AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene00195

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene00195.t1 MTR_2g034720 97.267 622 17 0 2 623 132 753 0.0 1262
MS.gene00195.t1 MTR_7g109390 70.111 629 178 4 2 622 133 759 0.0 937
MS.gene00195.t1 MTR_1g087240 69.048 630 182 5 2 622 128 753 0.0 915
MS.gene00195.t1 MTR_4g094285 58.506 629 250 5 2 622 145 770 0.0 755
MS.gene00195.t1 MTR_2g008240 57.484 628 256 5 3 622 147 771 0.0 746
MS.gene00195.t1 MTR_1g106860 53.249 631 279 5 2 616 129 759 0.0 679
MS.gene00195.t1 MTR_5g030860 47.516 644 307 10 7 622 138 778 0.0 630
MS.gene00195.t1 MTR_3g074060 47.894 641 311 11 2 622 135 772 0.0 616
MS.gene00195.t1 MTR_5g062430 47.975 642 309 10 2 622 141 778 0.0 610
MS.gene00195.t1 MTR_5g062320 47.123 643 313 12 2 622 139 776 0.0 599
MS.gene00195.t1 MTR_5g062370 46.885 642 316 10 2 622 141 778 0.0 593
MS.gene00195.t1 MTR_5g062650 46.885 642 317 10 2 622 143 781 0.0 592
MS.gene00195.t1 MTR_5g062370 49.782 458 216 7 2 448 141 595 6.59e-156 461
MS.gene00195.t1 MTR_6g028120 26.012 519 284 26 16 491 141 602 1.88e-27 117
MS.gene00195.t1 MTR_3g079750 25.483 518 288 24 16 491 160 621 3.28e-27 117
MS.gene00195.t1 MTR_6g028110 25.047 527 296 26 7 491 153 622 3.96e-27 117
MS.gene00195.t1 MTR_3g462820 26.337 505 303 24 16 492 154 617 4.77e-27 116
MS.gene00195.t1 MTR_6g028110 24.859 531 300 26 7 495 153 626 4.87e-27 116
MS.gene00195.t1 MTR_6g028100 26.112 517 303 25 7 491 152 621 9.68e-27 115
MS.gene00195.t1 MTR_7g086030 24.754 509 303 25 16 491 136 597 3.39e-25 110
MS.gene00195.t1 MTR_7g086030 24.754 509 303 25 16 491 161 622 4.90e-25 110
MS.gene00195.t1 MTR_5g069800 23.896 498 314 18 23 494 146 604 3.15e-24 107
MS.gene00195.t1 MTR_2g030000 25.195 512 297 24 16 491 162 623 3.75e-24 107
MS.gene00195.t1 MTR_7g086010 23.659 317 206 13 16 314 171 469 9.69e-16 80.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene00195.t1 AT5G49360 71.406 633 167 7 2 623 140 769 0.0 929
MS.gene00195.t1 AT1G02640 67.783 627 191 4 2 622 135 756 0.0 899
MS.gene00195.t1 AT5G64570 58.425 635 246 7 2 622 150 780 0.0 751
MS.gene00195.t1 AT5G64570 58.307 626 243 7 11 622 1 622 0.0 738
MS.gene00195.t1 AT5G09730 56.940 634 256 7 2 622 140 769 0.0 733
MS.gene00195.t1 AT3G19620 53.397 633 271 7 2 616 132 758 0.0 696
MS.gene00195.t1 AT1G78060 47.792 634 309 9 2 617 129 758 0.0 624
MS.gene00195.t1 AT5G10560 45.427 656 319 8 4 622 135 788 0.0 606
MS.gene00195.t1 AT5G64570 65.618 445 147 4 2 442 150 592 0.0 597
MS.gene00195.t1 AT5G09700 51.195 502 222 7 141 622 24 522 4.98e-172 500
MS.gene00195.t1 AT3G47000 27.833 503 283 22 22 491 149 604 1.19e-29 124
MS.gene00195.t1 AT3G47050 27.075 506 281 23 22 491 149 602 2.99e-29 123
MS.gene00195.t1 AT3G47040 25.498 502 300 20 22 493 149 606 4.00e-28 119
MS.gene00195.t1 AT3G47040 25.498 502 300 20 22 493 174 631 4.35e-28 120
MS.gene00195.t1 AT5G04885 26.380 489 293 20 16 470 162 617 2.93e-26 114
MS.gene00195.t1 AT5G04885 26.380 489 293 20 16 470 162 617 2.93e-26 114
MS.gene00195.t1 AT3G47010 25.102 490 313 18 22 491 150 605 3.25e-26 114
MS.gene00195.t1 AT5G04885 26.380 489 293 20 16 470 179 634 3.46e-26 114
MS.gene00195.t1 AT3G62710 24.699 498 313 20 22 490 184 648 8.09e-26 112
MS.gene00195.t1 AT3G47010 25.306 490 311 19 22 491 150 604 1.64e-25 111
MS.gene00195.t1 AT5G20950 24.951 509 301 21 16 491 236 696 6.51e-23 103
MS.gene00195.t1 AT5G20950 24.951 509 301 21 16 491 158 618 1.03e-22 103
MS.gene00195.t1 AT5G20950 24.951 509 301 21 16 491 158 618 1.03e-22 103
MS.gene00195.t1 AT3G47000 31.058 293 162 13 22 290 149 425 1.07e-21 99.0
MS.gene00195.t1 AT3G47010 25.287 435 281 17 67 491 26 426 2.50e-21 97.4
MS.gene00195.t1 AT3G47040 24.486 486 293 20 38 493 198 639 2.84e-21 98.6
MS.gene00195.t1 AT3G47000 26.539 471 267 21 54 491 3 427 3.08e-21 97.4
MS.gene00195.t1 AT3G47040 27.526 287 180 11 22 290 149 425 2.35e-20 94.7
MS.gene00195.t1 AT5G20940 24.603 504 305 21 16 490 164 621 1.25e-19 93.6
MS.gene00195.t1 AT3G47010 27.213 305 192 11 22 307 150 443 2.93e-18 88.2
MS.gene00195.t1 AT3G47050 27.706 231 132 9 22 231 149 365 1.91e-15 79.0

Find 191 sgRNAs with CRISPR-Local

Find 293 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTCTACTGTGGATGAATT+TGG 0.142976 2.1:-58074723 MS.gene00195:CDS
TGTGGTGGAAATCAACTATT+TGG 0.170124 2.1:-58075734 MS.gene00195:CDS
CGCTGCGGCTGCTGCTTCTT+CGG 0.202826 2.1:+58076318 None:intergenic
CGCAACCTTGAGCCGGTTTC+CGG 0.203163 2.1:+58077501 None:intergenic
TGATCTCAAACATTCTATTT+TGG 0.203245 2.1:-58074658 None:intergenic
CGTGGCGAATGGGGCCTTAA+TGG 0.209848 2.1:-58076510 MS.gene00195:CDS
TTTCTACTGTGGATGAATTT+GGG 0.229787 2.1:-58074722 MS.gene00195:CDS
ATCTCATTTGGACTGTAATA+AGG 0.280567 2.1:+58076185 None:intergenic
TTGGCAAATGTAACATCAAT+AGG 0.293814 2.1:+58075527 None:intergenic
