AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene43188


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene43188.t1 MTR_7g019230 96.398 694 20 4 1 692 1 691 0.0 1381
MS.gene43188.t1 MTR_7g019230 96.324 680 20 4 15 692 1 677 0.0 1350
MS.gene43188.t1 MTR_6g016680 76.758 697 153 5 1 692 63 755 0.0 1090
MS.gene43188.t1 MTR_6g016745 76.389 72 17 0 581 652 21 92 1.06e-28 110
MS.gene43188.t1 MTR_1g103750 29.545 308 199 5 373 664 240 545 5.67e-28 119
MS.gene43188.t1 MTR_8g021140 27.055 292 203 3 383 664 255 546 4.87e-26 113
MS.gene43188.t1 MTR_6g033355 50.926 108 33 2 134 240 206 294 7.89e-26 108
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene43188.t1 AT2G20000 71.019 697 180 7 1 691 63 743 0.0 1014
MS.gene43188.t1 AT2G20000 67.875 607 168 8 1 601 63 648 0.0 830
MS.gene43188.t1 AT3G16320 46.165 704 324 12 3 692 66 728 0.0 584
MS.gene43188.t1 AT3G16320 45.881 704 315 13 3 692 66 717 0.0 575
MS.gene43188.t1 AT3G16320 42.115 520 248 11 3 510 66 544 3.22e-116 360
MS.gene43188.t1 AT3G16320 41.393 517 245 11 3 510 66 533 6.32e-113 351
MS.gene43188.t1 AT3G48150 31.600 250 164 3 383 627 255 502 3.07e-27 117
MS.gene43188.t1 AT3G48150 31.600 250 164 3 383 627 142 389 6.74e-27 115

Find 146 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAGATTACACCTTATAATT+TGG 0.184650 7.2:+78526586 MS.gene43188:CDS
CCTAATACAACAGCTGTTTC+TGG 0.198645 7.2:+78523013 MS.gene43188:CDS
ATCTATTAGGGCTCATTTAC+AGG 0.203393 7.2:+78519957 MS.gene43188:CDS
CCAGAAACAGCTGTTGTATT+AGG 0.212903 7.2:-78523013 None:intergenic
TTGGAGAGGTTGAGCAATTT+AGG 0.226200 7.2:-78521515 None:intergenic
TCAGCTGGTCATTATCTATT+AGG 0.232326 7.2:+78519944 MS.gene43188:CDS
CTGACCCTTCTAAGAGTTCT+TGG 0.248978 7.2:+78524668 MS.gene43188:CDS
TCCATTCCTTCCAAATTATA+AGG 0.254107 7.2:-78526596 None:intergenic
TTCCAAGCTCATTAGTATAT+TGG 0.257005 7.2:-78529532 None:intergenic
TACTGCTTTGCACGCTTTAA+AGG 0.265614 7.2:+78529328 MS.gene43188:CDS
TTTGGAAAGCCATTCGAAAA+TGG 0.268659 7.2:-78529268 None:intergenic
TATGAAGAGTTGTGCATATT+AGG 0.273818 7.2:+78520294 MS.gene43188:CDS
CAGATGAGTATGGATTAATT+TGG 0.279863 7.2:-78529286 None:intergenic
TTAGAAGCTGATCGGGCTTT+TGG 0.286826 7.2:+78526554 MS.gene43188:CDS
CAAGGCCTAAAAGATATTTC+TGG 0.295547 7.2:+78521621 MS.gene43188:CDS
AACAGATGCTGCTGCTATTA+AGG 0.305543 7.2:+78529713 MS.gene43188:CDS
GGTAATGGAGAAGGCTATTA+TGG 0.316109 7.2:+78529473 MS.gene43188:CDS
CAGCTGGTCATTATCTATTA+GGG 0.326959 7.2:+78519945 MS.gene43188:CDS
TCATATGCAGCCCACATTAG+AGG 0.335098 7.2:-78520276 None:intergenic
GGTGTGCGCATATGCAAATC+TGG 0.358538 7.2:-78528685 None:intergenic
ACAACAGCTGTTTCTGGAAA+TGG 0.363178 7.2:+78523019 MS.gene43188:CDS
CCTGTATTGGGAGGAACTTC+GGG 0.363214 7.2:+78521660 MS.gene43188:CDS
CTTCACCAAGAACTCTTAGA+AGG 0.369169 7.2:-78524673 None:intergenic
ACCTTATAATTTGGAAGGAA+TGG 0.369882 7.2:+78526595 MS.gene43188:CDS
TGATGGGAAGGATCTATAAA+AGG 0.374031 7.2:+78529628 MS.gene43188:CDS
GCCTTCTGATACATTGGAAC+AGG 0.378578 7.2:-78529510 None:intergenic
GTAGAGTTCACTGTTGATCT+TGG 0.385561 7.2:-78522080 None:intergenic
GCTTCATTATGGTATTGCTT+TGG 0.386469 7.2:+78529674 MS.gene43188:CDS
