Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95446.t1 | XP_024627203.1 | 97.1 | 758 | 15 | 3 | 1 | 756 | 1 | 753 | 0.00E+00 | 1151 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95446.t1 | Q8LGU6 | 65.9 | 762 | 234 | 8 | 1 | 755 | 1 | 743 | 7.4e-218 | 758.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95446.t1 | A0A396H0H1 | 97.1 | 758 | 15 | 3 | 1 | 756 | 1 | 753 | 0.0e+00 | 1151.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95446.t1 | MTR_7g019230 | 96.691 | 695 | 16 | 3 | 64 | 756 | 2 | 691 | 0.0 | 1391 |
| MS.gene95446.t1 | MTR_7g019230 | 96.628 | 682 | 16 | 3 | 77 | 756 | 1 | 677 | 0.0 | 1363 |
| MS.gene95446.t1 | MTR_6g016680 | 77.094 | 764 | 158 | 7 | 1 | 756 | 1 | 755 | 0.0 | 1194 |
| MS.gene95446.t1 | MTR_6g016745 | 76.389 | 72 | 17 | 0 | 645 | 716 | 21 | 92 | 2.45e-28 | 110 |
| MS.gene95446.t1 | MTR_1g103750 | 28.912 | 294 | 195 | 4 | 447 | 728 | 254 | 545 | 8.28e-27 | 116 |
| MS.gene95446.t1 | MTR_8g021140 | 27.055 | 292 | 203 | 3 | 447 | 728 | 255 | 546 | 7.73e-26 | 113 |
| MS.gene95446.t1 | MTR_6g033355 | 50.000 | 108 | 31 | 3 | 198 | 301 | 206 | 294 | 2.09e-22 | 99.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95446.t1 | AT2G20000 | 70.735 | 762 | 197 | 8 | 1 | 755 | 1 | 743 | 0.0 | 1103 |
| MS.gene95446.t1 | AT2G20000 | 69.372 | 653 | 174 | 8 | 1 | 646 | 1 | 634 | 0.0 | 919 |
| MS.gene95446.t1 | AT3G16320 | 48.505 | 769 | 341 | 13 | 1 | 756 | 2 | 728 | 0.0 | 661 |
| MS.gene95446.t1 | AT3G16320 | 47.613 | 775 | 328 | 15 | 1 | 756 | 2 | 717 | 0.0 | 652 |
| MS.gene95446.t1 | AT3G16320 | 44.759 | 601 | 272 | 13 | 1 | 590 | 2 | 553 | 1.60e-145 | 437 |
| MS.gene95446.t1 | AT3G16320 | 43.657 | 607 | 259 | 15 | 1 | 590 | 2 | 542 | 1.12e-142 | 430 |
| MS.gene95446.t1 | AT3G48150 | 31.200 | 250 | 165 | 3 | 447 | 691 | 255 | 502 | 1.10e-26 | 115 |
| MS.gene95446.t1 | AT3G48150 | 31.200 | 250 | 165 | 3 | 447 | 691 | 142 | 389 | 2.16e-26 | 114 |
Find 162 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGATGACACCTTATAATT+TGG | 0.186632 | 7.4:+80825033 | MS.gene95446:CDS |
| ATCTATTAGGGCTCATTTAC+AGG | 0.203393 | 7.4:+80819252 | MS.gene95446:CDS |
| GGTAATGGAGAAGGCTATTT+TGG | 0.218873 | 7.4:+80827997 | MS.gene95446:CDS |
| CAGATGACTGTGGATTAATT+TGG | 0.222722 | 7.4:-80827810 | None:intergenic |
| TTGGAGAGGTTGAGCAATTT+AGG | 0.226200 | 7.4:-80820533 | None:intergenic |
| CCAGAGACAACTGTTGAATT+AGG | 0.231233 | 7.4:-80822068 | None:intergenic |
| CTGACCCTTCTAAGAGTTCT+TGG | 0.248978 | 7.4:+80823810 | MS.gene95446:CDS |
