AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene010239

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene010239.t1 MTR_5g062430 97.234 723 17 1 1 720 1 723 0.0 1460
MS.gene010239.t1 MTR_5g062320 91.262 721 62 1 1 720 1 721 0.0 1384
MS.gene010239.t1 MTR_5g062370 89.765 723 71 1 1 720 1 723 0.0 1353
MS.gene010239.t1 MTR_5g062650 85.675 726 98 3 1 720 1 726 0.0 1296
MS.gene010239.t1 MTR_3g074060 70.728 714 202 3 8 720 10 717 0.0 1087
MS.gene010239.t1 MTR_5g062370 88.245 587 66 1 1 584 1 587 0.0 1077
MS.gene010239.t1 MTR_5g030860 49.658 731 334 12 5 718 8 721 0.0 727
MS.gene010239.t1 MTR_1g106860 50.485 721 334 14 8 720 5 710 0.0 716
MS.gene010239.t1 MTR_2g034720 48.675 717 342 11 1 713 1 695 0.0 701
MS.gene010239.t1 MTR_1g087240 48.034 712 343 9 5 713 3 690 0.0 690
MS.gene010239.t1 MTR_2g008240 48.128 721 345 12 5 716 13 713 0.0 690
MS.gene010239.t1 MTR_7g109390 48.696 690 328 11 33 715 28 698 0.0 689
MS.gene010239.t1 MTR_4g094285 47.253 728 345 13 3 716 10 712 0.0 686
MS.gene010239.t1 MTR_6g028090 27.607 652 337 27 54 635 35 621 2.09e-41 160
MS.gene010239.t1 MTR_6g028120 27.864 646 343 30 54 635 16 602 4.95e-41 159
MS.gene010239.t1 MTR_3g462820 27.483 604 346 23 46 592 21 589 1.34e-40 158
MS.gene010239.t1 MTR_2g030000 27.417 631 331 27 54 610 37 614 8.12e-40 156
MS.gene010239.t1 MTR_6g028100 27.259 664 346 30 43 635 24 621 2.54e-39 154
MS.gene010239.t1 MTR_3g079750 26.372 656 352 28 54 641 35 627 2.84e-39 154
MS.gene010239.t1 MTR_7g086030 27.246 668 337 29 45 635 2 597 4.86e-39 153
MS.gene010239.t1 MTR_7g086030 27.477 666 334 29 47 635 29 622 1.27e-38 152
MS.gene010239.t1 MTR_6g028110 26.510 679 360 32 33 639 15 626 3.89e-38 151
MS.gene010239.t1 MTR_6g028110 26.596 658 344 31 54 639 36 626 6.27e-38 150
MS.gene010239.t1 MTR_5g069800 25.371 607 356 22 46 592 4 573 5.41e-35 141
MS.gene010239.t1 MTR_5g069740 24.916 598 358 20 46 592 4 561 3.67e-30 126
MS.gene010239.t1 MTR_7g086010 26.339 448 245 18 47 433 29 452 7.75e-24 105
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene010239.t1 AT1G78060 64.748 695 235 6 21 713 13 699 0.0 946
MS.gene010239.t1 AT5G10560 49.932 739 342 9 4 720 1 733 0.0 744
MS.gene010239.t1 AT3G19620 51.825 685 310 13 33 712 27 696 0.0 723
MS.gene010239.t1 AT5G09730 50.000 722 340 14 4 720 9 714 0.0 705
MS.gene010239.t1 AT5G64570 49.931 725 335 14 5 720 20 725 0.0 696
MS.gene010239.t1 AT1G02640 48.396 717 326 12 10 714 12 696 0.0 692
MS.gene010239.t1 AT5G49360 49.086 711 333 15 6 710 14 701 0.0 686
MS.gene010239.t1 AT5G64570 52.308 585 265 10 5 587 20 592 0.0 606
MS.gene010239.t1 AT5G64570 50.699 572 260 10 147 710 1 558 0.0 571
MS.gene010239.t1 AT5G09700 46.512 430 217 7 297 720 45 467 1.73e-123 379
MS.gene010239.t1 AT3G47040 26.852 648 376 26 43 638 6 607 4.17e-44 168
MS.gene010239.t1 AT3G47040 26.165 665 384 27 43 638 6 632 1.51e-41 161
MS.gene010239.t1 AT3G47010 25.848 619 377 25 44 610 8 596 1.98e-41 160
MS.gene010239.t1 AT3G47000 26.512 645 374 25 44 635 7 604 4.67e-41 159
MS.gene010239.t1 AT3G47010 25.687 619 377 26 44 610 8 595 9.63e-40 155
MS.gene010239.t1 AT3G47050 26.678 611 351 23 43 594 6 578 1.20e-37 149
MS.gene010239.t1 AT5G04885 25.118 633 368 24 45 614 28 617 5.39e-37 148
MS.gene010239.t1 AT5G04885 25.118 633 368 24 45 614 28 617 5.39e-37 148
MS.gene010239.t1 AT5G04885 25.118 633 368 24 45 614 45 634 6.01e-37 148
MS.gene010239.t1 AT3G47040 29.613 439 242 17 43 433 6 425 1.09e-34 138
MS.gene010239.t1 AT5G20950 25.229 654 357 25 54 639 33 622 5.82e-34 138
MS.gene010239.t1 AT5G20950 25.229 654 357 25 54 639 33 622 5.82e-34 138
MS.gene010239.t1 AT3G47000 29.108 426 234 16 44 421 7 412 1.14e-32 132
MS.gene010239.t1 AT3G47040 25.148 676 385 29 43 638 6 640 3.25e-32 133
MS.gene010239.t1 AT5G20950 27.818 417 230 16 54 421 111 505 3.98e-32 133
MS.gene010239.t1 AT3G47010 27.938 451 251 19 44 445 8 433 1.16e-31 129
MS.gene010239.t1 AT5G20940 25.692 650 341 26 57 634 42 621 5.91e-31 129
MS.gene010239.t1 AT3G62710 25.896 614 347 28 59 634 105 648 2.17e-30 127
MS.gene010239.t1 AT3G47010 25.459 436 284 19 193 610 5 417 2.26e-26 113
MS.gene010239.t1 AT3G47000 25.758 462 289 19 191 635 3 427 1.15e-24 108
MS.gene010239.t1 AT3G47050 27.467 375 214 12 43 374 6 365 1.41e-24 107

Find 173 sgRNAs with CRISPR-Local

Find 371 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAAAATTGGAGGGATTATT+TGG 0.068417 5.1:-48158283 MS.gene010239:CDS
AACAACCTTCGATGATTTAT+TGG 0.140120 5.1:+48158649 None:intergenic
AATAAGTGATTATGTAATTT+TGG 0.149333 5.1:-48158477 MS.gene010239:CDS
CACCAAACATAAACATATTT+AGG 0.158019 5.1:-48161940 MS.gene010239:CDS
TTCTAAGAAGCCGGTTATTT+TGG 0.173735 5.1:-48158354 MS.gene010239:CDS
GCTAAGAATAATGACAAAAT+TGG 0.212120 5.1:-48158296 MS.gene010239:CDS
TTTCCATTTCTACCTTTCTT+TGG 0.223144 5.1:+48156978 None:intergenic
TTTGAAGGTGGGAAACTAAT+TGG 0.232375 5.1:-48161818 MS.gene010239:CDS
AAATTGTAATCTGCACAATT+TGG 0.238972 5.1:+48160706 None:intergenic
ACACTTTACTGCTTATGATT+TGG 0.254536 5.1:-48161765 MS.gene010239:CDS
AAGCCCAAGGGATGACGTTT+TGG 0.261397 5.1:-48161964 MS.gene010239:CDS
TAGCCGAATTCGTAGACTTT+TGG 0.273287 5.1:+48157233 None:intergenic
TCTTGTCCTCTTCCCCATCT+TGG 0.274411 5.1:+48161914 None:intergenic
GTAAATACCCTTGGAGTTAT+AGG 0.279725 5.1:-48158680 MS.gene010239:CDS
TCAGGTTACTTTGCAAGATT+TGG 0.289491 5.1:-48160818 MS.gene010239:intron
CTGATTCGGTACCAAAGTTT+AGG 0.291395 5.1:+48162341 None:intergenic
TCGATGATTTATTGGCATTA+GGG 0.313442 5.1:+48158657 None:intergenic
AGATTAGTACCAATATTAAA+AGG 0.321384 5.1:-48158599 MS.gene010239:CDS
AACCGGCTTCTTAGAAGCTT+TGG 0.321699 5.1:+48158361 None:intergenic
CGAGTTGGTGGTAGCGAGTT+AGG 0.322220 5.1:+48162687 None:intergenic
TCTTTAGAGCATACTTGGTT+TGG 0.324036 5.1:+48158785 None:intergenic
TTCGATGATTTATTGGCATT+AGG 0.340003 5.1:+48158656 None:intergenic
CTTGTCCTCTTCCCCATCTT+GGG 0.341529 5.1:+48161915 None:intergenic
TTAAATTGTATGTAGGTGAT+TGG 0.341926 5.1:-48162019 MS.gene010239:intron
CTGCTTATGATTTGGATCAT+TGG 0.343564 5.1:-48161757 MS.gene010239:CDS
TACAAACTTGTTTCAGAGTT+AGG 0.348701 5.1:-48157098 MS.gene010239:CDS
TATCGTTCTGGATGTCTTGA+TGG 0.362209 5.1:-48158548 MS.gene010239:CDS
TGTACTATGCAACTATGAAA+TGG 0.363228 5.1:+48160778 None:intergenic
TTTGGATCATTGGAAGGGTT+TGG 0.364911 5.1:-48161747 MS.gene010239:CDS
GTACTATGCAACTATGAAAT+GGG 0.369757 5.1:+48160779 None:intergenic
TGGTGGAAGGGCTCTTGCTC+AGG 0.371596 5.1:-48158240 MS.gene010239:CDS
TCCCTAAATATGTTTATGTT+TGG 0.371836 5.1:+48161938 None:intergenic
AGCCAAACACATTATCGTTC+TGG 0.371977 5.1:-48158560 MS.gene010239:CDS
GCTCTTGCTCAGGTTGTGTT+TGG 0.377174 5.1:-48158230 MS.gene010239:CDS