ATGGTGTTGCGAAGGAGTTC+GGG 0.299708 2.1:+58076534 None:intergenic
GACATGAGTACCAAGATAAC+TGG 0.305023 2.1:+58075557 None:intergenic
TGGTTATACGACGCCGTTGC+AGG 0.310431 2.1:-58075810 MS.gene00195:CDS
GCCATTGCTGATGTTATCTT+TGG 0.317308 2.1:-58075443 MS.gene00195:CDS
GGGTACCCTGTTGCTGGATT+TGG 0.317910 2.1:+58075116 None:intergenic
GCTGCGGCTGCTGCTTCTTC+GGG 0.320216 2.1:+58076319 None:intergenic
CTACCTGGGTACCCTGTTGC+TGG 0.323288 2.1:+58075110 None:intergenic
TGTAACAGTAACATCAGAAT+TGG 0.323697 2.1:+58075982 None:intergenic
CTCAAGGGCAACATCATTAT+AGG 0.342986 2.1:+58076096 None:intergenic
TCTTGTGGGTACCATGTATT+AGG 0.343276 2.1:+58075179 None:intergenic
GCAGGTGAGTAAACAAGATT+TGG 0.350453 2.1:-58076661 MS.gene00195:intron
GTCTCTAAATTCTGCTTCAA+TGG 0.352837 2.1:+58075649 None:intergenic
GGCCCTGTAGTATTCCCATT+TGG 0.354443 2.1:-58075068 MS.gene00195:CDS
TGATATAGTCTTACCCATTA+AGG 0.355209 2.1:+58076496 None:intergenic
CCACAAAATAGCTCTAATCT+TGG 0.356286 2.1:+58075496 None:intergenic
AATGGTGTTGCGAAGGAGTT+CGG 0.370468 2.1:+58076533 None:intergenic
ACAATTGGAATGGTGTAGAT+AGG 0.371418 2.1:-58077444 MS.gene00195:CDS
TATTACAGTCCAAATGAGAT+TGG 0.390623 2.1:-58076182 MS.gene00195:CDS
GATGTTACTGTTACAATGAT+AGG 0.391407 2.1:-58075974 MS.gene00195:CDS
CAAACATACCCAATCTCATT+TGG 0.391897 2.1:+58076173 None:intergenic
ATGCGTCCAAATCCAGCAAC+AGG 0.394501 2.1:-58075122 MS.gene00195:CDS
CGCATATCCATGTTTGTCAT+TGG 0.395868 2.1:+58075140 None:intergenic
ACCAATTGTTTAACACCATT+AGG 0.397063 2.1:+58074819 None:intergenic
CTGCCTATGATCTTGACAAT+TGG 0.399022 2.1:-58077459 MS.gene00195:CDS
AAATTGAACTGAAACTTGTT+TGG 0.399139 2.1:+58074998 None:intergenic
TCATGCAAATTGTGATGAAT+TGG 0.399301 2.1:-58074919 MS.gene00195:CDS
GGTGAACATGAACTTCAAAT+TGG 0.400654 2.1:-58074681 MS.gene00195:CDS
CTTACATCCTGCTTGATGAA+TGG 0.401606 2.1:+58075766 None:intergenic
CATAAGACTTATGTTCCTGC+TGG 0.403824 2.1:-58074789 MS.gene00195:CDS
GCCCTGTAGTATTCCCATTT+GGG 0.406183 2.1:-58075067 MS.gene00195:CDS
CCTACAGTGCGGTATCTTGT+AGG 0.406542 2.1:+58076016 None:intergenic
CTCTAGACACTAGCTCTTGT+TGG 0.407423 2.1:+58075600 None:intergenic
TGCTGTACGCATGCTTTGAA+TGG 0.407624 2.1:+58076621 None:intergenic
ATTCCAATTGTCAAGATCAT+AGG 0.408613 2.1:+58077456 None:intergenic
CAACACCATTCGTGGCGAAT+GGG 0.410217 2.1:-58076520 MS.gene00195:CDS
TGCAAGAGGCCCAGTTATCT+TGG 0.410463 2.1:-58075567 MS.gene00195:CDS
GCCCAACCATATGGTCATTT+AGG 0.410938 2.1:-58076142 MS.gene00195:CDS
ACCTAATGGTGTTAAACAAT+TGG 0.415264 2.1:-58074820 MS.gene00195:CDS
GTGGCGAATGGGGCCTTAAT+GGG 0.417413 2.1:-58076509 MS.gene00195:intron
ATGTACAATGGTGGAGCTGC+AGG 0.421514 2.1:-58077661 MS.gene00195:CDS
AAGGTAACGGTGCCGGAAAC+CGG 0.427205 2.1:-58077513 MS.gene00195:CDS
TCACGGAAAATATTCACATT+AGG 0.428117 2.1:+58077622 None:intergenic
GATCTTCACCTGGTGTCTCT+TGG 0.428469 2.1:+58077581 None:intergenic
AGGGCCCTTGTAGAATCTAT+AGG 0.432216 2.1:+58075085 None:intergenic
AATTGAACTGAAACTTGTTT+GGG 0.433735 2.1:+58074999 None:intergenic
CTTTCCTTACATAGTCTTGT+GGG 0.435170 2.1:+58075165 None:intergenic
GTGGTGGAAATCAACTATTT+GGG 0.436251 2.1:-58075733 MS.gene00195:CDS
CTTGCCATTGACCTGATTGT+AGG 0.437042 2.1:+58076572 None:intergenic
GCAGCCGCAGCGATTAAAGC+GGG 0.437153 2.1:-58076307 MS.gene00195:CDS
CGGTATCTTGTAGGGGATAG+TGG 0.443999 2.1:+58076025 None:intergenic
GTTATCTTGGTACTCATGTC+TGG 0.444707 2.1:-58075554 MS.gene00195:CDS
GATGCAACAGTATTAGTAAT+GGG 0.446354 2.1:-58075683 MS.gene00195:CDS
TAAATTCTGCTTCAATGGAT+TGG 0.448865 2.1:+58075654 None:intergenic
GAAGTTCATGTTCACCCATT+GGG 0.449938 2.1:+58074688 None:intergenic
ACCTTGTAGTCCTTGAACAT+AGG 0.458844 2.1:+58077531 None:intergenic
CACAAAATAGCTCTAATCTT+GGG 0.462605 2.1:+58075497 None:intergenic
TGCCCAAATGGGAATACTAC+AGG 0.462649 2.1:+58075065 None:intergenic
TACGCCGCAGCCTATGTTCA+AGG 0.465511 2.1:-58077541 MS.gene00195:CDS
TGAAGTTCATGTTCACCCAT+TGG 0.465587 2.1:+58074687 None:intergenic
TGTAATGTGTTCCTACAATC+AGG 0.466500 2.1:-58076583 MS.gene00195:CDS
CTACAGTGCGGTATCTTGTA+GGG 0.467070 2.1:+58076017 None:intergenic
CATTCATCAAGCAGGATGTA+AGG 0.467983 2.1:-58075765 MS.gene00195:CDS
ATGAGATTGGGTATGTTTGA+TGG 0.471069 2.1:-58076169 MS.gene00195:CDS
CGGAAACCGGCTCAAGGTTG+CGG 0.471625 2.1:-58077500 MS.gene00195:CDS
CGTGATCCACGGTGGGGCCG+TGG 0.472058 2.1:-58077604 MS.gene00195:CDS
CTCCTTCGCAACACCATTCG+TGG 0.473076 2.1:-58076528 MS.gene00195:CDS
TTCTACTGTGGATGAATTTG+GGG 0.473863 2.1:-58074721 MS.gene00195:CDS
TACCGCACTGTAGGAGTCAT+TGG 0.476476 2.1:-58076007 MS.gene00195:CDS
ACTAGCTCTTGTTGGTGGCC+TGG 0.478030 2.1:+58075608 None:intergenic
GGTACCCACAAGACTATGTA+AGG 0.479181 2.1:-58075169 MS.gene00195:CDS
GGGCCTTTATTTCAGGTGGA+AGG 0.479444 2.1:-58075205 MS.gene00195:intron
TAATAGCACCATCGGTATGT+AGG 0.485257 2.1:+58076254 None:intergenic
AATTGTGATGAATTGGAAGT+AGG 0.485258 2.1:-58074912 MS.gene00195:CDS