| TCAGCTGGTCATTATCTATT+AGG | 0.252176 | 7.4:+80819239 | MS.gene95446:CDS |
| TCCATTCCTTCCAAATTATA+AGG | 0.254107 | 7.4:-80825043 | None:intergenic |
| TTCCAAGCTCATTAGTATAT+TGG | 0.257005 | 7.4:-80828056 | None:intergenic |
| TATGAAGAGTTGTGCATATT+AGG | 0.273818 | 7.4:+80819592 | MS.gene95446:CDS |
| TTAGAAGCTGATCGGGCTTT+TGG | 0.286826 | 7.4:+80825001 | MS.gene95446:CDS |
| CCTGTATTGGGAGGAACTTC+TGG | 0.291001 | 7.4:+80820684 | MS.gene95446:CDS |
| TACTGCTTTGCATGCGTTAA+AGG | 0.294768 | 7.4:+80827852 | MS.gene95446:CDS |
| CAAGGCCTAAAAGATATTTC+TGG | 0.295547 | 7.4:+80820645 | MS.gene95446:CDS |
| GCGACATACCCTTTAAAATA+TGG | 0.305456 | 7.4:-80818534 | None:intergenic |
| AACAGATGCTGCTGCTATTA+AGG | 0.305543 | 7.4:+80828237 | MS.gene95446:CDS |
| TTAGACTTGGTTGCTTGTAT+AGG | 0.308660 | 7.4:+80823841 | MS.gene95446:CDS |
| CGAATTACTTGTGTCATCAT+TGG | 0.325509 | 7.4:-80820759 | None:intergenic |
| CAGCTGGTCATTATCTATTA+GGG | 0.326959 | 7.4:+80819240 | MS.gene95446:CDS |
| TTGCATGAGTTTCGATTGCC+TGG | 0.329090 | 7.4:-80820625 | None:intergenic |
| TCATATGCAGCCCACATTAG+AGG | 0.335098 | 7.4:-80819574 | None:intergenic |
| TTAGAACCTCGGAAGGGAAT+TGG | 0.339460 | 7.4:-80816798 | None:intergenic |
| GATTAATTTGGAAAGCCATT+TGG | 0.352098 | 7.4:-80827798 | None:intergenic |
| TTAGAAAGACCACTATTAAT+AGG | 0.357198 | 7.4:-80820711 | None:intergenic |
| GGTGTGCGCATATGCAAATC+TGG | 0.358538 | 7.4:-80827204 | None:intergenic |
| CTTCACCAAGAACTCTTAGA+AGG | 0.369169 | 7.4:-80823815 | None:intergenic |
| TCAACAGTTGTCTCTGGAAA+TGG | 0.370896 | 7.4:+80822074 | MS.gene95446:CDS |
| TGATGGGAAGGATCTATAAA+AGG | 0.374031 | 7.4:+80828152 | MS.gene95446:CDS |
| GCTTCATTATGGTATTGCTT+TGG | 0.386469 | 7.4:+80828198 | MS.gene95446:CDS |
| CCATTTGGCTGCACATTCCT+AGG | 0.390062 | 7.4:-80821054 | None:intergenic |
| CGGTACATGTAATTTCTCTA+TGG | 0.394990 | 7.4:-80828458 | None:intergenic |
| CAGTTTCATGATCTTTCTGC+AGG | 0.397634 | 7.4:-80827145 | None:intergenic |
| GCATATGCGCACACCCTTTG+TGG | 0.397835 | 7.4:+80827212 | MS.gene95446:CDS |
| CGGAGAACTCAAACTTCTCT+TGG | 0.398234 | 7.4:-80827765 | None:intergenic |
| ACCTTATAATTTGGAAGGAA+TGG | 0.398899 | 7.4:+80825042 | MS.gene95446:CDS |
| TAGAACCTCGGAAGGGAATT+GGG | 0.404353 | 7.4:-80816797 | None:intergenic |
| GAGAGAGCAATGCTTCATTA+TGG | 0.405070 | 7.4:+80828187 | MS.gene95446:CDS |
| GTGCTCATATTTGAGCCATT+TGG | 0.412116 | 7.4:-80821069 | None:intergenic |
| TGAGGAAGCACTGGCGGTAA+TGG | 0.412886 | 7.4:+80827982 | MS.gene95446:CDS |
| CATCATGGAGCACCTGTATT+GGG | 0.414054 | 7.4:+80820672 | MS.gene95446:CDS |