TTGGACCAATTGTGCCATAT+TGG 0.378543 5.1:+48158804 None:intergenic
CAAAATTGGAGGGATTATTT+GGG 0.380232 5.1:-48158282 MS.gene010239:CDS
CACAAAATTACCAAAATAAC+CGG 0.381669 5.1:+48158344 None:intergenic
AGATTGAATGGCAGTGTTGC+AGG 0.383130 5.1:-48162410 MS.gene010239:CDS
GCAAATACTGGAAGCATGGC+TGG 0.385284 5.1:-48157029 MS.gene010239:CDS
CTTCAAGGAGATTCCTTTGA+AGG 0.385860 5.1:-48161833 MS.gene010239:CDS
ATTATTTGGGCTGGTTATCC+TGG 0.393707 5.1:-48158269 MS.gene010239:CDS
GTTGAGATTGCAGAAGAGTA+AGG 0.394117 5.1:+48162598 None:intergenic
ACCAAACATAAACATATTTA+GGG 0.398770 5.1:-48161939 MS.gene010239:CDS
CAAACCTAGTCTTATTCTAA+TGG 0.402033 5.1:+48158850 None:intergenic
TTGGTGGTGTCACAGGAGTA+TGG 0.402961 5.1:+48162635 None:intergenic
ATAAGACTAGGTTTGTTTGA+TGG 0.411429 5.1:-48158842 MS.gene010239:CDS
AATTGTGCCATATTGGAGTT+TGG 0.412583 5.1:+48158811 None:intergenic
GCTGGTTATCCTGGTGAACT+TGG 0.414067 5.1:-48158260 MS.gene010239:CDS
ACTCCAAGGGTATTTACTCT+TGG 0.414446 5.1:+48158686 None:intergenic
AATCCAACCAAACTCCAATA+TGG 0.420174 5.1:-48158818 MS.gene010239:CDS
AAACTCCAATATGGCACAAT+TGG 0.421759 5.1:-48158809 MS.gene010239:CDS
ACATTGGGAATTGCAAATAC+TGG 0.422016 5.1:-48157041 MS.gene010239:CDS
GTGTTTGGTGACTATAACCC+AGG 0.425278 5.1:-48158215 MS.gene010239:intron
GTGCCCAAAACGTCATCCCT+TGG 0.426062 5.1:+48161960 None:intergenic
TAAGACTAGGTTTGTTTGAT+GGG 0.430129 5.1:-48158841 MS.gene010239:CDS
AGGAATAATTTGAGTAGCTT+AGG 0.431887 5.1:+48157207 None:intergenic
GGTCCAAAAGTCTACGAATT+CGG 0.432398 5.1:-48157236 MS.gene010239:CDS
ATCCAGAACGATAATGTGTT+TGG 0.439275 5.1:+48158558 None:intergenic
AAGCCAAAGAAAGGTAGAAA+TGG 0.439382 5.1:-48156981 MS.gene010239:CDS
TCCTATGTAAGAGGACTTCA+AGG 0.442093 5.1:-48161848 MS.gene010239:CDS
CTCATTCTCATGTCTGTCAT+TGG 0.443342 5.1:+48157308 None:intergenic
TGCCCAAAACGTCATCCCTT+GGG 0.443887 5.1:+48161961 None:intergenic
TGGCTCTTTGAGAGATGGTA+AGG 0.444214 5.1:+48162576 None:intergenic
CTTCCTTTGATCCTAAACTT+TGG 0.447982 5.1:-48162352 MS.gene010239:CDS
TATGCTGTTTCCTATGTAAG+AGG 0.453127 5.1:-48161857 MS.gene010239:CDS
ATAAGTTCTTGCTGCTTACC+AGG 0.458334 5.1:+48158395 None:intergenic
AGTTACTAACCTTACTGATT+CGG 0.458447 5.1:+48162327 None:intergenic
AATTAGTTTCCCACCTTCAA+AGG 0.461085 5.1:+48161820 None:intergenic
ATGTCGATTTCTGTCACATT+GGG 0.462961 5.1:-48157056 MS.gene010239:CDS
ACATATTTAGGGACCCAAGA+TGG 0.464899 5.1:-48161928 MS.gene010239:CDS
AACCCTACCAGCTATTTCAC+TGG 0.466082 5.1:+48156954 None:intergenic
TTAGCAAAAGTAATATCAAC+AGG 0.467973 5.1:+48158314 None:intergenic
GCACGGTCGATTTGAGATAT+CGG 0.478301 5.1:+48158890 None:intergenic
CATATTTAGGGACCCAAGAT+GGG 0.480274 5.1:-48161927 MS.gene010239:CDS
GAGCCGTGACACAATGTCTT+TGG 0.481669 5.1:+48162556 None:intergenic
GACAGCTGGAGAAGATCCTT+TGG 0.489521 5.1:-48161891 MS.gene010239:CDS
CATGTCGATTTCTGTCACAT+TGG 0.490000 5.1:-48157057 MS.gene010239:CDS
GTCTTTGGCTCTTTGAGAGA+TGG 0.490844 5.1:+48162571 None:intergenic
AGGGTATTTACTCTTGGAAG+TGG 0.494590 5.1:+48158692 None:intergenic
CAAGGAGATTCCTTTGAAGG+TGG 0.495290 5.1:-48161830 MS.gene010239:CDS
GGTTATCCTGGTGAACTTGG+TGG 0.497246 5.1:-48158257 MS.gene010239:CDS
GGTGTTGCTAATGCTGGTAA+AGG 0.497484 5.1:-48162437 MS.gene010239:CDS
GTATAGAATGAGTGGTTGAT+TGG 0.501080 5.1:+48157144 None:intergenic
GTGTTGCTAATGCTGGTAAA+GGG 0.502533 5.1:-48162436 MS.gene010239:CDS
GGTTACTTTGCAAGATTTGG+CGG 0.503836 5.1:-48160815 MS.gene010239:CDS
CTGTTTGTGAAGCCAAAGAA+AGG 0.504938 5.1:-48156990 MS.gene010239:CDS
ATCCTGGTGAACTTGGTGGA+AGG 0.508629 5.1:-48158253 MS.gene010239:CDS
TTATGATTTGGATCATTGGA+AGG 0.509513 5.1:-48161753 MS.gene010239:CDS
AAGAATAATGACAAAATTGG+AGG 0.510297 5.1:-48158293 MS.gene010239:CDS
ATGAGAGCTGATCCATCATC+AGG 0.511303 5.1:-48157290 MS.gene010239:CDS
GTAGAAACGGTAGGTTCTAC+CGG 0.511605 5.1:+48157262 None:intergenic
GTACCAAAGTTTAGGATCAA+AGG 0.513099 5.1:+48162349 None:intergenic
CGGTATACCGAGTCGAGGAA+TGG 0.513844 5.1:+48162490 None:intergenic
CTACCGGGATAGCCTGATGA+TGG 0.517596 5.1:+48157278 None:intergenic
AGAGATGATTTAGAGTTGCC+TGG 0.517802 5.1:-48158413 MS.gene010239:CDS
ACATCTGCTACAGCATCCTC+TGG 0.519507 5.1:+48160146 None:intergenic
TGGTTGATTGGTTGATGTGA+AGG 0.520554 5.1:+48157156 None:intergenic
TGCCAAAGCTTCTAAGAAGC+CGG 0.524198 5.1:-48158363 MS.gene010239:CDS
CAGCTTCAAGAGCAACGTCT+AGG 0.524868 5.1:+48158759 None:intergenic
AAGTGGGTTGGTGGTGTCAC+AGG 0.526196 5.1:+48162628 None:intergenic
TGTGCTTACAACCGTGTCAA+TGG 0.530376 5.1:-48160733 MS.gene010239:CDS
ACTTTGGTACCGAATCAGTA+AGG 0.534412 5.1:-48162336 MS.gene010239:intron
ATACCGAGTCGAGGAATGGC+AGG 0.534851 5.1:+48162494 None:intergenic
TTGCACGGTGTTGCTAATGC+TGG 0.534873 5.1:-48162443 MS.gene010239:CDS
AAAGTCTACGAATTCGGCTA+TGG 0.537086 5.1:-48157230 MS.gene010239:CDS
AGAATCATATATGATAATCA+AGG 0.537334 5.1:-48160182 MS.gene010239:CDS
TCCTGGTGAACTTGGTGGAA+GGG 0.537602 5.1:-48158252 MS.gene010239:CDS
TCTTGGAAGTGGGAGAATTG+AGG 0.537861 5.1:+48158703 None:intergenic
CAGCAGTAAGAATAACTTGA+GGG 0.540873 5.1:+48162375 None:intergenic
GGTAAAGGGATAAGATTGAA+TGG 0.541496 5.1:-48162422 MS.gene010239:CDS
GATCCATCATCAGGCTATCC+CGG 0.542828 5.1:-48157281 MS.gene010239:CDS
GGCTTCACAAACAGCAACAC+AGG 0.545539 5.1:+48156999 None:intergenic
GTGCCATATTGGAGTTTGGT+TGG 0.546323 5.1:+48158815 None:intergenic
ATTGGAGGGATTATTTGGGC+TGG 0.549271 5.1:-48158278 MS.gene010239:CDS
CTTCCAAGAGTAAATACCCT+TGG 0.550798 5.1:-48158689 MS.gene010239:CDS
AAGGAGATTCCTTTGAAGGT+GGG 0.551664 5.1:-48161829 MS.gene010239:CDS
TTTGACGGAAATGAAGCTGT+AGG 0.553143 5.1:+48157187 None:intergenic
GGAAGAGGACAAGAGACAGC+TGG 0.554566 5.1:-48161905 MS.gene010239:CDS
GCCCTTCCACCAAGTTCACC+AGG 0.555057 5.1:+48158251 None:intergenic
AATGGTGAATAGATTGTGTA+GGG 0.557476 5.1:+48158868 None:intergenic
TTTCATAGTTGCATAGTACA+AGG 0.561138 5.1:-48160775 MS.gene010239:CDS
GCAAGAGGAGTATACAATGC+TGG 0.561312 5.1:-48161989 MS.gene010239:CDS
AATATTGGTACTAATCTACA+AGG 0.562148 5.1:+48158605 None:intergenic
AGGGACCCAAGATGGGGAAG+AGG 0.563005 5.1:-48161920 MS.gene010239:CDS
TCGGTATACCGAGTTATCAA+TGG 0.563582 5.1:-48162478 MS.gene010239:CDS
TCCTTGAAGTCCTCTTACAT+AGG 0.571602 5.1:+48161847 None:intergenic
GCTCTTGAAGCTGCAAGAAG+TGG 0.571675 5.1:-48158749 MS.gene010239:CDS
CAAATACTGGAAGCATGGCT+GGG 0.572025 5.1:-48157028 MS.gene010239:CDS
TAATGGTGAATAGATTGTGT+AGG 0.575658 5.1:+48158867 None:intergenic
TGGACCTGTGTAGAAACGGT+AGG 0.576368 5.1:+48157253 None:intergenic
TATGATTTGGATCATTGGAA+GGG 0.576733 5.1:-48161752 MS.gene010239:CDS
CATTGTGTCACGGCTCACAT+TGG 0.582035 5.1:-48162549 MS.gene010239:CDS
TACAATGCTGGACAAGCCCA+AGG 0.582788 5.1:-48161977 MS.gene010239:CDS
AGGTACATGAGTTTGTGAAT+CGG 0.586824 5.1:+48162658 None:intergenic