ATTACAGTCCAAATGAGATT+GGG 0.485285 2.1:-58076181 MS.gene00195:CDS
GGTGAAGATCCCACCGTAGC+CGG 0.486764 2.1:-58077568 MS.gene00195:CDS
ACTTTCCTTACATAGTCTTG+TGG 0.489018 2.1:+58075164 None:intergenic
TAACTTAGTCCATGCCCAAA+TGG 0.490285 2.1:+58075053 None:intergenic
ATTGTGATGAATTGGAAGTA+GGG 0.493148 2.1:-58074911 MS.gene00195:CDS
AACTTAGTCCATGCCCAAAT+GGG 0.494495 2.1:+58075054 None:intergenic
GCAACACCATTCGTGGCGAA+TGG 0.501902 2.1:-58076521 MS.gene00195:CDS
GTTGGTTATCCTGGTCAATC+CGG 0.502401 2.1:-58075473 MS.gene00195:CDS
CGGGTGTTCTTGTGTAGTGT+TGG 0.506069 2.1:+58076338 None:intergenic
TGGATCAAAGACACGTGTTA+AGG 0.507530 2.1:-58074769 MS.gene00195:CDS
GGTTATACGACGCCGTTGCA+GGG 0.507546 2.1:-58075809 MS.gene00195:CDS
GATGGTGATGCCCAACCATA+TGG 0.507607 2.1:-58076151 MS.gene00195:CDS
ATCAGCAATGGCAGTGCCAC+CGG 0.512746 2.1:+58075454 None:intergenic
GTAGTATTCCCATTTGGGCA+TGG 0.515063 2.1:-58075062 MS.gene00195:CDS
ATCTTGGTACTCATGTCTGG+TGG 0.518730 2.1:-58075551 MS.gene00195:CDS
GTAACAGTAACATCAGAATT+GGG 0.520614 2.1:+58075983 None:intergenic
TAGGTTTCATTTCAATGCCA+AGG 0.522048 2.1:-58077425 MS.gene00195:intron
TTGTTTGGGTGCAATTGCTA+AGG 0.522717 2.1:+58075013 None:intergenic
TAGAATCTATAGGTTCTACC+TGG 0.523188 2.1:+58075095 None:intergenic
GAGTTCGGGGTCAGCACAAG+TGG 0.523605 2.1:+58076548 None:intergenic
TTTGTTACTTGAGTTTGTGA+AGG 0.524525 2.1:+58074956 None:intergenic
TCTTGGTACTCATGTCTGGT+GGG 0.525071 2.1:-58075550 MS.gene00195:CDS
GCTAGTGTCTAGAGTAGCTA+GGG 0.525581 2.1:-58075591 MS.gene00195:CDS
GTTTCGGACTGTGATTCAGT+TGG 0.526409 2.1:-58076376 MS.gene00195:CDS
CAAATTCATCCACAGTAGAA+AGG 0.527780 2.1:+58074724 None:intergenic
TGTTCCTACAATCAGGTCAA+TGG 0.527902 2.1:-58076576 MS.gene00195:CDS
GCCTATGTTCAAGGACTACA+AGG 0.529159 2.1:-58077532 MS.gene00195:CDS
CACGGCCCCACCGTGGATCA+CGG 0.530282 2.1:+58077605 None:intergenic
AACAAGCCGCAACCTTGAGC+CGG 0.530464 2.1:+58077494 None:intergenic
GTTTACTCTAAAGCACCTAA+TGG 0.532008 2.1:-58074834 MS.gene00195:CDS
TACCTTGTCTAGCTGCCTCA+AGG 0.533599 2.1:+58076080 None:intergenic
GCTACGGTGGGATCTTCACC+TGG 0.533918 2.1:+58077571 None:intergenic
GTGAAAACCATTCATCAAGC+AGG 0.534704 2.1:-58075773 MS.gene00195:CDS
TGTGAAGGCTTGAGTTTGAG+AGG 0.536301 2.1:+58074971 None:intergenic
CCCTTGCTTAATAGCACCAT+CGG 0.538410 2.1:+58076246 None:intergenic
CGCAGCGATTAAAGCGGGGT+TGG 0.540002 2.1:-58076302 MS.gene00195:CDS
CTTGTGCCTAAATGACCATA+TGG 0.540067 2.1:+58076136 None:intergenic
ACCGATGGTGCTATTAAGCA+AGG 0.541813 2.1:-58076247 MS.gene00195:CDS
ACACGTGTCTTTGATCCAGC+AGG 0.544147 2.1:+58074774 None:intergenic
TTGAAGCAGAATTTAGAGAC+AGG 0.544373 2.1:-58075646 MS.gene00195:CDS
CAGAATTTAGAGACAGGACT+GGG 0.545200 2.1:-58075640 MS.gene00195:CDS
GCGGGGTTGGACCTTGATTG+TGG 0.546649 2.1:-58076289 MS.gene00195:CDS
CTATAATGATGTTGCCCTTG+AGG 0.549480 2.1:-58076095 MS.gene00195:CDS
CACCTGGTGTCTCTTGGCCA+CGG 0.549861 2.1:+58077587 None:intergenic
TGCCTAAATGACCATATGGT+TGG 0.552046 2.1:+58076140 None:intergenic
GGACTACAAGGTAACGGTGC+CGG 0.552539 2.1:-58077520 MS.gene00195:CDS
AATAGCACCATCGGTATGTA+GGG 0.552897 2.1:+58076255 None:intergenic
TAGACACTAGCTCTTGTTGG+TGG 0.556231 2.1:+58075603 None:intergenic
TGATGCAACAGTATTAGTAA+TGG 0.558071 2.1:-58075684 MS.gene00195:CDS
AGCTAGTGTCTAGAGTAGCT+AGG 0.559008 2.1:-58075592 MS.gene00195:CDS
ACCTTGTCTAGCTGCCTCAA+GGG 0.567251 2.1:+58076081 None:intergenic
GGGGTTCGAAGAATCCCAAT+GGG 0.568718 2.1:-58074702 MS.gene00195:CDS
GCCTAAATGACCATATGGTT+GGG 0.570141 2.1:+58076141 None:intergenic
TTCAAAGCATGCGTACAGCA+AGG 0.574410 2.1:-58076618 MS.gene00195:CDS
CGCCACGAATGGTGTTGCGA+AGG 0.582571 2.1:+58076526 None:intergenic
GCAGAATTTAGAGACAGGAC+TGG 0.583998 2.1:-58075641 MS.gene00195:CDS
AGAGTAAACTAGAAGTGTGT+GGG 0.590186 2.1:+58074848 None:intergenic
GCCCTTGAGGCAGCTAGACA+AGG 0.591063 2.1:-58076082 MS.gene00195:CDS
TAGAACCTATAGATTCTACA+AGG 0.591282 2.1:-58075090 MS.gene00195:CDS
ACCAAAGATAACATCAGCAA+TGG 0.592579 2.1:+58075442 None:intergenic
TGTAAGGATGTGGCTTGTGG+TGG 0.593371 2.1:-58075749 MS.gene00195:CDS
TCAAAGCATGCGTACAGCAA+GGG 0.596427 2.1:-58076617 MS.gene00195:CDS
AGCAGCCGCAGCGATTAAAG+CGG 0.596978 2.1:-58076308 MS.gene00195:CDS
GGCCGTGGCCAAGAGACACC+AGG 0.597217 2.1:-58077589 MS.gene00195:CDS
TCTTGGCCACGGCCCCACCG+TGG 0.597961 2.1:+58077598 None:intergenic
TGGGGTTCGAAGAATCCCAA+TGG 0.598283 2.1:-58074703 MS.gene00195:CDS
TCAAAGACACGTGTTAAGGT+TGG 0.599147 2.1:-58074765 MS.gene00195:CDS
TCAAGCAGGATGTAAGGATG+TGG 0.600310 2.1:-58075759 MS.gene00195:CDS
TAGTCCTTGAACATAGGCTG+CGG 0.601475 2.1:+58077537 None:intergenic
CCTACAAGATACCGCACTGT+AGG 0.603307 2.1:-58076016 MS.gene00195:CDS
AAGGCCCCATTCGCCACGAA+TGG 0.604396 2.1:+58076515 None:intergenic
AATCCAGCAACAGGGTACCC+AGG 0.608982 2.1:-58075113 MS.gene00195:CDS
GTTATACGACGCCGTTGCAG+GGG 0.609734 2.1:-58075808 MS.gene00195:CDS
CGGTGCCGGAAACCGGCTCA+AGG 0.610422 2.1:-58077506 MS.gene00195:CDS