CGGTACATGTAATTTCTCTA+TGG 0.394990 7.2:-78529934 None:intergenic
CAGTTTCATGATCTTTCTGC+AGG 0.397634 7.2:-78528626 None:intergenic
GCATATGCGCACACCCTTTG+TGG 0.397835 7.2:+78528693 MS.gene43188:CDS
CGGAGAACTCAAACTTCTCT+TGG 0.398234 7.2:-78529241 None:intergenic
TCAGTTGATGAATGCAACTT+TGG 0.404670 7.2:-78521534 None:intergenic
GAGAGAGCAATGCTTCATTA+TGG 0.405070 7.2:+78529663 MS.gene43188:CDS
GTGCTCATATTTGAGCCATT+TGG 0.412116 7.2:-78522038 None:intergenic
CATCATGGAGCACCTGTATT+GGG 0.414054 7.2:+78521648 MS.gene43188:CDS
AATTAGTGTCTACGCTTTGA+TGG 0.416649 7.2:+78529611 MS.gene43188:CDS
TCATCATGGAGCACCTGTAT+TGG 0.416929 7.2:+78521647 MS.gene43188:CDS
TCGGGTCAACCTATTAATAG+TGG 0.420054 7.2:+78521678 MS.gene43188:CDS
ATATTGGCCTTCTGATACAT+TGG 0.424592 7.2:-78529516 None:intergenic
CTTAATACTTGTCCACCAAC+TGG 0.429758 7.2:-78524611 None:intergenic
TGATTATTTAGAAGCTGATC+GGG 0.430234 7.2:+78526547 MS.gene43188:CDS
TCCTCTTCTAAGCATCTTGG+TGG 0.430820 7.2:+78523049 MS.gene43188:CDS
TACAATGCTTGGTATGGACT+TGG 0.432768 7.2:+78529203 MS.gene43188:CDS
GACAATATAACAGATGAGTA+TGG 0.434489 7.2:-78529296 None:intergenic
TAATGACCAGCTGAACCATT+TGG 0.437349 7.2:-78519935 None:intergenic
GGAAGCTAAATCTTATGAAC+AGG 0.440977 7.2:+78524574 MS.gene43188:CDS
TGCATGAATTTCGATTGCCT+TGG 0.441750 7.2:-78521600 None:intergenic
ACCTGTATTGGGAGGAACTT+CGG 0.450201 7.2:+78521659 MS.gene43188:CDS
CACTGGCTGGGTTCTTTCCC+AGG 0.450596 7.2:+78524936 MS.gene43188:CDS
CGACGAAGTTCGAGACTCTC+AGG 0.456464 7.2:+78522968 MS.gene43188:CDS
TTCATAAGATTTAGCTTCCA+TGG 0.457915 7.2:-78524570 None:intergenic
AGTTCCTCTTCTAAGCATCT+TGG 0.458881 7.2:+78523046 MS.gene43188:CDS
GGCCAATATACTAATGAGCT+TGG 0.459336 7.2:+78529530 MS.gene43188:CDS
AGCCCCTCGAAGAAAGTTTG+TGG 0.460066 7.2:+78522109 MS.gene43188:CDS
ATGCTACCAGAGTGCACTTA+GGG 0.464458 7.2:+78529166 MS.gene43188:CDS
CCCGAAGTTCCTCCCAATAC+AGG 0.468336 7.2:-78521660 None:intergenic
CGAAGAAAGTTTGTGGATGA+AGG 0.470173 7.2:+78522116 MS.gene43188:CDS
ATGAAAGGCATTACAATGCT+TGG 0.470224 7.2:+78529192 MS.gene43188:CDS
CATCCACAAACTTTCTTCGA+GGG 0.471086 7.2:-78522112 None:intergenic
TCTTTGGTTGTAGCATCTAA+AGG 0.474741 7.2:+78528075 MS.gene43188:intron
TGAGGAAGCACTAGTGGTAA+TGG 0.475259 7.2:+78529458 MS.gene43188:CDS
GCTGCACATTCCTACACAAA+GGG 0.476291 7.2:-78522016 None:intergenic
ACTTGTGCCATCGTTGGAGC+TGG 0.477607 7.2:-78521729 None:intergenic
TCATCCACAAACTTTCTTCG+AGG 0.481966 7.2:-78522113 None:intergenic
ATTGTTGGTACAGGATGCAC+TGG 0.491702 7.2:+78524879 MS.gene43188:intron
GATATTTCTGGAAATCATCA+TGG 0.501072 7.2:+78521633 MS.gene43188:CDS
AGCCATTCGAAAATGGTGTT+CGG 0.502634 7.2:-78529261 None:intergenic
TTGATTATTTAGAAGCTGAT+CGG 0.502990 7.2:+78526546 MS.gene43188:CDS
TGCCTGCTTGTATAAGTGCC+AGG 0.505129 7.2:+78524706 MS.gene43188:CDS
TGCCCTGTCAGGTGCGCGAT+GGG 0.505457 7.2:+78528591 MS.gene43188:intron
CTAAGCATTACAACACTGGC+TGG 0.507062 7.2:+78524923 MS.gene43188:CDS
AATGCTACCAGAGTGCACTT+AGG 0.507923 7.2:+78529165 MS.gene43188:CDS
GAAGTTAAGTTACCTGGCTC+AGG 0.510526 7.2:+78528105 MS.gene43188:CDS
CATAGAGAAATTACATGTAC+CGG 0.511603 7.2:+78529935 MS.gene43188:CDS
