGTACTAATAGGCGTG+GGG | + | tig0024313:19550-19569 | None:intergenic | 60.0% | |
| GCGGCGGTACTAATAGGCGT+GGG | + | tig0024313:19551-19570 | None:intergenic | 60.0% | |
| GAGGAGGCGGCGGTACTAAT+AGG | + | tig0024313:19557-19576 | None:intergenic | 60.0% | |
| ! | TGATGTAGCGGAGGAGGAGG+AGG | + | tig0024313:19573-19592 | None:intergenic | 60.0% |
| TGCACCCCCTCTCTTTCCGA+GGG | - | tig0024313:20116-20135 | Msa1416040:intron | 60.0% | |
| TCCTCCCTCGGAAAGAGAGG+GGG | + | tig0024313:20123-20142 | None:intergenic | 60.0% | |
| TTGTGAGGGGGATTTGGGGG+GGG | - | tig0024313:22161-22180 | Msa1416040:intron | 60.0% | |
| TGGGGGTCCTAAACAGGGAG+TGG | + | tig0024313:22911-22930 | Msa1416050:intron | 60.0% | |
| CAATGACCCAGTCGGAGGTC+TGG | - | tig0024313:24667-24686 | Msa1416040:intron | 60.0% | |
| CATCCTCCAGACCTCCGACT+GGG | + | tig0024313:24676-24695 | None:intergenic | 60.0% | |
| GAGGTCTGGAGGATGGCATG+TGG | - | tig0024313:24681-24700 | Msa1416040:intron | 60.0% | |
| CGTGTTAGATAGGCGCGGCT+AGG | - | tig0024313:24774-24793 | Msa1416040:intron | 60.0% | |
| ! | GATAGGCGCGGCTAGGGTTT+TGG | - | tig0024313:24781-24800 | Msa1416040:intron | 60.0% |
| !! | CTAACCCACTTGGGTTGGCC+TGG | - | tig0024313:25830-25849 | Msa1416040:intron | 60.0% |
| ACCACCAGGCCAACCCAAGT+GGG | + | tig0024313:25837-25856 | None:intergenic | 60.0% | |
| TACCACCAGGCCAACCCAAG+TGG | + | tig0024313:25838-25857 | None:intergenic | 60.0% | |
| ! | TGGGAGTGTGCTCCTCCTTG+AGG | - | tig0024313:25871-25890 | Msa1416040:intron | 60.0% |
| GCTTGTGACTCCTCCGCTAG+TGG | + | tig0024313:26105-26124 | None:intergenic | 60.0% | |
| ! | CATTGCCTTGTTGGGGGCGT+CGG | + | tig0024313:26144-26163 | None:intergenic | 60.0% |
| CAGCGGCTGTTGACAACGTG+CGG | - | tig0024313:26394-26413 | Msa1416040:intron | 60.0% | |
| AGCGGCTGTTGACAACGTGC+GGG | - | tig0024313:26395-26414 | Msa1416040:intron | 60.0% | |
| ATGGGGTGAGCTGTTGGTGC+TGG | - | tig0024313:26459-26478 | Msa1416040:intron | 60.0% | |
| ! | CTTTTATCGTCCACCGCCGC+TGG | + | tig0024313:26503-26522 | None:intergenic | 60.0% |
| TGTTGAGCTGGCCGAGAGAG+CGG | - | tig0024313:27309-27328 | Msa1416040:CDS | 60.0% | |
| AACCTACTCCTGGACGGGGA+AGG | - | tig0024313:27846-27865 | Msa1416040:intron | 60.0% | |
| TTCCTTCCCCGTCCAGGAGT+AGG | + | tig0024313:27851-27870 | None:intergenic | 60.0% | |
| TACTCCTGGACGGGGAAGGA+AGG | - | tig0024313:27850-27869 | Msa1416040:intron | 60.0% | |
| ACTCCTGGACGGGGAAGGAA+GGG | - | tig0024313:27851-27870 | Msa1416040:intron | 60.0% | |
| GAGAGCGGACATAGGAAGGG+AGG | - | tig0024313:28383-28402 | Msa1416040:CDS | 60.0% | |
