Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0800770 | XP_003612367.1 | 95.662 | 853 | 29 | 3 | 1 | 852 | 1 | 846 | 0.0 | 1661 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0800770 | G7K186 | 95.662 | 853 | 29 | 3 | 1 | 852 | 1 | 846 | 0.0 | 1661 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007990 | Msa0800770 | 0.801487 | 8.798168e-49 | -8.615850e-47 |
| Msa0015670 | Msa0800770 | 0.805924 | 1.055367e-49 | -8.615850e-47 |
| Msa0036140 | Msa0800770 | 0.807065 | 6.063153e-50 | -8.615850e-47 |
| Msa0040620 | Msa0800770 | 0.804979 | 1.665462e-49 | -8.615850e-47 |
| Msa0042550 | Msa0800770 | 0.846495 | 2.096105e-59 | -8.615850e-47 |
| Msa0045550 | Msa0800770 | 0.815735 | 7.937663e-52 | -8.615850e-47 |
| Msa0045910 | Msa0800770 | 0.813131 | 2.989901e-51 | -8.615850e-47 |
| Msa0055070 | Msa0800770 | 0.853769 | 1.920082e-61 | -8.615850e-47 |
| Msa0064110 | Msa0800770 | 0.812919 | 3.326983e-51 | -8.615850e-47 |
| Msa0075880 | Msa0800770 | 0.800870 | 1.176818e-48 | -8.615850e-47 |
| Msa0077450 | Msa0800770 | 0.843112 | 1.711543e-58 | -8.615850e-47 |
| Msa0092410 | Msa0800770 | 0.816098 | 6.588051e-52 | -8.615850e-47 |
| Msa0101020 | Msa0800770 | 0.852400 | 4.734283e-61 | -8.615850e-47 |
| Msa0608200 | Msa0800770 | 0.807758 | 4.323046e-50 | -8.615850e-47 |
| Msa0613440 | Msa0800770 | 0.800004 | 1.765824e-48 | -8.615850e-47 |
| Msa0613460 | Msa0800770 | 0.831118 | 2.001262e-55 | -8.615850e-47 |
| Msa0615010 | Msa0800770 | 0.817715 | 2.856360e-52 | -8.615850e-47 |
| Msa0620910 | Msa0800770 | 0.802771 | 4.788550e-49 | -8.615850e-47 |
| Msa0631330 | Msa0800770 | 0.806656 | 7.398755e-50 | -8.615850e-47 |
| Msa0648520 | Msa0800770 | 0.843816 | 1.110066e-58 | -8.615850e-47 |
| Msa0651270 | Msa0800770 | 0.800285 | 1.548287e-48 | -8.615850e-47 |
| Msa0654010 | Msa0800770 | 0.827349 | 1.642966e-54 | -8.615850e-47 |
| Msa0659510 | Msa0800770 | 0.803154 | 3.990604e-49 | -8.615850e-47 |
| Msa0662570 | Msa0800770 | 0.812841 | 3.459799e-51 | -8.615850e-47 |
| Msa0688150 | Msa0800770 | 0.802263 | 6.095969e-49 | -8.615850e-47 |
| Msa0691050 | Msa0800770 | 0.869902 | 2.185132e-66 | -8.615850e-47 |
| Msa0693380 | Msa0800770 | 0.825790 | 3.868722e-54 | -8.615850e-47 |
| Msa0695870 | Msa0800770 | 0.817821 | 2.703371e-52 | -8.615850e-47 |
| Msa0709160 | Msa0800770 | 0.820593 | 6.318223e-53 | -8.615850e-47 |
| Msa0717020 | Msa0800770 | 0.819622 | 1.054382e-52 | -8.615850e-47 |
| Msa0718070 | Msa0800770 | 0.875692 | 2.521141e-68 | -8.615850e-47 |
| Msa0721340 | Msa0800770 | 0.825423 | 4.725830e-54 | -8.615850e-47 |
| Msa0731940 | Msa0800770 | 0.802533 | 5.363959e-49 | -8.615850e-47 |
| Msa0732840 | Msa0800770 | 0.841891 | 3.608498e-58 | -8.615850e-47 |
| Msa0735160 | Msa0800770 | 0.800936 | 1.140843e-48 | -8.615850e-47 |
| Msa0744040 | Msa0800770 | 0.807418 | 5.105313e-50 | -8.615850e-47 |
| Msa0747650 | Msa0800770 | 0.811830 | 5.754312e-51 | -8.615850e-47 |
| Msa0750250 | Msa0800770 | 0.803988 | 2.680203e-49 | -8.615850e-47 |
| Msa0751260 | Msa0800770 | 0.806799 | 6.902072e-50 | -8.615850e-47 |
| Msa0766360 | Msa0800770 | 0.812967 | 3.247446e-51 | -8.615850e-47 |
| Msa0773310 | Msa0800770 | 0.827530 | 1.486600e-54 | -8.615850e-47 |
| Msa0773590 | Msa0800770 | 0.803936 | 2.748329e-49 | -8.615850e-47 |
| Msa0794700 | Msa0800770 | 0.806975 | 6.336095e-50 | -8.615850e-47 |
| Msa0795070 | Msa0800770 | 0.835574 | 1.549929e-56 | -8.615850e-47 |
| Msa0800770 | Msa0810220 | 0.808897 | 2.471431e-50 | -8.615850e-47 |
| Msa0800770 | Msa0810760 | 0.829037 | 6.441180e-55 | -8.615850e-47 |
| Msa0800770 | Msa0816710 | 0.808561 | 2.915260e-50 | -8.615850e-47 |
| Msa0800770 | Msa0817110 | 0.807996 | 3.846366e-50 | -8.615850e-47 |
| Msa0800770 | Msa0830510 | 0.810608 | 1.059014e-50 | -8.615850e-47 |
| Msa0800770 | Msa0831850 | 0.815927 | 7.194471e-52 | -8.615850e-47 |
| Msa0800770 | Msa0838930 | 0.990954 | 3.752059e-185 | -8.615850e-47 |
| Msa0800770 | Msa0839000 | 0.874454 | 6.671828e-68 | -8.615850e-47 |
| Msa0800770 | Msa0847880 | 0.806744 | 7.090345e-50 | -8.615850e-47 |
| Msa0800770 | Msa0870060 | 0.802990 | 4.315530e-49 | -8.615850e-47 |
| Msa0800770 | Msa0870530 | 0.827161 | 1.822480e-54 | -8.615850e-47 |
| Msa0800770 | Msa0873860 | 0.817705 | 2.870793e-52 | -8.615850e-47 |
| Msa0800770 | Msa0874630 | 0.842944 | 1.897820e-58 | -8.615850e-47 |
| Msa0800770 | Msa0900620 | 0.811327 | 7.399939e-51 | -8.615850e-47 |
| Msa0800770 | Msa0902710 | 0.813934 | 1.990361e-51 | -8.615850e-47 |
| Msa0800770 | Msa0902830 | 0.813155 | 2.953971e-51 | -8.615850e-47 |
| Msa0800770 | Msa0903700 | 0.807709 | 4.427587e-50 | -8.615850e-47 |
| Msa0800770 | Msa0913480 | -0.806731 | 7.132954e-50 | -8.615850e-47 |
| Msa0800770 | Msa0923010 | 0.801265 | 9.770962e-49 | -8.615850e-47 |
| Msa0800770 | Msa0926890 | 0.813534 | 2.438413e-51 | -8.615850e-47 |
| Msa0800770 | Msa0930910 | -0.821034 | 5.003922e-53 | -8.615850e-47 |
| Msa0800770 | Msa0936210 | 0.813046 | 3.119816e-51 | -8.615850e-47 |
| Msa0800770 | Msa0969520 | 0.804411 | 2.187936e-49 | -8.615850e-47 |
| Msa0800770 | Msa0973600 | 0.830094 | 3.563609e-55 | -8.615850e-47 |
| Msa0800770 | Msa0976290 | 0.802899 | 4.507115e-49 | -8.615850e-47 |
| Msa0800770 | Msa0981040 | 0.811710 | 6.109100e-51 | -8.615850e-47 |
| Msa0800770 | Msa0982240 | 0.805432 | 1.339030e-49 | -8.615850e-47 |
| Msa0800770 | Msa0990960 | 0.801806 | 7.566212e-49 | -8.615850e-47 |
| Msa0800770 | Msa1008750 | 0.845690 | 3.469276e-59 | -8.615850e-47 |
| Msa0800770 | Msa1009390 | 0.800866 | 1.178632e-48 | -8.615850e-47 |
| Msa0800770 | Msa1014010 | 0.812049 | 5.155306e-51 | -8.615850e-47 |
| Msa0800770 | Msa1022820 | 0.813342 | 2.687633e-51 | -8.615850e-47 |
| Msa0800770 | Msa1031770 | 0.800819 | 1.204882e-48 | -8.615850e-47 |
| Msa0800770 | Msa1033780 | 0.806872 | 6.659782e-50 | -8.615850e-47 |
| Msa0800770 | Msa1035300 | 0.823123 | 1.640942e-53 | -8.615850e-47 |
| Msa0800770 | Msa1043420 | 0.806744 | 7.090793e-50 | -8.615850e-47 |
| Msa0800770 | Msa1043480 | 0.811176 | 7.981075e-51 | -8.615850e-47 |
| Msa0800770 | Msa1050740 | 0.825302 | 5.046936e-54 | -8.615850e-47 |
| Msa0800770 | Msa1068200 | -0.805687 | 1.183452e-49 | -8.615850e-47 |
| Msa0800770 | Msa1070840 | 0.835555 | 1.567081e-56 | -8.615850e-47 |
| Msa0800770 | Msa1075390 | 0.831344 | 1.760401e-55 | -8.615850e-47 |
| Msa0800770 | Msa1076700 | 0.805254 | 1.458817e-49 | -8.615850e-47 |
| Msa0800770 | Msa1080960 | 0.839897 | 1.203773e-57 | -8.615850e-47 |
| Msa0800770 | Msa1084260 | 0.845300 | 4.425246e-59 | -8.615850e-47 |
| Msa0800770 | Msa1093480 | 0.839398 | 1.622819e-57 | -8.615850e-47 |
| Msa0800770 | Msa1096060 | 0.838777 | 2.350460e-57 | -8.615850e-47 |
| Msa0800770 | Msa1098250 | 0.811741 | 6.016157e-51 | -8.615850e-47 |
| Msa0800770 | Msa1098270 | 0.829981 | 3.797173e-55 | -8.615850e-47 |
| Msa0800770 | Msa1098290 | 0.807359 | 5.254549e-50 | -8.615850e-47 |
| Msa0800770 | Msa1115280 | 0.809033 | 2.311302e-50 | -8.615850e-47 |
| Msa0800770 | Msa1116450 | 0.854089 | 1.552035e-61 | -8.615850e-47 |
| Msa0800770 | Msa1118760 | 0.859372 | 4.329423e-63 | -8.615850e-47 |
| Msa0800770 | Msa1138280 | 0.823172 | 1.598318e-53 | -8.615850e-47 |
| Msa0800770 | Msa1138320 | 0.812559 | 3.989285e-51 | -8.615850e-47 |