TTTGTATCAGTTCCTGAGCC+AGG 0.515853 7.2:-78528117 None:intergenic
AGCGTAGACACTAATTTCGC+GGG 0.517236 7.2:-78529604 None:intergenic
ATCGCTTAGCTCCTCAATCA+TGG 0.519628 7.2:+78528143 MS.gene43188:CDS
TAGGTTCCAAATGGTTCAGC+TGG 0.525206 7.2:+78519929 MS.gene43188:intron
AGGCATTACAATGCTTGGTA+TGG 0.525641 7.2:+78529197 MS.gene43188:CDS
ACAGTGCCATCTTAAAATGA+TGG 0.530855 7.2:-78520245 None:intergenic
ATTAGTGTCTACGCTTTGAT+GGG 0.532064 7.2:+78529612 MS.gene43188:CDS
CAGCCAGTGTTGTAATGCTT+AGG 0.534013 7.2:-78524922 None:intergenic
ATTACACCTTATAATTTGGA+AGG 0.534509 7.2:+78526590 MS.gene43188:CDS
TTCATACTCATGTCCACAAA+GGG 0.535428 7.2:-78528706 None:intergenic
CTTAACGTGTAGGTTCCAAA+TGG 0.538401 7.2:+78519920 MS.gene43188:intron
AAGTTGTCGTCCATCTCATC+CGG 0.539528 7.2:-78529954 None:intergenic
TCAGCACTAGGCTCATTAGC+AGG 0.542382 7.2:-78519539 None:intergenic
TGAATTACTTGTGCCATCGT+TGG 0.545561 7.2:-78521735 None:intergenic
GTGTCTACGCTTTGATGGGA+AGG 0.547052 7.2:+78529616 MS.gene43188:CDS
TCTGTTATATTGTCATACCT+TGG 0.548645 7.2:+78529305 MS.gene43188:CDS
GCCAATGAAAACATAGATGA+AGG 0.550686 7.2:+78523130 MS.gene43188:CDS
TGTAGGAATGTGCAGCCAAA+TGG 0.552025 7.2:+78522023 MS.gene43188:CDS
GCAGCAAATATTCCAGTTGG+TGG 0.553065 7.2:+78524599 MS.gene43188:CDS
CATACTCTTTAAGCTCCTCT+AGG 0.553295 7.2:-78529578 None:intergenic
ATTACATGTACCGGATGAGA+TGG 0.553660 7.2:+78529944 MS.gene43188:CDS
TCCTGTTCCAATGTATCAGA+AGG 0.566463 7.2:+78529509 MS.gene43188:CDS
ATGCCCTGTCAGGTGCGCGA+TGG 0.568632 7.2:+78528590 MS.gene43188:intron
GGATGAAGGAAAGTTAAGAA+AGG 0.569987 7.2:+78522130 MS.gene43188:CDS
TGTCAATGGATCCTCTAATG+TGG 0.571193 7.2:+78520265 MS.gene43188:CDS
GAACACAAATGGCTCAATCT+CGG 0.572722 7.2:+78519453 None:intergenic
ATAGAAGCCTACCATGATTG+AGG 0.572929 7.2:-78528154 None:intergenic
GAGAAGTGAGGAAGCACTAG+TGG 0.574522 7.2:+78529452 MS.gene43188:intron
TGTCAGAAGATGCGAGTCCA+AGG 0.577795 7.2:+78521583 MS.gene43188:CDS
TAATACGCCAGCTCCAACGA+TGG 0.579442 7.2:+78521722 MS.gene43188:CDS
AGTTCGCAAGGGACAACCAT+GGG 0.580713 7.2:+78523108 MS.gene43188:CDS
TACCTGGCACTTATACAAGC+AGG 0.583737 7.2:-78524708 None:intergenic
GGCTGCACATTCCTACACAA+AGG 0.584418 7.2:-78522017 None:intergenic
TCGTTCTGTGACAGTTCGCA+AGG 0.585124 7.2:+78523096 MS.gene43188:CDS
GGTCAGTATCTCAGAAGCAC+CGG 0.585457 7.2:-78524651 None:intergenic
CCAGTGTTGTAATGCTTAGG+TGG 0.585936 7.2:-78524919 None:intergenic
CGTTCTGTGACAGTTCGCAA+GGG 0.587806 7.2:+78523097 MS.gene43188:CDS
AGATATGAAGTTAAGTTACC+TGG 0.588069 7.2:+78528099 MS.gene43188:CDS
CATCAACCCTAAGTGCACTC+TGG 0.589863 7.2:-78529172 None:intergenic
AAGCGTAGACACTAATTTCG+CGG 0.591077 7.2:-78529605 None:intergenic
GCAGCAGCATCTGTTGCAGA+AGG 0.591255 7.2:-78529705 None:intergenic
ATCCACAAACTTTCTTCGAG+GGG 0.593768 7.2:-78522111 None:intergenic
GTCAATGGATCCTCTAATGT+GGG 0.594979 7.2:+78520266 MS.gene43188:CDS
AGCACTAGTGGTAATGGAGA+AGG 0.595184 7.2:+78529464 MS.gene43188:CDS
CCTCTTCTAAGCATCTTGGT+GGG 0.596960 7.2:+78523050 MS.gene43188:CDS
GTGTGCGCATATGCAAATCT+GGG 0.597112 7.2:-78528684 None:intergenic
TTCTACTTCCTCGTCTACCA+TGG 0.607177 7.2:+78524553 MS.gene43188:CDS
TTCACCAAGAACTCTTAGAA+GGG 0.608579 7.2:-78524672 None:intergenic
