Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97314.t1 | XP_024627203.1 | 97.2 | 758 | 14 | 3 | 1 | 756 | 1 | 753 | 0.00E+00 | 1151.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97314.t1 | Q8LGU6 | 65.9 | 762 | 234 | 8 | 1 | 755 | 1 | 743 | 1.6e-217 | 757.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97314.t1 | A0A396H0H1 | 97.2 | 758 | 14 | 3 | 1 | 756 | 1 | 753 | 0.0e+00 | 1151.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97314.t1 | MTR_7g019230 | 96.983 | 696 | 14 | 3 | 63 | 756 | 1 | 691 | 0.0 | 1396 |
| MS.gene97314.t1 | MTR_7g019230 | 96.921 | 682 | 14 | 3 | 77 | 756 | 1 | 677 | 0.0 | 1367 |
| MS.gene97314.t1 | MTR_6g016680 | 76.963 | 764 | 159 | 7 | 1 | 756 | 1 | 755 | 0.0 | 1195 |
| MS.gene97314.t1 | MTR_6g016745 | 77.778 | 72 | 16 | 0 | 645 | 716 | 21 | 92 | 6.35e-29 | 111 |
| MS.gene97314.t1 | MTR_1g103750 | 29.221 | 308 | 200 | 5 | 437 | 728 | 240 | 545 | 2.20e-27 | 118 |
| MS.gene97314.t1 | MTR_8g021140 | 27.055 | 292 | 203 | 3 | 447 | 728 | 255 | 546 | 6.53e-26 | 113 |
| MS.gene97314.t1 | MTR_6g033355 | 50.000 | 108 | 31 | 3 | 198 | 301 | 206 | 294 | 1.87e-22 | 99.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97314.t1 | AT2G20000 | 70.735 | 762 | 197 | 8 | 1 | 755 | 1 | 743 | 0.0 | 1105 |
| MS.gene97314.t1 | AT2G20000 | 69.372 | 653 | 174 | 8 | 1 | 646 | 1 | 634 | 0.0 | 921 |
| MS.gene97314.t1 | AT3G16320 | 48.375 | 769 | 342 | 13 | 1 | 756 | 2 | 728 | 0.0 | 663 |
| MS.gene97314.t1 | AT3G16320 | 47.854 | 769 | 335 | 13 | 1 | 756 | 2 | 717 | 0.0 | 652 |
| MS.gene97314.t1 | AT3G16320 | 45.128 | 585 | 268 | 12 | 1 | 574 | 2 | 544 | 2.12e-144 | 435 |
| MS.gene97314.t1 | AT3G16320 | 43.993 | 591 | 255 | 14 | 1 | 574 | 2 | 533 | 7.25e-141 | 425 |
| MS.gene97314.t1 | AT3G48150 | 31.200 | 250 | 165 | 3 | 447 | 691 | 255 | 502 | 7.98e-27 | 116 |
| MS.gene97314.t1 | AT3G48150 | 31.200 | 250 | 165 | 3 | 447 | 691 | 142 | 389 | 1.48e-26 | 114 |
Find 164 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGATGACACCTTATAATT+TGG | 0.186632 | 7.3:+78779784 | MS.gene97314:CDS |
| GGTAATGGAGAAGGCTATTT+TGG | 0.199079 | 7.3:+78782693 | MS.gene97314:CDS |
| ATCTATTAGGGCTCATTTAC+AGG | 0.203393 | 7.3:+78774251 | MS.gene97314:CDS |
| CAGATGACTGTGGATTAATT+TGG | 0.222722 | 7.3:-78782506 | None:intergenic |
| TTGGAGAGGTTGAGCAATTT+AGG | 0.226200 | 7.3:-78775544 | None:intergenic |
| CCGGAGACAACTGTTGAATT+AGG | 0.231233 | 7.3:-78777018 | None:intergenic |
| TTTGGAAAGCCATTTGAAAA+TGG | 0.248171 | 7.3:-78782488 | None:intergenic |