| Msa0800770 | Msa1139890 | 0.819908 | 9.071780e-53 | -8.615850e-47 |
| Msa0800770 | Msa1143020 | 0.848326 | 6.580503e-60 | -8.615850e-47 |
| Msa0800770 | Msa1158310 | 0.805237 | 1.470629e-49 | -8.615850e-47 |
| Msa0800770 | Msa1158660 | 0.845080 | 5.077043e-59 | -8.615850e-47 |
| Msa0800770 | Msa1162060 | 0.805399 | 1.360363e-49 | -8.615850e-47 |
| Msa0800770 | Msa1186950 | -0.820213 | 7.725538e-53 | -8.615850e-47 |
| Msa0800770 | Msa1205390 | 0.817672 | 2.920036e-52 | -8.615850e-47 |
| Msa0800770 | Msa1225200 | 0.815026 | 1.141290e-51 | -8.615850e-47 |
| Msa0800770 | Msa1239720 | 0.807262 | 5.509224e-50 | -8.615850e-47 |
| Msa0800770 | Msa1255060 | 0.811370 | 7.243237e-51 | -8.615850e-47 |
| Msa0800770 | Msa1279420 | 0.810958 | 8.895658e-51 | -8.615850e-47 |
| Msa0800770 | Msa1282580 | -0.818039 | 2.413424e-52 | -8.615850e-47 |
| Msa0800770 | Msa1286550 | 0.805729 | 1.159908e-49 | -8.615850e-47 |
| Msa0800770 | Msa1288450 | 0.842620 | 2.314004e-58 | -8.615850e-47 |
| Msa0800770 | Msa1295510 | 0.805784 | 1.129234e-49 | -8.615850e-47 |
| Msa0800770 | Msa1297310 | 0.831958 | 1.242238e-55 | -8.615850e-47 |
| Msa0800770 | Msa1307210 | 0.808805 | 2.585537e-50 | -8.615850e-47 |
| Msa0800770 | Msa1319820 | 0.805032 | 1.623816e-49 | -8.615850e-47 |
| Msa0800770 | Msa1332050 | 0.802204 | 6.268914e-49 | -8.615850e-47 |
| Msa0800770 | Msa1343250 | 0.804975 | 1.668843e-49 | -8.615850e-47 |
| Msa0800770 | Msa1348880 | 0.800274 | 1.556318e-48 | -8.615850e-47 |
| Msa0800770 | Msa1352540 | -0.805589 | 1.240996e-49 | -8.615850e-47 |
| Msa0800770 | Msa1359580 | 0.818443 | 1.954928e-52 | -8.615850e-47 |
| Msa0800770 | Msa1366300 | 0.826189 | 3.109889e-54 | -8.615850e-47 |
| Msa0800770 | Msa1368430 | 0.815795 | 7.699137e-52 | -8.615850e-47 |
| Msa0800770 | Msa1372150 | 0.839424 | 1.598244e-57 | -8.615850e-47 |
| Msa0800770 | Msa1376890 | 0.801238 | 9.896394e-49 | -8.615850e-47 |
| Msa0800770 | Msa1378940 | 0.814984 | 1.166337e-51 | -8.615850e-47 |
| Msa0800770 | Msa1379850 | 0.884932 | 1.256889e-71 | -8.615850e-47 |
| Msa0800770 | Msa1382680 | 0.819493 | 1.128042e-52 | -8.615850e-47 |
| Msa0800770 | Msa1383230 | 0.804305 | 2.302806e-49 | -8.615850e-47 |
| Msa0800770 | Msa1385020 | 0.829669 | 4.523870e-55 | -8.615850e-47 |
| Msa0800770 | Msa1393410 | 0.800382 | 1.479300e-48 | -8.615850e-47 |
| Msa0800770 | Msa1398890 | 0.813225 | 2.851358e-51 | -8.615850e-47 |
| Msa0800770 | Msa1401270 | 0.825052 | 5.785425e-54 | -8.615850e-47 |
| Msa0800770 | Msa1403650 | 0.811505 | 6.771172e-51 | -8.615850e-47 |
| Msa0800770 | Msa1408180 | 0.808417 | 3.129955e-50 | -8.615850e-47 |
| Msa0800770 | Msa1408620 | -0.817313 | 3.517680e-52 | -8.615850e-47 |
| Msa0800770 | Msa1416040 | -0.806740 | 7.102431e-50 | -8.615850e-47 |
| Msa0800770 | Msa1424630 | 0.809642 | 1.710638e-50 | -8.615850e-47 |
| Msa0800770 | Msa1430550 | 0.811861 | 5.664195e-51 | -8.615850e-47 |
| Msa0800770 | Msa1433220 | 0.833049 | 6.665628e-56 | -8.615850e-47 |
| Msa0800770 | Msa1435420 | 0.801773 | 7.686318e-49 | -8.615850e-47 |
| Msa0800770 | Msa1440740 | 0.831531 | 1.583110e-55 | -8.615850e-47 |
| Msa0800770 | Msa1447150 | 0.800537 | 1.375607e-48 | -8.615850e-47 |
| Msa0800770 | Msa1448980 | 0.809282 | 2.043730e-50 | -8.615850e-47 |
| Msa0138500 | Msa0800770 | 0.801306 | 9.580226e-49 | -8.615850e-47 |
| Msa0142460 | Msa0800770 | 0.820367 | 7.120406e-53 | -8.615850e-47 |
| Msa0145110 | Msa0800770 | 0.832193 | 1.087176e-55 | -8.615850e-47 |
| Msa0169820 | Msa0800770 | 0.803563 | 3.284806e-49 | -8.615850e-47 |
| Msa0170140 | Msa0800770 | 0.838576 | 2.649840e-57 | -8.615850e-47 |
| Msa0173390 | Msa0800770 | 0.805223 | 1.481118e-49 | -8.615850e-47 |
| Msa0178510 | Msa0800770 | 0.842648 | 2.274691e-58 | -8.615850e-47 |
| Msa0187030 | Msa0800770 | 0.835480 | 1.637582e-56 | -8.615850e-47 |
| Msa0187830 | Msa0800770 | 0.822349 | 2.484669e-53 | -8.615850e-47 |
| Msa0188050 | Msa0800770 | 0.800141 | 1.656108e-48 | -8.615850e-47 |
| Msa0190530 | Msa0800770 | 0.813525 | 2.449102e-51 | -8.615850e-47 |
| Msa0191890 | Msa0800770 | 0.825583 | 4.331026e-54 | -8.615850e-47 |
| Msa0193540 | Msa0800770 | 0.855043 | 8.218925e-62 | -8.615850e-47 |
| Msa0200560 | Msa0800770 | 0.800709 | 1.269300e-48 | -8.615850e-47 |
| Msa0204840 | Msa0800770 | 0.825491 | 4.553793e-54 | -8.615850e-47 |
| Msa0210450 | Msa0800770 | 0.812825 | 3.488485e-51 | -8.615850e-47 |
| Msa0220290 | Msa0800770 | -0.811015 | 8.648855e-51 | -8.615850e-47 |
| Msa0225220 | Msa0800770 | 0.801575 | 8.439879e-49 | -8.615850e-47 |
| Msa0226180 | Msa0800770 | 0.804869 | 1.756398e-49 | -8.615850e-47 |
| Msa0235470 | Msa0800770 | 0.802776 | 4.777280e-49 | -8.615850e-47 |
| Msa0376590 | Msa0800770 | 0.842686 | 2.222681e-58 | -8.615850e-47 |
| Msa0379710 | Msa0800770 | 0.812721 | 3.675813e-51 | -8.615850e-47 |
| Msa0381610 | Msa0800770 | -0.803414 | 3.526289e-49 | -8.615850e-47 |
| Msa0422180 | Msa0800770 | 0.845848 | 3.144133e-59 | -8.615850e-47 |
| Msa0422280 | Msa0800770 | 0.813143 | 2.970937e-51 | -8.615850e-47 |
| Msa0429090 | Msa0800770 | 0.840299 | 9.456268e-58 | -8.615850e-47 |
| Msa0432670 | Msa0800770 | 0.804041 | 2.612850e-49 | -8.615850e-47 |
| Msa0436370 | Msa0800770 | 0.885778 | 6.063321e-72 | -8.615850e-47 |
| Msa0445280 | Msa0800770 | 0.802313 | 5.952763e-49 | -8.615850e-47 |
| Msa0448550 | Msa0800770 | -0.801792 | 7.618896e-49 | -8.615850e-47 |
| Msa0468800 | Msa0800770 | 0.825608 | 4.271897e-54 | -8.615850e-47 |
| Msa0469940 | Msa0800770 | -0.800872 | 1.175286e-48 | -8.615850e-47 |
| Msa0475500 | Msa0800770 | 0.822642 | 2.123585e-53 | -8.615850e-47 |
| Msa0241190 | Msa0800770 | 0.814556 | 1.450630e-51 | -8.615850e-47 |
| Msa0243250 | Msa0800770 | 0.808241 | 3.410880e-50 | -8.615850e-47 |
| Msa0259500 | Msa0800770 | 0.800951 | 1.132696e-48 | -8.615850e-47 |
| Msa0264780 | Msa0800770 | 0.832044 | 1.183166e-55 | -8.615850e-47 |
| Msa0269560 | Msa0800770 | 0.813347 | 2.679769e-51 | -8.615850e-47 |
| Msa0274630 | Msa0800770 | 0.843038 | 1.791350e-58 | -8.615850e-47 |
| Msa0284520 | Msa0800770 | 0.813992 | 1.932666e-51 | -8.615850e-47 |
| Msa0312530 | Msa0800770 | 0.814581 | 1.432230e-51 | -8.615850e-47 |
| Msa0314060 | Msa0800770 | 0.847544 | 1.081180e-59 | -8.615850e-47 |
| Msa0317730 | Msa0800770 | 0.801340 | 9.431787e-49 | -8.615850e-47 |
| Msa0322680 | Msa0800770 | 0.803790 | 2.945789e-49 | -8.615850e-47 |
| Msa0338730 | Msa0800770 | -0.801450 | 8.951433e-49 | -8.615850e-47 |
| Msa0341540 | Msa0800770 | 0.808449 | 3.081041e-50 | -8.615850e-47 |
| Msa0342070 | Msa0800770 | 0.839964 | 1.156508e-57 | -8.615850e-47 |
| Msa0344690 | Msa0800770 | -0.800955 | 1.130223e-48 | -8.615850e-47 |
| Msa0349700 | Msa0800770 | 0.807817 | 4.198909e-50 | -8.615850e-47 |
| Msa0356890 | Msa0800770 | -0.807772 | 4.293838e-50 | -8.615850e-47 |
| Msa0484780 | Msa0800770 | 0.806827 | 6.808988e-50 | -8.615850e-47 |
| Msa0514610 | Msa0800770 | 0.819657 | 1.035050e-52 | -8.615850e-47 |
| Msa0516370 | Msa0800770 | 0.849430 | 3.251019e-60 | -8.615850e-47 |
| Msa0521670 | Msa0800770 | 0.808673 | 2.758572e-50 | -8.615850e-47 |
| Msa0525610 | Msa0800770 | 0.810831 | 9.477651e-51 | -8.615850e-47 |
| Msa0526100 | Msa0800770 | -0.811629 | 6.361541e-51 | -8.615850e-47 |
| Msa0559500 | Msa0800770 | 0.837142 | 6.188468e-57 | -8.615850e-47 |