| ! | ATAGGAAGGGAGGGCGTGGT+CGG | - | tig0024313:28393-28412 | Msa1416040:CDS | 60.0% |
| TGCTGCCAAGCAACCTCCTC+CGG | - | tig0024313:28529-28548 | Msa1416040:CDS | 60.0% | |
| CCCGGCCCACAAAACCACAC+AGG | + | tig0024313:19217-19236 | None:intergenic | 65.0% | |
| CGTGGGGTGGGCACAAACTC+TGG | + | tig0024313:19534-19553 | None:intergenic | 65.0% | |
| GGCGGCGGTACTAATAGGCG+TGG | + | tig0024313:19552-19571 | None:intergenic | 65.0% | |
| ! | TGTAGCGGAGGAGGAGGAGG+CGG | + | tig0024313:19570-19589 | None:intergenic | 65.0% |
| CTGCACCCCCTCTCTTTCCG+AGG | - | tig0024313:20115-20134 | Msa1416040:intron | 65.0% | |
| ACCCCCTCTCTTTCCGAGGG+AGG | - | tig0024313:20119-20138 | Msa1416040:intron | 65.0% | |
| TGTGAGGGGGATTTGGGGGG+GGG | - | tig0024313:22162-22181 | Msa1416040:intron | 65.0% | |
| TGACCCAGTCGGAGGTCTGG+AGG | - | tig0024313:24670-24689 | Msa1416040:intron | 65.0% | |
| CCATCCTCCAGACCTCCGAC+TGG | + | tig0024313:24677-24696 | None:intergenic | 65.0% | |
| CCAGTCGGAGGTCTGGAGGA+TGG | - | tig0024313:24674-24693 | Msa1416040:intron | 65.0% | |
| !! | ACCCACTTGGGTTGGCCTGG+TGG | - | tig0024313:25833-25852 | Msa1416040:intron | 65.0% |
| !! | TGGTACCGACGCCCCCAACA+AGG | - | tig0024313:26136-26155 | Msa1416040:intron | 65.0% |
| CGACGCCCCCAACAAGGCAA+TGG | - | tig0024313:26142-26161 | Msa1416040:intron | 65.0% | |
| GATGAGGGGAACTGGCGGAG+CGG | - | tig0024313:27453-27472 | Msa1416040:intron | 65.0% | |
| AGACCCTTCCTTCCCCGTCC+AGG | + | tig0024313:27857-27876 | None:intergenic | 65.0% | |
| GGACATAGGAAGGGAGGGCG+TGG | - | tig0024313:28389-28408 | Msa1416040:CDS | 65.0% | |
| ! | TAGGAAGGGAGGGCGTGGTC+GGG | - | tig0024313:28394-28413 | Msa1416040:CDS | 65.0% |
| GCTGCCAAGCAACCTCCTCC+GGG | - | tig0024313:28530-28549 | Msa1416040:CDS | 65.0% | |
| CTGCCAAGCAACCTCCTCCG+GGG | - | tig0024313:28531-28550 | Msa1416040:CDS | 65.0% | |
| ! | CCAGGATTGACGGACGCGCC+CGG | + | tig0024313:19235-19254 | None:intergenic | 70.0% |
| GTGAGGGGGATTTGGGGGGG+GGG | - | tig0024313:22163-22182 | Msa1416040:intron | 70.0% | |
| TGAGGGGGATTTGGGGGGGG+GGG | - | tig0024313:22164-22183 | Msa1416040:intron | 70.0% | |
| GGGGGGGGGGTTGGAGGATT+AGG | - | tig0024313:22189-22208 | Msa1416040:intron | 70.0% | |
| TCTCCGGCAGCAACCAGCGG+CGG | - | tig0024313:26487-26506 | Msa1416040:intron | 70.0% | |
| ! | AGATTGGGGCGGCTTGGGGC+TGG | - | tig0024313:26912-26931 | Msa1416040:intron | 70.0% |
| ! | GGGCGGCTTGGGGCTGGTAA+TGG | - | tig0024313:26918-26937 | Msa1416040:intron | 70.0% |
| ! | GGAACTGGCGGAGCGGACTC+CGG | - | tig0024313:27460-27479 | Msa1416040:intron | 70.0% |