GTAGCAGATGTACTTCAAGC+TGG 0.587190 5.1:-48160134 MS.gene010239:intron
ACTCTGAAACAAGTTTGTAA+CGG 0.590668 5.1:+48157102 None:intergenic
CATTAGGGCCTATAACTCCA+AGG 0.594911 5.1:+48158672 None:intergenic
TACTATGCAACTATGAAATG+GGG 0.595239 5.1:+48160780 None:intergenic
TCATCCCACCATTGATAACT+CGG 0.596415 5.1:+48162470 None:intergenic
GGGTATTTACTCTTGGAAGT+GGG 0.605290 5.1:+48158693 None:intergenic
AGAATAATGACAAAATTGGA+GGG 0.611667 5.1:-48158292 MS.gene010239:CDS
AGAACCTACCGTTTCTACAC+AGG 0.612051 5.1:-48157257 MS.gene010239:CDS
GTGAATCGGCATGAACGAGT+TGG 0.622493 5.1:+48162672 None:intergenic
GTATACCGAGTTATCAATGG+TGG 0.623082 5.1:-48162475 MS.gene010239:CDS
TAATGCCAATAAATCATCGA+AGG 0.625014 5.1:-48158654 MS.gene010239:CDS
GCTCCTGCCATTCCTCGACT+CGG 0.625159 5.1:-48162497 MS.gene010239:CDS
TGAATAGATTGTGTAGGGCA+CGG 0.634890 5.1:+48158873 None:intergenic
ATTGGATCAAAGTCAAGAGA+GGG 0.636383 5.1:-48158447 MS.gene010239:CDS
AATTTGGAACTCCATTGACA+CGG 0.638503 5.1:+48160722 None:intergenic
ATAGTACAAGGACGGTCTAG+TGG 0.639813 5.1:-48160763 MS.gene010239:CDS
CAATGTGACAGAAATCGACA+TGG 0.640085 5.1:+48157058 None:intergenic
TAAAATCAGGTATATTACGT+CGG 0.641041 5.1:-48160219 MS.gene010239:intron
AATTGCAAATACTGGAAGCA+TGG 0.643013 5.1:-48157033 MS.gene010239:CDS
GTGATTGGAACTGAGGCAAG+AGG 0.644411 5.1:-48162004 MS.gene010239:CDS
AATCGGCATGAACGAGTTGG+TGG 0.645435 5.1:+48162675 None:intergenic
ATAGTTGCATAGTACAAGGA+CGG 0.645766 5.1:-48160771 MS.gene010239:CDS
TAGAAACGGTAGGTTCTACC+GGG 0.648311 5.1:+48157263 None:intergenic
TTCACCATTAGAATAAGACT+AGG 0.657936 5.1:-48158854 MS.gene010239:CDS
GATTGGATCAAAGTCAAGAG+AGG 0.658616 5.1:-48158448 MS.gene010239:CDS
ATTAGGGCCTATAACTCCAA+GGG 0.662705 5.1:+48158673 None:intergenic
GAGCCAAAGACATTGTGTCA+CGG 0.665561 5.1:-48162559 MS.gene010239:CDS
TTGGTACTAATCTACAAGGA+CGG 0.668059 5.1:+48158609 None:intergenic
TTACTTGACAAAGCATGCAA+AGG 0.671287 5.1:-48158936 MS.gene010239:CDS
TATACCGAGTTATCAATGGT+GGG 0.671346 5.1:-48162474 MS.gene010239:CDS
GCAGCAGTAAGAATAACTTG+AGG 0.673303 5.1:+48162374 None:intergenic
TATGTAGGTGATTGGAACTG+AGG 0.676313 5.1:-48162011 MS.gene010239:intron
ATATTTAGGGACCCAAGATG+GGG 0.678025 5.1:-48161926 MS.gene010239:CDS
TGGTGGGATGAAGCTTTGCA+CGG 0.695540 5.1:-48162458 MS.gene010239:CDS
ACAATGCTGGACAAGCCCAA+GGG 0.700553 5.1:-48161976 MS.gene010239:CDS
TCAGGGATGGATGTAGAGTG+TGG 0.708529 5.1:-48158962 MS.gene010239:intron
TAACTCGGTATACCGAGTCG+AGG 0.711678 5.1:+48162485 None:intergenic
GTGGTGTCACAGGAGTATGG+AGG 0.712071 5.1:+48162638 None:intergenic
ACTATGCAACTATGAAATGG+GGG 0.744455 5.1:+48160781 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTTATTTATTTTATAT+TGG - chr5.1:48161846-48161865 MS.gene010239:CDS 0.0%
!!! ATTTTTATTTATTTTATATT+GGG - chr5.1:48161847-48161866 MS.gene010239:CDS 0.0%
!! ACAAAATTGAAATAATTATA+AGG + chr5.1:48159088-48159107 None:intergenic 10.0%
!! ATATTGTTTAATTCTTATAA+GGG + chr5.1:48159240-48159259 None:intergenic 10.0%
!! CAAAATTGAAATAATTATAA+GGG + chr5.1:48159087-48159106 None:intergenic 10.0%
!! TATATTGTTTAATTCTTATA+AGG + chr5.1:48159241-48159260 None:intergenic 10.0%
!!! AAAATGTAAATTTTAAAAGA+AGG - chr5.1:48159211-48159230 MS.gene010239:intron 10.0%
!!! AAATATGAGATTTTATTTTT+TGG - chr5.1:48159632-48159651 MS.gene010239:intron 10.0%
!!! AATATGAGATTTTATTTTTT+GGG - chr5.1:48159633-48159652 MS.gene010239:intron 10.0%
!! AACTAAAATACAAAATGATA+AGG + chr5.1:48160311-48160330 None:intergenic 15.0%
!! AATATTTAGTTAAGCAAAAA+GGG - chr5.1:48161814-48161833 MS.gene010239:CDS 15.0%
!! ATCTTAATTAAATTGTATGT+AGG - chr5.1:48157667-48157686 MS.gene010239:intron 15.0%
!! CACATAATATGTTAAAAAAA+TGG - chr5.1:48161540-48161559 MS.gene010239:intron 15.0%
!! TAATATAATTAGATCTACAT+TGG - chr5.1:48160138-48160157 MS.gene010239:CDS 15.0%
!! TAATATTTAGTTAAGCAAAA+AGG - chr5.1:48161813-48161832 MS.gene010239:CDS 15.0%
!! TATTGTTTAATTCTTATAAG+GGG + chr5.1:48159239-48159258 None:intergenic 15.0%
!!! AATAAGTGATTATGTAATTT+TGG - chr5.1:48161216-48161235 MS.gene010239:intron 15.0%
!!! AGTTTAAAGATTTTAGTTTT+TGG - chr5.1:48157462-48157481 MS.gene010239:intron 15.0%
!!! CTTATTTATAAGAGAAATTT+TGG - chr5.1:48158216-48158235 MS.gene010239:CDS 15.0%
!!! GATTAATAAGAATGATTTTT+TGG - chr5.1:48159448-48159467 MS.gene010239:intron 15.0%
!!! TATTAAATCAACTATTCTTT+TGG + chr5.1:48158525-48158544 None:intergenic 15.0%
!! AAATATGTAGCTTCAAAAAA+AGG + chr5.1:48159376-48159395 None:intergenic 20.0%
!! AAATGTAGAAATGATATTTG+AGG - chr5.1:48158154-48158173 MS.gene010239:intron 20.0%
!! AACTATTATTACTCAACTAA+TGG - chr5.1:48162284-48162303 MS.gene010239:intron 20.0%
!! AATTCAAAATGTGAAACAAA+AGG + chr5.1:48158677-48158696 None:intergenic 20.0%
!! ACCAAACATAAACATATTTA+GGG - chr5.1:48157754-48157773 MS.gene010239:intron 20.0%
!! ACTATTATTACTCAACTAAT+GGG - chr5.1:48162285-48162304 MS.gene010239:intron 20.0%
!! AGAATCATATATGATAATCA+AGG - chr5.1:48159511-48159530 MS.gene010239:intron 20.0%
!! AGATTAGTACCAATATTAAA+AGG - chr5.1:48161094-48161113 MS.gene010239:intron 20.0%
!! ATATACTTGAAAAAGTTATC+TGG + chr5.1:48162256-48162275 None:intergenic 20.0%
!! ATTATCTAACTCTATATCAA+TGG - chr5.1:48159671-48159690 MS.gene010239:intron 20.0%
!! ATTTCTCTTATAAATAAGAC+CGG + chr5.1:48158214-48158233 None:intergenic 20.0%
!! CTTAAAATGAATTTCAAACA+TGG + chr5.1:48157400-48157419 None:intergenic 20.0%
!! GAAATTAAAAAATGACAAAG+AGG - chr5.1:48158547-48158566 MS.gene010239:CDS 20.0%
!! GTTAATAGATGTATAAACAA+AGG + chr5.1:48159600-48159619 None:intergenic 20.0%
!! TAAAAGAGATCTTAAAAAGA+GGG - chr5.1:48160181-48160200 MS.gene010239:CDS 20.0%
!! TATACTTGAAAAAGTTATCT+GGG + chr5.1:48162255-48162274 None:intergenic 20.0%
!! TCAACGAAATTTAATGTATT+TGG - chr5.1:48158239-48158258 MS.gene010239:CDS 20.0%
!! TGAAAAACATTGTTTCATAA+AGG + chr5.1:48159277-48159296 None:intergenic 20.0%
!! TTAAAAGAGATCTTAAAAAG+AGG - chr5.1:48160180-48160199 MS.gene010239:CDS 20.0%
!! TTTAGAAATAATGCATGTTT+AGG - chr5.1:48160591-48160610 MS.gene010239:intron 20.0%
!! TTTGACCTAAATTAAAACTA+AGG + chr5.1:48160505-48160524 None:intergenic 20.0%
!!! AGAAAATAGTCTTCATTTTA+TGG + chr5.1:48162083-48162102 None:intergenic 20.0%
!!! AGTATTCTATTTAATTTGCT+TGG + chr5.1:48159756-48159775 None:intergenic 20.0%
!!! AGTTGAGTAATAATAGTTTT+AGG + chr5.1:48162282-48162301 None:intergenic 20.0%
!!! ATAAGCAATGTTTTAAATTG+TGG + chr5.1:48162187-48162206 None:intergenic 20.0%
!!! ATTTGCCTTAGTTTTAATTT+AGG - chr5.1:48160497-48160516 MS.gene010239:intron 20.0%
!!! CTAATTGAAAGAAAGTTTTT+AGG + chr5.1:48159858-48159877 None:intergenic 20.0%
!!! GATTATGTAATTTTGGTTAT+GGG - chr5.1:48161223-48161242 MS.gene010239:intron 20.0%
!!! GTATTTTGATGAAATCTTTT+GGG + chr5.1:48162366-48162385 None:intergenic 20.0%