| Msa0572420 | Msa0800770 | 0.858490 | 7.947528e-63 | -8.615850e-47 |
| Msa0572480 | Msa0800770 | 0.888852 | 4.086116e-73 | -8.615850e-47 |
| Msa0574760 | Msa0800770 | -0.829324 | 5.487586e-55 | -8.615850e-47 |
| Msa0576890 | Msa0800770 | 0.801545 | 8.561106e-49 | -8.615850e-47 |
| Msa0579660 | Msa0800770 | 0.819249 | 1.282196e-52 | -8.615850e-47 |
| Msa0581050 | Msa0800770 | 0.824759 | 6.782948e-54 | -8.615850e-47 |
| Msa0598160 | Msa0800770 | 0.808398 | 3.159135e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0800770 | MtrunA17_Chr5g0407081 | 95.662 | 853 | 29 | 3 | 1 | 852 | 1 | 846 | 0.0 | 1661 |
| Msa0800770 | MtrunA17_Chr5g0408021 | 86.667 | 105 | 14 | 0 | 459 | 563 | 5 | 109 | 1.68e-52 | 178 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0800770 | AT2G17550.1 | 40.904 | 885 | 378 | 33 | 1 | 851 | 1 | 774 | 3.02e-165 | 499 |
| Msa0800770 | AT2G17550.2 | 41.242 | 805 | 335 | 30 | 80 | 851 | 1 | 700 | 3.32e-150 | 458 |
Find 174 sgRNAs with CRISPR-Local
Find 303 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTTATTCACTTGATAATT+TGG | 0.153873 | 5_3:-14283280 | Msa0800770:CDS |
| ATTCAGACTCAGACGGTTTC+TGG | 0.172392 | 5_3:+14283703 | None:intergenic |
| AACATGCACAATTTGGATTT+AGG | 0.175010 | 5_3:-14282778 | Msa0800770:three_prime_UTR |
| CTGGTTTATACTTTGGTTCT+TGG | 0.181940 | 5_3:-14283626 | Msa0800770:CDS |
| TGATAAGAACATGCACAATT+TGG | 0.184929 | 5_3:-14282785 | Msa0800770:three_prime_UTR |
| TACATGATCATTACACAAAT+TGG | 0.220293 | 5_3:-14283064 | Msa0800770:three_prime_UTR |
| TAAAAGAATAAGTGAAAATA+TGG | 0.225343 | 5_3:-14285900 | Msa0800770:CDS |
| GAATCACTTTCAGTTGTTCT+TGG | 0.245622 | 5_3:-14283438 | Msa0800770:CDS |
| GTTATAAGATTTGATCATTA+AGG | 0.248170 | 5_3:+14285484 | None:intergenic |
| ACATGCACAATTTGGATTTA+GGG | 0.279472 | 5_3:-14282777 | None:intergenic |
| AGGAACTGTTGAAGTTAGTA+TGG | 0.285855 | 5_3:-14283344 | Msa0800770:CDS |
| TTTGTGAGCATGGACTTTCT+TGG | 0.293337 | 5_3:+14286913 | None:intergenic |
| AGAGATTTACTTGTTGCTTC+TGG | 0.294038 | 5_3:-14283645 | Msa0800770:CDS |
| TGGAATAAGTCTTTGTTAAG+AGG | 0.301570 | 5_3:-14283606 | Msa0800770:CDS |
| TGAATCTCTACTGATAAATT+CGG | 0.305013 | 5_3:+14285085 | None:intergenic |
| AAAATCATCATACCAATAAA+TGG | 0.305159 | 5_3:+14287719 | None:intergenic |
| AAATACAAACAGGATCTTTC+AGG | 0.313229 | 5_3:-14284920 | Msa0800770:CDS |
| AGCAAAACTGTATCTCAAAT+TGG | 0.317168 | 5_3:+14284659 | None:intergenic |
| GCTAGAAACACTGCCGATTT+CGG | 0.329590 | 5_3:+14285625 | None:intergenic |
| GAAATGAGTCGAATTCATTA+TGG | 0.333811 | 5_3:+14285801 | None:intergenic |
| GCAGTGTTCATGAAGACTTT+TGG | 0.334930 | 5_3:-14284079 | Msa0800770:CDS |
| GATGGATGGAGCCAGAGTTT+TGG | 0.337357 | 5_3:-14285752 | Msa0800770:CDS |
| CAATGAAGAGATCAATATAT+TGG | 0.342843 | 5_3:-14283217 | Msa0800770:CDS |
| CTTACAGGTAATTCTCCTTC+TGG | 0.343654 | 5_3:+14286579 | None:intergenic |
| TGAATATCTTGTAGCATTGT+AGG | 0.346382 | 5_3:-14287078 | Msa0800770:intron |
| TCTGAAAATAATCGTTATTC+AGG | 0.352379 | 5_3:-14286061 | Msa0800770:CDS |
| TGTGTGAGTGTGTGTGATGT+AGG | 0.353846 | 5_3:-14282967 | Msa0800770:three_prime_UTR |
| CATGAGTGAAGTGAATAATT+AGG | 0.357648 | 5_3:-14282914 | Msa0800770:three_prime_UTR |
| ATATCAAGCAGCAAGGTTTC+AGG | 0.359927 | 5_3:-14285663 | Msa0800770:CDS |
| GACATCAGCTCTGGTTTAAC+TGG | 0.360505 | 5_3:-14283975 | Msa0800770:intron |
| GCTACAAAACTATATCAATT+AGG | 0.361532 | 5_3:+14283031 | None:intergenic |
| AGGAACAGGCTACGAGGTTA+AGG | 0.366082 | 5_3:+14288000 | None:intergenic |
| TTGAGGACATGAGAGTCTTT+TGG | 0.374336 | 5_3:-14286990 | Msa0800770:five_prime_UTR |
| AAGCCTTGTGGCGAGGTTGA+TGG | 0.376575 | 5_3:-14285969 | Msa0800770:CDS |
| CTTAGAGTTCTGCTCTTTGA+AGG | 0.378221 | 5_3:+14285524 | None:intergenic |
| AGCCTTGTGGCGAGGTTGAT+GGG | 0.378689 | 5_3:-14285968 | Msa0800770:CDS |
| TCAAGATCAGGAACATCATT+TGG | 0.380795 | 5_3:-14284816 | Msa0800770:CDS |
| ATGGAAGGAGTTCAGTTAGT+TGG | 0.381437 | 5_3:-14285850 | Msa0800770:CDS |
| TGTTCAAAGTTTGCCGAAAT+CGG | 0.382797 | 5_3:-14285638 | Msa0800770:CDS |
| GTTGCTTCTGGTTTATACTT+TGG | 0.384654 | 5_3:-14283633 | Msa0800770:CDS |
| TATTCAATCATGAAGAGAAT+TGG | 0.394633 | 5_3:-14285403 | Msa0800770:CDS |
| GATACATATGCAAAGCCTAT+TGG | 0.399418 | 5_3:-14283582 | Msa0800770:CDS |
| GAATCTCTACTGATAAATTC+GGG | 0.401716 | 5_3:+14285086 | None:intergenic |
| GAGAATTGGACTAGTTCAAC+AGG | 0.404604 | 5_3:-14285389 | Msa0800770:CDS |
| TTGAGTTCAATCCCTTGGTC+TGG | 0.405396 | 5_3:-14283246 | Msa0800770:CDS |
| TCGGGAACATCCACAGGAAA+TGG | 0.408972 | 5_3:-14285717 | Msa0800770:CDS |
| AACATTTGAGTTCAATCCCT+TGG | 0.418429 | 5_3:-14283251 | Msa0800770:CDS |
| TGGAAGGAGTTCAGTTAGTT+GGG | 0.424198 | 5_3:-14285849 | Msa0800770:CDS |
| ATCAACCTCGCCACAAGGCT+TGG | 0.428948 | 5_3:+14285971 | None:intergenic |
| TCGTCTCTTGAGGACAAATC+AGG | 0.438083 | 5_3:+14284023 | None:intergenic |
| ACCCTTGCTCCACCAATGTA+TGG | 0.439738 | 5_3:+14283089 | None:intergenic |
| GACAAATCAGGAGTTGATAC+TGG | 0.442829 | 5_3:+14284035 | None:intergenic |
| GTGTGAGTGTGTGTGATGTA+GGG | 0.445746 | 5_3:-14282966 | Msa0800770:three_prime_UTR |
| GATGTTCCTGATCTTGATAC+AGG | 0.455850 | 5_3:+14284822 | None:intergenic |
| CAACCGCTTCAAGCTTCCTC+CGG | 0.459478 | 5_3:+14284748 | None:intergenic |
| AATGATAATGACAGAGGAAC+AGG | 0.459544 | 5_3:+14287986 | None:intergenic |
| AAGGATCTTACAAGGTTCCT+TGG | 0.460932 | 5_3:+14284852 | None:intergenic |
| GATCAATATATTGGAAAGAG+AGG | 0.461233 | 5_3:-14283208 | Msa0800770:CDS |
| AAAAGAATAAGTGAAAATAT+GGG | 0.462177 | 5_3:-14285899 | Msa0800770:CDS |
| TCATGATTGAATATGCAATC+AGG | 0.468328 | 5_3:+14285413 | None:intergenic |
| CTGATAAATTCGGGGACACT+TGG | 0.469625 | 5_3:+14285095 | None:intergenic |
| TTTGAAATGTGCAGATGAAT+GGG | 0.480380 | 5_3:-14284964 | Msa0800770:CDS |
| GAAGAAACAGAAATACAAAC+AGG | 0.481676 | 5_3:-14284930 | Msa0800770:CDS |
| AATAATCGTTATTCAGGCGC+TGG | 0.481780 | 5_3:-14286055 | Msa0800770:CDS |
| TCTGCTCCTGTATCAAGATC+AGG | 0.482542 | 5_3:-14284828 | Msa0800770:CDS |
| ATTTGACGAGCAATAAGCTT+AGG | 0.486795 | 5_3:+14285218 | None:intergenic |
| GGAATAAGTCTTTGTTAAGA+GGG | 0.490427 | 5_3:-14283605 | Msa0800770:CDS |
| CTTGTGATGTCTCTCATTGT+CGG | 0.490601 | 5_3:+14284570 | None:intergenic |
| GGAACAGGCTACGAGGTTAA+GGG | 0.490615 | 5_3:+14288001 | None:intergenic |
| AATTTATCAGTAGAGATTCA+AGG | 0.492213 | 5_3:-14285082 | Msa0800770:CDS |
| AGTTCAACAGGGACTTTACC+AGG | 0.494157 | 5_3:-14285377 | Msa0800770:CDS |
| CTACAAAGAAAAGTTAGAAC+GGG | 0.495839 | 5_3:-14287048 | Msa0800770:five_prime_UTR |
| GAAACCGTCTGAGTCTGAAT+TGG | 0.496615 | 5_3:-14283700 | Msa0800770:CDS |
| TCTCTTATGTAAGATTCTGC+TGG | 0.500088 | 5_3:+14283663 | None:intergenic |
| TTCCATACATTGGTGGAGCA+AGG | 0.501510 | 5_3:-14283091 | Msa0800770:three_prime_UTR |
| CAGGTTTCAAGATAACGATC+CGG | 0.509636 | 5_3:+14285438 | None:intergenic |
| CTGCCATGTGCTTGATCGAT+TGG | 0.510292 | 5_3:+14286000 | None:intergenic |
| CTTCCTCCGGATATGAGCCC+CGG | 0.510820 | 5_3:+14284761 | None:intergenic |
| GCCTTTGTTCTCCAAAACTC+TGG | 0.512265 | 5_3:+14285741 | None:intergenic |
| GCAACAGGTTTAGTGTCTAC+AGG | 0.513735 | 5_3:+14285932 | None:intergenic |
| AGGTTTCAAGATAACGATCC+GGG | 0.519687 | 5_3:+14285439 | None:intergenic |
| TCCATGTTGTCGCCGCCTCA+AGG | 0.519717 | 5_3:-14283369 | Msa0800770:CDS |