| ! | GAACTGGCGGAGCGGACTCC+GGG | - | tig0024313:27461-27480 | Msa1416040:intron | 70.0% |
| ! | AGGAAGGGAGGGCGTGGTCG+GGG | - | tig0024313:28395-28414 | Msa1416040:CDS | 70.0% |
| !! | CGGGGGCGGACTAAGAGACG+TGG | - | tig0024313:28413-28432 | Msa1416040:CDS | 70.0% |
| CCGGGCGCGTCCGTCAATCC+TGG | - | tig0024313:19232-19251 | Msa1416040:three_prime_UTR | 75.0% | |
| AGCGGAGGAGGAGGAGGCGG+CGG | + | tig0024313:19567-19586 | None:intergenic | 75.0% | |
| GAGGGGGATTTGGGGGGGGG+GGG | - | tig0024313:22165-22184 | Msa1416040:intron | 75.0% | |
| AGGGGGATTTGGGGGGGGGG+GGG | - | tig0024313:22166-22185 | Msa1416040:intron | 75.0% | |
| ! | CCACCGCCGCTGGTTGCTGC+CGG | + | tig0024313:26493-26512 | None:intergenic | 75.0% |
| ! | GGAAGGGAGGGCGTGGTCGG+GGG | - | tig0024313:28396-28415 | Msa1416040:CDS | 75.0% |
| GGGCCCCGGAGGAGGTTGCT+TGG | + | tig0024313:28537-28556 | None:intergenic | 75.0% | |
| CCATCTGGCATGCGGGGCCC+CGG | + | tig0024313:28551-28570 | None:intergenic | 75.0% | |
| ! | GGGGGATTTGGGGGGGGGGG+GGG | - | tig0024313:22167-22186 | Msa1416040:intron | 80.0% |
| ! | GGGGATTTGGGGGGGGGGGG+GGG | - | tig0024313:22168-22187 | Msa1416040:intron | 80.0% |
| ! | GGGATTTGGGGGGGGGGGGG+GGG | - | tig0024313:22169-22188 | Msa1416040:intron | 80.0% |
| ! | GGATTTGGGGGGGGGGGGGG+GGG | - | tig0024313:22170-22189 | Msa1416040:intron | 80.0% |
| ! | GATTTGGGGGGGGGGGGGGG+GGG | - | tig0024313:22171-22190 | Msa1416040:intron | 80.0% |
| ! | ATTTGGGGGGGGGGGGGGGG+GGG | - | tig0024313:22172-22191 | Msa1416040:intron | 80.0% |
| ! | CCGGCAGCAACCAGCGGCGG+TGG | - | tig0024313:26490-26509 | Msa1416040:intron | 80.0% |
| !! | AGGGAGGGCGTGGTCGGGGG+CGG | - | tig0024313:28399-28418 | Msa1416040:CDS | 80.0% |
| ! | TCTGGCATGCGGGGCCCCGG+AGG | + | tig0024313:28548-28567 | None:intergenic | 80.0% |
| ! | CCGGGGCCCCGCATGCCAGA+TGG | - | tig0024313:28548-28567 | Msa1416040:CDS | 80.0% |
| ! | TTTGGGGGGGGGGGGGGGGG+GGG | - | tig0024313:22173-22192 | Msa1416040:intron | 85.0% |
| ! | GGCATGCGGGGCCCCGGAGG+AGG | + | tig0024313:28545-28564 | None:intergenic | 85.0% |
| ! | TTGGGGGGGGGGGGGGGGGG+GGG | - | tig0024313:22174-22193 | Msa1416040:intron | 90.0% |
| ! | GGGGGGGGGGGGGGGGTTGG+AGG | - | tig0024313:22183-22202 | Msa1416040:intron | 90.0% |
| ! | TGGGGGGGGGGGGGGGGGGG+GGG | - | tig0024313:22175-22194 | Msa1416040:intron | 95.0% |
| ! | GGGGGGGGGGGGGGGGGGGT+TGG | - | tig0024313:22180-22199 | Msa1416040:intron | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024313 | gene | 19184 | 28928 | 19184 | ID=Msa1416040;Name=Msa1416040 |