| CTGACCCTTCTAAGAGTTCT+TGG | 0.248978 | 7.3:+78778560 | MS.gene97314:CDS |
| TCAGCTGGTCATTATCTATT+AGG | 0.252176 | 7.3:+78774238 | MS.gene97314:CDS |
| TCCATTCCTTCCAAATTATA+AGG | 0.254107 | 7.3:-78779794 | None:intergenic |
| TTCCAAGCTCATTAGTATAT+TGG | 0.257005 | 7.3:-78782752 | None:intergenic |
| TACTGCTTTGCACGCTTTAA+AGG | 0.265614 | 7.3:+78782548 | MS.gene97314:CDS |
| TATGAAGAGTTGTGCATATT+AGG | 0.273818 | 7.3:+78774590 | MS.gene97314:CDS |
| AGAGTAACTAGTTCCATTTC+CGG | 0.285068 | 7.3:-78777037 | None:intergenic |
| TTAGAAGCTGATCGGGCTTT+TGG | 0.286826 | 7.3:+78779752 | MS.gene97314:CDS |
| CCTGTATTGGGAGGAACTTC+TGG | 0.291001 | 7.3:+78775695 | MS.gene97314:CDS |
| CAAGGCCTAAAAGATATTTC+TGG | 0.295547 | 7.3:+78775656 | MS.gene97314:CDS |
| GCGACATACCCTTTAAAATA+TGG | 0.305456 | 7.3:-78773532 | None:intergenic |
| AACAGATGCTGCTGCTATTA+AGG | 0.305543 | 7.3:+78782933 | MS.gene97314:CDS |
| CGAATTACTTGTGTCATCAT+TGG | 0.310552 | 7.3:-78775770 | None:intergenic |
| CAGCTGGTCATTATCTATTA+GGG | 0.326959 | 7.3:+78774239 | MS.gene97314:CDS |
| TTGCATGAGTTTCGATTGCC+TGG | 0.329090 | 7.3:-78775636 | None:intergenic |
| TCATATGCAGCCCACATTAG+AGG | 0.335098 | 7.3:-78774572 | None:intergenic |
| TTAGACTTGCCTGCTTGTAT+AGG | 0.337608 | 7.3:+78778591 | MS.gene97314:CDS |
| TTAGAACCTCGGAGGGGAAT+TGG | 0.339583 | 7.3:-78771808 | None:intergenic |
| TTAGAAAGACCACTATTAAT+AGG | 0.357198 | 7.3:-78775722 | None:intergenic |
| GGTGTGCGCATATGCAAATC+TGG | 0.358538 | 7.3:-78781904 | None:intergenic |
| TCAACAGTTGTCTCCGGAAA+TGG | 0.367838 | 7.3:+78777024 | MS.gene97314:CDS |
| CTTCACCAAGAACTCTTAGA+AGG | 0.369169 | 7.3:-78778565 | None:intergenic |
| TGATGGGAAGGATCTATAAA+AGG | 0.374031 | 7.3:+78782848 | MS.gene97314:CDS |
| GCCTTCTGATACATTGGAAC+AGG | 0.378578 | 7.3:-78782730 | None:intergenic |
| GCTTCATTATGGTATTGCTT+TGG | 0.386469 | 7.3:+78782894 | MS.gene97314:CDS |
| CCATTTGGCTGCACATTCCT+AGG | 0.390062 | 7.3:-78776041 | None:intergenic |
| CGGTACATGTAATTTCTCTA+TGG | 0.394990 | 7.3:-78783148 | None:intergenic |
| TGCTCTGGCAGGTGCGCAAT+GGG | 0.396026 | 7.3:+78781810 | MS.gene97314:intron |
| CAGTTTCATGATCTTTCTGC+AGG | 0.397634 | 7.3:-78781845 | None:intergenic |
| GCATATGCGCACACCCTTTG+TGG | 0.397835 | 7.3:+78781912 | MS.gene97314:CDS |
| ACCTTATAATTTGGAAGGAA+TGG | 0.398899 | 7.3:+78779793 | MS.gene97314:CDS |
| TAGAACCTCGGAGGGGAATT+GGG | 0.402746 | 7.3:-78771807 | None:intergenic |
| GAGAGAGCAATGCTTCATTA+TGG | 0.405070 | 7.3:+78782883 | MS.gene97314:CDS |
| AATTAGTGTCTATGCTTTGA+TGG | 0.410531 | 7.3:+78782831 | MS.gene97314:CDS |