| AACAGTTCCTTTCCTTGAGG+CGG | 0.522924 | 5_3:+14283357 | None:intergenic |
| GAATGATGAAAATTCTATGA+AGG | 0.523675 | 5_3:-14283511 | Msa0800770:CDS |
| TTCTGAAGTTCCATTTCCTG+TGG | 0.524225 | 5_3:+14285707 | None:intergenic |
| TGAGCAGACTGAATTTGAGT+TGG | 0.524933 | 5_3:+14285160 | None:intergenic |
| TGGTAAGAGAAATCAATCAA+TGG | 0.527992 | 5_3:-14284619 | Msa0800770:CDS |
| ACACTGCTGCACACAGATGC+AGG | 0.529299 | 5_3:+14284095 | None:intergenic |
| CGGATCGTTATCTTGAAACC+TGG | 0.530582 | 5_3:-14285437 | Msa0800770:CDS |
| ATGTGGGTGTTGTTGAAAAG+TGG | 0.530723 | 5_3:+14287808 | None:intergenic |
| TGAATTCAATCAAGGGAGGA+TGG | 0.531417 | 5_3:-14286936 | Msa0800770:CDS |
| TTGAATATGCAATCAGGACC+AGG | 0.536062 | 5_3:+14285419 | None:intergenic |
| TTGTTGATTTGGCAGAGCTA+AGG | 0.541285 | 5_3:-14283776 | Msa0800770:intron |
| CACAGCAGTCTCGTCTCTTG+AGG | 0.541373 | 5_3:+14284013 | None:intergenic |
| GAAAGCTTCTACTAGAGGAC+CGG | 0.541402 | 5_3:-14284794 | Msa0800770:CDS |
| ATTATCAAGTAGAAGAAGAC+TGG | 0.542682 | 5_3:-14286084 | Msa0800770:CDS |
| GAATATCTTGTAGCATTGTA+GGG | 0.545861 | 5_3:-14287077 | Msa0800770:intron |
| CTGCACACAGATGCAGGACT+CGG | 0.548951 | 5_3:+14284101 | None:intergenic |
| AGAGAATCGAAACAACGAAA+AGG | 0.551559 | 5_3:-14285588 | Msa0800770:CDS |
| CTGAATCTAGACAGTGTCAA+AGG | 0.551664 | 5_3:+14283411 | None:intergenic |
| AGTGAATAAAGAGACATATC+CGG | 0.556492 | 5_3:+14283291 | None:intergenic |
| TTTCACAAAGTTAAAGATGA+CGG | 0.556814 | 5_3:-14285782 | Msa0800770:CDS |
| AAGGCGTCGGGAACATCCAC+AGG | 0.557978 | 5_3:-14285723 | Msa0800770:CDS |
| TTCAAGATAACGATCCGGGT+TGG | 0.558627 | 5_3:+14285443 | None:intergenic |
| AAAGATGACGGCGATGATGA+TGG | 0.560500 | 5_3:-14285770 | Msa0800770:CDS |
| TCCATACATTGGTGGAGCAA+GGG | 0.560515 | 5_3:-14283090 | Msa0800770:three_prime_UTR |
| TGATTGAGAAAATAGTTATG+TGG | 0.562809 | 5_3:+14287791 | None:intergenic |
| GTGTCTCAATATCACTTCCT+CGG | 0.563040 | 5_3:+14285264 | None:intergenic |
| CATTGATTATTCCAGACCAA+GGG | 0.564059 | 5_3:+14283235 | None:intergenic |
| GCCTTGTGGCGAGGTTGATG+GGG | 0.564771 | 5_3:-14285967 | Msa0800770:CDS |
| TGTGAGTGTGTGTGATGTAG+GGG | 0.567641 | 5_3:-14282965 | Msa0800770:three_prime_UTR |
| GCAATAAGCTTAGGATCAGA+TGG | 0.568354 | 5_3:+14285227 | None:intergenic |
| ACAAATCAAGCAAAATCTTG+TGG | 0.568803 | 5_3:+14283466 | None:intergenic |
| GTTGTCGCCGCCTCAAGGAA+AGG | 0.569359 | 5_3:-14283364 | Msa0800770:CDS |
| ACAGAGAGTTGTTGTCTCCA+AGG | 0.575318 | 5_3:-14284869 | Msa0800770:CDS |
| ACACATGGAAGATGAAATTG+AGG | 0.575323 | 5_3:-14287007 | Msa0800770:five_prime_UTR |
| TGTTTCGTTATATCCTTCAC+CGG | 0.577070 | 5_3:-14283310 | Msa0800770:CDS |
| CCGTCGTTCATAAGAACTGT+TGG | 0.578230 | 5_3:+14284543 | None:intergenic |
| GGAACTGTTGAAGTTAGTAT+GGG | 0.578282 | 5_3:-14283343 | Msa0800770:CDS |
| GAGCCCCGGTTAAAATGTGC+CGG | 0.579772 | 5_3:+14284775 | None:intergenic |
| ACTACAAAGAAAAGTTAGAA+CGG | 0.581662 | 5_3:-14287049 | Msa0800770:five_prime_UTR |
| TCATTGATTATTCCAGACCA+AGG | 0.588363 | 5_3:+14283234 | None:intergenic |
| TCCTTGAGGCGGCGACAACA+TGG | 0.589447 | 5_3:+14283368 | None:intergenic |
| TCTTCTATACTATGTCTACC+TGG | 0.595004 | 5_3:+14285359 | None:intergenic |
| TGATGTCTCTCATTGTCGGA+CGG | 0.595229 | 5_3:+14284574 | None:intergenic |
| TAAAGAGTTCCATACATTGG+TGG | 0.596732 | 5_3:-14283098 | Msa0800770:three_prime_UTR |
| ATTTGGAAAGCTTCTACTAG+AGG | 0.598028 | 5_3:-14284799 | Msa0800770:CDS |
| TAAAGAGACATATCCGGTGA+AGG | 0.598715 | 5_3:+14283297 | None:intergenic |
| GTTGAAACATCTCAGAAGTA+CGG | 0.598762 | 5_3:-14286603 | Msa0800770:CDS |
| AATTCTAGTGGAGTGACACA+TGG | 0.599477 | 5_3:-14287022 | Msa0800770:five_prime_UTR |
| CAAACAAGGGAACAAATGGA+AGG | 0.600461 | 5_3:-14285865 | Msa0800770:CDS |
| ACCCCATCAACCTCGCCACA+AGG | 0.600954 | 5_3:+14285966 | None:intergenic |
| CAATCAATGGTAGAATCACA+TGG | 0.601271 | 5_3:-14284606 | Msa0800770:CDS |
| TCTTGATACAGGAGCAGACA+AGG | 0.604956 | 5_3:+14284833 | None:intergenic |
| GATTGAGAAAATAGTTATGT+GGG | 0.606247 | 5_3:+14287792 | None:intergenic |
| TCTCAGAAGTACGGTCCAGA+AGG | 0.606677 | 5_3:-14286594 | Msa0800770:CDS |
| AAAGAATAAGTGAAAATATG+GGG | 0.610226 | 5_3:-14285898 | Msa0800770:CDS |
| TTCAACAGTTCCTTTCCTTG+AGG | 0.611963 | 5_3:+14283354 | None:intergenic |
| TTGAAGCATATCAAGCAGCA+AGG | 0.612487 | 5_3:-14285670 | Msa0800770:CDS |
| GGAAAAGGTTATGCGGTCCG+AGG | 0.614051 | 5_3:-14285281 | Msa0800770:CDS |
| CACATAATACAAGTATGCAA+AGG | 0.618748 | 5_3:-14285556 | Msa0800770:CDS |
| ATGACGGCGATGATGATGGA+TGG | 0.620775 | 5_3:-14285766 | Msa0800770:CDS |
| CTGCACCAAGCCTTGTGGCG+AGG | 0.620894 | 5_3:-14285976 | Msa0800770:CDS |
| CAATAAAGAGTTCCATACAT+TGG | 0.622061 | 5_3:-14283101 | Msa0800770:three_prime_UTR |
| CTGATGTCTCTGAAAACTTG+TGG | 0.622401 | 5_3:+14283990 | None:intergenic |
| TGCACCAATTCAGACTCAGA+CGG | 0.623432 | 5_3:+14283696 | None:intergenic |
| GAATAAGTCTTTGTTAAGAG+GGG | 0.627428 | 5_3:-14283604 | Msa0800770:CDS |
| GTGAGTGTGTGTGATGTAGG+GGG | 0.628186 | 5_3:-14282964 | Msa0800770:three_prime_UTR |
| ACTTGATTCTAGTGATGTCG+AGG | 0.630630 | 5_3:-14283739 | Msa0800770:CDS |
| ACAAGATCATACGAAGGTGA+AGG | 0.634923 | 5_3:-14285131 | Msa0800770:CDS |
| TATCCAATCGATCAAGCACA+TGG | 0.637814 | 5_3:-14286003 | Msa0800770:CDS |
| TAGAACGGGCGTAATTCTAG+TGG | 0.640075 | 5_3:-14287034 | Msa0800770:five_prime_UTR |
| GAGCAGACAAGGATCTTACA+AGG | 0.642350 | 5_3:+14284844 | None:intergenic |
| AACTGTCGGAAAAGGTTATG+CGG | 0.647191 | 5_3:-14285288 | Msa0800770:CDS |
| TAACCGGGGCTCATATCCGG+AGG | 0.647535 | 5_3:-14284764 | Msa0800770:CDS |
| TTGGAGACAACAACTCTCTG+TGG | 0.648215 | 5_3:+14284871 | None:intergenic |
| TAGATGCATCTTCTCCAACC+CGG | 0.653096 | 5_3:-14285457 | Msa0800770:CDS |
| ACAATGAGAGACATCACAAG+TGG | 0.658345 | 5_3:-14284567 | Msa0800770:CDS |
| GCTCACAAAAGACATCATAG+TGG | 0.659606 | 5_3:-14286899 | Msa0800770:intron |
| TCTTGTTGAAGAACTCACAA+AGG | 0.659944 | 5_3:-14283163 | Msa0800770:CDS |
| GCAGACTGCACCAAGCCTTG+TGG | 0.667683 | 5_3:-14285981 | Msa0800770:CDS |
| AATCTAGACAGTGTCAAAGG+TGG | 0.669822 | 5_3:+14283414 | None:intergenic |
| TATCCGGAGGAAGCTTGAAG+CGG | 0.676693 | 5_3:-14284751 | Msa0800770:CDS |
| CGTTTGAAATGCGAACTGCA+AGG | 0.679951 | 5_3:-14285314 | Msa0800770:CDS |
| GTGACTAATGATAATGACAG+AGG | 0.684571 | 5_3:+14287980 | None:intergenic |
| AATCTCTACTGATAAATTCG+GGG | 0.689534 | 5_3:+14285087 | None:intergenic |
| CACACAGATGCAGGACTCGG+AGG | 0.714130 | 5_3:+14284104 | None:intergenic |
| CCAACAGTTCTTATGAACGA+CGG | 0.720547 | 5_3:-14284543 | Msa0800770:CDS |
| GAATCAACAAGATCATACGA+AGG | 0.725807 | 5_3:-14285137 | Msa0800770:CDS |
| GTGAAGGATATAACGAAACA+CGG | 0.727910 | 5_3:+14283313 | None:intergenic |
| ACAGTTCTTATGAACGACGG+TGG | 0.731871 | 5_3:-14284540 | Msa0800770:CDS |
| TGACAGAGGAACAGGCTACG+AGG | 0.744006 | 5_3:+14287994 | None:intergenic |
| AGAATTGGACTAGTTCAACA+GGG | 0.749710 | 5_3:-14285388 | Msa0800770:CDS |
| TCTTTAGGAGAACTACACTG+AGG | 0.805453 | 5_3:-14284129 | Msa0800770:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAGAATAAGTGAAAATA+TGG | - | chr5_3:14284937-14284956 | Msa0800770:CDS | 15.0% |
| !! | AAAAGAATAAGTGAAAATAT+GGG | - | chr5_3:14284938-14284957 | Msa0800770:CDS | 15.0% |
| !! | AACAAGATAATAAAAAATCA+AGG | - | chr5_3:14286497-14286516 | Msa0800770:intron | 15.0% |