!!! GTGTAAAATCCTTTTAATAT+TGG + chr5.1:48161106-48161125 None:intergenic 20.0%
!!! GTTTTATATGTTTACCTTTT+AGG - chr5.1:48160057-48160076 MS.gene010239:intron 20.0%
!!! TGATTATGTAATTTTGGTTA+TGG - chr5.1:48161222-48161241 MS.gene010239:intron 20.0%
! AAAAATGAAAGTAATGGTGA+TGG + chr5.1:48156981-48157000 None:intergenic 25.0%
! AAATTGTAATCTGCACAATT+TGG + chr5.1:48158990-48159009 None:intergenic 25.0%
! AACTTATTCTCTATCCTAAA+AGG + chr5.1:48160074-48160093 None:intergenic 25.0%
! AAGAATAATGACAAAATTGG+AGG - chr5.1:48161400-48161419 MS.gene010239:intron 25.0%
! AATATTGGTACTAATCTACA+AGG + chr5.1:48161091-48161110 None:intergenic 25.0%
! AGAATAATGACAAAATTGGA+GGG - chr5.1:48161401-48161420 MS.gene010239:intron 25.0%
! AGACAAAAATGGAATTTCAA+TGG - chr5.1:48159026-48159045 MS.gene010239:intron 25.0%
! AGTAACCTGAATTATTAGAA+CGG + chr5.1:48158865-48158884 None:intergenic 25.0%
! ATCACGAGAATTAAAAAAGT+TGG - chr5.1:48160003-48160022 MS.gene010239:intron 25.0%
! ATGTATAAACTTCGTAGATT+TGG - chr5.1:48161766-48161785 MS.gene010239:CDS 25.0%
! CAATTATCTTTAGTCATGTT+AGG - chr5.1:48158491-48158510 MS.gene010239:CDS 25.0%
! CACAAAATTACCAAAATAAC+CGG + chr5.1:48161352-48161371 None:intergenic 25.0%
! CACAAGTACTATTATAATCA+AGG - chr5.1:48160680-48160699 MS.gene010239:CDS 25.0%
! CACCAAACATAAACATATTT+AGG - chr5.1:48157753-48157772 MS.gene010239:intron 25.0%
! CCAAACATTCTCTTATAAAT+AGG - chr5.1:48158298-48158317 MS.gene010239:CDS 25.0%
! CCTATTTATAAGAGAATGTT+TGG + chr5.1:48158301-48158320 None:intergenic 25.0%
! GAAGAGAAAAATGAAAGTAA+TGG + chr5.1:48156987-48157006 None:intergenic 25.0%
! GACAAAAATGGAATTTCAAT+GGG - chr5.1:48159027-48159046 MS.gene010239:intron 25.0%
! GCTAAGAATAATGACAAAAT+TGG - chr5.1:48161397-48161416 MS.gene010239:intron 25.0%
! GCTCTTACAAATTACAAAAT+TGG - chr5.1:48159135-48159154 MS.gene010239:intron 25.0%
! TAAAATCAGGTATATTACGT+CGG - chr5.1:48159474-48159493 MS.gene010239:intron 25.0%
! TAATAGTACTTGTGTATGTT+TGG + chr5.1:48160674-48160693 None:intergenic 25.0%
! TCCCTAAATATGTTTATGTT+TGG + chr5.1:48157758-48157777 None:intergenic 25.0%
! TGGATCAATCTTAATTATCA+TGG + chr5.1:48160389-48160408 None:intergenic 25.0%
! TGTTTACTAAATGATTGCAT+GGG + chr5.1:48161908-48161927 None:intergenic 25.0%
! TTAAATTGTATGTAGGTGAT+TGG - chr5.1:48157674-48157693 MS.gene010239:intron 25.0%
! TTAGCAAAAGTAATATCAAC+AGG + chr5.1:48161382-48161401 None:intergenic 25.0%
! TTTAACCATAAAACTTAGAG+TGG + chr5.1:48160413-48160432 None:intergenic 25.0%
! TTTCTCTTATAAATAAGACC+GGG + chr5.1:48158213-48158232 None:intergenic 25.0%
!! AATGTTTTTCACTCTATTGA+AGG - chr5.1:48159286-48159305 MS.gene010239:intron 25.0%
!! AGTAAGTTTTCTTTTCTCTA+TGG - chr5.1:48157991-48158010 MS.gene010239:intron 25.0%
!! ATTGTGTAATCAAACTTTTC+AGG - chr5.1:48160713-48160732 MS.gene010239:CDS 25.0%
!! CGAAGTTTATACATGTTTTA+AGG + chr5.1:48161760-48161779 None:intergenic 25.0%
!! CTTTTGCATCAAAATCAAAA+CGG + chr5.1:48157973-48157992 None:intergenic 25.0%
!! TAAAGTTCACTTTCACATTT+TGG + chr5.1:48159414-48159433 None:intergenic 25.0%
!! TATTTTATATTGGGAGACAA+GGG - chr5.1:48161856-48161875 MS.gene010239:CDS 25.0%
!! TTGTGTAATCAAACTTTTCA+GGG - chr5.1:48160714-48160733 MS.gene010239:CDS 25.0%
!!! CATTTTAGTTGTTTAAGTTC+TGG - chr5.1:48160265-48160284 MS.gene010239:intron 25.0%
!!! CTTGTTTTAATGTCTATCAT+TGG - chr5.1:48159820-48159839 MS.gene010239:intron 25.0%
!!! GATTTTTTGGTGTTAAAATC+AGG - chr5.1:48159461-48159480 MS.gene010239:intron 25.0%
!!! GCATATTTTGAATTTACCAA+AGG + chr5.1:48157821-48157840 None:intergenic 25.0%
!!! GGTATTTTGATGAAATCTTT+TGG + chr5.1:48162367-48162386 None:intergenic 25.0%
!!! GTCTTAATTTTTTCACATTG+TGG - chr5.1:48160439-48160458 MS.gene010239:intron 25.0%
!!! GTTATTTTGGTAATTTTGTG+CGG - chr5.1:48161352-48161371 MS.gene010239:intron 25.0%
!!! TATACATGTTTTAAGGATCT+TGG + chr5.1:48161753-48161772 None:intergenic 25.0%
!!! TATGTGTTTTTATCTGTCAA+TGG + chr5.1:48161526-48161545 None:intergenic 25.0%
!!! TTAACAAAAGTTGATGTATC+TGG + chr5.1:48158278-48158297 None:intergenic 25.0%
!!! TTATTTTATATTGGGAGACA+AGG - chr5.1:48161855-48161874 MS.gene010239:CDS 25.0%
AAACTAAACAAGCAAGAACT+TGG + chr5.1:48158628-48158647 None:intergenic 30.0%
AAAGAGATTATAGAGCTTAG+AGG + chr5.1:48160536-48160555 None:intergenic 30.0%
AACAACCTTCGATGATTTAT+TGG + chr5.1:48161047-48161066 None:intergenic 30.0%
AATGGTGAATAGATTGTGTA+GGG + chr5.1:48160828-48160847 None:intergenic 30.0%
ACAAAATTGGAGGGATTATT+TGG - chr5.1:48161410-48161429 MS.gene010239:intron 30.0%
ACACTTTACTGCTTATGATT+TGG - chr5.1:48157928-48157947 MS.gene010239:intron 30.0%
ACGAAACTAAAAGACAAATC+AGG + chr5.1:48158353-48158372 None:intergenic 30.0%
AGAGTCTAAAAATTCAGCTT+CGG - chr5.1:48161881-48161900 MS.gene010239:CDS 30.0%
AGGAATAATTTGAGTAGCTT+AGG + chr5.1:48162489-48162508 None:intergenic 30.0%
CAAAATTGGAGGGATTATTT+GGG - chr5.1:48161411-48161430 MS.gene010239:intron 30.0%
CAAATCCGTTCTAATAATTC+AGG - chr5.1:48158857-48158876 MS.gene010239:CDS 30.0%
CATTCTCTTATAAATAGGAC+CGG - chr5.1:48158303-48158322 MS.gene010239:CDS 30.0%
CTCTCAGAAAAATAAGTATG+AGG + chr5.1:48159945-48159964 None:intergenic 30.0%
GAAAACAGTCTTTATGTTCA+TGG - chr5.1:48162025-48162044 MS.gene010239:intron 30.0%
GAATTAATCATCCAAATCCA+AGG + chr5.1:48158025-48158044 None:intergenic 30.0%
GATTTGGATGATTAATTCAG+CGG - chr5.1:48158027-48158046 MS.gene010239:intron 30.0%
GTACTATGCAACTATGAAAT+GGG + chr5.1:48158917-48158936 None:intergenic 30.0%
GTGTTTACTAAATGATTGCA+TGG + chr5.1:48161909-48161928 None:intergenic 30.0%
TAATGCCAATAAATCATCGA+AGG - chr5.1:48161039-48161058 MS.gene010239:intron 30.0%
TAATGGTGAATAGATTGTGT+AGG + chr5.1:48160829-48160848 None:intergenic 30.0%
TACTATGCAACTATGAAATG+GGG + chr5.1:48158916-48158935 None:intergenic 30.0%
TATTTAATCACTGCAATGCA+GGG - chr5.1:48162317-48162336 MS.gene010239:intron 30.0%
TCGATGATTTATTGGCATTA+GGG + chr5.1:48161039-48161058 None:intergenic 30.0%
TGATCTAATATTTAGCGATG+AGG - chr5.1:48160221-48160240 MS.gene010239:intron 30.0%
TGATTTAGTCGATTAGATCT+TGG + chr5.1:48159987-48160006 None:intergenic 30.0%
TGTACTATGCAACTATGAAA+TGG + chr5.1:48158918-48158937 None:intergenic 30.0%
TTATTTAATCACTGCAATGC+AGG - chr5.1:48162316-48162335 MS.gene010239:intron 30.0%
TTCACCATTAGAATAAGACT+AGG - chr5.1:48160839-48160858 MS.gene010239:intron 30.0%
TTCATCAACGACATAAAACA+AGG + chr5.1:48158433-48158452 None:intergenic 30.0%
TTCGATGATTTATTGGCATT+AGG + chr5.1:48161040-48161059 None:intergenic 30.0%
TTCTCTTATAAATAAGACCG+GGG + chr5.1:48158212-48158231 None:intergenic 30.0%
TTTCATAGTTGCATAGTACA+AGG - chr5.1:48158918-48158937 MS.gene010239:CDS 30.0%
TTTCCATTTCTACCTTTCTT+TGG + chr5.1:48162718-48162737 None:intergenic 30.0%