| TTTGGAAAGCCATTTGGAAA+TGG | 0.416130 | 7.4:-80827792 | None:intergenic |
| AATTAGTGTCTACGCTTTGA+TGG | 0.416649 | 7.4:+80828135 | MS.gene95446:CDS |
| TCATCATGGAGCACCTGTAT+TGG | 0.416929 | 7.4:+80820671 | MS.gene95446:CDS |
| TACTCTTCTAAGCATCTTGG+TGG | 0.427824 | 7.4:+80822104 | MS.gene95446:CDS |
| CTTAATACTTGTCCACCAAC+TGG | 0.429758 | 7.4:-80823753 | None:intergenic |
| TGATTATTTAGAAGCTGATC+GGG | 0.430234 | 7.4:+80824994 | MS.gene95446:CDS |
| AGTAACAGCCAGCCAACAAT+TGG | 0.431456 | 7.4:-80818483 | None:intergenic |
| TACAATGCTTGGTATGGACT+TGG | 0.432768 | 7.4:+80827727 | MS.gene95446:CDS |
| ATCTTTGGTGTAGCATCTAA+AGG | 0.436385 | 7.4:+80826460 | MS.gene95446:intron |
| CCTAATTCAACAGTTGTCTC+TGG | 0.438226 | 7.4:+80822068 | MS.gene95446:CDS |
| TGCTCTGGCAGGTGCGCGAT+GGG | 0.439652 | 7.4:+80827110 | MS.gene95446:intron |
| GGAAGCTAAATCTTATGAAC+AGG | 0.440977 | 7.4:+80823716 | MS.gene95446:CDS |
| GGAAGATGGCGTTGGAGTGA+AGG | 0.441123 | 7.4:-80816756 | None:intergenic |
| TCAGTTGATGAATGCAACTT+TGG | 0.442023 | 7.4:-80820552 | None:intergenic |
| ACAGACAAATCTCCAATTGT+TGG | 0.442641 | 7.4:+80818471 | MS.gene95446:intron |
| CACTGGCTGGGTTCTTTCCC+AGG | 0.450596 | 7.4:+80824076 | MS.gene95446:CDS |
| TCCTGTTCCAATGTATCAAA+AGG | 0.452430 | 7.4:+80828033 | MS.gene95446:CDS |
| TTCATAAGATTTAGCTTCCA+TGG | 0.457915 | 7.4:-80823712 | None:intergenic |
| CTCCGAACACCATTTCCAAA+TGG | 0.459181 | 7.4:+80827783 | MS.gene95446:CDS |
| GGCCAATATACTAATGAGCT+TGG | 0.459336 | 7.4:+80828054 | MS.gene95446:CDS |
| AGCCCCTCGAAGAAAGTTTG+TGG | 0.460066 | 7.4:+80821140 | MS.gene95446:CDS |
| AGCCATTTGGAAATGGTGTT+CGG | 0.463900 | 7.4:-80827785 | None:intergenic |
| TGGTTGCTTGTATAGGTGCC+AGG | 0.465471 | 7.4:+80823848 | MS.gene95446:CDS |
| CGAAGAAAGTTTGTGGATGA+AGG | 0.470173 | 7.4:+80821147 | MS.gene95446:CDS |
| ATGAAAGGCATTACAATGCT+TGG | 0.470224 | 7.4:+80827716 | MS.gene95446:CDS |
| CATCCACAAACTTTCTTCGA+GGG | 0.471086 | 7.4:-80821143 | None:intergenic |
| TAATGACCAGCTGAACCGTT+TGG | 0.472627 | 7.4:-80819230 | None:intergenic |
| CGACGTAGTTCGAGACTCTC+AGG | 0.477112 | 7.4:+80822023 | MS.gene95446:CDS |
| CCAGAAGTTCCTCCCAATAC+AGG | 0.479498 | 7.4:-80820684 | None:intergenic |
| TCATCCACAAACTTTCTTCG+AGG | 0.481966 | 7.4:-80821144 | None:intergenic |
| AGTTACTCTTCTAAGCATCT+TGG | 0.485119 | 7.4:+80822101 | MS.gene95446:CDS |
| CCTAGGAATGTGCAGCCAAA+TGG | 0.496714 | 7.4:+80821054 | MS.gene95446:CDS |
| ATGCTCTGGCAGGTGCGCGA+TGG | 0.496934 | 7.4:+80827109 | MS.gene95446:intron |