TGCCATCTTAAAATGATGGA+CGG 0.609130 7.2:-78520241 None:intergenic
AGTAGCTCAAAAGTCTTCAC+CGG 0.610228 7.2:+78524632 MS.gene43188:CDS
CCACCTAAGCATTACAACAC+TGG 0.615459 7.2:+78524919 MS.gene43188:CDS
CCCACCAAGATGCTTAGAAG+AGG 0.617299 7.2:-78523050 None:intergenic
GTGCACTTAGGGTTGATGAA+AGG 0.619266 7.2:+78529177 MS.gene43188:CDS
TATGCTTGTACCTCAGCACT+AGG 0.619300 7.2:-78519551 None:intergenic
TGCTAATGAGCCTAGTGCTG+AGG 0.619681 7.2:+78519541 MS.gene43188:CDS
GAAGCAGCAAATATTCCAGT+TGG 0.621965 7.2:+78524596 MS.gene43188:CDS
CATAATTTGACAGAGAAGTG+AGG 0.625021 7.2:+78529440 MS.gene43188:intron
TAAGCATTACAACACTGGCT+GGG 0.628449 7.2:+78524924 MS.gene43188:CDS
GTTCATACTCATGTCCACAA+AGG 0.640488 7.2:-78528707 None:intergenic
AGGCAATCGAAATTCATGCA+AGG 0.642672 7.2:+78521603 MS.gene43188:CDS
CATGGAGCACCTGTATTGGG+AGG 0.646393 7.2:+78521651 MS.gene43188:CDS
TGCTTGGTATGGACTTGGAA+TGG 0.647273 7.2:+78529208 MS.gene43188:CDS
TTTAGCTTCCATGGTAGACG+AGG 0.652731 7.2:-78524561 None:intergenic
TGATGAATGCAACTTTGGAG+AGG 0.666230 7.2:-78521529 None:intergenic
TGAGGCTTTGGAAGTCCTAG+AGG 0.679401 7.2:+78529563 MS.gene43188:CDS
CAGTTCGCAAGGGACAACCA+TGG 0.679439 7.2:+78523107 MS.gene43188:CDS
CTGCACATTCCTACACAAAG+GGG 0.681925 7.2:-78522015 None:intergenic
GAGAGTCTCGAACTTCGTCG+AGG 0.685819 7.2:-78522965 None:intergenic
AAGCGTGCAAAGCAGTACCA+AGG 0.695747 7.2:-78529322 None:intergenic
GCGTAGACACTAATTTCGCG+GGG 0.698718 7.2:-78529603 None:intergenic
TGCACATTCCTACACAAAGG+GGG 0.701237 7.2:-78522014 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr7.2 gene 78519461 78529980 78519461 ID=MS.gene43188
chr7.2 mRNA 78519461 78529980 78519461 ID=MS.gene43188.t1;Parent=MS.gene43188
chr7.2 exon 78519461 78519562 78519461 ID=MS.gene43188.t1.exon1;Parent=MS.gene43188.t1
chr7.2 CDS 78519461 78519562 78519461 ID=cds.MS.gene43188.t1;Parent=MS.gene43188.t1
chr7.2 exon 78519932 78519978 78519932 ID=MS.gene43188.t1.exon2;Parent=MS.gene43188.t1
chr7.2 CDS 78519932 78519978 78519932 ID=cds.MS.gene43188.t1;Parent=MS.gene43188.t1
chr7.2 exon 78520218 78520315 78520218 ID=MS.gene43188.t1.exon3;Parent=MS.gene43188.t1
chr7.2 CDS 78520218 78520315 78520218 ID=cds.MS.gene43188.t1;Parent=MS.gene43188.t1
chr7.2 exon 78521451 78521749 78521451 ID=MS.gene43188.t1.exon4;Parent=MS.gene43188.t1
chr7.2 CDS 78521451 78521749 78521451 ID=cds.MS.gene43188.t1;Parent=MS.gene43188.t1
chr7.2 exon 78521996 78522151 78521996 ID=MS.gene43188.t1.exon5;Parent=MS.gene43188.t1
chr7.2 CDS 78521996 78522151 78521996 ID=cds.MS.gene43188.t1;Parent=MS.gene43188.t1
chr7.2 exon 78522935 78523151 78522935 ID=MS.gene43188.t1.exon6;Parent=MS.gene43188.t1
chr7.2 CDS 78522935 78523151 78522935 ID=cds.MS.gene43188.t1;Parent=MS.gene43188.t1
chr7.2 exon 78524501 78524727 78524501 ID=MS.gene43188.t1.exon7;Parent=MS.gene43188.t1
chr7.2 CDS 78524501 78524727 78524501 ID=cds.MS.gene43188.t1;Parent=MS.gene43188.t1
chr7.2 exon 78524892 78524957 78524892 ID=MS.gene43188.t1.exon8;Parent=MS.gene43188.t1
chr7.2 CDS 78524892 78524957 78524892 ID=cds.MS.gene43188.t1;Parent=MS.gene43188.t1