! AAGACTGTTTTCTTTGAATC+TGG + chr5.1:48162017-48162036 None:intergenic 30.0%
! AAGAGTAAGGATTTTGTAAG+TGG + chr5.1:48157085-48157104 None:intergenic 30.0%
! AGAGTAAGGATTTTGTAAGT+GGG + chr5.1:48157084-48157103 None:intergenic 30.0%
! AGTTACTAACCTTACTGATT+CGG + chr5.1:48157369-48157388 None:intergenic 30.0%
! ATAAGACTAGGTTTGTTTGA+TGG - chr5.1:48160851-48160870 MS.gene010239:intron 30.0%
! CTGAATTATTAGAACGGATT+TGG + chr5.1:48158859-48158878 None:intergenic 30.0%
! GAAGACTATTTTCTATACGA+CGG - chr5.1:48162089-48162108 MS.gene010239:intron 30.0%
! GGGCATGGATATAATAATTT+TGG + chr5.1:48162235-48162254 None:intergenic 30.0%
! TAAGACTAGGTTTGTTTGAT+GGG - chr5.1:48160852-48160871 MS.gene010239:intron 30.0%
! TACAAACTTGTTTCAGAGTT+AGG - chr5.1:48162595-48162614 MS.gene010239:CDS 30.0%
! TATGATTTGGATCATTGGAA+GGG - chr5.1:48157941-48157960 MS.gene010239:intron 30.0%
! TTATGATTTGGATCATTGGA+AGG - chr5.1:48157940-48157959 MS.gene010239:intron 30.0%
! TTATGTCGTTGATGAATACT+TGG - chr5.1:48158437-48158456 MS.gene010239:CDS 30.0%
! TTGCAAATTTTCCTCACTAT+AGG + chr5.1:48160362-48160381 None:intergenic 30.0%
!! AAATCATCGAAGGTTGTTTT+AGG - chr5.1:48161049-48161068 MS.gene010239:intron 30.0%
!! ACTCTGAAACAAGTTTGTAA+CGG + chr5.1:48162594-48162613 None:intergenic 30.0%
!! CAAACCTAGTCTTATTCTAA+TGG + chr5.1:48160846-48160865 None:intergenic 30.0%
!! CTCATACTTATTTTTCTGAG+AGG - chr5.1:48159943-48159962 MS.gene010239:intron 30.0%
!! TTACATCATTTTTCGCAATC+TGG + chr5.1:48160121-48160140 None:intergenic 30.0%
!!! AAAGTTTTTAGGTTGTACTC+AGG + chr5.1:48159847-48159866 None:intergenic 30.0%
!!! ACTTTTAAGTTGCATTGACA+TGG + chr5.1:48162162-48162181 None:intergenic 30.0%
!!! ATTTTAGTTATGACTTTGCC+AGG - chr5.1:48160322-48160341 MS.gene010239:intron 30.0%
!!! GTTGTTTTAGGAAACTACTT+TGG - chr5.1:48161061-48161080 MS.gene010239:intron 30.0%
!!! TGTAATTTTGGTTATGGGAT+TGG - chr5.1:48161228-48161247 MS.gene010239:intron 30.0%
AAACTCCAATATGGCACAAT+TGG - chr5.1:48160884-48160903 MS.gene010239:intron 35.0%
AACAATGTCTTACATAGCTC+TGG - chr5.1:48158734-48158753 MS.gene010239:CDS 35.0%
AAGCCAAAGAAAGGTAGAAA+TGG - chr5.1:48162712-48162731 MS.gene010239:CDS 35.0%
AATCCAACCAAACTCCAATA+TGG - chr5.1:48160875-48160894 MS.gene010239:intron 35.0%
AATTGCAAATACTGGAAGCA+TGG - chr5.1:48162660-48162679 MS.gene010239:CDS 35.0%
AATTGTGCCATATTGGAGTT+TGG + chr5.1:48160885-48160904 None:intergenic 35.0%
ACATTGGGAATTGCAAATAC+TGG - chr5.1:48162652-48162671 MS.gene010239:CDS 35.0%
ACCATAAAACTTAGAGTGGA+TGG + chr5.1:48160409-48160428 None:intergenic 35.0%
ACTATGCAACTATGAAATGG+GGG + chr5.1:48158915-48158934 None:intergenic 35.0%
AGATGAGCTCCATTTAGTAA+AGG + chr5.1:48159898-48159917 None:intergenic 35.0%
AGCATAGAAGAAAACTAACC+TGG + chr5.1:48161499-48161518 None:intergenic 35.0%
AGGTACATGAGTTTGTGAAT+CGG + chr5.1:48157038-48157057 None:intergenic 35.0%
ATACTCCAAAAATTCACAGC+TGG - chr5.1:48159771-48159790 MS.gene010239:intron 35.0%
ATAGTTGCATAGTACAAGGA+CGG - chr5.1:48158922-48158941 MS.gene010239:CDS 35.0%
ATCCAGAACGATAATGTGTT+TGG + chr5.1:48161138-48161157 None:intergenic 35.0%
ATGGAAATCCAGTGAAATAG+AGG - chr5.1:48162731-48162750 MS.gene010239:CDS 35.0%
ATTTAATCACTGCAATGCAG+GGG - chr5.1:48162318-48162337 MS.gene010239:intron 35.0%
CACAACTAAATCTCAGTTAC+TGG - chr5.1:48161926-48161945 MS.gene010239:CDS 35.0%
CAGCAGTAAGAATAACTTGA+GGG + chr5.1:48157321-48157340 None:intergenic 35.0%
CCAAAACTGCTAGACAAAAA+TGG - chr5.1:48159015-48159034 MS.gene010239:intron 35.0%
CTAAATGGAGCTCATCTAAA+TGG - chr5.1:48159901-48159920 MS.gene010239:intron 35.0%
CTAAGTTTCACCAACTAAGT+AGG + chr5.1:48159324-48159343 None:intergenic 35.0%
CTCACTATAGGACATAAATG+AGG + chr5.1:48160350-48160369 None:intergenic 35.0%
CTCATTTATGTCCTATAGTG+AGG - chr5.1:48160348-48160367 MS.gene010239:intron 35.0%
CTTCCTTTGATCCTAAACTT+TGG - chr5.1:48157341-48157360 MS.gene010239:CDS 35.0%
CTTCGAGTATACTCTTCTAA+TGG - chr5.1:48157596-48157615 MS.gene010239:intron 35.0%
GATGAGCTCCATTTAGTAAA+GGG + chr5.1:48159897-48159916 None:intergenic 35.0%
GCATAGAAGAAAACTAACCT+GGG + chr5.1:48161498-48161517 None:intergenic 35.0%
GGTAAAGGGATAAGATTGAA+TGG - chr5.1:48157271-48157290 MS.gene010239:CDS 35.0%
GTAAATACCCTTGGAGTTAT+AGG - chr5.1:48161013-48161032 MS.gene010239:intron 35.0%
GTATACTCTTCTAATGGTCT+CGG - chr5.1:48157602-48157621 MS.gene010239:intron 35.0%
GTATAGAATGAGTGGTTGAT+TGG + chr5.1:48162552-48162571 None:intergenic 35.0%
TAAATCTCAGTTACTGGATG+CGG - chr5.1:48161932-48161951 MS.gene010239:CDS 35.0%
TATACCGAGTTATCAATGGT+GGG - chr5.1:48157219-48157238 MS.gene010239:CDS 35.0%
TATACTCTTCTAATGGTCTC+GGG - chr5.1:48157603-48157622 MS.gene010239:intron 35.0%
TCTCTATGGTATATAGTCCT+TGG - chr5.1:48158005-48158024 MS.gene010239:intron 35.0%
TCTCTTATAAATAAGACCGG+GGG + chr5.1:48158211-48158230 None:intergenic 35.0%
TGGTATATAGTCCTTGGATT+TGG - chr5.1:48158011-48158030 MS.gene010239:intron 35.0%
TTACTTGACAAAGCATGCAA+AGG - chr5.1:48160757-48160776 MS.gene010239:CDS 35.0%
TTCATGCACCCTTTACTAAA+TGG - chr5.1:48159886-48159905 MS.gene010239:intron 35.0%
TTGAAAAAGTTATCTGGGCA+TGG + chr5.1:48162250-48162269 None:intergenic 35.0%
TTGAACCAACTACAGAGATT+TGG - chr5.1:48161963-48161982 MS.gene010239:CDS 35.0%
TTGATCAACGGCATAAAACA+AGG + chr5.1:48158701-48158720 None:intergenic 35.0%
TTGGTACTAATCTACAAGGA+CGG + chr5.1:48161087-48161106 None:intergenic 35.0%
TTTGAAGGTGGGAAACTAAT+TGG - chr5.1:48157875-48157894 MS.gene010239:intron 35.0%
! AAATCTCTGTAGTTGGTTCA+AGG + chr5.1:48161964-48161983 None:intergenic 35.0%
! AATTAGTTTCCCACCTTCAA+AGG + chr5.1:48157876-48157895 None:intergenic 35.0%
! AATTTGGAACTCCATTGACA+CGG + chr5.1:48158974-48158993 None:intergenic 35.0%
! CATTAGAAGAGTATACTCGA+AGG + chr5.1:48157598-48157617 None:intergenic 35.0%
! CTGCTTATGATTTGGATCAT+TGG - chr5.1:48157936-48157955 MS.gene010239:intron 35.0%
! GTACCAAAGTTTAGGATCAA+AGG + chr5.1:48157347-48157366 None:intergenic 35.0%
! TAAGGATTTTGTAAGTGGGT+TGG + chr5.1:48157080-48157099 None:intergenic 35.0%
! TAAGTCCAGCTGTGAATTTT+TGG + chr5.1:48159779-48159798 None:intergenic 35.0%
! TCAGGTTACTTTGCAAGATT+TGG - chr5.1:48158875-48158894 MS.gene010239:CDS 35.0%
! TCCATCCACTCTAAGTTTTA+TGG - chr5.1:48160405-48160424 MS.gene010239:intron 35.0%
! TTTTAGCAACTTCAACTGCT+CGG + chr5.1:48161198-48161217 None:intergenic 35.0%
!! AAGTTCCAAGCATTGATCAA+CGG + chr5.1:48158713-48158732 None:intergenic 35.0%
!! ATGTCGATTTCTGTCACATT+GGG - chr5.1:48162637-48162656 MS.gene010239:CDS 35.0%
!! ATTTTGGTAATTTTGTGCGG+TGG - chr5.1:48161355-48161374 MS.gene010239:intron 35.0%
!! CCATTTTTGTCTAGCAGTTT+TGG + chr5.1:48159018-48159037 None:intergenic 35.0%