| CAGAGAACTCAAACTTCTCT+TGG | 0.411395 | 7.3:-78782461 | None:intergenic |
| GTGCTCATATTTGAGCCATT+TGG | 0.412116 | 7.3:-78776056 | None:intergenic |
| CATCATGGAGCACCTGTATT+GGG | 0.414054 | 7.3:+78775683 | MS.gene97314:CDS |
| TCATCATGGAGCACCTGTAT+TGG | 0.416929 | 7.3:+78775682 | MS.gene97314:CDS |
| CGAGGAAGCACTGGTGGTAA+TGG | 0.420022 | 7.3:+78782678 | MS.gene97314:CDS |
| ATATTGGCCTTCTGATACAT+TGG | 0.424592 | 7.3:-78782736 | None:intergenic |
| TACTCTTCTAAGCATCTTGG+TGG | 0.427824 | 7.3:+78777054 | MS.gene97314:CDS |
| CTTAATACTTGTCCACCAAC+TGG | 0.429758 | 7.3:-78778503 | None:intergenic |
| TGATTATTTAGAAGCTGATC+GGG | 0.430234 | 7.3:+78779745 | MS.gene97314:CDS |
| AGTAACAGCCAGCCAACAAT+TGG | 0.431456 | 7.3:-78773481 | None:intergenic |
| TACAATGCTTGGTATGGACT+TGG | 0.432768 | 7.3:+78782423 | MS.gene97314:CDS |
| ATCTTTGGTGTAGCATCTAA+AGG | 0.436385 | 7.3:+78781128 | MS.gene97314:intron |
| GGAAGCTAAATCTTATGAAC+AGG | 0.440977 | 7.3:+78778466 | MS.gene97314:CDS |
| GGAAGATGGCGTTGGAGTGA+AGG | 0.441123 | 7.3:-78771766 | None:intergenic |
| TCAGTTGATGAATGCAACTT+TGG | 0.442023 | 7.3:-78775563 | None:intergenic |
| ACAGACAAATCTCCAATTGT+TGG | 0.442641 | 7.3:+78773469 | MS.gene97314:intron |
| CACTGGCTGGGTTCTTTCCC+AGG | 0.450596 | 7.3:+78778827 | MS.gene97314:CDS |
| TTCATAAGATTTAGCTTCCA+TGG | 0.457915 | 7.3:-78778462 | None:intergenic |
| GGCCAATATACTAATGAGCT+TGG | 0.459336 | 7.3:+78782750 | MS.gene97314:CDS |
| AGCCCCTCGAAGAAAGTTTG+TGG | 0.460066 | 7.3:+78776127 | MS.gene97314:CDS |
| ATTGATTGAAGGAACACAAA+TGG | 0.464378 | 7.3:+78773741 | MS.gene97314:intron |
| TGCCTGCTTGTATAGGTGCC+AGG | 0.469710 | 7.3:+78778598 | MS.gene97314:CDS |
| CGAAGAAAGTTTGTGGATGA+AGG | 0.470173 | 7.3:+78776134 | MS.gene97314:CDS |
| ATGAAAGGCATTACAATGCT+TGG | 0.470224 | 7.3:+78782412 | MS.gene97314:CDS |
| CATCCACAAACTTTCTTCGA+GGG | 0.471086 | 7.3:-78776130 | None:intergenic |
| TAATGACCAGCTGAACCGTT+TGG | 0.472627 | 7.3:-78774229 | None:intergenic |
| CGACGTAGTTCGAGACTCTC+AGG | 0.477112 | 7.3:+78776973 | MS.gene97314:CDS |
| CCAGAAGTTCCTCCCAATAC+AGG | 0.479498 | 7.3:-78775695 | None:intergenic |
| TCATCCACAAACTTTCTTCG+AGG | 0.481966 | 7.3:-78776131 | None:intergenic |
| AGTTACTCTTCTAAGCATCT+TGG | 0.485119 | 7.3:+78777051 | MS.gene97314:CDS |
| ATCAACAAGTATTGCTTCCA+TGG | 0.488395 | 7.3:-78771717 | None:intergenic |
| ATTGTTGGTACAGGATGCAC+TGG | 0.491702 | 7.3:+78778770 | MS.gene97314:intron |
| CCTAGGAATGTGCAGCCAAA+TGG | 0.496714 | 7.3:+78776041 | MS.gene97314:CDS |
| GATATTTCTGGAAATCATCA+TGG | 0.501072 | 7.3:+78775668 | MS.gene97314:CDS |