| !! | ACAAGATAATAAAAAATCAA+GGG | - | chr5_3:14286498-14286517 | Msa0800770:intron | 15.0% |
| !!! | TTCAAAAAGTCTTCTTTTTT+TGG | - | chr5_3:14282912-14282931 | Msa0800770:three_prime_UTR | 20.0% |
| !!! | TCAAAAAGTCTTCTTTTTTT+GGG | - | chr5_3:14282913-14282932 | Msa0800770:three_prime_UTR | 20.0% |
| !! | AAAATCATCATACCAATAAA+TGG | + | chr5_3:14283121-14283140 | None:intergenic | 20.0% |
| !! | TTCAAAAGCTTATTTGATAT+TGG | - | chr5_3:14283442-14283461 | Msa0800770:CDS | 20.0% |
| !!! | ACTTTTTTGAATTCAATCAA+GGG | - | chr5_3:14283894-14283913 | Msa0800770:intron | 20.0% |
| !! | TTCGTATAAAAACAATATGA+TGG | + | chr5_3:14284320-14284339 | None:intergenic | 20.0% |
| !! | ATCTTTCTCAATATTCTAAA+AGG | + | chr5_3:14284501-14284520 | None:intergenic | 20.0% |
| !! | ACTAAATTCAATTCAACAAA+TGG | + | chr5_3:14284712-14284731 | None:intergenic | 20.0% |
| !! | AAAGAATAAGTGAAAATATG+GGG | - | chr5_3:14284939-14284958 | Msa0800770:CDS | 20.0% |
| !! | GTTATAAGATTTGATCATTA+AGG | + | chr5_3:14285356-14285375 | None:intergenic | 20.0% |
| !!! | TCTTAGCTTTATATTTATTG+TGG | - | chr5_3:14286458-14286477 | Msa0800770:intron | 20.0% |
| !!! | TCTTTATTCACTTGATAATT+TGG | - | chr5_3:14287557-14287576 | Msa0800770:intron | 20.0% |
| ! | CTTTGTGAAAAAATGGAAAT+GGG | + | chr5_3:14282997-14283016 | None:intergenic | 25.0% |
| ! | ACTTTGTGAAAAAATGGAAA+TGG | + | chr5_3:14282998-14283017 | None:intergenic | 25.0% |
| ! | CTTCAAACTTTGTGAAAAAA+TGG | + | chr5_3:14283004-14283023 | None:intergenic | 25.0% |
| ! | GATTGAGAAAATAGTTATGT+GGG | + | chr5_3:14283048-14283067 | None:intergenic | 25.0% |
| ! | TGATTGAGAAAATAGTTATG+TGG | + | chr5_3:14283049-14283068 | None:intergenic | 25.0% |
| !! | TGAATTTTCTCACCATTTAT+TGG | - | chr5_3:14283106-14283125 | Msa0800770:three_prime_UTR | 25.0% |
| !!! | TTTTTTCTTTTGTGTGTGTT+TGG | - | chr5_3:14283138-14283157 | Msa0800770:exon | 25.0% |
| ! | TTGTTGTCAAAGTTATGATT+TGG | - | chr5_3:14283242-14283261 | Msa0800770:CDS | 25.0% |
| ! | TCAACTGAAAACAAGAAATT+GGG | + | chr5_3:14283406-14283425 | None:intergenic | 25.0% |
| ! | CTTATTTGATATTGGAAGAT+TGG | - | chr5_3:14283450-14283469 | Msa0800770:CDS | 25.0% |
| !!! | AGTTAGTTGTTTCTATTGAT+TGG | - | chr5_3:14283484-14283503 | Msa0800770:CDS | 25.0% |
| ! | TTGTTATGTATTTGTCCTTA+AGG | - | chr5_3:14283539-14283558 | Msa0800770:CDS | 25.0% |
| ! | ATGTAAGATTCCTTTATAGA+TGG | + | chr5_3:14283577-14283596 | None:intergenic | 25.0% |
| ! | AAATTTGAAGAAAGATGTGT+TGG | - | chr5_3:14283687-14283706 | Msa0800770:CDS | 25.0% |
| ! | ACTACAAAGAAAAGTTAGAA+CGG | - | chr5_3:14283788-14283807 | Msa0800770:intron | 25.0% |
| !!! | CACTTTTTTGAATTCAATCA+AGG | - | chr5_3:14283893-14283912 | Msa0800770:intron | 25.0% |
| ! | TACTAAAAACAATCAAGCAA+AGG | + | chr5_3:14284144-14284163 | None:intergenic | 25.0% |
| ! | CATATCGAACATAATTACAA+CGG | + | chr5_3:14284476-14284495 | None:intergenic | 25.0% |
| ! | CAAGAACTATGGTTTATATT+TGG | + | chr5_3:14284666-14284685 | None:intergenic | 25.0% |
| ! | TCTGAAAATAATCGTTATTC+AGG | - | chr5_3:14284776-14284795 | Msa0800770:CDS | 25.0% |
| !! | TCACTTATTCTTTTATCTGA+TGG | + | chr5_3:14284932-14284951 | None:intergenic | 25.0% |
| ! | TTTCACAAAGTTAAAGATGA+CGG | - | chr5_3:14285055-14285074 | Msa0800770:CDS | 25.0% |
| ! | TATTCAATCATGAAGAGAAT+TGG | - | chr5_3:14285434-14285453 | Msa0800770:CDS | 25.0% |
| !! | TAGTATAGAAGATTTTCTTG+AGG | - | chr5_3:14285489-14285508 | Msa0800770:CDS | 25.0% |
| ! | TGAATCTCTACTGATAAATT+CGG | + | chr5_3:14285755-14285774 | None:intergenic | 25.0% |
| ! | AATTTATCAGTAGAGATTCA+AGG | - | chr5_3:14285755-14285774 | Msa0800770:CDS | 25.0% |
| !!! | TAGCTTTATATTTATTGTGG+AGG | - | chr5_3:14286461-14286480 | Msa0800770:intron | 25.0% |
| !! | AGCTTTATATTTATTGTGGA+GGG | - | chr5_3:14286462-14286481 | Msa0800770:intron | 25.0% |
| ! | ATCTTAAAACCGCAATAAAA+AGG | - | chr5_3:14286590-14286609 | Msa0800770:CDS | 25.0% |
| ! | ATGAAATATAAAGGTCATCA+TGG | + | chr5_3:14286647-14286666 | None:intergenic | 25.0% |
| ! | CAACTCTGAATGAAATATAA+AGG | + | chr5_3:14286656-14286675 | None:intergenic | 25.0% |
| !! | CTTTTCTTGAATCAAAACTA+TGG | + | chr5_3:14286928-14286947 | None:intergenic | 25.0% |
| ! | AGTTTGAAAAGATATTCACT+CGG | + | chr5_3:14287020-14287039 | None:intergenic | 25.0% |
| !! | GATTTATTTGCTTGTTGATT+TGG | - | chr5_3:14287050-14287069 | Msa0800770:five_prime_UTR | 25.0% |
| ! | TCAAAAACAGAATTTCCAAT+AGG | + | chr5_3:14287273-14287292 | None:intergenic | 25.0% |
| !!! | AAATTCTGTTTTTGAAGAAG+TGG | - | chr5_3:14287278-14287297 | Msa0800770:intron | 25.0% |
| ! | GAATGATGAAAATTCTATGA+AGG | - | chr5_3:14287326-14287345 | Msa0800770:intron | 25.0% |
| ! | CAATGAAGAGATCAATATAT+TGG | - | chr5_3:14287620-14287639 | Msa0800770:intron | 25.0% |
| ! | TACATGATCATTACACAAAT+TGG | - | chr5_3:14287773-14287792 | Msa0800770:five_prime_UTR | 25.0% |
| ! | GCTACAAAACTATATCAATT+AGG | + | chr5_3:14287809-14287828 | None:intergenic | 25.0% |
| !!! | AATTGATATAGTTTTGTAGC+TGG | - | chr5_3:14287809-14287828 | Msa0800770:five_prime_UTR | 25.0% |
| !! | AATGGGTTGAACTAAAAAAG+TGG | + | chr5_3:14282980-14282999 | None:intergenic | 30.0% |
| TGAATGAATCATTCTCTGTT+TGG | - | chr5_3:14283177-14283196 | Msa0800770:CDS | 30.0% | |
| TGCTCAAGAAATTTGATGTT+TGG | - | chr5_3:14283289-14283308 | Msa0800770:CDS | 30.0% | |
| !!! | GAAACTGATTTTTGAGTTGT+TGG | - | chr5_3:14283336-14283355 | Msa0800770:CDS | 30.0% |
| GTCAACTGAAAACAAGAAAT+TGG | + | chr5_3:14283407-14283426 | None:intergenic | 30.0% | |
| TGAATATCTTGTAGCATTGT+AGG | - | chr5_3:14283759-14283778 | Msa0800770:CDS | 30.0% | |
| GAATATCTTGTAGCATTGTA+GGG | - | chr5_3:14283760-14283779 | Msa0800770:CDS | 30.0% | |
| CTACAAAGAAAAGTTAGAAC+GGG | - | chr5_3:14283789-14283808 | Msa0800770:intron | 30.0% | |
| ! | TTTTTGAATTCAATCAAGGG+AGG | - | chr5_3:14283897-14283916 | Msa0800770:intron | 30.0% |
| TCCATTCATGTTATGATGAA+AGG | - | chr5_3:14284004-14284023 | Msa0800770:CDS | 30.0% | |
| ACCTTTCATCATAACATGAA+TGG | + | chr5_3:14284008-14284027 | None:intergenic | 30.0% | |
| AAAAACAATCAAGCAAAGGA+GGG | + | chr5_3:14284140-14284159 | None:intergenic | 30.0% | |
| TAAAAACAATCAAGCAAAGG+AGG | + | chr5_3:14284141-14284160 | None:intergenic | 30.0% | |
| ACATATGAAGAGAAACTTAC+AGG | + | chr5_3:14284276-14284295 | None:intergenic | 30.0% | |
| ! | GAAATATGATGGTACTTTTC+TGG | + | chr5_3:14284390-14284409 | None:intergenic | 30.0% |
| AAAAGAAGGAGGAAATATGA+TGG | + | chr5_3:14284401-14284420 | None:intergenic | 30.0% | |
| ! | GAAACTGTCATTTATAGAGA+TGG | + | chr5_3:14284595-14284614 | None:intergenic | 30.0% |
| CTCTATAAATGACAGTTTCA+TGG | - | chr5_3:14284596-14284615 | Msa0800770:CDS | 30.0% | |
| ATAAACCATAGTTCTTGTTC+TGG | - | chr5_3:14284669-14284688 | Msa0800770:CDS | 30.0% | |
| TAATACCAGAACAAGAACTA+TGG | + | chr5_3:14284677-14284696 | None:intergenic | 30.0% | |
| ATTATCAAGTAGAAGAAGAC+TGG | - | chr5_3:14284753-14284772 | Msa0800770:CDS | 30.0% | |
| ! | TTTTCAAACAAGGGAACAAA+TGG | - | chr5_3:14284968-14284987 | Msa0800770:CDS | 30.0% |
| GAAATGAGTCGAATTCATTA+TGG | + | chr5_3:14285039-14285058 | None:intergenic | 30.0% | |
| CACATAATACAAGTATGCAA+AGG | - | chr5_3:14285281-14285300 | Msa0800770:CDS | 30.0% | |
| TCATGATTGAATATGCAATC+AGG | + | chr5_3:14285427-14285446 | None:intergenic | 30.0% | |
| ! | TATAGAAGATTTTCTTGAGG+AGG | - | chr5_3:14285492-14285511 | Msa0800770:CDS | 30.0% |