| GATATTTCTGGAAATCATCA+TGG | 0.501072 | 7.4:+80820657 | MS.gene95446:CDS |
| TTGATTATTTAGAAGCTGAT+CGG | 0.502990 | 7.4:+80824993 | MS.gene95446:CDS |
| GAAGTTAAGTTACCTGGCTC+AGG | 0.503495 | 7.4:+80826490 | MS.gene95446:CDS |
| ATAAGCATTACAACACTGGC+TGG | 0.503811 | 7.4:+80824063 | MS.gene95446:CDS |
| TAGGTTCCAAACGGTTCAGC+TGG | 0.504233 | 7.4:+80819224 | MS.gene95446:intron |
| ATCAACAAGTATTGCTTCCA+TGG | 0.504858 | 7.4:-80816707 | None:intergenic |
| CATAGAGAAATTACATGTAC+CGG | 0.511603 | 7.4:+80828459 | MS.gene95446:CDS |
| ATAGAAGCCTACCATGATTG+AGG | 0.511818 | 7.4:-80826539 | None:intergenic |
| TGGCGTTGGAGTGAAGGAAA+TGG | 0.512991 | 7.4:-80816750 | None:intergenic |
| TTTGTATCAATTCCTGAGCC+AGG | 0.514039 | 7.4:-80826502 | None:intergenic |
| ATTGATTGAAGGAACACAAA+CGG | 0.516555 | 7.4:+80818742 | MS.gene95446:intron |
| AGCGTAGACACTAATTTCGC+GGG | 0.517236 | 7.4:-80828128 | None:intergenic |
| ATCGCTTAGCTCCTCAATCA+TGG | 0.519628 | 7.4:+80826528 | MS.gene95446:CDS |
| TCTGGTCATCCTATTAATAG+TGG | 0.520693 | 7.4:+80820702 | MS.gene95446:CDS |
| ACTTGTGTCATCATTGGAGC+TGG | 0.522228 | 7.4:-80820753 | None:intergenic |
| GTAGAGTTCACTGTTGACCT+TGG | 0.524448 | 7.4:-80821111 | None:intergenic |
| AGGCATTACAATGCTTGGTA+TGG | 0.525641 | 7.4:+80827721 | MS.gene95446:CDS |
| ACAAATCTCCAATTGTTGGC+TGG | 0.526349 | 7.4:+80818475 | MS.gene95446:CDS |
| ATTGTTGGTACAGGATGCAC+TGG | 0.529333 | 7.4:+80824019 | MS.gene95446:intron |
| ATTAGTGTCTACGCTTTGAT+GGG | 0.532064 | 7.4:+80828136 | MS.gene95446:CDS |
| TTCATACTCATGTCCACAAA+GGG | 0.535428 | 7.4:-80827225 | None:intergenic |
| TGCATGAGTTTCGATTGCCT+GGG | 0.540005 | 7.4:-80820624 | None:intergenic |
| GAGACGGTGAGAGAGGAAGA+TGG | 0.540981 | 7.4:-80816770 | None:intergenic |
| ATTACATGTACCGGATGAGA+TGG | 0.541241 | 7.4:+80828468 | MS.gene95446:CDS |
| TCAGCACTAGGCTCATTAGC+AGG | 0.542382 | 7.4:-80818839 | None:intergenic |
| GGGCGCAGAGACGGTGAGAG+AGG | 0.543442 | 7.4:-80816777 | None:intergenic |
| AAGTTGTCATCCATCTCATC+CGG | 0.544216 | 7.4:-80828478 | None:intergenic |
| GTGTCTACGCTTTGATGGGA+AGG | 0.547052 | 7.4:+80828140 | MS.gene95446:CDS |
| GAACACAAACGGCTCAATCT+CGG | 0.548652 | 7.4:+80818753 | MS.gene95446:CDS |
| GCCAATGAAAACATAGATGA+AGG | 0.550686 | 7.4:+80822185 | MS.gene95446:CDS |
| TCTGTTATATTGTCATACCT+TGG | 0.550817 | 7.4:+80827829 | MS.gene95446:CDS |
| AAGGGAATTGGGCGCAGAGA+CGG | 0.551413 | 7.4:-80816786 | None:intergenic |
| GCAGCAAATATTCCAGTTGG+TGG | 0.553065 | 7.4:+80823741 | MS.gene95446:CDS |