| TTGATTATTTAGAAGCTGAT+CGG | 0.502990 | 7.3:+78779744 | MS.gene97314:CDS |
| ATAAGCATTACAACACTGGC+TGG | 0.503811 | 7.3:+78778814 | MS.gene97314:CDS |
| TAGGTTCCAAACGGTTCAGC+TGG | 0.504233 | 7.3:+78774223 | MS.gene97314:intron |
| TCAGCACTAGGCTCATTAGT+AGG | 0.504539 | 7.3:-78773838 | None:intergenic |
| TTCATACTCGTGTCCACAAA+GGG | 0.504852 | 7.3:-78781925 | None:intergenic |
| TCGTTCTGCGACAGTTCGCA+AGG | 0.506445 | 7.3:+78777101 | MS.gene97314:CDS |
| GAAGTTAAGTTACCTGGCTC+AGG | 0.510526 | 7.3:+78781158 | MS.gene97314:CDS |
| CATAGAGAAATTACATGTAC+CGG | 0.511603 | 7.3:+78783149 | MS.gene97314:CDS |
| ATAGAAGCCTACCATGATTG+AGG | 0.511818 | 7.3:-78781207 | None:intergenic |
| TGGCGTTGGAGTGAAGGAAA+TGG | 0.512991 | 7.3:-78771760 | None:intergenic |
| AGCATAGACACTAATTTCGC+GGG | 0.514057 | 7.3:-78782824 | None:intergenic |
| TTTGTATCAGTTCCTGAGCC+AGG | 0.515853 | 7.3:-78781170 | None:intergenic |
| CCTAATTCAACAGTTGTCTC+CGG | 0.517176 | 7.3:+78777018 | MS.gene97314:CDS |
| ATCGCTTAGCTCCTCAATCA+TGG | 0.519628 | 7.3:+78781196 | MS.gene97314:CDS |
| TCTGGTCATCCTATTAATAG+TGG | 0.520693 | 7.3:+78775713 | MS.gene97314:CDS |
| ATGCTCTGGCAGGTGCGCAA+TGG | 0.521080 | 7.3:+78781809 | MS.gene97314:intron |
| ACAGAGAAGCGAGGAAGCAC+TGG | 0.523629 | 7.3:+78782669 | MS.gene97314:intron |
| ACTTGTGTCATCATTGGAGC+CGG | 0.524294 | 7.3:-78775764 | None:intergenic |
| GTAGAGTTCACTGTTGACCT+TGG | 0.524448 | 7.3:-78776098 | None:intergenic |
| AGGCATTACAATGCTTGGTA+TGG | 0.525641 | 7.3:+78782417 | MS.gene97314:CDS |
| ACAAATCTCCAATTGTTGGC+TGG | 0.526349 | 7.3:+78773473 | MS.gene97314:CDS |
| GTGTCTATGCTTTGATGGGA+AGG | 0.528915 | 7.3:+78782836 | MS.gene97314:CDS |
| TGTCAGAAGATGCGAGTCCC+AGG | 0.529380 | 7.3:+78775618 | MS.gene97314:CDS |
| ACAGTGCCATCTTAAAATGA+TGG | 0.530855 | 7.3:-78774541 | None:intergenic |
| AAGTTGTCGTCCATCTCATC+CGG | 0.539528 | 7.3:-78783168 | None:intergenic |
| TGCATGAGTTTCGATTGCCT+GGG | 0.540005 | 7.3:-78775635 | None:intergenic |
| ATTAGTGTCTATGCTTTGAT+GGG | 0.540532 | 7.3:+78782832 | MS.gene97314:CDS |
| GAGACGATGAGAGAGGAAGA+TGG | 0.540981 | 7.3:-78771780 | None:intergenic |
| CATCAACCCTGAGTGCACTC+TGG | 0.549425 | 7.3:-78782392 | None:intergenic |
| GCCAATGAAAACATAGATGA+AGG | 0.550686 | 7.3:+78777135 | MS.gene97314:CDS |
| TCTGTTATATTGTCATACCT+TGG | 0.550817 | 7.3:+78782525 | MS.gene97314:CDS |
| GCAGCAAATATTCCAGTTGG+TGG | 0.553065 | 7.3:+78778491 | MS.gene97314:CDS |
| CATACTCTTTAAGCTCCTCT+AGG | 0.553295 | 7.3:-78782798 | None:intergenic |