!! CTATTTAATTTGCTTGGCGT+GGG + chr5.1:48159750-48159769 None:intergenic 35.0%
!! GTAATCAAACTTTTCAGGGA+TGG - chr5.1:48160718-48160737 MS.gene010239:CDS 35.0%
!! TATGCTGTTTCCTATGTAAG+AGG - chr5.1:48157836-48157855 MS.gene010239:intron 35.0%
!! TATTTAATTTGCTTGGCGTG+GGG + chr5.1:48159749-48159768 None:intergenic 35.0%
!! TCTATTTAATTTGCTTGGCG+TGG + chr5.1:48159751-48159770 None:intergenic 35.0%
!! TCTTTAGAGCATACTTGGTT+TGG + chr5.1:48160911-48160930 None:intergenic 35.0%
!! TGAGAAAAGTACCTTCCATT+GGG + chr5.1:48159698-48159717 None:intergenic 35.0%
!! TTCTAAGAAGCCGGTTATTT+TGG - chr5.1:48161339-48161358 MS.gene010239:intron 35.0%
!!! GGTTTTCTTTAGAGCATACT+TGG + chr5.1:48160916-48160935 None:intergenic 35.0%
!!! GTGAAGGTTGTTGTTTTTGA+CGG + chr5.1:48162524-48162543 None:intergenic 35.0%
!!! GTTTTCGAGTATAGAATGAG+TGG + chr5.1:48162560-48162579 None:intergenic 35.0%
AAAGTCTACGAATTCGGCTA+TGG - chr5.1:48162463-48162482 MS.gene010239:CDS 40.0%
AACTGCATGCAATGTAGTTG+TGG - chr5.1:48161717-48161736 MS.gene010239:intron 40.0%
ACATATTTAGGGACCCAAGA+TGG - chr5.1:48157765-48157784 MS.gene010239:intron 40.0%
AGCCAAACACATTATCGTTC+TGG - chr5.1:48161133-48161152 MS.gene010239:intron 40.0%
ATATCAATGGTCCCAATGGA+AGG - chr5.1:48159684-48159703 MS.gene010239:intron 40.0%
ATATTTAGGGACCCAAGATG+GGG - chr5.1:48157767-48157786 MS.gene010239:intron 40.0%
ATTAGGGCCTATAACTCCAA+GGG + chr5.1:48161023-48161042 None:intergenic 40.0%
ATTTGGCTGAACTGACTAGA+TGG - chr5.1:48161980-48161999 MS.gene010239:CDS 40.0%
CAATGTGACAGAAATCGACA+TGG + chr5.1:48162638-48162657 None:intergenic 40.0%
CATATTTAGGGACCCAAGAT+GGG - chr5.1:48157766-48157785 MS.gene010239:intron 40.0%
CTAAAAGACAAATCAGGCGA+CGG + chr5.1:48158347-48158366 None:intergenic 40.0%
CTCATTCTCATGTCTGTCAT+TGG + chr5.1:48162388-48162407 None:intergenic 40.0%
CTCTATATCAATGGTCCCAA+TGG - chr5.1:48159680-48159699 MS.gene010239:intron 40.0%
CTCTTATAAATAGGACCGGA+GGG - chr5.1:48158307-48158326 MS.gene010239:CDS 40.0%
CTGCTCAATCTTTGATCAGA+TGG - chr5.1:48161681-48161700 MS.gene010239:intron 40.0%
CTGTTTGTGAAGCCAAAGAA+AGG - chr5.1:48162703-48162722 MS.gene010239:CDS 40.0%
CTTCAAGGAGATTCCTTTGA+AGG - chr5.1:48157860-48157879 MS.gene010239:intron 40.0%
CTTCCAAGAGTAAATACCCT+TGG - chr5.1:48161004-48161023 MS.gene010239:intron 40.0%
GCAGCAGTAAGAATAACTTG+AGG + chr5.1:48157322-48157341 None:intergenic 40.0%
GGGAGTGAGCACAAATAAAA+TGG + chr5.1:48158191-48158210 None:intergenic 40.0%
GGGTATTTACTCTTGGAAGT+GGG + chr5.1:48161003-48161022 None:intergenic 40.0%
GGTCCAAAAGTCTACGAATT+CGG - chr5.1:48162457-48162476 MS.gene010239:CDS 40.0%
GTATACCGAGTTATCAATGG+TGG - chr5.1:48157218-48157237 MS.gene010239:CDS 40.0%
GTCAGGTAACATCTGAAGAT+TGG - chr5.1:48161594-48161613 MS.gene010239:intron 40.0%
GTCGATTAGATCTTGGTATG+AGG + chr5.1:48159980-48159999 None:intergenic 40.0%
GTCTCGGGTTTGAATCATTT+CGG - chr5.1:48157618-48157637 MS.gene010239:intron 40.0%
GTTGAGATTGCAGAAGAGTA+AGG + chr5.1:48157098-48157117 None:intergenic 40.0%
TATGTAGGTGATTGGAACTG+AGG - chr5.1:48157682-48157701 MS.gene010239:intron 40.0%
TCCTATGTAAGAGGACTTCA+AGG - chr5.1:48157845-48157864 MS.gene010239:intron 40.0%
TCCTTGAAGTCCTCTTACAT+AGG + chr5.1:48157849-48157868 None:intergenic 40.0%
TCGGTATACCGAGTTATCAA+TGG - chr5.1:48157215-48157234 MS.gene010239:CDS 40.0%
TCTCTTATAAATAGGACCGG+AGG - chr5.1:48158306-48158325 MS.gene010239:CDS 40.0%
TGAATAGATTGTGTAGGGCA+CGG + chr5.1:48160823-48160842 None:intergenic 40.0%
TTATGCCGTTGATCAATGCT+TGG - chr5.1:48158705-48158724 MS.gene010239:CDS 40.0%
TTCAGCCAAATCTCTGTAGT+TGG + chr5.1:48161971-48161990 None:intergenic 40.0%
TTGGACCAATTGTGCCATAT+TGG + chr5.1:48160892-48160911 None:intergenic 40.0%
TTTAATCACTGCAATGCAGG+GGG - chr5.1:48162319-48162338 MS.gene010239:intron 40.0%
TTTGACGGAAATGAAGCTGT+AGG + chr5.1:48162509-48162528 None:intergenic 40.0%
TTTGGATCATTGGAAGGGTT+TGG - chr5.1:48157946-48157965 MS.gene010239:intron 40.0%
! AAGGAGATTCCTTTGAAGGT+GGG - chr5.1:48157864-48157883 MS.gene010239:intron 40.0%
! ACTTTGGTACCGAATCAGTA+AGG - chr5.1:48157357-48157376 MS.gene010239:CDS 40.0%
! AGAGATGATTTAGAGTTGCC+TGG - chr5.1:48161280-48161299 MS.gene010239:intron 40.0%
! AGGGTATTTACTCTTGGAAG+TGG + chr5.1:48161004-48161023 None:intergenic 40.0%
! ATAAGTTCTTGCTGCTTACC+AGG + chr5.1:48161301-48161320 None:intergenic 40.0%
! CTTTTGGACCTGTGTAGAAA+CGG + chr5.1:48162447-48162466 None:intergenic 40.0%
! GGTTACTTTGCAAGATTTGG+CGG - chr5.1:48158878-48158897 MS.gene010239:CDS 40.0%
! GTGTTGCTAATGCTGGTAAA+GGG - chr5.1:48157257-48157276 MS.gene010239:CDS 40.0%
! TAGCCGAATTCGTAGACTTT+TGG + chr5.1:48162463-48162482 None:intergenic 40.0%
! TATCGTTCTGGATGTCTTGA+TGG - chr5.1:48161145-48161164 MS.gene010239:intron 40.0%
! TCATCCCACCATTGATAACT+CGG + chr5.1:48157226-48157245 None:intergenic 40.0%
! TCTATTGAAGGTGTGAGCAA+TGG - chr5.1:48159298-48159317 MS.gene010239:intron 40.0%
! TGGTTGATTGGTTGATGTGA+AGG + chr5.1:48162540-48162559 None:intergenic 40.0%
! TTTGGATCATGAGGTGGTTT+TGG - chr5.1:48158758-48158777 MS.gene010239:CDS 40.0%
!! ACTCCAAGGGTATTTACTCT+TGG + chr5.1:48161010-48161029 None:intergenic 40.0%
!! ATTATTTGGGCTGGTTATCC+TGG - chr5.1:48161424-48161443 MS.gene010239:intron 40.0%
!! CATGTCGATTTCTGTCACAT+TGG - chr5.1:48162636-48162655 MS.gene010239:CDS 40.0%
!! CTGATTCGGTACCAAAGTTT+AGG + chr5.1:48157355-48157374 None:intergenic 40.0%
!! GTGAGAAAAGTACCTTCCAT+TGG + chr5.1:48159699-48159718 None:intergenic 40.0%
!! TCTTTTGGGTACCATGTCAT+TGG + chr5.1:48162352-48162371 None:intergenic 40.0%
!!! GAGGTGGTTTTGGATACATT+TGG - chr5.1:48158768-48158787 MS.gene010239:CDS 40.0%
!!! GTCTTACATAGCTCTGGTTT+TGG - chr5.1:48158740-48158759 MS.gene010239:CDS 40.0%
AACTGACTAGATGGTAGCAG+AGG - chr5.1:48161989-48162008 MS.gene010239:CDS 45.0%
ACTGACTAGATGGTAGCAGA+GGG - chr5.1:48161990-48162009 MS.gene010239:CDS 45.0%
AGAACCTACCGTTTCTACAC+AGG - chr5.1:48162436-48162455 MS.gene010239:CDS 45.0%
AGATTGAATGGCAGTGTTGC+AGG - chr5.1:48157283-48157302 MS.gene010239:CDS 45.0%
AGGCTATGCAAAAACACCAG+AGG - chr5.1:48159531-48159550 MS.gene010239:intron 45.0%
ATAGTACAAGGACGGTCTAG+TGG - chr5.1:48158930-48158949 MS.gene010239:CDS 45.0%
ATGAGAGCTGATCCATCATC+AGG - chr5.1:48162403-48162422 MS.gene010239:CDS 45.0%
ATTGGAGGGATTATTTGGGC+TGG - chr5.1:48161415-48161434 MS.gene010239:intron 45.0%
CATTAGGGCCTATAACTCCA+AGG + chr5.1:48161024-48161043 None:intergenic 45.0%
GAGCCAAAGACATTGTGTCA+CGG - chr5.1:48157134-48157153 MS.gene010239:CDS 45.0%
GCTTTGTCTAATACTCCCTC+CGG + chr5.1:48158325-48158344 None:intergenic 45.0%
GTAGAAACGGTAGGTTCTAC+CGG + chr5.1:48162434-48162453 None:intergenic 45.0%
GTAGCAGATGTACTTCAAGC+TGG - chr5.1:48159559-48159578 MS.gene010239:intron 45.0%