chr7.2 exon 78526524 78526640 78526524 ID=MS.gene43188.t1.exon9;Parent=MS.gene43188.t1
chr7.2 CDS 78526524 78526640 78526524 ID=cds.MS.gene43188.t1;Parent=MS.gene43188.t1
chr7.2 exon 78528088 78528164 78528088 ID=MS.gene43188.t1.exon10;Parent=MS.gene43188.t1
chr7.2 CDS 78528088 78528164 78528088 ID=cds.MS.gene43188.t1;Parent=MS.gene43188.t1
chr7.2 exon 78528602 78528721 78528602 ID=MS.gene43188.t1.exon11;Parent=MS.gene43188.t1
chr7.2 CDS 78528602 78528721 78528602 ID=cds.MS.gene43188.t1;Parent=MS.gene43188.t1
chr7.2 exon 78529130 78529349 78529130 ID=MS.gene43188.t1.exon12;Parent=MS.gene43188.t1
chr7.2 CDS 78529130 78529349 78529130 ID=cds.MS.gene43188.t1;Parent=MS.gene43188.t1
chr7.2 exon 78529453 78529734 78529453 ID=MS.gene43188.t1.exon13;Parent=MS.gene43188.t1
chr7.2 CDS 78529453 78529734 78529453 ID=cds.MS.gene43188.t1;Parent=MS.gene43188.t1
chr7.2 exon 78529930 78529980 78529930 ID=MS.gene43188.t1.exon14;Parent=MS.gene43188.t1
chr7.2 CDS 78529930 78529980 78529930 ID=cds.MS.gene43188.t1;Parent=MS.gene43188.t1
Gene Sequence

>MS.gene43188

ATGGCTCAATCTCGGTACTTGTTTGCAATATCATGCTTTCAGATGAATCTTCTGAACGAAGCTGAAGCAGCATTATGTCCTGCTAATGAGCCTAGTGCTGAGGTACAAGCATAATTTGTTATGTATTTCAAATTAATAATTATTTTCTGAACTATTAGTGAAATTTGTAAAAAAATTCATCTTTCATCTTTTTGTTTTATTCCAAGTCTTATCAGCTATTAGCTATTAATAACTGTTAAAGAGTTCGATGAGATAAGGCTTGAACATCGGTTTATAAGTGACTGCAATCCTCACCTTACCAGCTGGTTTTGTAAGATTGAGTTAGGCCCAACCCAAAATTCTAAGAATAACATATGACATTGGTTCTATATGTTGCTCTGTTTTAAATTGTTTTTTATTTAAGCTATAATTTGTCAGTGTATGCACTAGGTGAAGTTGAATGACTATTTTTTGTTGTCTCTTAACGTGTAGGTTCCAAATGGTTCAGCTGGTCATTATCTATTAGGGCTCATTTACAGGTTGCTTATTAGTCTTACCATCAATTGTCAAAATACATGCTGAAAATATGAATTTTTGATTATATTCTTATTGATATTTTAAATTTTACATGAAAGATTATGATGGTAGATGCTTATAGTTTAACAATTGAATTGGTAAAAGTTACATTCTTAAAATATATTGGGTGGTGTATGTAATGTGTGTGTGAGAGACATGTTCATCCTTTTAAATTCTCTTTGATTGATATTCTCCTTTTCAGATACACTGACAGAAAGAAAAATGCCGTCCATCATTTTAAGATGGCACTGTCAATGGATCCTCTAATGTGGGCTGCATATGAAGAGTTGTGCATATTAGGTATGTATGATGATATTCACCTGATTTCTTGTGCTCACTGGGCATATTTGATGAAGTATGACCATGAACTGATTGGAGACGACCTAGTTTTTAGTTTTTGGAGCTGCTTTCTAGGCTATAAAGTTGTGGTTTGTATTTTATTGAGTACTTTAGGTTTTGATTAGATAAGCAGCTTTAAACAAAAAGGACGTGTTGAAAATTTTATGCTAAGAGAATATATAGTTTTCTTCTATTCACCTTATTGAACGGCTTCTTCTATATATATATATATATATATATATATATATATATATATATATATATATATATAAAGAAGGTACATGGATTTGAGCTGGCTTTTTCCCTTTCCAATTTTACCCTTTATTTAAAGTTTTTTATTTACTATTCTATCATTTTTATAATATTACTTAAATTGTTAATTAAAAAAATAGTTAAATCCCTTTAAATAAGAACAACCTCACTATAATAGTTAAATCCCTTTAACCCACTTGGGTTGGCCTGGTGGTGTTGGTTTGGGTCTTTCGAGTGTGCTCCTCCTCAAGGTCTCAGGTTCTATTCTCCTCGGTGCAAATTTCGGTGGGTTAGTTTAGCTTAAAATAAAATTATCTAAAGAAAAAATTTGATAGATATTATCGAAAGAAAAAATTACAAGGCATCTTAATCTGTTCTTGATTAATTTTGGATTTTTTTTCCTCATTTTTTAACTATTGAAATTTGAGTTGCTGTGCTCGTGTGCTTAAGTGATATTCTTAATTTTAAAGATAGTATAGTGTTTCTGTTCAAACGTTGGTGCTATCATCATTTTGTGCATCTTTACATATCTGAATGCTTACATAAGTAGGAACATAGTTACATGCATACATATAACTATGTGAACATTAATGCATATTTAACAATTATATACCCTAAAAAAAAACAATTATATAGTTTTCCTTGTTCCTTTTTCTCAGTTAATGCACCTGCTTGTGCTATTTTTTAGGCCAATTATTTGGTGTACTTCTAGCTTTGTTTTGTTTGTCTGAAAATGTTTAGTCTGTAGCAGTTGGGTAATTGTATCTCATTGAAAGCAGAAGCAGTTGTCATAAGCTGCTATTTATCATCATCATTAACAGCTTACTGTTTTCTGAATATTTAGGTGCTGCTGAAGAAGCAGTTGCATTTTTTGGTGAAGCAGCTGCTCTTTGCATACAAAAGCAATACCTAAATTGCTCAACCTCTCCAAAGTTGCATTCATCAACTGAGAATTTAGTTGACACTAGACACTGTGTGTCAGAAGATGCGAGTCCAAGGCAATCGAAATTCATGCAAGGCCTAAAAGATATTTCTGGAAATCATCATGGAGCACCTGTATTGGGAGGAACTTCGGGTCAACCTATTAATAGTGGTTTTTCTAACATATCATTTTATAATACGCCAGCTCCAACGATGGCACAAGTAATTCACTGACTGTATCTTGTTTTAGATTTTTTTGTATATGTTACGTTCTGTTTAAAAATTGTGAATAAGCTAAACTACATATTAATCACAGTTTTTCTAATTTTGAACATGGTCAGTTAAATTCAGAAATATTTGTAAGAAGTGTTTTATTATTTCATAAATATTGATACAGCTCTATTGAACATGGGCTTTGTCCAGTTTTCTTTCACATGGTTGATATTTTTTTTTTCAAATCTTTTGTAGTTATCAGGTGTTGCTCCTCCCCCTTTGTGTAGGAATGTGCAGCCAAATGGCTCAAATATGAGCACACAAAGTGCTGAGAGTTCTCCAAGATCAACAGTGAACTCTACTATTCAAGCCCCTCGAAGAAAGTTTGTGGATGAAGGAAAGTTAAGAAAGGTTGGGAAACTGTTGGCTCTAAATCTATTGTTGTCTGCTTCCATTGCATCACTAAATAAACTTACTTCCGTTTCTGTCTATAGACACTGATTTGAAATTCAGATTTTAAAGAGTCCAATAGCTCTGTATAATGTTCCACCTAGTGGAACAAGGCTTGGTTGTTGTTGTATAGAGATTGATTTGATTTAGTGATTTAATCTTACATACCATGTCAGTTTCGGACTCTTATTTGTCTCTCGGGAGTCAGTGTTGGTATTGATTGACTATCATGAATTTTATTACAGGGCATCTTTATTTAGCTTTTGATTTCATGTTAACAATTTCGTAGTTTGTGTTTTTTTTTCTTTTAAAAAAATTAATATGATCAAATTGATCAAGAAATTTTTTGGCCAAAAGCTCTTGTTTTCCTTTTCCAAATGTGAAATAATGAAAACCAAACATATACATTGTCATGAACCAGTAGCCCCAAATGGCTAAGCTATTCGGTGAAAGAAAGTAAACAATTTTATGTCTAACACACCTCCTATGCTACATCCCTTTGGACTTGAAGTGTGACTAATGTACAGACCCACCCAAGCTTGTATTGAAATTTAACTACTATTTGGAAAGAGCGGGACTACTCGCTTTTTGAGGCTCTGATCATATAAAAAACTTAAGCTATTAGATGAAAACATATGTACGGTTACACACATAGTTTAGCTCCTAAATTTTCTGTATCTCCTCAACATCTCAGATCTCTACAGTTTTAATGTTCCTTGTGATTTTTTTTTTGTTTTGTTTCAGATTTCTGGAAAGTTATTTTCTGATTCTGTTCCTCGACGAAGTTCGAGACTCTCAGGCGATGCAAGTGTAAATGCAAATCCTAATACAACAGCTGTTTCTGGAAATGGAACTAGTTCCTCTTCTAAGCATCTTGGTGGGTCAAAACATAGCTCAAATGCATTTCGTTCTGTGACAGTTCGCAAGGGACAACCATGGGCCAATGAAAACATAGATGAAGGTGATGAATCTTTATTTATAGCACTGTTTGATATAAGTGTCTTTGAGGAATGTTAAACTTCATAAAGACTATAGTTTTGAGGAGTGTTGTCCTTCATATATGTTTTAAGATGCATCCTATCTGATGAAATTATATCTGTTTTATCTAATACTCTATGCTGCCGCATTTTGAAAAAGAGATTATAAAACCATAATTATCAATCCTGAATAGCGGCGTAGAGTAGTCTTCCCCAAAGGATGACTTCTATTTTATTAATTTTTTATATAGTAAAAATTCAGATTTGGGGAGGCACACTCCATGCAAGGCCTAGGAAAACTACCAGTGTTAACGTGGATTTGCAATGAAATTCACGTATAGCCTACCAAGTGGGGAATTCAGATGACTGCTATTGTGAAAAATAGCTGCTTAAAATGAATGATTTATACTATACACAAATAGCTGCTTAAAAATAAAAGTTGGCCCAGAATTAAAAGCATATCATTAATATTCAAAAGTTGTATTCTACAGCGTTGTCAACCACTGTAGTGCAGCAGAGCAGCCCCTGGCCTAGAACTTGCAGTAAGCAGTTCAGTGTAGCGTCCAAATGCATGTCTGGACCACTCATAAGAGAAATCCAAAAAATTTAAACATGAGGGCTTTTGATTGGTGTATTGTAGGAATTATGCAATTAAATAACATCATAACAGCATTCTTCTTCTCTTCTCATTCTGTCTCGCTTATGCTGTCATATTTCAACCTTTCACTGGTCAGTCATAGGTCGTTGGTGAGTTTATAAGTATATTGTAAAAATAAATTATATAAACTGTAAAATTTTTGAAATAGCTGGGATCCAGTTATCCACTATCTCCCTACGACGTTTGTGGGGTTCGGCTGCTACGTTTTGCGATTCAGGATTTGATAACACCACTGTTCTAAACACTCATTTGATAGGAACCTGAATTAAAAAGAATAAAATGTGTTATTGATTGGAAAACGGGAGAGAAAATGTATTACAATACAAGAGGATCTCTCCTGTAACTCTCAAGCAGTGCTCCTCAGAGAAATTTGGAATTTCCTTTGCCCAAGCCCAAAGCCTAAGATATACTCATAACACCAACTGACTTCCTTTTTCCCTCTCACTACCAGTCTTAATGAGGATAACACCACTTCGATACCTAACATAGTATTAATTCTAACCTTGTACTATGTATTCTGATTATCTAAATCAAGTACTGATGTCATACTAATAGTTCAAGCTCTATGAATTTATTAAGGATCCTAACATAGTATTAATTCTAATATTCTAATACAAAATATTTCCAAGCAGTTATTTGCGAATACTTAATGAGTCCCCATTCTGTTATCTTCAGGAAATCATAATGACATTCTAGATGATTCTCGTTTAAATATTACATCAACAACTTCTACTTCCTCGTCTACCATGGAAGCTAAATCTTATGAACAGGAAGCAGCAAATATTCCAGTTGGTGGACAAGTATTAAGTAGCTCAAAAGTCTTCACCGGTGCTTCTGAGATACTGACCCTTCTAAGAGTTCTTGGTGAAGCTTTTAGACTTGCCTGCTTGTATAAGTGCCAGGTATTAATTAACCATTGCTTTCGCAGAAAAGATGTTTATGATTTATACTCATGTACAATTTACTATTTTTTTAATAATGGATATGAAAAGGGTAAAATGAAATTACTAAATACTTTGTTGTTGATTGCATCCAGTTTTCTAATATGATTTCATTGTTGGTACAGGATGCACTGGAAACTTATCAGAAACTTCCACCTAAGCATTACAACACTGGCTGGGTTCTTTCCCAGGTAATATTGGTTGTCTAACTAGCATTCTCTGGTCTTTTATAGGAATTCTTGCTATGCGTGGTTGTCAAAACTCTCACTTAACTCCTAGAATCATACAAGTTTAGGACCTAAGTATGAAAATCGAGTAAGTTCGCTTACAAATTTGTGTGTGAACTCAAGTAGACTCGCATAGAATTGTACGTTTATGAACGGTTAAAAGAGTCTACAACATAATGGCTAAATTGAGTGATTCTTTGGGTGTGTTTGTTACATGGAATGAAAATGTATTCCCAGGATTAACTTTCCTAGGAATGTTAGAGTGGGAATTTTATTCCTAGGAAAGTTTGATAAAAGTGTTTGTTTGATGATTTGAATTCCTGGGAATTCTTTTTTAAAGCCGTGATATAATTTATTAAAATACCCCTACTGTGTAAAACATATGTCTCCTCAATTTTCTCTCTATTTTTTTTCTTCTTCAAAGCATCGAATAATCAAACTAACGGATTTGATAATTTTAATTTATTATACACCAATTCATCCATGTCTATGTACTGTTACTGATACAATCAGAATCACATGAGTTTTGTTAAGTACTAATTGAATTATCCACCTTGAGTATTACAAGTGTGTAATTGTGTAATTTGTTGCAAAACCTGTGTAAAGGCAAGAAGAAAATGTGGCACATAAATAGGTAGAAACGTGGGATGCCATGCAGTTACAAGGGGTAGAAATGAACTTTTGTGATATTAATGGAGGTTAACTGCTGGGAATAAGTCATTCCCATCCTTTGTGCTGGGAATAAAAAATGGGATAATATAGTTGAAAATAATGACCGGGTATAATTAATTCCTTGGAACCTTTTTGTATGCATGTGTACCAAACATTGGAATAAATGATTCCCATCTTACATTCCCGGGAATTTAATTTGTAGAGGGGAAACAAACGCCCCCTTTGATTTTTAGAAAACCCAAAATGTAACAGCTAAATGATAAGTCTTTGTAGTGCATTAAACATTAACCTGACAGTTGTAGCACTGGACTCAACAGAAGCATCTAACATCCGAATGTGAACCCCTCTGCAAAGGAGGCAAACAAAGTTGTATTAGTCTCAACCTCGTAGTTCCCAACCGGAATGAAGTCACAGACCAGAAAACATGAACTCACCAATCTTTGCAATTTTGTAATAAACCCAACATGTCAAAGTGATGAATGGACCCGACTCTAATGAGTTGAAAATTAGCTCTTCCTAGATGGATCCAGCTCCAACAGAGGGAAGTTTAGTCTGGTCCAGTTGTCCATTATTATGTGCATGCAATGTGTTGTCCCACTTGTCCAATGCTTAAATTCAACTTTTTTATCAGAAAATTGAAAATGGTAAGGATTGTACTCTAGAACAGTTAACCATAGCCCATAGAGGCATGTATTACATGTCATGAACTAACTATTCCAAAATCTTAAGCTATTAGGTAAATATAATATTTTTTTATATAATATGATATGATAATAAGATGGTCTTTGTGCTAGAGTAGAGATTCTTACAGGTGCATATCACTGACAATCTGTTATGATACTTGGATGTTTTAAGCAGGTAGGAAAAATGTACTATGAATTTGATTATTTAGAAGCTGATCGGGCTTTTGGTCTTGCTCGTCAGATTACACCTTATAATTTGGAAGGAATGGATGTATACTCAACAGTCCTTTATGTGAGTTTATATTATATTTTATCAACTTTTAGAGTGCAAGTATTAACACTAATACCTTTTTTTTTTCCTTAACTGTTTAACTTACAAGTACTTAAAGAAAAAGGAAAAGTGAGAACAATGTTTGTATAATAGAATATAATTTTGATACATGGTAGTGGAAACTAGGCTTAGGTTTCGGCACAGAGAGAAGACATGTAGATACTGTAGTAACGAGAGTAGATCAGATGAACGACAGTCAGATGGCTAGAGGCAGAGGTCAGATGAATGATAGTCAGATCACTAGAGGCAGAGGTAGACCTATAAAACTATAAGAGACACTATTAAGAAATATTTAGATATTAATGAATTGGATCGAAATATGGTTTACGATAGAACAGTATGGTGTACTTTGATCCATGTAACCAACCCCACTTAATGGGATAAGGGTTAGCTGTTTTTTTCTTTTTTTCTTTTGAGGGGATTGTTGTTCTTGTTGATTCTGTAACTGACTAACCCCTATTTAGGCTAATAATCCTAAATTAACAAGGAAACAAGTCATGAATTTTGACGAAATGTGAAAACCATTCTTAAAAGATCACTGAAGATGTTCTTAAACATAAAAATTTGAATAACGCAAGTGATGTGTTTTTCTCTGGAGCCTTTAGGATTTATGGTTGATTTAGTGGTTCATGCATATCTTTGTGATAGTGAAAGCTTAAGCTAGGGAAAGTTCTCCTTTACCTAAGGAGTTGTTGACATACCCCGAAACTTGATATTTTTTCTTGAAGAAGAAAAAAAATCGGATACATTGTAACTCATCATTAGACATGAACTCGATACATATATTTTGTAACAATTTAAGACATAGAATTCCATCTATAATCACTCACAATATTAAAGCCTTTAGGATATATGGTTGATGTGGCTATTGAAACCTCTTGATACAGATGATATTCTTAAACATAAAAAATGAATAACACAAGTATGTGTTTTTCTCTGGAGCCTTTAGGATTTATGGTTGATGTGGCTATTAAAGCCTCTTGATACGGAAATCATGCCATTGTTAAAACCTTGTGAATTGACGGTACCAGGAGTTGATGGATAATCCTTAGAGGAAAATTAGATCCACTTTCTTGTCTGTTTCAATAATTTTGGAGGAAAATATTCTAGTTAATGCTTGCAACTAAGGATTCTGTGATTTTCCGAAACTAGTCTACAAATGACCAAATATTCTAGTTAATGCTTGCAACTAAGGATTCTGTGATTTGCTGAAACTAGTCTACAAAATATTTTGGAAGATTAATGTGTGGCAATAATCTTTTATAGCTTTATTTTTGAACAATAATCTTTTATAGCCATACTTCGTTGTAGCATTTGTTTAGCCTCCTGCTTCGTTTTATGCTTAAACTTTAAATGCATTCCTGCCATCTTACTGCTTGACGGAAGACTAATTTATCTTTGGTTGTAGCATCTAAAGGAAGATATGAAGTTAAGTTACCTGGCTCAGGAACTGATACAAACTGATCGCTTAGCTCCTCAATCATGGTAGGCTTCTATGTAACTATTACATCTCTTTGTGCATGTCCATGAGTGCTTGAGCTGTGAGCCAAAATTTCTGTATGTTTGCGAATTAATGCATTTGTTTTCAGGCCAACATCACATACCAGTTATATGTGATACATTAATAGACCTATTACCTACTTTTATTTATTTATTTGTTTGTTTTTAAGGTCTTTGGCTGCCCTTTTGTAAATTTTAGTATTGTCATATCTGAGATATCTGTTTTCAAAGCATTGTTACTAAATATACTTATCATCATAACATTGCTTTCTACTTCAGAACCACAGGAATGTAATTTTGGATAATTAGAGTTTGAGTTGAAACTTGTTTTAATTTTTTTTAAAGTTCTCCCGTACTTAGGTGTTCTATTCTGTTTATTACAATTTATCCTGGTCTATGATTAATTTTGAATGCCCTGTCAGGTGCGCGATGGGCAATTGCTACAGCCTGCAGAAAGATCATGAAACTGCACTGAAAAATTTTCAACGAGCTGTGCAACTAAATCCCAGATTTGCATATGCGCACACCCTTTGTGGACATGAGTATGAACATCATCTTACCAGAATGTTATAATTCGTGAGAATTGGTGTCCAGTATGAAGCGATTGTTGTCAACCTATACTAAAATCCTACTTTAGTACTTGTTAAGATTTTTGAGGGAAAAATTGATAGTAAATCACTCAGATAGAGTTTTATTTTAGAGGATAATTTGCAGTTTAAAACTGGCAAAGAGACATAGAAGGTTGTGGGAGTTGGTTAACTTTTAGAGGGGAAGTGCCTCCATATTCCATTATTGATGGTTGTTTTTGAGGCCCTGGTTGTATTTGGGAAAGGGAATAAACACTGATTACAGTTCTTGCATTCTTTGTATTTTCCTTTCTTGTTTTCTCAATTCATATCGTTGATTTATCAGGAGCTTTTTAAGACCTTTTAATTTGTTGCCCCTCATAGGTATGTTGCTCTAGAAGATTTTGAGAATGGAATCAAATGCTACCAGAGTGCACTTAGGGTTGATGAAAGGCATTACAATGCTTGGTATGGACTTGGAATGGTGTATCTTCGCCAAGAGAAGTTTGAGTTCTCCGAACACCATTTTCGAATGGCTTTCCAAATTAATCCATACTCATCTGTTATATTGTCATACCTTGGTACTGCTTTGCACGCTTTAAAGGTTGATCTCTTGCTGCACTGATTGTAATGCTGCAAATAAGAATTACATTTCTTCTGCTTTCGTTTTGTATTCTAAACTGGTGCTATCTTCCATAATTTGACAGAGAAGTGAGGAAGCACTAGTGGTAATGGAGAAGGCTATTATGGCAGATAAGAAAAATCCTGTTCCAATGTATCAGAAGGCCAATATACTAATGAGCTTGGAAAAATTCGATGAGGCTTTGGAAGTCCTAGAGGAGCTTAAAGAGTATGCTCCCCGCGAAATTAGTGTCTACGCTTTGATGGGAAGGATCTATAAAAGGCGTAACATGCATGAGAGAGCAATGCTTCATTATGGTATTGCTTTGGATTTGAAACCTTCTGCAACAGATGCTGCTGCTATTAAGGTGATACAGTCGTTTTATCTAAACTGGTCAATAATGTTCACAATTACATTTACTTATCTAAATCTTTATTCCATCTGATTGGTTGTGCGAAAGTGAAAGTCGAGTTATTTACTATGTCCATATACTGTTGAATACCATGCTGGGAAGTGGCTATTGTCACTTTTTATGCGACTTATCTACTTTCATTTTTAACAGGCTGCCATAGAGAAATTACATGTACCGGATGAGATGGACGACAACTTGTAG

Protein sequence

>MS.gene43188.t1

MAQSRYLFAISCFQMNLLNEAEAALCPANEPSAEVPNGSAGHYLLGLIYRYTDRKKNAVHHFKMALSMDPLMWAAYEELCILGAAEEAVAFFGEAAALCIQKQYLNCSTSPKLHSSTENLVDTRHCVSEDASPRQSKFMQGLKDISGNHHGAPVLGGTSGQPINSGFSNISFYNTPAPTMAQLSGVAPPPLCRNVQPNGSNMSTQSAESSPRSTVNSTIQAPRRKFVDEGKLRKISGKLFSDSVPRRSSRLSGDASVNANPNTTAVSGNGTSSSSKHLGGSKHSSNAFRSVTVRKGQPWANENIDEGNHNDILDDSRLNITSTTSTSSSTMEAKSYEQEAANIPVGGQVLSSSKVFTGASEILTLLRVLGEAFRLACLYKCQDALETYQKLPPKHYNTGWVLSQVGKMYYEFDYLEADRAFGLARQITPYNLEGMDVYSTVLYHLKEDMKLSYLAQELIQTDRLAPQSWCAMGNCYSLQKDHETALKNFQRAVQLNPRFAYAHTLCGHEYVALEDFENGIKCYQSALRVDERHYNAWYGLGMVYLRQEKFEFSEHHFRMAFQINPYSSVILSYLGTALHALKRSEEALVVMEKAIMADKKNPVPMYQKANILMSLEKFDEALEVLEELKEYAPREISVYALMGRIYKRRNMHERAMLHYGIALDLKPSATDAAAIKAAIEKLHVPDEMDDNL