| tig0024313 | mRNA | 19184 | 28928 | 19184 | ID=Msa1416040-mRNA-1;Parent=Msa1416040;Name=Msa1416040-mRNA-1;_AED=0.24;_eAED=0.24;_QI=221|1|1|1|1|1|10|303|443 |
| tig0024313 | exon | 19184 | 19753 | 19184 | ID=Msa1416040-mRNA-1:exon:22754;Parent=Msa1416040-mRNA-1 |
| tig0024313 | exon | 20124 | 20270 | 20124 | ID=Msa1416040-mRNA-1:exon:22753;Parent=Msa1416040-mRNA-1 |
| tig0024313 | exon | 20606 | 20674 | 20606 | ID=Msa1416040-mRNA-1:exon:22752;Parent=Msa1416040-mRNA-1 |
| tig0024313 | exon | 20782 | 20829 | 20782 | ID=Msa1416040-mRNA-1:exon:22751;Parent=Msa1416040-mRNA-1 |
| tig0024313 | exon | 26750 | 26849 | 26750 | ID=Msa1416040-mRNA-1:exon:22750;Parent=Msa1416040-mRNA-1 |
| tig0024313 | exon | 27262 | 27341 | 27262 | ID=Msa1416040-mRNA-1:exon:22749;Parent=Msa1416040-mRNA-1 |
| tig0024313 | exon | 27551 | 27622 | 27551 | ID=Msa1416040-mRNA-1:exon:22748;Parent=Msa1416040-mRNA-1 |
| tig0024313 | exon | 27751 | 27845 | 27751 | ID=Msa1416040-mRNA-1:exon:22747;Parent=Msa1416040-mRNA-1 |
| tig0024313 | exon | 28096 | 28177 | 28096 | ID=Msa1416040-mRNA-1:exon:22746;Parent=Msa1416040-mRNA-1 |
| tig0024313 | exon | 28336 | 28928 | 28336 | ID=Msa1416040-mRNA-1:exon:22745;Parent=Msa1416040-mRNA-1 |
| tig0024313 | five_prime_UTR | 28708 | 28928 | 28708 | ID=Msa1416040-mRNA-1:five_prime_utr;Parent=Msa1416040-mRNA-1 |
| tig0024313 | CDS | 28336 | 28707 | 28336 | ID=Msa1416040-mRNA-1:cds;Parent=Msa1416040-mRNA-1 |
| tig0024313 | CDS | 28096 | 28177 | 28096 | ID=Msa1416040-mRNA-1:cds;Parent=Msa1416040-mRNA-1 |
| tig0024313 | CDS | 27751 | 27845 | 27751 | ID=Msa1416040-mRNA-1:cds;Parent=Msa1416040-mRNA-1 |
| tig0024313 | CDS | 27551 | 27622 | 27551 | ID=Msa1416040-mRNA-1:cds;Parent=Msa1416040-mRNA-1 |
| tig0024313 | CDS | 27262 | 27341 | 27262 | ID=Msa1416040-mRNA-1:cds;Parent=Msa1416040-mRNA-1 |
| tig0024313 | CDS | 26750 | 26849 | 26750 | ID=Msa1416040-mRNA-1:cds;Parent=Msa1416040-mRNA-1 |
| tig0024313 | CDS | 20782 | 20829 | 20782 | ID=Msa1416040-mRNA-1:cds;Parent=Msa1416040-mRNA-1 |
| tig0024313 | CDS | 20606 | 20674 | 20606 | ID=Msa1416040-mRNA-1:cds;Parent=Msa1416040-mRNA-1 |
| tig0024313 | CDS | 20124 | 20270 | 20124 | ID=Msa1416040-mRNA-1:cds;Parent=Msa1416040-mRNA-1 |
| tig0024313 | CDS | 19487 | 19753 | 19487 | ID=Msa1416040-mRNA-1:cds;Parent=Msa1416040-mRNA-1 |
| tig0024313 | three_prime_UTR | 19184 | 19486 | 19184 | ID=Msa1416040-mRNA-1:three_prime_utr;Parent=Msa1416040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