| ATTACATGTACCGGATGAGA+TGG | 0.553660 | 7.3:+78783158 | MS.gene97314:CDS |
| AGTTCGCAAGGGACAACCAT+GGG | 0.555322 | 7.3:+78777113 | MS.gene97314:CDS |
| ATGAGAGAGGAAGATGGCGT+TGG | 0.555862 | 7.3:-78771774 | None:intergenic |
| ATGACACCTTATAATTTGGA+AGG | 0.560199 | 7.3:+78779788 | MS.gene97314:CDS |
| TCCTGTTCCAATGTATCAGA+AGG | 0.566463 | 7.3:+78782729 | MS.gene97314:CDS |
| CCAGTGTTGTAATGCTTATG+TGG | 0.568677 | 7.3:-78778810 | None:intergenic |
| GGATGAAGGAAAGTTAAGAA+AGG | 0.569987 | 7.3:+78776148 | MS.gene97314:CDS |
| TGTCAATGGATCCTCTAATG+TGG | 0.571193 | 7.3:+78774561 | MS.gene97314:CDS |
| GTGCACTCAGGGTTGATGAA+AGG | 0.572223 | 7.3:+78782397 | MS.gene97314:CDS |
| GAACACAAATGGCTCAATCT+CGG | 0.572722 | 7.3:+78773752 | MS.gene97314:CDS |
| AATGCTACCAGAGTGCACTC+AGG | 0.574950 | 7.3:+78782385 | MS.gene97314:CDS |
| AAGCATAGACACTAATTTCG+CGG | 0.575041 | 7.3:-78782825 | None:intergenic |
| GGTCAGTATTTCAGAAGCAC+CGG | 0.577342 | 7.3:-78778543 | None:intergenic |
| ACTGTCGCAGAACGAAATGC+TGG | 0.578179 | 7.3:-78777093 | None:intergenic |
| AGCACTGGTGGTAATGGAGA+AGG | 0.587557 | 7.3:+78782684 | MS.gene97314:CDS |
| AGATATGAAGTTAAGTTACC+TGG | 0.588069 | 7.3:+78781152 | MS.gene97314:CDS |
| GCAGCAGCATCTGTTGCAGA+AGG | 0.591255 | 7.3:-78782925 | None:intergenic |
| ATCCACAAACTTTCTTCGAG+GGG | 0.593768 | 7.3:-78776129 | None:intergenic |
| ATGCTACCAGAGTGCACTCA+GGG | 0.593808 | 7.3:+78782386 | MS.gene97314:CDS |
| GTCAATGGATCCTCTAATGT+GGG | 0.594979 | 7.3:+78774562 | MS.gene97314:CDS |
| GTGTGCGCATATGCAAATCT+GGG | 0.597112 | 7.3:-78781903 | None:intergenic |
| CTTAACGTGTAGGTTCCAAA+CGG | 0.599221 | 7.3:+78774214 | MS.gene97314:intron |
| CGTTCTGCGACAGTTCGCAA+GGG | 0.600447 | 7.3:+78777102 | MS.gene97314:CDS |
| TTCTACTTCCTCGTCTACCA+TGG | 0.607177 | 7.3:+78778445 | MS.gene97314:CDS |
| TTCACCAAGAACTCTTAGAA+GGG | 0.608579 | 7.3:-78778564 | None:intergenic |
| TGCCATCTTAAAATGATGGA+CGG | 0.609130 | 7.3:-78774537 | None:intergenic |
| TACCTGGCACCTATACAAGC+AGG | 0.609714 | 7.3:-78778600 | None:intergenic |
| GTTCATACTCGTGTCCACAA+AGG | 0.614564 | 7.3:-78781926 | None:intergenic |
| CCACATAAGCATTACAACAC+TGG | 0.615459 | 7.3:+78778810 | MS.gene97314:CDS |
| TATGCTTGTACCTCAGCACT+AGG | 0.619300 | 7.3:-78773850 | None:intergenic |
| GAAGCAGCAAATATTCCAGT+TGG | 0.621965 | 7.3:+78778488 | MS.gene97314:CDS |
| GGGCGCAGAGACGATGAGAG+AGG | 0.623934 | 7.3:-78771787 | None:intergenic |
| TACTAATGAGCCTAGTGCTG+AGG | 0.626270 | 7.3:+78773840 | MS.gene97314:CDS |
| AGTAGCTCAAAAGTCATCAC+CGG | 0.628897 | 7.3:+78778524 | MS.gene97314:CDS |