TTGTAACCACCTTTCTACTG+TGG 0.610513 2.1:-58074733 MS.gene00195:CDS
GCAGTGCCACCGGATTGACC+AGG 0.611310 2.1:+58075464 None:intergenic
TACAGTGCGGTATCTTGTAG+GGG 0.612738 2.1:+58076018 None:intergenic
ACAATGATAGGAAACTATGC+TGG 0.615152 2.1:-58075962 MS.gene00195:intron
AACACCATTCGTGGCGAATG+GGG 0.619009 2.1:-58076519 MS.gene00195:CDS
TAGAGTAAACTAGAAGTGTG+TGG 0.623695 2.1:+58074847 None:intergenic
GCAAGAGCAATGTACAATGG+TGG 0.623715 2.1:-58077670 MS.gene00195:CDS
ATGCGTACAGCAAGGGAAGG+TGG 0.623940 2.1:-58076610 MS.gene00195:CDS
GTGGAAGGTTGCCTAATACA+TGG 0.630180 2.1:-58075190 MS.gene00195:CDS
GGTTATCCTGGTCAATCCGG+TGG 0.631052 2.1:-58075470 MS.gene00195:CDS
ATTGTCCTTCTACAAAACAA+AGG 0.635024 2.1:-58076058 MS.gene00195:CDS
AAAATGAAGGGTCAATGGAT+GGG 0.635194 2.1:-58074872 MS.gene00195:CDS
AGGGCAACATCATTATAGGA+TGG 0.636026 2.1:+58076100 None:intergenic
AGCATGCGTACAGCAAGGGA+AGG 0.642839 2.1:-58076613 MS.gene00195:CDS
TATGATCTTGACAATTGGAA+TGG 0.644539 2.1:-58077454 MS.gene00195:CDS
ACATGAGTACCAAGATAACT+GGG 0.650193 2.1:+58075558 None:intergenic
TATCTGGCAATCCCCTGCAA+CGG 0.653055 2.1:+58075797 None:intergenic
GAAAGTACCAATGACAAACA+TGG 0.654112 2.1:-58075147 MS.gene00195:CDS
GCCCAAATGGGAATACTACA+GGG 0.654291 2.1:+58075066 None:intergenic
ATTCATCCACAGTAGAAAGG+TGG 0.654466 2.1:+58074727 None:intergenic
CCGATGGTGCTATTAAGCAA+GGG 0.656543 2.1:-58076246 MS.gene00195:CDS
AGTTCGGGGTCAGCACAAGT+GGG 0.662761 2.1:+58076549 None:intergenic
GGATGTAAGGATGTGGCTTG+TGG 0.663116 2.1:-58075752 MS.gene00195:CDS
GTTCAAGGACTACAAGGTAA+CGG 0.664819 2.1:-58077526 MS.gene00195:CDS
TGTACAATGGTGGAGCTGCA+GGG 0.675251 2.1:-58077660 MS.gene00195:CDS
AGAGTAGCTAGGGCTGCAAG+AGG 0.676621 2.1:-58075581 MS.gene00195:CDS
TGCGTCCAAATCCAGCAACA+GGG 0.678117 2.1:-58075121 MS.gene00195:CDS
ATTGGAAGTAGGGTTGCATG+TGG 0.690280 2.1:-58074901 MS.gene00195:CDS
TGGTGTTGCGAAGGAGTTCG+GGG 0.694276 2.1:+58076535 None:intergenic
AGAATCTATAGGTTCTACCT+GGG 0.699824 2.1:+58075096 None:intergenic
CAGCCGCAGCGATTAAAGCG+GGG 0.702689 2.1:-58076306 MS.gene00195:CDS
CAACCCCGCTTTAATCGCTG+CGG 0.707790 2.1:+58076303 None:intergenic
AGAACCTATAGATTCTACAA+GGG 0.725691 2.1:-58075089 MS.gene00195:CDS
GAAGCAAGAGCAATGTACAA+TGG 0.738652 2.1:-58077673 MS.gene00195:CDS
GACCAATGACTCCTACAGTG+CGG 0.764308 2.1:+58076005 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATAAAAATAAAAAAT+AGG - chr2.1:58075945-58075964 MS.gene00195:intron 0.0%
!! ATTGCAAAAAAAAAATTAAA+TGG + chr2.1:58075010-58075029 None:intergenic 10.0%
!! TATATATGTTTATAAAAAAG+GGG + chr2.1:58076452-58076471 None:intergenic 10.0%
!!! ATATATTGTATTTCTTTTAT+AGG - chr2.1:58076508-58076527 MS.gene00195:intron 10.0%
!! ATATATGTTTATAAAAAAGG+GGG + chr2.1:58076451-58076470 None:intergenic 15.0%
!! TTACACTAATAAATAATTGT+GGG + chr2.1:58075528-58075547 None:intergenic 15.0%
!! TTTACACTAATAAATAATTG+TGG + chr2.1:58075529-58075548 None:intergenic 15.0%
!!! GTATTAATATTTTTTATCTG+TGG - chr2.1:58076967-58076986 MS.gene00195:intron 15.0%
!! AAAAAATAGGTACATAGTTT+CGG - chr2.1:58075958-58075977 MS.gene00195:intron 20.0%
!! AATTAAAGTTACATCAACAA+AGG + chr2.1:58075477-58075496 None:intergenic 20.0%
!! AATTATACCATACTTATAAG+GGG - chr2.1:58074982-58075001 MS.gene00195:CDS 20.0%
!! ATTAAAGTTACATCAACAAA+GGG + chr2.1:58075476-58075495 None:intergenic 20.0%
!! CAATTATACCATACTTATAA+GGG - chr2.1:58074981-58075000 MS.gene00195:CDS 20.0%
!! TCAATTATACCATACTTATA+AGG - chr2.1:58074980-58074999 MS.gene00195:CDS 20.0%
!!! TATGAGGATTTTTATTAAAG+TGG - chr2.1:58075301-58075320 MS.gene00195:intron 20.0%
!!! TTGTAAATATTTAGCTTACT+TGG + chr2.1:58076943-58076962 None:intergenic 20.0%
!!! TTGTTATTGATAAAGACTTT+AGG - chr2.1:58075336-58075355 MS.gene00195:intron 20.0%
! AGTTTCCATAAATACAAGAT+GGG - chr2.1:58075269-58075288 MS.gene00195:intron 25.0%
! ATTATACCATACTTATAAGG+GGG - chr2.1:58074983-58075002 MS.gene00195:CDS 25.0%
! ATTTAAACAAGGATTTGGAT+TGG - chr2.1:58075648-58075667 MS.gene00195:CDS 25.0%
! CAATGATGTAGAAAACAAAA+TGG + chr2.1:58075443-58075462 None:intergenic 25.0%
! CAATGTCACAAATTTAAACA+AGG - chr2.1:58075637-58075656 MS.gene00195:CDS 25.0%
! CACAAATTTAAACAAGGATT+TGG - chr2.1:58075643-58075662 MS.gene00195:CDS 25.0%
! CTTGTTTAAATTTGTGACAT+TGG + chr2.1:58075639-58075658 None:intergenic 25.0%
! TAGTTTCCATAAATACAAGA+TGG - chr2.1:58075268-58075287 MS.gene00195:intron 25.0%
! TTAAAGTTACATCAACAAAG+GGG + chr2.1:58075475-58075494 None:intergenic 25.0%
!! AAATTGAACTGAAACTTGTT+TGG + chr2.1:58077355-58077374 None:intergenic 25.0%
!! AATGCGAATGTTGTAAATTT+TGG + chr2.1:58075566-58075585 None:intergenic 25.0%
!! AATTGAACTGAAACTTGTTT+GGG + chr2.1:58077354-58077373 None:intergenic 25.0%
!! ATGCGAATGTTGTAAATTTT+GGG + chr2.1:58075565-58075584 None:intergenic 25.0%
!! TTTTGTCATTCTATTTGTTC+TGG - chr2.1:58075235-58075254 MS.gene00195:intron 25.0%