| CATACTCTTTAAGCTCCTCT+AGG | 0.553295 | 7.4:-80828102 | None:intergenic |
| AATGCTACCAGTGTGCACTC+AGG | 0.554354 | 7.4:+80827689 | MS.gene95446:CDS |
| ACAGAGAAGTGAGGAAGCAC+TGG | 0.557730 | 7.4:+80827973 | MS.gene95446:intron |
| ATGACACCTTATAATTTGGA+AGG | 0.560199 | 7.4:+80825037 | MS.gene95446:CDS |
| ATGCTACCAGTGTGCACTCA+GGG | 0.564220 | 7.4:+80827690 | MS.gene95446:CDS |
| GTGAGAGAGGAAGATGGCGT+TGG | 0.565535 | 7.4:-80816764 | None:intergenic |
| CTGCGCCCAATTCCCTTCCG+AGG | 0.567139 | 7.4:+80816792 | MS.gene95446:CDS |
| CCAGTGTTGTAATGCTTATG+TGG | 0.568677 | 7.4:-80824059 | None:intergenic |
| GGATGAAGGAAAGTTAAGAA+AGG | 0.569987 | 7.4:+80821161 | MS.gene95446:CDS |
| TGTCAATGGATCCTCTAATG+TGG | 0.571193 | 7.4:+80819563 | MS.gene95446:CDS |
| GGTCAGTATTTCAGAAGCAC+CGG | 0.577342 | 7.4:-80823793 | None:intergenic |
| GTGCACTCAGGGTTGATGAA+AGG | 0.578271 | 7.4:+80827701 | MS.gene95446:CDS |
| AGCACTGGCGGTAATGGAGA+AGG | 0.578285 | 7.4:+80827988 | MS.gene95446:CDS |
| AGTTCGCAAGGGACAACCAT+GGG | 0.580713 | 7.4:+80822163 | MS.gene95446:CDS |
| TCGTTCTGTGACAGTTCGCA+AGG | 0.585124 | 7.4:+80822151 | MS.gene95446:CDS |
| CGTTCTGTGACAGTTCGCAA+GGG | 0.587806 | 7.4:+80822152 | MS.gene95446:CDS |
| AGATATGAAGTTAAGTTACC+TGG | 0.588069 | 7.4:+80826484 | MS.gene95446:CDS |
| ACTGTCACAGAACGAAATGC+TGG | 0.590313 | 7.4:-80822143 | None:intergenic |
| AAGCGTAGACACTAATTTCG+CGG | 0.591077 | 7.4:-80828129 | None:intergenic |
| GCAGCAGCATCTGTTGCAGA+AGG | 0.591255 | 7.4:-80828229 | None:intergenic |
| ATCCACAAACTTTCTTCGAG+GGG | 0.593768 | 7.4:-80821142 | None:intergenic |
| GTCAATGGATCCTCTAATGT+GGG | 0.594979 | 7.4:+80819564 | MS.gene95446:CDS |
| GTGTGCGCATATGCAAATCT+GGG | 0.597112 | 7.4:-80827203 | None:intergenic |
| CTTAACGTGTAGGTTCCAAA+CGG | 0.599221 | 7.4:+80819215 | MS.gene95446:intron |
| TTCTACTTCCTCGTCTACCA+TGG | 0.607177 | 7.4:+80823695 | MS.gene95446:CDS |
| TTCACCAAGAACTCTTAGAA+GGG | 0.608579 | 7.4:-80823814 | None:intergenic |
| TGCCATCTTAAAATGATGAA+CGG | 0.609344 | 7.4:-80819539 | None:intergenic |
| TGTCAGAAGATGTGAGTCCC+AGG | 0.611990 | 7.4:+80820607 | MS.gene95446:CDS |
| CCACATAAGCATTACAACAC+TGG | 0.615459 | 7.4:+80824059 | MS.gene95446:CDS |
| TATGCTTGTACCTCAGCACT+AGG | 0.619300 | 7.4:-80818851 | None:intergenic |
| TGCTAATGAGCCTAGTGCTG+AGG | 0.619681 | 7.4:+80818841 | MS.gene95446:CDS |
| GAAGCAGCAAATATTCCAGT+TGG | 0.621965 | 7.4:+80823738 | MS.gene95446:CDS |
| CATCAACCCTGAGTGCACAC+TGG | 0.627482 | 7.4:-80827696 | None:intergenic |
| AGTAGCTCAAAAGTCATCAC+CGG | 0.628897 | 7.4:+80823774 | MS.gene95446:CDS |