| AATCTCTACTGATAAATTCG+GGG | + | chr5_3:14285753-14285772 | None:intergenic | 30.0% | |
| GAATCTCTACTGATAAATTC+GGG | + | chr5_3:14285754-14285773 | None:intergenic | 30.0% | |
| !!! | TTTTGAAATGTGCAGATGAA+TGG | - | chr5_3:14285872-14285891 | Msa0800770:CDS | 30.0% |
| ! | TTTGAAATGTGCAGATGAAT+GGG | - | chr5_3:14285873-14285892 | Msa0800770:CDS | 30.0% |
| GAAGAAACAGAAATACAAAC+AGG | - | chr5_3:14285907-14285926 | Msa0800770:CDS | 30.0% | |
| AAATACAAACAGGATCTTTC+AGG | - | chr5_3:14285917-14285936 | Msa0800770:CDS | 30.0% | |
| AGCAAAACTGTATCTCAAAT+TGG | + | chr5_3:14286181-14286200 | None:intergenic | 30.0% | |
| TGGTAAGAGAAATCAATCAA+TGG | - | chr5_3:14286218-14286237 | Msa0800770:intron | 30.0% | |
| ! | TTTTCTGCTATATGCTCTTT+AGG | - | chr5_3:14286693-14286712 | Msa0800770:intron | 30.0% |
| !!! | AGTTTTGATTCAAGAAAAGC+TGG | - | chr5_3:14286929-14286948 | Msa0800770:CDS | 30.0% |
| TGGAATAAGTCTTTGTTAAG+AGG | - | chr5_3:14287231-14287250 | Msa0800770:intron | 30.0% | |
| GGAATAAGTCTTTGTTAAGA+GGG | - | chr5_3:14287232-14287251 | Msa0800770:intron | 30.0% | |
| GAATAAGTCTTTGTTAAGAG+GGG | - | chr5_3:14287233-14287252 | Msa0800770:intron | 30.0% | |
| ACAAATCAAGCAAAATCTTG+TGG | + | chr5_3:14287374-14287393 | None:intergenic | 30.0% | |
| AGTGAATAAAGAGACATATC+CGG | + | chr5_3:14287549-14287568 | None:intergenic | 30.0% | |
| GATCAATATATTGGAAAGAG+AGG | - | chr5_3:14287629-14287648 | Msa0800770:intron | 30.0% | |
| CAATAAAGAGTTCCATACAT+TGG | - | chr5_3:14287736-14287755 | Msa0800770:five_prime_UTR | 30.0% | |
| CATGAGTGAAGTGAATAATT+AGG | - | chr5_3:14287923-14287942 | Msa0800770:five_prime_UTR | 30.0% | |
| TGATAAGAACATGCACAATT+TGG | - | chr5_3:14288052-14288071 | Msa0800770:five_prime_UTR | 30.0% | |
| ! | AATGATAATGACAGAGGAAC+AGG | + | chr5_3:14282854-14282873 | None:intergenic | 35.0% |
| ! | GTGACTAATGATAATGACAG+AGG | + | chr5_3:14282860-14282879 | None:intergenic | 35.0% |
| ! | GTTTCTAAGAGTGAATTCTG+AGG | - | chr5_3:14283311-14283330 | Msa0800770:CDS | 35.0% |
| ! | GCAGATTAGTCCATCTATAA+AGG | - | chr5_3:14283564-14283583 | Msa0800770:CDS | 35.0% |
| ACACATGGAAGATGAAATTG+AGG | - | chr5_3:14283830-14283849 | Msa0800770:intron | 35.0% | |
| ! | AGTCTTTTGGTAGACTGTAT+GGG | - | chr5_3:14283860-14283879 | Msa0800770:intron | 35.0% |
| ! | TATGATGTCTTTTGTGAGCA+TGG | + | chr5_3:14283937-14283956 | None:intergenic | 35.0% |
| TGCATATCTTGCTGAAATTC+AGG | - | chr5_3:14284049-14284068 | Msa0800770:CDS | 35.0% | |
| !!! | GTTTTCCCCCTTATTTTCTT+CGG | - | chr5_3:14284071-14284090 | Msa0800770:CDS | 35.0% |
| TGACAACCGAAGAAAATAAG+GGG | + | chr5_3:14284080-14284099 | None:intergenic | 35.0% | |
| GTGACAACCGAAGAAAATAA+GGG | + | chr5_3:14284081-14284100 | None:intergenic | 35.0% | |
| TGTGACAACCGAAGAAAATA+AGG | + | chr5_3:14284082-14284101 | None:intergenic | 35.0% | |
| GTTGAAACATCTCAGAAGTA+CGG | - | chr5_3:14284234-14284253 | Msa0800770:intron | 35.0% | |
| TTCTTATATCCCCTTGTTCT+TGG | - | chr5_3:14284441-14284460 | Msa0800770:intron | 35.0% | |
| TCATTGTTACCAAGAACAAG+GGG | + | chr5_3:14284453-14284472 | None:intergenic | 35.0% | |
| GTCATTGTTACCAAGAACAA+GGG | + | chr5_3:14284454-14284473 | None:intergenic | 35.0% | |
| ATATTGAGAAAGATCCCTCA+AGG | - | chr5_3:14284507-14284526 | Msa0800770:intron | 35.0% | |
| ! | GGGAAGAAGTTTTCAAACAA+GGG | - | chr5_3:14284959-14284978 | Msa0800770:CDS | 35.0% |
| TGTTCAAAGTTTGCCGAAAT+CGG | - | chr5_3:14285199-14285218 | Msa0800770:CDS | 35.0% | |
| AGAGAATCGAAACAACGAAA+AGG | - | chr5_3:14285249-14285268 | Msa0800770:CDS | 35.0% | |
| !! | AGAATTGGACTAGTTCAACA+GGG | - | chr5_3:14285449-14285468 | Msa0800770:CDS | 35.0% |
| TCTTCTATACTATGTCTACC+TGG | + | chr5_3:14285481-14285500 | None:intergenic | 35.0% | |
| ATTTGACGAGCAATAAGCTT+AGG | + | chr5_3:14285622-14285641 | None:intergenic | 35.0% | |
| GAATCAACAAGATCATACGA+AGG | - | chr5_3:14285700-14285719 | Msa0800770:CDS | 35.0% | |
| TCAAGATCAGGAACATCATT+TGG | - | chr5_3:14286021-14286040 | Msa0800770:CDS | 35.0% | |
| ATTTGGAAAGCTTCTACTAG+AGG | - | chr5_3:14286038-14286057 | Msa0800770:CDS | 35.0% | |
| !! | AGATACAGTTTTGCTCTAAG+AGG | - | chr5_3:14286186-14286205 | Msa0800770:intron | 35.0% |
| !!! | GATACAGTTTTGCTCTAAGA+GGG | - | chr5_3:14286187-14286206 | Msa0800770:intron | 35.0% |
| CAATCAATGGTAGAATCACA+TGG | - | chr5_3:14286231-14286250 | Msa0800770:intron | 35.0% | |
| ATTGTGGAGGGATAAATAGA+TGG | - | chr5_3:14286474-14286493 | Msa0800770:intron | 35.0% | |
| ! | CCGTTCATTCCTTTTTATTG+CGG | + | chr5_3:14286602-14286621 | None:intergenic | 35.0% |
| CCGCAATAAAAAGGAATGAA+CGG | - | chr5_3:14286599-14286618 | Msa0800770:CDS | 35.0% | |
| TCTCTTATGTAAGATTCTGC+TGG | + | chr5_3:14287177-14287196 | None:intergenic | 35.0% | |
| ! | AGAGATTTACTTGTTGCTTC+TGG | - | chr5_3:14287192-14287211 | Msa0800770:intron | 35.0% |
| !! | GTTGCTTCTGGTTTATACTT+TGG | - | chr5_3:14287204-14287223 | Msa0800770:intron | 35.0% |
| !! | CTGGTTTATACTTTGGTTCT+TGG | - | chr5_3:14287211-14287230 | Msa0800770:intron | 35.0% |
| GATACATATGCAAAGCCTAT+TGG | - | chr5_3:14287255-14287274 | Msa0800770:intron | 35.0% | |
| GAATCACTTTCAGTTGTTCT+TGG | - | chr5_3:14287399-14287418 | Msa0800770:intron | 35.0% | |
| AGGAACTGTTGAAGTTAGTA+TGG | - | chr5_3:14287493-14287512 | Msa0800770:intron | 35.0% | |
| GGAACTGTTGAAGTTAGTAT+GGG | - | chr5_3:14287494-14287513 | Msa0800770:intron | 35.0% | |
| GTGAAGGATATAACGAAACA+CGG | + | chr5_3:14287527-14287546 | None:intergenic | 35.0% | |
| TGTTTCGTTATATCCTTCAC+CGG | - | chr5_3:14287527-14287546 | Msa0800770:intron | 35.0% | |
| ! | AACATTTGAGTTCAATCCCT+TGG | - | chr5_3:14287586-14287605 | Msa0800770:intron | 35.0% |
| ! | CATTGATTATTCCAGACCAA+GGG | + | chr5_3:14287605-14287624 | None:intergenic | 35.0% |
| ! | TCATTGATTATTCCAGACCA+AGG | + | chr5_3:14287606-14287625 | None:intergenic | 35.0% |
| TCTTGTTGAAGAACTCACAA+AGG | - | chr5_3:14287674-14287693 | Msa0800770:intron | 35.0% | |
| TAAAGAGTTCCATACATTGG+TGG | - | chr5_3:14287739-14287758 | Msa0800770:five_prime_UTR | 35.0% | |
| !! | ATGTGGGTGTTGTTGAAAAG+TGG | + | chr5_3:14283032-14283051 | None:intergenic | 40.0% |
| TGGACTAATCTGCTACCTTA+AGG | + | chr5_3:14283557-14283576 | None:intergenic | 40.0% | |
| AATTCTAGTGGAGTGACACA+TGG | - | chr5_3:14283815-14283834 | Msa0800770:intron | 40.0% | |
| ! | TTGAGGACATGAGAGTCTTT+TGG | - | chr5_3:14283847-14283866 | Msa0800770:intron | 40.0% |
| ! | GAGTCTTTTGGTAGACTGTA+TGG | - | chr5_3:14283859-14283878 | Msa0800770:intron | 40.0% |
| TGAATTCAATCAAGGGAGGA+TGG | - | chr5_3:14283901-14283920 | Msa0800770:intron | 40.0% | |
| TTTGTGAGCATGGACTTTCT+TGG | + | chr5_3:14283927-14283946 | None:intergenic | 40.0% | |
| GCTCACAAAAGACATCATAG+TGG | - | chr5_3:14283938-14283957 | Msa0800770:intron | 40.0% | |
| GACAACCGAAGAAAATAAGG+GGG | + | chr5_3:14284079-14284098 | None:intergenic | 40.0% | |
| CTTACAGGTAATTCTCCTTC+TGG | + | chr5_3:14284261-14284280 | None:intergenic | 40.0% | |
| GGTCAATGATTGTTTCAGCT+AGG | + | chr5_3:14284369-14284388 | None:intergenic | 40.0% | |
| ATATAAGAAGTCCTTCAGGG+GGG | + | chr5_3:14284430-14284449 | None:intergenic | 40.0% | |
| GATATAAGAAGTCCTTCAGG+GGG | + | chr5_3:14284431-14284450 | None:intergenic | 40.0% | |
| GGATATAAGAAGTCCTTCAG+GGG | + | chr5_3:14284432-14284451 | None:intergenic | 40.0% | |