!!! CTAATACGACTTTTTTTGTT+GGG - chr2.1:58077125-58077144 MS.gene00195:intron 25.0%
!!! TCTAATACGACTTTTTTTGT+TGG - chr2.1:58077124-58077143 MS.gene00195:intron 25.0%
!!! TTTTGTGCTTTTAAAGACTT+CGG + chr2.1:58077050-58077069 None:intergenic 25.0%
!!! TTTTTTGAGTGACAAATGTT+AGG + chr2.1:58075931-58075950 None:intergenic 25.0%
AAATTTCACCCATCCAAAAT+TGG - chr2.1:58075054-58075073 MS.gene00195:CDS 30.0%
AATAAACTACCTACCACTTT+GGG + chr2.1:58075092-58075111 None:intergenic 30.0%
AATCAATTATGCAATGCAAG+TGG + chr2.1:58075362-58075381 None:intergenic 30.0%
AATTGTGATGAATTGGAAGT+AGG - chr2.1:58077438-58077457 MS.gene00195:CDS 30.0%
ACATTATACCAACCAAAGTA+TGG - chr2.1:58075199-58075218 MS.gene00195:intron 30.0%
ACCAATTGTTTAACACCATT+AGG + chr2.1:58077534-58077553 None:intergenic 30.0%
AGAACCTATAGATTCTACAA+GGG - chr2.1:58077261-58077280 MS.gene00195:intron 30.0%
AGATGGGAAGAATTAATATG+AGG - chr2.1:58075285-58075304 MS.gene00195:intron 30.0%
ATATTAGGTCATACATACCT+TGG + chr2.1:58074945-58074964 None:intergenic 30.0%
ATCTCATTTGGACTGTAATA+AGG + chr2.1:58076168-58076187 None:intergenic 30.0%
ATGTGGATGTGAAAAATGAA+GGG - chr2.1:58077466-58077485 MS.gene00195:CDS 30.0%
ATTACAGTCCAAATGAGATT+GGG - chr2.1:58076169-58076188 MS.gene00195:CDS 30.0%
ATTCCAATTGTCAAGATCAT+AGG + chr2.1:58074897-58074916 None:intergenic 30.0%
ATTGTCCTTCTACAAAACAA+AGG - chr2.1:58076292-58076311 MS.gene00195:CDS 30.0%
ATTGTGATGAATTGGAAGTA+GGG - chr2.1:58077439-58077458 MS.gene00195:CDS 30.0%
CAAATAATACGTCCATACTT+TGG + chr2.1:58075214-58075233 None:intergenic 30.0%
CTTGCATTGCATAATTGATT+CGG - chr2.1:58075362-58075381 MS.gene00195:intron 30.0%
GATGCAACAGTATTAGTAAT+GGG - chr2.1:58076667-58076686 MS.gene00195:intron 30.0%
GATGTTACTGTTACAATGAT+AGG - chr2.1:58076376-58076395 MS.gene00195:CDS 30.0%
GTAACAGTAACATCAGAATT+GGG + chr2.1:58076370-58076389 None:intergenic 30.0%
TAAAGTTACATCAACAAAGG+GGG + chr2.1:58075474-58075493 None:intergenic 30.0%
TAAATTCTGCTTCAATGGAT+TGG + chr2.1:58076699-58076718 None:intergenic 30.0%
TAATAAACTACCTACCACTT+TGG + chr2.1:58075093-58075112 None:intergenic 30.0%
TAATATGTGGATGTTTATGC+AGG - chr2.1:58075671-58075690 MS.gene00195:CDS 30.0%
TAGAACCTATAGATTCTACA+AGG - chr2.1:58077260-58077279 MS.gene00195:intron 30.0%
TATGATCTTGACAATTGGAA+TGG - chr2.1:58074896-58074915 MS.gene00195:CDS 30.0%
TATTACAGTCCAAATGAGAT+TGG - chr2.1:58076168-58076187 MS.gene00195:CDS 30.0%
TCACGGAAAATATTCACATT+AGG + chr2.1:58074731-58074750 None:intergenic 30.0%
TCATGCAAATTGTGATGAAT+TGG - chr2.1:58077431-58077450 MS.gene00195:CDS 30.0%
TCCAGAATAAAGAGCAAATA+GGG + chr2.1:58077003-58077022 None:intergenic 30.0%
TGATGCAACAGTATTAGTAA+TGG - chr2.1:58076666-58076685 MS.gene00195:intron 30.0%
TGTAACAGTAACATCAGAAT+TGG + chr2.1:58076371-58076390 None:intergenic 30.0%
TTATACCATACTTATAAGGG+GGG - chr2.1:58074984-58075003 MS.gene00195:CDS 30.0%
TTCCAGAATAAAGAGCAAAT+AGG + chr2.1:58077004-58077023 None:intergenic 30.0%
TTCTTCCCATCTTGTATTTA+TGG + chr2.1:58075277-58075296 None:intergenic 30.0%
TTGGCAAATGTAACATCAAT+AGG + chr2.1:58076826-58076845 None:intergenic 30.0%
TTTCTACTGTGGATGAATTT+GGG - chr2.1:58077628-58077647 MS.gene00195:CDS 30.0%
! ACCTAATGGTGTTAAACAAT+TGG - chr2.1:58077530-58077549 MS.gene00195:CDS 30.0%
! ATAACTCAACCAATTTTGGA+TGG + chr2.1:58075066-58075085 None:intergenic 30.0%
! ATGAATGGTTTTCACATATC+TGG + chr2.1:58076572-58076591 None:intergenic 30.0%
! TAACTCAACCAATTTTGGAT+GGG + chr2.1:58075065-58075084 None:intergenic 30.0%
! TCTAATCTTGGGATCATTTT+TGG + chr2.1:58076845-58076864 None:intergenic 30.0%
! TGATATAGTCTTACCCATTA+AGG + chr2.1:58075857-58075876 None:intergenic 30.0%
! TTTGTTACTTGAGTTTGTGA+AGG + chr2.1:58077397-58077416 None:intergenic 30.0%
!! CAAGATTAGAGCTATTTTGT+GGG - chr2.1:58076855-58076874 MS.gene00195:intron 30.0%
!! CACAAAATAGCTCTAATCTT+GGG + chr2.1:58076856-58076875 None:intergenic 30.0%
!! TCTTTTATAGGTATTGCTTG+TGG - chr2.1:58076520-58076539 MS.gene00195:CDS 30.0%
!!! CATTTCCTTTGTTTTGTAGA+AGG + chr2.1:58076300-58076319 None:intergenic 30.0%
AAAAATGAAGGGTCAATGGA+TGG - chr2.1:58077477-58077496 MS.gene00195:CDS 35.0%
AAAATGAAGGGTCAATGGAT+GGG - chr2.1:58077478-58077497 MS.gene00195:CDS 35.0%
ACAATGATAGGAAACTATGC+TGG - chr2.1:58076388-58076407 MS.gene00195:intron 35.0%
ACAATTGGAATGGTGTAGAT+AGG - chr2.1:58074906-58074925 MS.gene00195:CDS 35.0%
ACATGAGTACCAAGATAACT+GGG + chr2.1:58076795-58076814 None:intergenic 35.0%
ACCAAAGATAACATCAGCAA+TGG + chr2.1:58076911-58076930 None:intergenic 35.0%
AGAATCTATAGGTTCTACCT+GGG + chr2.1:58077257-58077276 None:intergenic 35.0%
ATGAGATTGGGTATGTTTGA+TGG - chr2.1:58076181-58076200 MS.gene00195:CDS 35.0%
ATGTCTAAGCCATATTTGAG+TGG - chr2.1:58075149-58075168 MS.gene00195:CDS 35.0%
CAAACATACCCAATCTCATT+TGG + chr2.1:58076180-58076199 None:intergenic 35.0%
CAAATTCATCCACAGTAGAA+AGG + chr2.1:58077629-58077648 None:intergenic 35.0%
CACTAGTAACCACTCAAATA+TGG + chr2.1:58075161-58075180 None:intergenic 35.0%
CAGAATAAAGAGCAAATAGG+GGG + chr2.1:58077001-58077020 None:intergenic 35.0%
CATATTTGAGTGGTTACTAG+TGG - chr2.1:58075159-58075178 MS.gene00195:CDS 35.0%
CATGTGGATGTGAAAAATGA+AGG - chr2.1:58077465-58077484 MS.gene00195:CDS 35.0%
CCAGAATAAAGAGCAAATAG+GGG + chr2.1:58077002-58077021 None:intergenic 35.0%
CTTTCTACTGTGGATGAATT+TGG - chr2.1:58077627-58077646 MS.gene00195:CDS 35.0%
GGGGTTTGAGAAAGAAAAAA+GGG + chr2.1:58076432-58076451 None:intergenic 35.0%
GGGTTTGAGAAAGAAAAAAG+GGG + chr2.1:58076431-58076450 None:intergenic 35.0%
GGTGAACATGAACTTCAAAT+TGG - chr2.1:58077669-58077688 MS.gene00195:CDS 35.0%
GGTTTGAGAAAGAAAAAAGG+GGG + chr2.1:58076430-58076449 None:intergenic 35.0%
GTCTCTAAATTCTGCTTCAA+TGG + chr2.1:58076704-58076723 None:intergenic 35.0%
TAATACGTCCATACTTTGGT+TGG + chr2.1:58075210-58075229 None:intergenic 35.0%
TAGAATCTATAGGTTCTACC+TGG + chr2.1:58077258-58077277 None:intergenic 35.0%
TAGGTTTCATTTCAATGCCA+AGG - chr2.1:58074925-58074944 MS.gene00195:CDS 35.0%
TGTAATGTGTTCCTACAATC+AGG - chr2.1:58075767-58075786 MS.gene00195:CDS 35.0%
TGTGAAAAATGAAGGGTCAA+TGG - chr2.1:58077473-58077492 MS.gene00195:CDS 35.0%
TTCTACTGTGGATGAATTTG+GGG - chr2.1:58077629-58077648 MS.gene00195:CDS 35.0%
TTGAAGCAGAATTTAGAGAC+AGG - chr2.1:58076704-58076723 MS.gene00195:intron 35.0%
! ACTTTCCTTACATAGTCTTG+TGG + chr2.1:58077189-58077208 None:intergenic 35.0%
! AGAGTAAACTAGAAGTGTGT+GGG + chr2.1:58077505-58077524 None:intergenic 35.0%
! GCTCATAACTCAACCAATTT+TGG + chr2.1:58075070-58075089 None:intergenic 35.0%
! GTGGTGGAAATCAACTATTT+GGG - chr2.1:58076617-58076636 MS.gene00195:CDS 35.0%
! TAGAGTAAACTAGAAGTGTG+TGG + chr2.1:58077506-58077525 None:intergenic 35.0%
! TGAATATTTTCCGTGATCCA+CGG - chr2.1:58074735-58074754 MS.gene00195:CDS 35.0%
! TGTGGTGGAAATCAACTATT+TGG - chr2.1:58076616-58076635 MS.gene00195:CDS 35.0%
!! ATTAGAGCTATTTTGTGGGT+TGG - chr2.1:58076859-58076878 MS.gene00195:intron 35.0%
!! CCAAGATTAGAGCTATTTTG+TGG - chr2.1:58076854-58076873 MS.gene00195:intron 35.0%
!! CCACAAAATAGCTCTAATCT+TGG + chr2.1:58076857-58076876 None:intergenic 35.0%
!! CTTTCCTTACATAGTCTTGT+GGG + chr2.1:58077188-58077207 None:intergenic 35.0%
!! GAAAGTACCAATGACAAACA+TGG - chr2.1:58077203-58077222 MS.gene00195:intron 35.0%
!! GGATTTGGATTGGTAATATG+TGG - chr2.1:58075658-58075677 MS.gene00195:CDS 35.0%
!! GTTTACTCTAAAGCACCTAA+TGG - chr2.1:58077516-58077535 MS.gene00195:CDS 35.0%
!! TTTTGTTGGGCCTTTATTTC+AGG - chr2.1:58077138-58077157 MS.gene00195:intron 35.0%
!!! ATTTTTTATCTGTGGTCCTC+TGG - chr2.1:58076975-58076994 MS.gene00195:intron 35.0%
AACTTAGTCCATGCCCAAAT+GGG + chr2.1:58077299-58077318 None:intergenic 40.0%
AATAGCACCATCGGTATGTA+GGG + chr2.1:58076098-58076117 None:intergenic 40.0%
ACCTTGTAGTCCTTGAACAT+AGG + chr2.1:58074822-58074841 None:intergenic 40.0%
AGGGCAACATCATTATAGGA+TGG + chr2.1:58076253-58076272 None:intergenic 40.0%
ATTCATCCACAGTAGAAAGG+TGG + chr2.1:58077626-58077645 None:intergenic 40.0%
CAACCTTCCACCTGAAATAA+AGG + chr2.1:58077151-58077170 None:intergenic 40.0%
CAGAATTTAGAGACAGGACT+GGG - chr2.1:58076710-58076729 MS.gene00195:intron 40.0%
CATAAGACTTATGTTCCTGC+TGG - chr2.1:58077561-58077580 MS.gene00195:CDS 40.0%
CATTCATCAAGCAGGATGTA+AGG - chr2.1:58076585-58076604 MS.gene00195:CDS 40.0%
CCCCTATTTGCTCTTTATTC+TGG - chr2.1:58076999-58077018 MS.gene00195:intron 40.0%
CGCATATCCATGTTTGTCAT+TGG + chr2.1:58077213-58077232 None:intergenic 40.0%
CGGTATGTAGGGCTAAAAAT+GGG + chr2.1:58076087-58076106 None:intergenic 40.0%
CTAAAAATGGGCCACAATCA+AGG + chr2.1:58076075-58076094 None:intergenic 40.0%
CTATAATGATGTTGCCCTTG+AGG - chr2.1:58076255-58076274 MS.gene00195:CDS 40.0%
CTCAAGGGCAACATCATTAT+AGG + chr2.1:58076257-58076276 None:intergenic 40.0%
CTGCCTATGATCTTGACAAT+TGG - chr2.1:58074891-58074910 MS.gene00195:CDS 40.0%
CTTACATCCTGCTTGATGAA+TGG + chr2.1:58076587-58076606 None:intergenic 40.0%
CTTGTGCCTAAATGACCATA+TGG + chr2.1:58076217-58076236 None:intergenic 40.0%
GAAGCAAGAGCAATGTACAA+TGG - chr2.1:58074677-58074696 MS.gene00195:CDS 40.0%
GAAGTTCATGTTCACCCATT+GGG + chr2.1:58077665-58077684 None:intergenic 40.0%
GACATGAGTACCAAGATAAC+TGG + chr2.1:58076796-58076815 None:intergenic 40.0%
GCAGGTGAGTAAACAAGATT+TGG - chr2.1:58075689-58075708 MS.gene00195:CDS 40.0%
GCCATTGCTGATGTTATCTT+TGG - chr2.1:58076907-58076926 MS.gene00195:intron 40.0%
GCCTAAATGACCATATGGTT+GGG + chr2.1:58076212-58076231 None:intergenic 40.0%
GGGGGTTTGAGAAAGAAAAA+AGG + chr2.1:58076433-58076452 None:intergenic 40.0%
GTGAAAACCATTCATCAAGC+AGG - chr2.1:58076577-58076596 MS.gene00195:CDS 40.0%
GTTATCTTGGTACTCATGTC+TGG - chr2.1:58076796-58076815 MS.gene00195:intron 40.0%
GTTCAAGGACTACAAGGTAA+CGG - chr2.1:58074824-58074843 MS.gene00195:CDS 40.0%