| ACTCTTCTAAGCATCTTGGT+GGG | 0.631595 | 7.4:+80822105 | MS.gene95446:CDS |
| CATAATTTGACAGAGAAGTG+AGG | 0.632053 | 7.4:+80827964 | MS.gene95446:intron |
| TTTGGCTGCACATTCCTAGG+TGG | 0.639023 | 7.4:-80821051 | None:intergenic |
| GTTCATACTCATGTCCACAA+AGG | 0.640488 | 7.4:-80827226 | None:intergenic |
| TAAGCATTACAACACTGGCT+GGG | 0.643024 | 7.4:+80824064 | MS.gene95446:CDS |
| CATGGAGCACCTGTATTGGG+AGG | 0.646393 | 7.4:+80820675 | MS.gene95446:CDS |
| TGCTTGGTATGGACTTGGAA+TGG | 0.647273 | 7.4:+80827732 | MS.gene95446:CDS |
| AAAGTTGCATTCATCAACTG+AGG | 0.647738 | 7.4:+80820554 | MS.gene95446:CDS |
| TTTAGCTTCCATGGTAGACG+AGG | 0.652731 | 7.4:-80823703 | None:intergenic |
| AAATCTGGGATTTAGTTGCA+CGG | 0.652907 | 7.4:-80827189 | None:intergenic |
| AGGCAATCGAAACTCATGCA+AGG | 0.653042 | 7.4:+80820627 | MS.gene95446:CDS |
| GAGAAGTGAGGAAGCACTGG+CGG | 0.665746 | 7.4:+80827976 | MS.gene95446:intron |
| TGATGAATGCAACTTTGGAG+AGG | 0.666230 | 7.4:-80820547 | None:intergenic |
| TATCAGCTGTTGCTCCACCT+AGG | 0.666789 | 7.4:+80821037 | MS.gene95446:CDS |
| TGAGGCTTTGGAAGTCCTAG+AGG | 0.679401 | 7.4:+80828087 | MS.gene95446:CDS |
| CAGTTCGCAAGGGACAACCA+TGG | 0.679439 | 7.4:+80822162 | MS.gene95446:CDS |
| GACAATATAACAGATGACTG+TGG | 0.698069 | 7.4:-80827820 | None:intergenic |
| GCGTAGACACTAATTTCGCG+GGG | 0.698718 | 7.4:-80828127 | None:intergenic |
| ACGCATGCAAAGCAGTACCA+AGG | 0.704030 | 7.4:-80827846 | None:intergenic |
| AAAGTGCTGAGAATTCTCCA+AGG | 0.711777 | 7.4:+80821094 | MS.gene95446:CDS |
| GAGAGTCTCGAACTACGTCG+AGG | 0.721990 | 7.4:-80822020 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 80816709 | 80828504 | 80816709 | ID=MS.gene95446 |
| chr7.4 | mRNA | 80816709 | 80828504 | 80816709 | ID=MS.gene95446.t1;Parent=MS.gene95446 |
| chr7.4 | exon | 80816709 | 80816813 | 80816709 | ID=MS.gene95446.t1.exon1;Parent=MS.gene95446.t1 |
| chr7.4 | CDS | 80816709 | 80816813 | 80816709 | ID=cds.MS.gene95446.t1;Parent=MS.gene95446.t1 |
| chr7.4 | exon | 80818475 | 80818547 | 80818475 | ID=MS.gene95446.t1.exon2;Parent=MS.gene95446.t1 |
| chr7.4 | CDS | 80818475 | 80818547 | 80818475 | ID=cds.MS.gene95446.t1;Parent=MS.gene95446.t1 |
| chr7.4 | exon | 80818753 | 80818862 | 80818753 | ID=MS.gene95446.t1.exon3;Parent=MS.gene95446.t1 |
| chr7.4 | CDS | 80818753 | 80818862 | 80818753 | ID=cds.MS.gene95446.t1;Parent=MS.gene95446.t1 |
| chr7.4 | exon | 80819227 | 80819273 | 80819227 | ID=MS.gene95446.t1.exon4;Parent=MS.gene95446.t1 |