| GGGATATAAGAAGTCCTTCA+GGG | + | chr5_3:14284433-14284452 | None:intergenic | 40.0% | |
| GGTCATTGTTACCAAGAACA+AGG | + | chr5_3:14284455-14284474 | None:intergenic | 40.0% | |
| AATAATCGTTATTCAGGCGC+TGG | - | chr5_3:14284782-14284801 | Msa0800770:CDS | 40.0% | |
| TATCCAATCGATCAAGCACA+TGG | - | chr5_3:14284834-14284853 | Msa0800770:CDS | 40.0% | |
| ! | CTTTTATCTGATGGAGCAAC+AGG | + | chr5_3:14284923-14284942 | None:intergenic | 40.0% |
| ! | GGGGAAGAAGTTTTCAAACA+AGG | - | chr5_3:14284958-14284977 | Msa0800770:CDS | 40.0% |
| CAAACAAGGGAACAAATGGA+AGG | - | chr5_3:14284972-14284991 | Msa0800770:CDS | 40.0% | |
| ATGGAAGGAGTTCAGTTAGT+TGG | - | chr5_3:14284987-14285006 | Msa0800770:CDS | 40.0% | |
| TGGAAGGAGTTCAGTTAGTT+GGG | - | chr5_3:14284988-14285007 | Msa0800770:CDS | 40.0% | |
| !! | TTCTGAAGTTCCATTTCCTG+TGG | + | chr5_3:14285133-14285152 | None:intergenic | 40.0% |
| TTGAAGCATATCAAGCAGCA+AGG | - | chr5_3:14285167-14285186 | Msa0800770:CDS | 40.0% | |
| ATATCAAGCAGCAAGGTTTC+AGG | - | chr5_3:14285174-14285193 | Msa0800770:CDS | 40.0% | |
| CTTAGAGTTCTGCTCTTTGA+AGG | + | chr5_3:14285316-14285335 | None:intergenic | 40.0% | |
| AGGTTTCAAGATAACGATCC+GGG | + | chr5_3:14285401-14285420 | None:intergenic | 40.0% | |
| CAGGTTTCAAGATAACGATC+CGG | + | chr5_3:14285402-14285421 | None:intergenic | 40.0% | |
| TTGAATATGCAATCAGGACC+AGG | + | chr5_3:14285421-14285440 | None:intergenic | 40.0% | |
| !! | GAGAATTGGACTAGTTCAAC+AGG | - | chr5_3:14285448-14285467 | Msa0800770:CDS | 40.0% |
| GAACTGCAAGGAAAAACTGT+CGG | - | chr5_3:14285535-14285554 | Msa0800770:CDS | 40.0% | |
| CAAGGAAAAACTGTCGGAAA+AGG | - | chr5_3:14285541-14285560 | Msa0800770:CDS | 40.0% | |
| AACTGTCGGAAAAGGTTATG+CGG | - | chr5_3:14285549-14285568 | Msa0800770:CDS | 40.0% | |
| GTGTCTCAATATCACTTCCT+CGG | + | chr5_3:14285576-14285595 | None:intergenic | 40.0% | |
| GCAATAAGCTTAGGATCAGA+TGG | + | chr5_3:14285613-14285632 | None:intergenic | 40.0% | |
| TGAGCAGACTGAATTTGAGT+TGG | + | chr5_3:14285680-14285699 | None:intergenic | 40.0% | |
| ACAAGATCATACGAAGGTGA+AGG | - | chr5_3:14285706-14285725 | Msa0800770:CDS | 40.0% | |
| AAGGATCTTACAAGGTTCCT+TGG | + | chr5_3:14285988-14286007 | None:intergenic | 40.0% | |
| GATGTTCCTGATCTTGATAC+AGG | + | chr5_3:14286018-14286037 | None:intergenic | 40.0% | |
| CCAACAGTTCTTATGAACGA+CGG | - | chr5_3:14286294-14286313 | Msa0800770:intron | 40.0% | |
| ! | GAAACGGAATGAGTAATGGA+GGG | + | chr5_3:14286349-14286368 | None:intergenic | 40.0% |
| TGAAACGGAATGAGTAATGG+AGG | + | chr5_3:14286350-14286369 | None:intergenic | 40.0% | |
| GGTTGAAACGGAATGAGTAA+TGG | + | chr5_3:14286353-14286372 | None:intergenic | 40.0% | |
| GAATTCTTCTGCAGAAGTGA+GGG | + | chr5_3:14286374-14286393 | None:intergenic | 40.0% | |
| ! | TCTTTAGGAGAACTACACTG+AGG | - | chr5_3:14286708-14286727 | Msa0800770:intron | 40.0% |
| ! | GCAGTGTTCATGAAGACTTT+TGG | - | chr5_3:14286758-14286777 | Msa0800770:intron | 40.0% |
| ! | GTGTTCATGAAGACTTTTGG+AGG | - | chr5_3:14286761-14286780 | Msa0800770:intron | 40.0% |
| !! | GACAAATCAGGAGTTGATAC+TGG | + | chr5_3:14286805-14286824 | None:intergenic | 40.0% |
| ! | CTGATGTCTCTGAAAACTTG+TGG | + | chr5_3:14286850-14286869 | None:intergenic | 40.0% |
| !! | TTGTTGATTTGGCAGAGCTA+AGG | - | chr5_3:14287061-14287080 | Msa0800770:five_prime_UTR | 40.0% |
| ACTTGATTCTAGTGATGTCG+AGG | - | chr5_3:14287098-14287117 | Msa0800770:intron | 40.0% | |
| AATCTAGACAGTGTCAAAGG+TGG | + | chr5_3:14287426-14287445 | None:intergenic | 40.0% | |
| CTGAATCTAGACAGTGTCAA+AGG | + | chr5_3:14287429-14287448 | None:intergenic | 40.0% | |
| TTCAACAGTTCCTTTCCTTG+AGG | + | chr5_3:14287486-14287505 | None:intergenic | 40.0% | |
| TAAAGAGACATATCCGGTGA+AGG | + | chr5_3:14287543-14287562 | None:intergenic | 40.0% | |
| TAGAACGGGCGTAATTCTAG+TGG | - | chr5_3:14283803-14283822 | Msa0800770:intron | 45.0% | |
| ! | CTTTTGGTAGACTGTATGGG+AGG | - | chr5_3:14283863-14283882 | Msa0800770:intron | 45.0% |
| CAATCAAGCAAAGGAGGGAA+GGG | + | chr5_3:14284135-14284154 | None:intergenic | 45.0% | |
| ACAATCAAGCAAAGGAGGGA+AGG | + | chr5_3:14284136-14284155 | None:intergenic | 45.0% | |
| GATGAGTTTCAAAGTCTGCG+TGG | + | chr5_3:14284194-14284213 | None:intergenic | 45.0% | |
| TTCAGCTAGGATTCGAACTC+AGG | + | chr5_3:14284356-14284375 | None:intergenic | 45.0% | |
| TATAAGAAGTCCTTCAGGGG+GGG | + | chr5_3:14284429-14284448 | None:intergenic | 45.0% | |
| GGGGATATAAGAAGTCCTTC+AGG | + | chr5_3:14284434-14284453 | None:intergenic | 45.0% | |
| AGAAAGATCCCTCAAGGTTG+TGG | - | chr5_3:14284513-14284532 | Msa0800770:intron | 45.0% | |
| GAAAGATCCCTCAAGGTTGT+GGG | - | chr5_3:14284514-14284533 | Msa0800770:intron | 45.0% | |
| GGAGAGTAGAGCACATGTAT+AGG | - | chr5_3:14284535-14284554 | Msa0800770:CDS | 45.0% | |
| GTAGAGCACATGTATAGGCT+TGG | - | chr5_3:14284540-14284559 | Msa0800770:CDS | 45.0% | |
| ! | CACATGTATAGGCTTGGTCT+TGG | - | chr5_3:14284546-14284565 | Msa0800770:CDS | 45.0% |
| GCAACAGGTTTAGTGTCTAC+AGG | + | chr5_3:14284908-14284927 | None:intergenic | 45.0% | |
| ! | AAAGATGACGGCGATGATGA+TGG | - | chr5_3:14285067-14285086 | Msa0800770:CDS | 45.0% |
| !!! | GCCAGAGTTTTGGAGAACAA+AGG | - | chr5_3:14285095-14285114 | Msa0800770:CDS | 45.0% |
| GCCTTTGTTCTCCAAAACTC+TGG | + | chr5_3:14285099-14285118 | None:intergenic | 45.0% | |
| !!! | GTTTTGGAGAACAAAGGCGT+CGG | - | chr5_3:14285101-14285120 | Msa0800770:CDS | 45.0% |
| !!! | TTTTGGAGAACAAAGGCGTC+GGG | - | chr5_3:14285102-14285121 | Msa0800770:CDS | 45.0% |
| !! | GCTAGAAACACTGCCGATTT+CGG | + | chr5_3:14285215-14285234 | None:intergenic | 45.0% |
| TAGATGCATCTTCTCCAACC+CGG | - | chr5_3:14285380-14285399 | Msa0800770:CDS | 45.0% | |
| TTCAAGATAACGATCCGGGT+TGG | + | chr5_3:14285397-14285416 | None:intergenic | 45.0% | |
| CGGATCGTTATCTTGAAACC+TGG | - | chr5_3:14285400-14285419 | Msa0800770:CDS | 45.0% | |
| AGTTCAACAGGGACTTTACC+AGG | - | chr5_3:14285460-14285479 | Msa0800770:CDS | 45.0% | |
| ! | CGTTTGAAATGCGAACTGCA+AGG | - | chr5_3:14285523-14285542 | Msa0800770:CDS | 45.0% |
| CTGATAAATTCGGGGACACT+TGG | + | chr5_3:14285745-14285764 | None:intergenic | 45.0% | |
| TTGGAGACAACAACTCTCTG+TGG | + | chr5_3:14285969-14285988 | None:intergenic | 45.0% | |
| ACAGAGAGTTGTTGTCTCCA+AGG | - | chr5_3:14285968-14285987 | Msa0800770:CDS | 45.0% | |
| GAGCAGACAAGGATCTTACA+AGG | + | chr5_3:14285996-14286015 | None:intergenic | 45.0% | |
| TCTTGATACAGGAGCAGACA+AGG | + | chr5_3:14286007-14286026 | None:intergenic | 45.0% | |
| TCTGCTCCTGTATCAAGATC+AGG | - | chr5_3:14286009-14286028 | Msa0800770:CDS | 45.0% | |
| GAAAGCTTCTACTAGAGGAC+CGG | - | chr5_3:14286043-14286062 | Msa0800770:CDS | 45.0% | |
| ! | TTTTAACCGGGGCTCATATC+CGG | - | chr5_3:14286070-14286089 | Msa0800770:CDS | 45.0% |
| !!! | ACAGTTTTGCTCTAAGAGGG+AGG | - | chr5_3:14286190-14286209 | Msa0800770:intron | 45.0% |
| !!! | GCTCTAAGAGGGAGGATTTT+TGG | - | chr5_3:14286198-14286217 | Msa0800770:intron | 45.0% |
| CCGTCGTTCATAAGAACTGT+TGG | + | chr5_3:14286297-14286316 | None:intergenic | 45.0% | |
| ACAGTTCTTATGAACGACGG+TGG | - | chr5_3:14286297-14286316 | Msa0800770:intron | 45.0% | |
| TGCAGAAGTGAGGGTTGAAA+CGG | + | chr5_3:14286365-14286384 | None:intergenic | 45.0% | |
| CGAATTCTTCTGCAGAAGTG+AGG | + | chr5_3:14286375-14286394 | None:intergenic | 45.0% | |