TAACTTAGTCCATGCCCAAA+TGG + chr2.1:58077300-58077319 None:intergenic 40.0%
TAATAGCACCATCGGTATGT+AGG + chr2.1:58076099-58076118 None:intergenic 40.0%
TCAAAGACACGTGTTAAGGT+TGG - chr2.1:58077585-58077604 MS.gene00195:CDS 40.0%
TCGGTATGTAGGGCTAAAAA+TGG + chr2.1:58076088-58076107 None:intergenic 40.0%
TCTTGTGGGTACCATGTATT+AGG + chr2.1:58077174-58077193 None:intergenic 40.0%
TGAAGTTCATGTTCACCCAT+TGG + chr2.1:58077666-58077685 None:intergenic 40.0%
TGCCTAAATGACCATATGGT+TGG + chr2.1:58076213-58076232 None:intergenic 40.0%
TGGATCAAAGACACGTGTTA+AGG - chr2.1:58077581-58077600 MS.gene00195:CDS 40.0%
TGTTCCTACAATCAGGTCAA+TGG - chr2.1:58075774-58075793 MS.gene00195:CDS 40.0%
TTGTAACCACCTTTCTACTG+TGG - chr2.1:58077617-58077636 MS.gene00195:CDS 40.0%
TTGTTTGGGTGCAATTGCTA+AGG + chr2.1:58077340-58077359 None:intergenic 40.0%
!! TGTGCTTTTAAAGACTTCGG+AGG + chr2.1:58077047-58077066 None:intergenic 40.0%
!! TTTTTAGCCCTACATACCGA+TGG - chr2.1:58076088-58076107 MS.gene00195:CDS 40.0%
!!! ATTTTGTGGGTTGGTTATCC+TGG - chr2.1:58076868-58076887 MS.gene00195:intron 40.0%
AATGGCCCCCCTTATAAGTA+TGG + chr2.1:58074992-58075011 None:intergenic 45.0%
AGGGCCCTTGTAGAATCTAT+AGG + chr2.1:58077268-58077287 None:intergenic 45.0%
AGTTATGAGCCCAAAGTGGT+AGG - chr2.1:58075080-58075099 MS.gene00195:CDS 45.0%
ATCTTGGTACTCATGTCTGG+TGG - chr2.1:58076799-58076818 MS.gene00195:intron 45.0%
ATTGGAAGTAGGGTTGCATG+TGG - chr2.1:58077449-58077468 MS.gene00195:CDS 45.0%
CCCTTGCTTAATAGCACCAT+CGG + chr2.1:58076107-58076126 None:intergenic 45.0%
CTACAGTGCGGTATCTTGTA+GGG + chr2.1:58076336-58076355 None:intergenic 45.0%
CTTGCCATTGACCTGATTGT+AGG + chr2.1:58075781-58075800 None:intergenic 45.0%
GCAAGAGCAATGTACAATGG+TGG - chr2.1:58074680-58074699 MS.gene00195:CDS 45.0%
GCAGAATTTAGAGACAGGAC+TGG - chr2.1:58076709-58076728 MS.gene00195:intron 45.0%
GCCCAAATGGGAATACTACA+GGG + chr2.1:58077287-58077306 None:intergenic 45.0%
GCCCAACCATATGGTCATTT+AGG - chr2.1:58076208-58076227 MS.gene00195:CDS 45.0%
GCCCTGTAGTATTCCCATTT+GGG - chr2.1:58077283-58077302 MS.gene00195:intron 45.0%
GCCTATGTTCAAGGACTACA+AGG - chr2.1:58074818-58074837 MS.gene00195:CDS 45.0%
GGTACCCACAAGACTATGTA+AGG - chr2.1:58077181-58077200 MS.gene00195:intron 45.0%
GTAGTATTCCCATTTGGGCA+TGG - chr2.1:58077288-58077307 MS.gene00195:intron 45.0%
GTGGAAGGTTGCCTAATACA+TGG - chr2.1:58077160-58077179 MS.gene00195:intron 45.0%
GTTGAGTTATGAGCCCAAAG+TGG - chr2.1:58075076-58075095 MS.gene00195:CDS 45.0%
GTTGGTTATCCTGGTCAATC+CGG - chr2.1:58076877-58076896 MS.gene00195:intron 45.0%
GTTTCGGACTGTGATTCAGT+TGG - chr2.1:58075974-58075993 MS.gene00195:CDS 45.0%
TACAGTGCGGTATCTTGTAG+GGG + chr2.1:58076335-58076354 None:intergenic 45.0%
TAGTCCTTGAACATAGGCTG+CGG + chr2.1:58074816-58074835 None:intergenic 45.0%
TCAAAGCATGCGTACAGCAA+GGG - chr2.1:58075733-58075752 MS.gene00195:CDS 45.0%
TCAAGCAGGATGTAAGGATG+TGG - chr2.1:58076591-58076610 MS.gene00195:CDS 45.0%
TCTTGGTACTCATGTCTGGT+GGG - chr2.1:58076800-58076819 MS.gene00195:intron 45.0%
TGCCCAAATGGGAATACTAC+AGG + chr2.1:58077288-58077307 None:intergenic 45.0%
TGTGAAGGCTTGAGTTTGAG+AGG + chr2.1:58077382-58077401 None:intergenic 45.0%
TTCAAAGCATGCGTACAGCA+AGG - chr2.1:58075732-58075751 MS.gene00195:CDS 45.0%
! AGCTAGTGTCTAGAGTAGCT+AGG - chr2.1:58076758-58076777 MS.gene00195:intron 45.0%
! ATATTTTCCGTGATCCACGG+TGG - chr2.1:58074738-58074757 MS.gene00195:CDS 45.0%
! CTCTAGACACTAGCTCTTGT+TGG + chr2.1:58076753-58076772 None:intergenic 45.0%
! GCTAGTGTCTAGAGTAGCTA+GGG - chr2.1:58076759-58076778 MS.gene00195:intron 45.0%
! TAGACACTAGCTCTTGTTGG+TGG + chr2.1:58076750-58076769 None:intergenic 45.0%
! TATTTTCCGTGATCCACGGT+GGG - chr2.1:58074739-58074758 MS.gene00195:CDS 45.0%
! TGCTGTACGCATGCTTTGAA+TGG + chr2.1:58075732-58075751 None:intergenic 45.0%
! TGTTGGGCCTTTATTTCAGG+TGG - chr2.1:58077141-58077160 MS.gene00195:intron 45.0%
!! AATGGTGTTGCGAAGGAGTT+CGG + chr2.1:58075820-58075839 None:intergenic 45.0%
!! ACCGATGGTGCTATTAAGCA+AGG - chr2.1:58076103-58076122 MS.gene00195:CDS 45.0%
!! CCGATGGTGCTATTAAGCAA+GGG - chr2.1:58076104-58076123 MS.gene00195:CDS 45.0%
!! ACAAATAAAATTATAATATT+AGG + chr2.1:58074960-58074979 None:intergenic 5.0%
!! TTATATATGTTTATAAAAAA+GGG + chr2.1:58076453-58076472 None:intergenic 5.0%
!! TTTATATATGTTTATAAAAA+AGG + chr2.1:58076454-58076473 None:intergenic 5.0%
AACACCATTCGTGGCGAATG+GGG - chr2.1:58075831-58075850 MS.gene00195:intron 50.0%
ACACGTGTCTTTGATCCAGC+AGG + chr2.1:58077579-58077598 None:intergenic 50.0%
ACCTTGTCTAGCTGCCTCAA+GGG + chr2.1:58076272-58076291 None:intergenic 50.0%
AGTGGTTACTAGTGGCGCAT+GGG - chr2.1:58075167-58075186 MS.gene00195:CDS 50.0%
ATGCGTCCAAATCCAGCAAC+AGG - chr2.1:58077228-58077247 MS.gene00195:intron 50.0%
CAACACCATTCGTGGCGAAT+GGG - chr2.1:58075830-58075849 MS.gene00195:intron 50.0%