GTGCCATATTGGAGTTTGGT+TGG + chr5.1:48160881-48160900 None:intergenic 45.0%
TAGAAACGGTAGGTTCTACC+GGG + chr5.1:48162433-48162452 None:intergenic 45.0%
TCTTGGAAGTGGGAGAATTG+AGG + chr5.1:48160993-48161012 None:intergenic 45.0%
TGAGCAATGGCCTACTTAGT+TGG - chr5.1:48159311-48159330 MS.gene010239:intron 45.0%
TGTGCTTACAACCGTGTCAA+TGG - chr5.1:48158960-48158979 MS.gene010239:CDS 45.0%
TTAATCACTGCAATGCAGGG+GGG - chr5.1:48162320-48162339 MS.gene010239:intron 45.0%
TTGGCGTGGGGAATATATGT+GGG + chr5.1:48159737-48159756 None:intergenic 45.0%
TTTATTTGTGCTCACTCCCC+CGG - chr5.1:48158192-48158211 MS.gene010239:intron 45.0%
! AACCGGCTTCTTAGAAGCTT+TGG + chr5.1:48161335-48161354 None:intergenic 45.0%
! CAAATACTGGAAGCATGGCT+GGG - chr5.1:48162665-48162684 MS.gene010239:CDS 45.0%
! CAAGGAGATTCCTTTGAAGG+TGG - chr5.1:48157863-48157882 MS.gene010239:intron 45.0%
! GCAAGAGGAGTATACAATGC+TGG - chr5.1:48157704-48157723 MS.gene010239:intron 45.0%
! GTGTTTGGTGACTATAACCC+AGG - chr5.1:48161478-48161497 MS.gene010239:intron 45.0%
! TAGGACATAAATGAGGCACC+TGG + chr5.1:48160343-48160362 None:intergenic 45.0%
! TGCCAAAGCTTCTAAGAAGC+CGG - chr5.1:48161330-48161349 MS.gene010239:intron 45.0%
! TGGCTCTTTGAGAGATGGTA+AGG + chr5.1:48157120-48157139 None:intergenic 45.0%
!! GCACGGTCGATTTGAGATAT+CGG + chr5.1:48160806-48160825 None:intergenic 45.0%
!! GGTGTTGCTAATGCTGGTAA+AGG - chr5.1:48157256-48157275 MS.gene010239:CDS 45.0%
!! GTCTTTGGCTCTTTGAGAGA+TGG + chr5.1:48157125-48157144 None:intergenic 45.0%
!!! AGCTCTGGTTTTGGATCATG+AGG - chr5.1:48158749-48158768 MS.gene010239:CDS 45.0%
!!! GGATTTTGTAAGTGGGTTGG+TGG + chr5.1:48157077-48157096 None:intergenic 45.0%
!!! TCTGGTTTTGGATCATGAGG+TGG - chr5.1:48158752-48158771 MS.gene010239:CDS 45.0%
ACAATGCTGGACAAGCCCAA+GGG - chr5.1:48157717-48157736 MS.gene010239:intron 50.0%
ACATCTGCTACAGCATCCTC+TGG + chr5.1:48159550-48159569 None:intergenic 50.0%
CAGCTTCAAGAGCAACGTCT+AGG + chr5.1:48160937-48160956 None:intergenic 50.0%
CATTGTGTCACGGCTCACAT+TGG - chr5.1:48157144-48157163 MS.gene010239:CDS 50.0%
CTTGGCGTGGGGAATATATG+TGG + chr5.1:48159738-48159757 None:intergenic 50.0%
CTTGTCCTCTTCCCCATCTT+GGG + chr5.1:48157781-48157800 None:intergenic 50.0%
GACAGCTGGAGAAGATCCTT+TGG - chr5.1:48157802-48157821 MS.gene010239:intron 50.0%
GAGCCGTGACACAATGTCTT+TGG + chr5.1:48157140-48157159 None:intergenic 50.0%
GATCCATCATCAGGCTATCC+CGG - chr5.1:48162412-48162431 MS.gene010239:CDS 50.0%
GCTCTTGAAGCTGCAAGAAG+TGG - chr5.1:48160944-48160963 MS.gene010239:intron 50.0%
GCTGGTTATCCTGGTGAACT+TGG - chr5.1:48161433-48161452 MS.gene010239:intron 50.0%
GGCTTCACAAACAGCAACAC+AGG + chr5.1:48162697-48162716 None:intergenic 50.0%
GGTTATCCTGGTGAACTTGG+TGG - chr5.1:48161436-48161455 MS.gene010239:intron 50.0%
GTGAATCGGCATGAACGAGT+TGG + chr5.1:48157024-48157043 None:intergenic 50.0%
GTGATTGGAACTGAGGCAAG+AGG - chr5.1:48157689-48157708 MS.gene010239:intron 50.0%
TAACTCGGTATACCGAGTCG+AGG + chr5.1:48157211-48157230 None:intergenic 50.0%
TACAATGCTGGACAAGCCCA+AGG - chr5.1:48157716-48157735 MS.gene010239:intron 50.0%
TCAGGGATGGATGTAGAGTG+TGG - chr5.1:48160731-48160750 MS.gene010239:CDS 50.0%
TCTTGTCCTCTTCCCCATCT+TGG + chr5.1:48157782-48157801 None:intergenic 50.0%
TGCCCAAAACGTCATCCCTT+GGG + chr5.1:48157735-48157754 None:intergenic 50.0%
TGGACCTGTGTAGAAACGGT+AGG + chr5.1:48162443-48162462 None:intergenic 50.0%
TGGCGTGGGGAATATATGTG+GGG + chr5.1:48159736-48159755 None:intergenic 50.0%
TGGTGGGATGAAGCTTTGCA+CGG - chr5.1:48157235-48157254 MS.gene010239:CDS 50.0%
! AAGCCCAAGGGATGACGTTT+TGG - chr5.1:48157729-48157748 MS.gene010239:intron 50.0%
! AATCGGCATGAACGAGTTGG+TGG + chr5.1:48157021-48157040 None:intergenic 50.0%
! AGCCCAAGGGATGACGTTTT+GGG - chr5.1:48157730-48157749 MS.gene010239:intron 50.0%
! ATCCTGGTGAACTTGGTGGA+AGG - chr5.1:48161440-48161459 MS.gene010239:intron 50.0%
! GCAAATACTGGAAGCATGGC+TGG - chr5.1:48162664-48162683 MS.gene010239:CDS 50.0%
! GCTCTTGCTCAGGTTGTGTT+TGG - chr5.1:48161463-48161482 MS.gene010239:intron 50.0%
! TCCTGGTGAACTTGGTGGAA+GGG - chr5.1:48161441-48161460 MS.gene010239:intron 50.0%
!! TTGCACGGTGTTGCTAATGC+TGG - chr5.1:48157250-48157269 MS.gene010239:CDS 50.0%
!! TTGGTGGTGTCACAGGAGTA+TGG + chr5.1:48157061-48157080 None:intergenic 50.0%
ATACCGAGTCGAGGAATGGC+AGG + chr5.1:48157202-48157221 None:intergenic 55.0%
CGGTATACCGAGTCGAGGAA+TGG + chr5.1:48157206-48157225 None:intergenic 55.0%
CTACCGGGATAGCCTGATGA+TGG + chr5.1:48162418-48162437 None:intergenic 55.0%
GGAAGAGGACAAGAGACAGC+TGG - chr5.1:48157788-48157807 MS.gene010239:intron 55.0%
GGGGGAGACTACCAATGACA+TGG - chr5.1:48162338-48162357 MS.gene010239:CDS 55.0%
GTGCCCAAAACGTCATCCCT+TGG + chr5.1:48157736-48157755 None:intergenic 55.0%
! CAGTGTTACTGCACGCAGTC+AGG - chr5.1:48161577-48161596 MS.gene010239:intron 55.0%
!! AAGTGGGTTGGTGGTGTCAC+AGG + chr5.1:48157068-48157087 None:intergenic 55.0%
!! CGAGTTGGTGGTAGCGAGTT+AGG + chr5.1:48157009-48157028 None:intergenic 55.0%
!! GTGGTGTCACAGGAGTATGG+AGG + chr5.1:48157058-48157077 None:intergenic 55.0%
AGGGACCCAAGATGGGGAAG+AGG - chr5.1:48157773-48157792 MS.gene010239:intron 60.0%
GCCCTTCCACCAAGTTCACC+AGG + chr5.1:48161445-48161464 None:intergenic 60.0%
GCTCCTGCCATTCCTCGACT+CGG - chr5.1:48157196-48157215 MS.gene010239:CDS 60.0%
TGGTGGAAGGGCTCTTGCTC+AGG - chr5.1:48161453-48161472 MS.gene010239:intron 60.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 48156965 48162750 48156965 ID=MS.gene010239
chr5.1 mRNA 48156965 48162750 48156965 ID=MS.gene010239.t1;Parent=MS.gene010239
chr5.1 exon 48162337 48162750 48162337 ID=MS.gene010239.t1.exon1;Parent=MS.gene010239.t1
chr5.1 CDS 48162337 48162750 48162337 ID=cds.MS.gene010239.t1;Parent=MS.gene010239.t1
chr5.1 exon 48161724 48162026 48161724 ID=MS.gene010239.t1.exon2;Parent=MS.gene010239.t1
chr5.1 CDS 48161724 48162026 48161724 ID=cds.MS.gene010239.t1;Parent=MS.gene010239.t1
chr5.1 exon 48160667 48160836 48160667 ID=MS.gene010239.t1.exon3;Parent=MS.gene010239.t1
chr5.1 CDS 48160667 48160836 48160667 ID=cds.MS.gene010239.t1;Parent=MS.gene010239.t1
chr5.1 exon 48160135 48160232 48160135 ID=MS.gene010239.t1.exon4;Parent=MS.gene010239.t1
chr5.1 CDS 48160135 48160232 48160135 ID=cds.MS.gene010239.t1;Parent=MS.gene010239.t1
chr5.1 exon 48158216 48158980 48158216 ID=MS.gene010239.t1.exon5;Parent=MS.gene010239.t1
chr5.1 CDS 48158216 48158980 48158216 ID=cds.MS.gene010239.t1;Parent=MS.gene010239.t1
chr5.1 exon 48156965 48157377 48156965 ID=MS.gene010239.t1.exon6;Parent=MS.gene010239.t1
chr5.1 CDS 48156965 48157377 48156965 ID=cds.MS.gene010239.t1;Parent=MS.gene010239.t1
Gene Sequence

>MS.gene010239