| chr7.4 | CDS | 80819227 | 80819273 | 80819227 | ID=cds.MS.gene95446.t1;Parent=MS.gene95446.t1 |
| chr7.4 | exon | 80819516 | 80819613 | 80819516 | ID=MS.gene95446.t1.exon5;Parent=MS.gene95446.t1 |
| chr7.4 | CDS | 80819516 | 80819613 | 80819516 | ID=cds.MS.gene95446.t1;Parent=MS.gene95446.t1 |
| chr7.4 | exon | 80820469 | 80820773 | 80820469 | ID=MS.gene95446.t1.exon6;Parent=MS.gene95446.t1 |
| chr7.4 | CDS | 80820469 | 80820773 | 80820469 | ID=cds.MS.gene95446.t1;Parent=MS.gene95446.t1 |
| chr7.4 | exon | 80821036 | 80821182 | 80821036 | ID=MS.gene95446.t1.exon7;Parent=MS.gene95446.t1 |
| chr7.4 | CDS | 80821036 | 80821182 | 80821036 | ID=cds.MS.gene95446.t1;Parent=MS.gene95446.t1 |
| chr7.4 | exon | 80821981 | 80822206 | 80821981 | ID=MS.gene95446.t1.exon8;Parent=MS.gene95446.t1 |
| chr7.4 | CDS | 80821981 | 80822206 | 80821981 | ID=cds.MS.gene95446.t1;Parent=MS.gene95446.t1 |
| chr7.4 | exon | 80823643 | 80823869 | 80823643 | ID=MS.gene95446.t1.exon9;Parent=MS.gene95446.t1 |
| chr7.4 | CDS | 80823643 | 80823869 | 80823643 | ID=cds.MS.gene95446.t1;Parent=MS.gene95446.t1 |
| chr7.4 | exon | 80824032 | 80824097 | 80824032 | ID=MS.gene95446.t1.exon10;Parent=MS.gene95446.t1 |
| chr7.4 | CDS | 80824032 | 80824097 | 80824032 | ID=cds.MS.gene95446.t1;Parent=MS.gene95446.t1 |
| chr7.4 | exon | 80824971 | 80825087 | 80824971 | ID=MS.gene95446.t1.exon11;Parent=MS.gene95446.t1 |
| chr7.4 | CDS | 80824971 | 80825087 | 80824971 | ID=cds.MS.gene95446.t1;Parent=MS.gene95446.t1 |
| chr7.4 | exon | 80826473 | 80826549 | 80826473 | ID=MS.gene95446.t1.exon12;Parent=MS.gene95446.t1 |
| chr7.4 | CDS | 80826473 | 80826549 | 80826473 | ID=cds.MS.gene95446.t1;Parent=MS.gene95446.t1 |
| chr7.4 | exon | 80827121 | 80827240 | 80827121 | ID=MS.gene95446.t1.exon13;Parent=MS.gene95446.t1 |
| chr7.4 | CDS | 80827121 | 80827240 | 80827121 | ID=cds.MS.gene95446.t1;Parent=MS.gene95446.t1 |
| chr7.4 | exon | 80827654 | 80827873 | 80827654 | ID=MS.gene95446.t1.exon14;Parent=MS.gene95446.t1 |
| chr7.4 | CDS | 80827654 | 80827873 | 80827654 | ID=cds.MS.gene95446.t1;Parent=MS.gene95446.t1 |
| chr7.4 | exon | 80827977 | 80828258 | 80827977 | ID=MS.gene95446.t1.exon15;Parent=MS.gene95446.t1 |
| chr7.4 | CDS | 80827977 | 80828258 | 80827977 | ID=cds.MS.gene95446.t1;Parent=MS.gene95446.t1 |
| chr7.4 | exon | 80828454 | 80828504 | 80828454 | ID=MS.gene95446.t1.exon16;Parent=MS.gene95446.t1 |
| chr7.4 | CDS | 80828454 | 80828504 | 80828454 | ID=cds.MS.gene95446.t1;Parent=MS.gene95446.t1 |
| Gene Sequence |
| Protein sequence |