| TCGTCTCTTGAGGACAAATC+AGG | + | chr5_3:14286817-14286836 | None:intergenic | 45.0% | |
| ! | GTTTTCAGAGACATCAGCTC+TGG | - | chr5_3:14286853-14286872 | Msa0800770:intron | 45.0% |
| ! | GACATCAGCTCTGGTTTAAC+TGG | - | chr5_3:14286862-14286881 | Msa0800770:intron | 45.0% |
| ATTCAGACTCAGACGGTTTC+TGG | + | chr5_3:14287137-14287156 | None:intergenic | 45.0% | |
| GAAACCGTCTGAGTCTGAAT+TGG | - | chr5_3:14287137-14287156 | Msa0800770:intron | 45.0% | |
| TGCACCAATTCAGACTCAGA+CGG | + | chr5_3:14287144-14287163 | None:intergenic | 45.0% | |
| AACAGTTCCTTTCCTTGAGG+CGG | + | chr5_3:14287483-14287502 | None:intergenic | 45.0% | |
| TTGAGTTCAATCCCTTGGTC+TGG | - | chr5_3:14287591-14287610 | Msa0800770:intron | 45.0% | |
| TTCCATACATTGGTGGAGCA+AGG | - | chr5_3:14287746-14287765 | Msa0800770:five_prime_UTR | 45.0% | |
| TCCATACATTGGTGGAGCAA+GGG | - | chr5_3:14287747-14287766 | Msa0800770:five_prime_UTR | 45.0% | |
| TGTGTGAGTGTGTGTGATGT+AGG | - | chr5_3:14287870-14287889 | Msa0800770:five_prime_UTR | 45.0% | |
| GTGTGAGTGTGTGTGATGTA+GGG | - | chr5_3:14287871-14287890 | Msa0800770:five_prime_UTR | 45.0% | |
| TGTGAGTGTGTGTGATGTAG+GGG | - | chr5_3:14287872-14287891 | Msa0800770:five_prime_UTR | 45.0% | |
| !! | ATGTAGGGGGTATTGAGTTG+TGG | - | chr5_3:14287886-14287905 | Msa0800770:five_prime_UTR | 45.0% |
| GGAACAGGCTACGAGGTTAA+GGG | + | chr5_3:14282839-14282858 | None:intergenic | 50.0% | |
| AGGAACAGGCTACGAGGTTA+AGG | + | chr5_3:14282840-14282859 | None:intergenic | 50.0% | |
| ! | TCTCAGAAGTACGGTCCAGA+AGG | - | chr5_3:14284243-14284262 | Msa0800770:intron | 50.0% |
| ATAAGAAGTCCTTCAGGGGG+GGG | + | chr5_3:14284428-14284447 | None:intergenic | 50.0% | |
| CTACTCTCCCACAACCTTGA+GGG | + | chr5_3:14284524-14284543 | None:intergenic | 50.0% | |
| TCTACTCTCCCACAACCTTG+AGG | + | chr5_3:14284525-14284544 | None:intergenic | 50.0% | |
| CTGCCATGTGCTTGATCGAT+TGG | + | chr5_3:14284840-14284859 | None:intergenic | 50.0% | |
| !! | ATGACGGCGATGATGATGGA+TGG | - | chr5_3:14285071-14285090 | Msa0800770:CDS | 50.0% |
| ! | GATGGATGGAGCCAGAGTTT+TGG | - | chr5_3:14285085-14285104 | Msa0800770:CDS | 50.0% |
| TCGGGAACATCCACAGGAAA+TGG | - | chr5_3:14285120-14285139 | Msa0800770:CDS | 50.0% | |
| !! | GAGGACCGGCACATTTTAAC+CGG | - | chr5_3:14286057-14286076 | Msa0800770:CDS | 50.0% |
| !! | AGGACCGGCACATTTTAACC+GGG | - | chr5_3:14286058-14286077 | Msa0800770:CDS | 50.0% |
| TATCCGGAGGAAGCTTGAAG+CGG | - | chr5_3:14286086-14286105 | Msa0800770:CDS | 50.0% | |
| ACCCTTGCTCCACCAATGTA+TGG | + | chr5_3:14287751-14287770 | None:intergenic | 50.0% | |
| GTGAGTGTGTGTGATGTAGG+GGG | - | chr5_3:14287873-14287892 | Msa0800770:five_prime_UTR | 50.0% | |
| TGACAGAGGAACAGGCTACG+AGG | + | chr5_3:14282846-14282865 | None:intergenic | 55.0% | |
| GCAAAGGAGGGAAGGGAACA+GGG | + | chr5_3:14284128-14284147 | None:intergenic | 55.0% | |
| AGCAAAGGAGGGAAGGGAAC+AGG | + | chr5_3:14284129-14284148 | None:intergenic | 55.0% | |
| TAAGAAGTCCTTCAGGGGGG+GGG | + | chr5_3:14284427-14284446 | None:intergenic | 55.0% | |
| ATCAACCTCGCCACAAGGCT+TGG | + | chr5_3:14284869-14284888 | None:intergenic | 55.0% | |
| ! | AAGCCTTGTGGCGAGGTTGA+TGG | - | chr5_3:14284868-14284887 | Msa0800770:CDS | 55.0% |
| ! | AGCCTTGTGGCGAGGTTGAT+GGG | - | chr5_3:14284869-14284888 | Msa0800770:CDS | 55.0% |
| GGAAAAGGTTATGCGGTCCG+AGG | - | chr5_3:14285556-14285575 | Msa0800770:CDS | 55.0% | |
| !! | GGACCGGCACATTTTAACCG+GGG | - | chr5_3:14286059-14286078 | Msa0800770:CDS | 55.0% |
| GAGCCCCGGTTAAAATGTGC+CGG | + | chr5_3:14286065-14286084 | None:intergenic | 55.0% | |
| CAACCGCTTCAAGCTTCCTC+CGG | + | chr5_3:14286092-14286111 | None:intergenic | 55.0% | |
| CTGCACACAGATGCAGGACT+CGG | + | chr5_3:14286739-14286758 | None:intergenic | 55.0% | |
| ACACTGCTGCACACAGATGC+AGG | + | chr5_3:14286745-14286764 | None:intergenic | 55.0% | |
| CACAGCAGTCTCGTCTCTTG+AGG | + | chr5_3:14286827-14286846 | None:intergenic | 55.0% | |
| AAGAAGTCCTTCAGGGGGGG+GGG | + | chr5_3:14284426-14284445 | None:intergenic | 60.0% | |
| GCAGACTGCACCAAGCCTTG+TGG | - | chr5_3:14284856-14284875 | Msa0800770:CDS | 60.0% | |
| !! | GCCTTGTGGCGAGGTTGATG+GGG | - | chr5_3:14284870-14284889 | Msa0800770:CDS | 60.0% |
| ACCCCATCAACCTCGCCACA+AGG | + | chr5_3:14284874-14284893 | None:intergenic | 60.0% | |
| !! | AAGGCGTCGGGAACATCCAC+AGG | - | chr5_3:14285114-14285133 | Msa0800770:CDS | 60.0% |
| TAACCGGGGCTCATATCCGG+AGG | - | chr5_3:14286073-14286092 | Msa0800770:CDS | 60.0% | |
| CTTCCTCCGGATATGAGCCC+CGG | + | chr5_3:14286079-14286098 | None:intergenic | 60.0% | |
| CACACAGATGCAGGACTCGG+AGG | + | chr5_3:14286736-14286755 | None:intergenic | 60.0% | |
| TCCATGTTGTCGCCGCCTCA+AGG | - | chr5_3:14287468-14287487 | Msa0800770:intron | 60.0% | |
| TCCTTGAGGCGGCGACAACA+TGG | + | chr5_3:14287472-14287491 | None:intergenic | 60.0% | |
| GTTGTCGCCGCCTCAAGGAA+AGG | - | chr5_3:14287473-14287492 | Msa0800770:intron | 60.0% | |
| GGGGGGGGGGTAAAAGAAGG+AGG | + | chr5_3:14284412-14284431 | None:intergenic | 65.0% | |
| CAGGGGGGGGGGGTAAAAGA+AGG | + | chr5_3:14284415-14284434 | None:intergenic | 65.0% | |
| ! | CTTTTACCCCCCCCCCCTGA+AGG | - | chr5_3:14284416-14284435 | Msa0800770:intron | 65.0% |
| AGAAGTCCTTCAGGGGGGGG+GGG | + | chr5_3:14284425-14284444 | None:intergenic | 65.0% | |
| ! | CTGCACCAAGCCTTGTGGCG+AGG | - | chr5_3:14284861-14284880 | Msa0800770:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 14282778 | 14288081 | 14282778 | ID=Msa0800770;Name=Msa0800770 |
| chr5_3 | mRNA | 14282778 | 14288081 | 14282778 | ID=Msa0800770-mRNA-1;Parent=Msa0800770;Name=Msa0800770-mRNA-1;_AED=0.02;_eAED=0.02;_QI=455|0.8|0.83|1|0.8|0.66|6|374|852 |
| chr5_3 | exon | 14282778 | 14283783 | 14282778 | ID=Msa0800770-mRNA-1:exon:6000;Parent=Msa0800770-mRNA-1 |
| chr5_3 | exon | 14283976 | 14284144 | 14283976 | ID=Msa0800770-mRNA-1:exon:5999;Parent=Msa0800770-mRNA-1 |
| chr5_3 | exon | 14284530 | 14286128 | 14284530 | ID=Msa0800770-mRNA-1:exon:5998;Parent=Msa0800770-mRNA-1 |
| chr5_3 | exon | 14286584 | 14286660 | 14286584 | ID=Msa0800770-mRNA-1:exon:5997;Parent=Msa0800770-mRNA-1 |
| chr5_3 | exon | 14286900 | 14287086 | 14286900 | ID=Msa0800770-mRNA-1:exon:5996;Parent=Msa0800770-mRNA-1 |
| chr5_3 | exon | 14287732 | 14288081 | 14287732 | ID=Msa0800770-mRNA-1:exon:5995;Parent=Msa0800770-mRNA-1 |
| chr5_3 | five_prime_UTR | 14287732 | 14288081 | 14287732 | ID=Msa0800770-mRNA-1:five_prime_utr;Parent=Msa0800770-mRNA-1 |
| chr5_3 | five_prime_UTR | 14286982 | 14287086 | 14286982 | ID=Msa0800770-mRNA-1:five_prime_utr;Parent=Msa0800770-mRNA-1 |
| chr5_3 | CDS | 14286900 | 14286981 | 14286900 | ID=Msa0800770-mRNA-1:cds;Parent=Msa0800770-mRNA-1 |
| chr5_3 | CDS | 14286584 | 14286660 | 14286584 | ID=Msa0800770-mRNA-1:cds;Parent=Msa0800770-mRNA-1 |
| chr5_3 | CDS | 14284530 | 14286128 | 14284530 | ID=Msa0800770-mRNA-1:cds;Parent=Msa0800770-mRNA-1 |
| chr5_3 | CDS | 14283976 | 14284144 | 14283976 | ID=Msa0800770-mRNA-1:cds;Parent=Msa0800770-mRNA-1 |
| chr5_3 | CDS | 14283152 | 14283783 | 14283152 | ID=Msa0800770-mRNA-1:cds;Parent=Msa0800770-mRNA-1 |
| chr5_3 | three_prime_UTR | 14282778 | 14283151 | 14282778 | ID=Msa0800770-mRNA-1:three_prime_utr;Parent=Msa0800770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