| ACTCTTCTAAGCATCTTGGT+GGG | 0.631595 | 7.3:+78777055 | MS.gene97314:CDS |
| TTTGGCTGCACATTCCTAGG+TGG | 0.639023 | 7.3:-78776038 | None:intergenic |
| TAAGCATTACAACACTGGCT+GGG | 0.643024 | 7.3:+78778815 | MS.gene97314:CDS |
| CATGGAGCACCTGTATTGGG+AGG | 0.646393 | 7.3:+78775686 | MS.gene97314:CDS |
| TGCTTGGTATGGACTTGGAA+TGG | 0.647273 | 7.3:+78782428 | MS.gene97314:CDS |
| AAAGTTGCATTCATCAACTG+AGG | 0.647738 | 7.3:+78775565 | MS.gene97314:CDS |
| ACTCAAACTTCTCTTGGCGA+AGG | 0.648068 | 7.3:-78782455 | None:intergenic |
| GAGAAGCGAGGAAGCACTGG+TGG | 0.648358 | 7.3:+78782672 | MS.gene97314:intron |
| AAATCTGGGATTCAGTTGCA+CGG | 0.652100 | 7.3:-78781889 | None:intergenic |
| CTGCGCCCAATTCCCCTCCG+AGG | 0.652599 | 7.3:+78771802 | MS.gene97314:CDS |
| TTTAGCTTCCATGGTAGACG+AGG | 0.652731 | 7.3:-78778453 | None:intergenic |
| AGGCAATCGAAACTCATGCA+AGG | 0.653042 | 7.3:+78775638 | MS.gene97314:CDS |
| CAGTTCGCAAGGGACAACCA+TGG | 0.653979 | 7.3:+78777112 | MS.gene97314:CDS |
| TGATGAATGCAACTTTGGAG+AGG | 0.666230 | 7.3:-78775558 | None:intergenic |
| TATCAGCTGTTGCTCCACCT+AGG | 0.666789 | 7.3:+78776024 | MS.gene97314:CDS |
| TGAGGCTTTGGAAGTCCTAG+AGG | 0.679401 | 7.3:+78782783 | MS.gene97314:CDS |
| CATAATCTAACAGAGAAGCG+AGG | 0.682656 | 7.3:+78782660 | MS.gene97314:intron |
| AAGCGTGCAAAGCAGTACCA+AGG | 0.695747 | 7.3:-78782542 | None:intergenic |
| GACAATATAACAGATGACTG+TGG | 0.698069 | 7.3:-78782516 | None:intergenic |
| GCATAGACACTAATTTCGCG+GGG | 0.699602 | 7.3:-78782823 | None:intergenic |
| AAAGTGCTGAGAATTCTCCA+AGG | 0.711777 | 7.3:+78776081 | MS.gene97314:CDS |
| GAGAGTCTCGAACTACGTCG+AGG | 0.721990 | 7.3:-78776970 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 78771719 | 78783194 | 78771719 | ID=MS.gene97314 |
| chr7.3 | mRNA | 78771719 | 78783194 | 78771719 | ID=MS.gene97314.t1;Parent=MS.gene97314 |
| chr7.3 | exon | 78771719 | 78771823 | 78771719 | ID=MS.gene97314.t1.exon1;Parent=MS.gene97314.t1 |
| chr7.3 | CDS | 78771719 | 78771823 | 78771719 | ID=cds.MS.gene97314.t1;Parent=MS.gene97314.t1 |
| chr7.3 | exon | 78773473 | 78773545 | 78773473 | ID=MS.gene97314.t1.exon2;Parent=MS.gene97314.t1 |
| chr7.3 | CDS | 78773473 | 78773545 | 78773473 | ID=cds.MS.gene97314.t1;Parent=MS.gene97314.t1 |
| chr7.3 | exon | 78773752 | 78773861 | 78773752 | ID=MS.gene97314.t1.exon3;Parent=MS.gene97314.t1 |
| chr7.3 | CDS | 78773752 | 78773861 | 78773752 | ID=cds.MS.gene97314.t1;Parent=MS.gene97314.t1 |
| chr7.3 | exon | 78774226 | 78774272 | 78774226 | ID=MS.gene97314.t1.exon4;Parent=MS.gene97314.t1 |