ATGGGTCACTTTTCCATCACCATTACTTTCATTTTTCTCTTCCTAACTCGCTACCACCAACTCGTTCATGCCGATTCACAAACTCATGTACCTCCATACTCCTGTGACACCACCAACCCACTTACAAAATCCTTACTCTTCTGCAATCTCAACCTTACCATCTCTCAAAGAGCCAAAGACATTGTGTCACGGCTCACATTGGATGAGAAAATCTCTCAACTCGTTAACACAGCTCCTGCCATTCCTCGACTCGGTATACCGAGTTATCAATGGTGGGATGAAGCTTTGCACGGTGTTGCTAATGCTGGTAAAGGGATAAGATTGAATGGCAGTGTTGCAGGTGCTACTAGTTTCCCTCAAGTTATTCTTACTGCTGCTTCCTTTGATCCTAAACTTTGGTACCGAATCAGTAAGGTTAGTAACTCTTTTAATCCATGTTTGAAATTCATTTTAAGATATTTTTTGTATTTTTATCTTTATATACAAAAACATGAACTAGTTTAAAGATTTTAGTTTTTGGTTTATTAGTTTAAGATATATTAATTACTTGAATTCAGTTTTTATAATAAGAAAACATATTATATTAGTGTATTTTTATCATCACTTCAGATGAGTTCGTCAGACTTGAGACCTTCGAGTATACTCTTCTAATGGTCTCGGGTTTGAATCATTTCGGTGTCAGATAAAAAATTATACTTTTTTATCTTAATTAAATTGTATGTAGGTGATTGGAACTGAGGCAAGAGGAGTATACAATGCTGGACAAGCCCAAGGGATGACGTTTTGGGCACCAAACATAAACATATTTAGGGACCCAAGATGGGGAAGAGGACAAGAGACAGCTGGAGAAGATCCTTTGGTAAATTCAAAATATGCTGTTTCCTATGTAAGAGGACTTCAAGGAGATTCCTTTGAAGGTGGGAAACTAATTGGAGATCGTCTTAAAGCTTCTGCTTGTTGCAAACACTTTACTGCTTATGATTTGGATCATTGGAAGGGTTTGGACCGTTTTGATTTTGATGCAAAAGTAAGTTTTCTTTTCTCTATGGTATATAGTCCTTGGATTTGGATGATTAATTCAGCGGTGAACAAGTGAGATAAATCTTGCATCATGCACAAACTAATTTTCACTATTAGATCAATAAATCTTATTGTTAAATTGAAAGATGTATAATGTGATTTATTAGTCAAATGTAGAAATGATATTTGAGGATGATACAAAACCATTTTATTTGTGCTCACTCCCCCGGTCTTATTTATAAGAGAAATTTTGGTCAACGAAATTTAATGTATTTGGTTTGAATTATGAACCAGATACATCAACTTTTGTTAACCAAACATTCTCTTATAAATAGGACCGGAGGGAGTATTAGACAAAGCCGTCGCCTGATTTGTCTTTTAGTTTCGTTTGTTGTGTTGTACAGCAGAGTCTGTTTTGTCTTTTTGTTATTTTTATTTTGAATTGCCTTGTTTTATGTCGTTGATGAATACTTGGAACTTGAATAATTTCTTGCATATTAGAGCTTCAATTATCTTTAGTCATGTTAGGTATTATTGCCAAAAGAATAGTTGATTTAATATTGAAATTAAAAAATGACAAAGAGGTAATAGCAAAATTTTGAAAAAAAAATCGATACTTGAATAAAAACAGAGAAAGTGACCAAGTTCTTGCTTGTTTAGTTTGTTGAGTTGTGCATATCATGATTTGTCCTTTTGTTTCACATTTTGAATTGCCTTGTTTTATGCCGTTGATCAATGCTTGGAACTTGAACAATGTCTTACATAGCTCTGGTTTTGGATCATGAGGTGGTTTTGGATACATTTGGTCAACTTTTTATGCTAATGATTCTTATTATATTCTTCAGCTTTTAAATTTTTTCATTTAAATAATCCAAATCCGTTCTAATAATTCAGGTTACTTTGCAAGATTTGGCGGATACGTATCAACCCCCATTTCATAGTTGCATAGTACAAGGACGGTCTAGTGGAATAATGTGTGCTTACAACCGTGTCAATGGAGTTCCAAATTGTGCAGATTACAATTTGTTAACCAAAACTGCTAGACAAAAATGGAATTTCAATGGGTATAGATATTAGTTTGTGTTACATGTTTTTTTTACCCTTATAATTATTTCAATTTTGTTTTTTTAATTATTTTATTTACTTTTTAGCTCTTACAAATTACAAAATTGGAAACACAAAATATGTAGTTTTGTATTTTTTTTAGATATTTAAAAGCGAGTACAAAAATGTAAATTTTAAAAGAAGGAACCCCTTATAAGAATTAAACAATATATTTAACAATGTATCCTTTATGAAACAATGTTTTTCACTCTATTGAAGGTGTGAGCAATGGCCTACTTAGTTGGTGAAACTTAGTTTTCAATTCAAACTTTTCAGTTTTCTCTCCTTTTTTTGAAGCTACATATTTATAATGTATCATTCACCAAAATGTGAAAGTGAACTTTAACTTTTTTTTACTTGATTAATAAGAATGATTTTTTGGTGTTAAAATCAGGTATATTACGTCGGATTGTGAAGCAGTAAGAATCATATATGATAATCAAGGCTATGCAAAAACACCAGAGGATGCTGTAGCAGATGTACTTCAAGCTGGTATACTTTCACTCTTCCTTTGTTTATACATCTATTAACAATATATAAAGAAAATATGAGATTTTATTTTTTGGGCTAAGTGTAATTATCATTATCTAACTCTATATCAATGGTCCCAATGGAAGGTACTTTTCTCACATTTTCATTAGAGTCCCCACATATATTCCCCACGCCAAGCAAATTAAATAGAATACTCCAAAAATTCACAGCTGGACTTAAGTTGTGTGTCAAAGACTGTACTTGTTTTAATGTCTATCATTGGACCTGAGTACAACCTAAAAACTTTCTTTCAATTAGAGATTTATTTCATGCACCCTTTACTAAATGGAGCTCATCTAAATGGAGCAAAGATGAACTCTTACCTCATACTTATTTTTCTGAGAGGTGTGCATTTTACCTCATACCAAGATCTAATCGACTAAATCACGAGAATTAAAAAAGTTGGTTTTAATATAAATTTGTTGACAATTGTTATTGTTTTATATGTTTACCTTTTAGGATAGAGAATAAGTTGATATTTCTATCAACGTATCTATTCCAGATTGCGAAAAATGATGTAATATAATTAGATCTACATTGGTAAACAAATACTTGAAAATTTAAAAGAGATCTTAAAAAGAGGGACAAAATAATCTCAAGATGATCTAATATTTAGCGATGAGGAGATGATATTTTACTTTTCATCATTTTAGTTGTTTAAGTTCTGGCTTAGTTGAAGTTGTGACTTCCTTATCATTTTGTATTTTAGTTATGACTTTGCCAGGTGCCTCATTTATGTCCTATAGTGAGGAAAATTTGCAAGTGTCCATGATAATTAAGATTGATCCATCCACTCTAAGTTTTATGGTTAAATTACATGTCTTAATTTTTTCACATTGTGGACATTTACTATCTCTAAACTTTATAATCACACTTTATTTGCCTTAGTTTTAATTTAGGTCAAAGTTCTTTACCTCTAAGCTCTATAATCTCTTTAGTTATCTTTATTTTGCAACAGAACAGAACATGACTTTAGAAATAATGCATGTTTAGGTTGTTGATGAACTTTAGAGAATCACATAGTATCATTGTAATTTTGTCAAACTCAACTCCAAACATACACAAGTACTATTATAATCAAGGCGATTTACATATTGTGTAATCAAACTTTTCAGGGATGGATGTAGAGTGTGGTGATTACTTGACAAAGCATGCAAAGGCAGCAGTATTACAAAAAAAAGTACCGATATCTCAAATCGACCGTGCCCTACACAATCTATTCACCATTAGAATAAGACTAGGTTTGTTTGATGGGAATCCAACCAAACTCCAATATGGCACAATTGGTCCAAACCAAGTATGCTCTAAAGAAAACCTAGACGTTGCTCTTGAAGCTGCAAGAAGTGGCATTGTACTTTTAAAAAACACTGCCTCAATTCTCCCACTTCCAAGAGTAAATACCCTTGGAGTTATAGGCCCTAATGCCAATAAATCATCGAAGGTTGTTTTAGGAAACTACTTTGGCCGTCCTTGTAGATTAGTACCAATATTAAAAGGATTTTACACTTATGCTAGCCAAACACATTATCGTTCTGGATGTCTTGATGGAACGAAGTGTGTTTCAGCTGAAATTGACCGAGCAGTTGAAGTTGCTAAAATAAGTGATTATGTAATTTTGGTTATGGGATTGGATCAAAGTCAAGAGAGGGAATCACGCGATAGAGATGATTTAGAGTTGCCTGGTAAGCAGCAAGAACTTATTAATAGTGTTGCCAAAGCTTCTAAGAAGCCGGTTATTTTGGTAATTTTGTGCGGTGGTCCTGTTGATATTACTTTTGCTAAGAATAATGACAAAATTGGAGGGATTATTTGGGCTGGTTATCCTGGTGAACTTGGTGGAAGGGCTCTTGCTCAGGTTGTGTTTGGTGACTATAACCCAGGTTAGTTTTCTTCTATGCTTTATCCATTGACAGATAAAAACACATAATATGTTAAAAAAATGGATTTAGATTGTTTGCAGTGTTACTGCACGCAGTCAGGTAACATCTGAAGATTGGACAGTTCAGATTTCAATGACAACTTGATTTTTTAAAATCTAAAATATCAAGTTTGAAATTTAAACTGCTCAATCTTTGATCAGATGGTTCAGATATTGCTAACTGCATGCAATGTAGTTGTGGTTGCGCACGACCAAGATCCTTAAAACATGTATAAACTTCGTAGATTTGGAAAAGTCTTAATTATTGAATAAGATAATATTTAGTTAAGCAAAAAGGGAATTTTTTTAATTTTTATTTATTTTATATTGGGAGACAAGGGAAAGAGTCTAAAAATTCAGCTTCGGTCCCATGCAATCATTTAGTAAACACAACTAAATCTCAGTTACTGGATGCGGAATGAACCTTGAACCAACTACAGAGATTTGGCTGAACTGACTAGATGGTAGCAGAGGGTCCAGATTCAAAGAAAACAGTCTTTATGTTCATGGTTTTTAGAAATAGTCTGCAACTGTGATTGTGACCATAAAATGAAGACTATTTTCTATACGACGGTTGTAGCAATGTCAAATATATTTAGCAAATGTTTTCTACAATATCATCCATGTCAATGCAACTTAAAAGTGTCCACAATTTAAAACATTGCTTATAGTGCTATTAGCTTTTTCTTGTTGACCAAAATTATTATATCCATGCCCAGATAACTTTTTCAAGTATATTTTCCTAAAACTATTATTACTCAACTAATGGGATGCTTTGTTATTTAATCACTGCAATGCAGGGGGGAGACTACCAATGACATGGTACCCAAAAGATTTCATCAAAATACCAATGACAGACATGAGAATGAGAGCTGATCCATCATCAGGCTATCCCGGTAGAACCTACCGTTTCTACACAGGTCCAAAAGTCTACGAATTCGGCTATGGCCTAAGCTACTCAAATTATTCCTACAGCTTCATTTCCGTCAAAAACAACAACCTTCACATCAACCAATCAACCACTCATTCTATACTCGAAAACTCTGAAACAATCCGTTACAAACTTGTTTCAGAGTTAGGCGAAGAAACATGTCAAACCATGTCGATTTCTGTCACATTGGGAATTGCAAATACTGGAAGCATGGCTGGGAAACATCCTGTGTTGCTGTTTGTGAAGCCAAAGAAAGGTAGAAATGGAAATCCAGTGAAATAG
Protein sequence

>MS.gene010239.t1

MGHFSITITFIFLFLTRYHQLVHADSQTHVPPYSCDTTNPLTKSLLFCNLNLTISQRAKDIVSRLTLDEKISQLVNTAPAIPRLGIPSYQWWDEALHGVANAGKGIRLNGSVAGATSFPQVILTAASFDPKLWYRISKVIGTEARGVYNAGQAQGMTFWAPNINIFRDPRWGRGQETAGEDPLVNSKYAVSYVRGLQGDSFEGGKLIGDRLKASACCKHFTAYDLDHWKGLDRFDFDAKVTLQDLADTYQPPFHSCIVQGRSSGIMCAYNRVNGVPNCADYNLLTKTARQKWNFNGYITSDCEAVRIIYDNQGYAKTPEDAVADVLQAGMDVECGDYLTKHAKAAVLQKKVPISQIDRALHNLFTIRIRLGLFDGNPTKLQYGTIGPNQVCSKENLDVALEAARSGIVLLKNTASILPLPRVNTLGVIGPNANKSSKVVLGNYFGRPCRLVPILKGFYTYASQTHYRSGCLDGTKCVSAEIDRAVEVAKISDYVILVMGLDQSQERESRDRDDLELPGKQQELINSVAKASKKPVILVILCGGPVDITFAKNNDKIGGIIWAGYPGELGGRALAQVVFGDYNPGGRLPMTWYPKDFIKIPMTDMRMRADPSSGYPGRTYRFYTGPKVYEFGYGLSYSNYSYSFISVKNNNLHINQSTTHSILENSETIRYKLVSELGEETCQTMSISVTLGIANTGSMAGKHPVLLFVKPKKGRNGNPVK