| chr7.3 | CDS | 78774226 | 78774272 | 78774226 | ID=cds.MS.gene97314.t1;Parent=MS.gene97314.t1 |
| chr7.3 | exon | 78774514 | 78774611 | 78774514 | ID=MS.gene97314.t1.exon5;Parent=MS.gene97314.t1 |
| chr7.3 | CDS | 78774514 | 78774611 | 78774514 | ID=cds.MS.gene97314.t1;Parent=MS.gene97314.t1 |
| chr7.3 | exon | 78775480 | 78775784 | 78775480 | ID=MS.gene97314.t1.exon6;Parent=MS.gene97314.t1 |
| chr7.3 | CDS | 78775480 | 78775784 | 78775480 | ID=cds.MS.gene97314.t1;Parent=MS.gene97314.t1 |
| chr7.3 | exon | 78776023 | 78776169 | 78776023 | ID=MS.gene97314.t1.exon7;Parent=MS.gene97314.t1 |
| chr7.3 | CDS | 78776023 | 78776169 | 78776023 | ID=cds.MS.gene97314.t1;Parent=MS.gene97314.t1 |
| chr7.3 | exon | 78776931 | 78777156 | 78776931 | ID=MS.gene97314.t1.exon8;Parent=MS.gene97314.t1 |
| chr7.3 | CDS | 78776931 | 78777156 | 78776931 | ID=cds.MS.gene97314.t1;Parent=MS.gene97314.t1 |
| chr7.3 | exon | 78778393 | 78778619 | 78778393 | ID=MS.gene97314.t1.exon9;Parent=MS.gene97314.t1 |
| chr7.3 | CDS | 78778393 | 78778619 | 78778393 | ID=cds.MS.gene97314.t1;Parent=MS.gene97314.t1 |
| chr7.3 | exon | 78778783 | 78778848 | 78778783 | ID=MS.gene97314.t1.exon10;Parent=MS.gene97314.t1 |
| chr7.3 | CDS | 78778783 | 78778848 | 78778783 | ID=cds.MS.gene97314.t1;Parent=MS.gene97314.t1 |
| chr7.3 | exon | 78779722 | 78779838 | 78779722 | ID=MS.gene97314.t1.exon11;Parent=MS.gene97314.t1 |
| chr7.3 | CDS | 78779722 | 78779838 | 78779722 | ID=cds.MS.gene97314.t1;Parent=MS.gene97314.t1 |
| chr7.3 | exon | 78781141 | 78781217 | 78781141 | ID=MS.gene97314.t1.exon12;Parent=MS.gene97314.t1 |
| chr7.3 | CDS | 78781141 | 78781217 | 78781141 | ID=cds.MS.gene97314.t1;Parent=MS.gene97314.t1 |
| chr7.3 | exon | 78781821 | 78781940 | 78781821 | ID=MS.gene97314.t1.exon13;Parent=MS.gene97314.t1 |
| chr7.3 | CDS | 78781821 | 78781940 | 78781821 | ID=cds.MS.gene97314.t1;Parent=MS.gene97314.t1 |
| chr7.3 | exon | 78782350 | 78782569 | 78782350 | ID=MS.gene97314.t1.exon14;Parent=MS.gene97314.t1 |
| chr7.3 | CDS | 78782350 | 78782569 | 78782350 | ID=cds.MS.gene97314.t1;Parent=MS.gene97314.t1 |
| chr7.3 | exon | 78782673 | 78782954 | 78782673 | ID=MS.gene97314.t1.exon15;Parent=MS.gene97314.t1 |
| chr7.3 | CDS | 78782673 | 78782954 | 78782673 | ID=cds.MS.gene97314.t1;Parent=MS.gene97314.t1 |
| chr7.3 | exon | 78783144 | 78783194 | 78783144 | ID=MS.gene97314.t1.exon16;Parent=MS.gene97314.t1 |
| chr7.3 | CDS | 78783144 | 78783194 | 78783144 | ID=cds.MS.gene97314.t1;Parent=MS.gene97314.t1 |
| Gene Sequence |
| Protein sequence |