CCTACAAGATACCGCACTGT+AGG - chr2.1:58076334-58076353 MS.gene00195:CDS 50.0%
CCTACAGTGCGGTATCTTGT+AGG + chr2.1:58076337-58076356 None:intergenic 50.0%
CGGGTGTTCTTGTGTAGTGT+TGG + chr2.1:58076015-58076034 None:intergenic 50.0%
CGGTATCTTGTAGGGGATAG+TGG + chr2.1:58076328-58076347 None:intergenic 50.0%
GACCAATGACTCCTACAGTG+CGG + chr2.1:58076348-58076367 None:intergenic 50.0%
GATCTTCACCTGGTGTCTCT+TGG + chr2.1:58074772-58074791 None:intergenic 50.0%
GGATGTAAGGATGTGGCTTG+TGG - chr2.1:58076598-58076617 MS.gene00195:CDS 50.0%
GGCCCTGTAGTATTCCCATT+TGG - chr2.1:58077282-58077301 MS.gene00195:intron 50.0%
GGGGTTCGAAGAATCCCAAT+GGG - chr2.1:58077648-58077667 MS.gene00195:CDS 50.0%
TACCGCACTGTAGGAGTCAT+TGG - chr2.1:58076343-58076362 MS.gene00195:CDS 50.0%
TACCTTGTCTAGCTGCCTCA+AGG + chr2.1:58076273-58076292 None:intergenic 50.0%
TATCTGGCAATCCCCTGCAA+CGG + chr2.1:58076556-58076575 None:intergenic 50.0%
TGCAAGAGGCCCAGTTATCT+TGG - chr2.1:58076783-58076802 MS.gene00195:intron 50.0%
TGCGTCCAAATCCAGCAACA+GGG - chr2.1:58077229-58077248 MS.gene00195:intron 50.0%
TGGGGTTCGAAGAATCCCAA+TGG - chr2.1:58077647-58077666 MS.gene00195:CDS 50.0%
! AGGACTGGGCTTCTTTTACC+AGG - chr2.1:58076724-58076743 MS.gene00195:intron 50.0%
! ATAGGCTGCGGCGTATTTTC+CGG + chr2.1:58074804-58074823 None:intergenic 50.0%
! ATGTACAATGGTGGAGCTGC+AGG - chr2.1:58074689-58074708 MS.gene00195:CDS 50.0%
! ATTTTCCGTGATCCACGGTG+GGG - chr2.1:58074740-58074759 MS.gene00195:CDS 50.0%
! GATGGTGATGCCCAACCATA+TGG - chr2.1:58076199-58076218 MS.gene00195:CDS 50.0%
! GGGCCTTTATTTCAGGTGGA+AGG - chr2.1:58077145-58077164 MS.gene00195:intron 50.0%
! TGTAAGGATGTGGCTTGTGG+TGG - chr2.1:58076601-58076620 MS.gene00195:CDS 50.0%
! TGTACAATGGTGGAGCTGCA+GGG - chr2.1:58074690-58074709 MS.gene00195:CDS 50.0%
!! ATGGTGTTGCGAAGGAGTTC+GGG + chr2.1:58075819-58075838 None:intergenic 50.0%
!! GAGCTGCAGGGTTGACTTTT+TGG - chr2.1:58074702-58074721 MS.gene00195:CDS 50.0%
AACAAGCCGCAACCTTGAGC+CGG + chr2.1:58074859-58074878 None:intergenic 55.0%
AAGAGCAAATAGGGGGCCAG+AGG + chr2.1:58076994-58077013 None:intergenic 55.0%
AGAGTAGCTAGGGCTGCAAG+AGG - chr2.1:58076769-58076788 MS.gene00195:intron 55.0%
AGCAGCCGCAGCGATTAAAG+CGG - chr2.1:58076042-58076061 MS.gene00195:CDS 55.0%
AGCATGCGTACAGCAAGGGA+AGG - chr2.1:58075737-58075756 MS.gene00195:CDS 55.0%
AGTTCGGGGTCAGCACAAGT+GGG + chr2.1:58075804-58075823 None:intergenic 55.0%
ATCAGCAATGGCAGTGCCAC+CGG + chr2.1:58076899-58076918 None:intergenic 55.0%
ATGCGTACAGCAAGGGAAGG+TGG - chr2.1:58075740-58075759 MS.gene00195:CDS 55.0%
CAACCCCGCTTTAATCGCTG+CGG + chr2.1:58076050-58076069 None:intergenic 55.0%
CTCCTTCGCAACACCATTCG+TGG - chr2.1:58075822-58075841 MS.gene00195:CDS 55.0%
GAGTGGTTACTAGTGGCGCA+TGG - chr2.1:58075166-58075185 MS.gene00195:CDS 55.0%
GCAACACCATTCGTGGCGAA+TGG - chr2.1:58075829-58075848 MS.gene00195:intron 55.0%
GGGTACCCTGTTGCTGGATT+TGG + chr2.1:58077237-58077256 None:intergenic 55.0%
GGTTATACGACGCCGTTGCA+GGG - chr2.1:58076541-58076560 MS.gene00195:CDS 55.0%
GGTTATCCTGGTCAATCCGG+TGG - chr2.1:58076880-58076899 MS.gene00195:intron 55.0%
GTGGCGAATGGGGCCTTAAT+GGG - chr2.1:58075841-58075860 MS.gene00195:intron 55.0%
GTTATACGACGCCGTTGCAG+GGG - chr2.1:58076542-58076561 MS.gene00195:CDS 55.0%
TACGCCGCAGCCTATGTTCA+AGG - chr2.1:58074809-58074828 MS.gene00195:CDS 55.0%
TGGTTATACGACGCCGTTGC+AGG - chr2.1:58076540-58076559 MS.gene00195:CDS 55.0%
! AAGGTAACGGTGCCGGAAAC+CGG - chr2.1:58074837-58074856 MS.gene00195:CDS 55.0%
! AATCCAGCAACAGGGTACCC+AGG - chr2.1:58077237-58077256 MS.gene00195:intron 55.0%
! GCGTATTTTCCGGCTACGGT+GGG + chr2.1:58074794-58074813 None:intergenic 55.0%
! GGACTACAAGGTAACGGTGC+CGG - chr2.1:58074830-58074849 MS.gene00195:CDS 55.0%
! TGCGGCGTATTTTCCGGCTA+CGG + chr2.1:58074798-58074817 None:intergenic 55.0%
!! ACTAGCTCTTGTTGGTGGCC+TGG + chr2.1:58076745-58076764 None:intergenic 55.0%
!! TGGTGTTGCGAAGGAGTTCG+GGG + chr2.1:58075818-58075837 None:intergenic 55.0%
AAGGCCCCATTCGCCACGAA+TGG + chr2.1:58075838-58075857 None:intergenic 60.0%
CACCTGGTGTCTCTTGGCCA+CGG + chr2.1:58074766-58074785 None:intergenic 60.0%
CAGCCGCAGCGATTAAAGCG+GGG - chr2.1:58076044-58076063 MS.gene00195:CDS 60.0%
CGCAGCGATTAAAGCGGGGT+TGG - chr2.1:58076048-58076067 MS.gene00195:CDS 60.0%
CGTGGCGAATGGGGCCTTAA+TGG - chr2.1:58075840-58075859 MS.gene00195:intron 60.0%
CTACCTGGGTACCCTGTTGC+TGG + chr2.1:58077243-58077262 None:intergenic 60.0%
GAGTTCGGGGTCAGCACAAG+TGG + chr2.1:58075805-58075824 None:intergenic 60.0%
GCAGCCGCAGCGATTAAAGC+GGG - chr2.1:58076043-58076062 MS.gene00195:CDS 60.0%
GCCCTTGAGGCAGCTAGACA+AGG - chr2.1:58076268-58076287 MS.gene00195:CDS 60.0%
GCGGGGTTGGACCTTGATTG+TGG - chr2.1:58076061-58076080 MS.gene00195:CDS 60.0%
GCTACGGTGGGATCTTCACC+TGG + chr2.1:58074782-58074801 None:intergenic 60.0%
GGTGAAGATCCCACCGTAGC+CGG - chr2.1:58074782-58074801 MS.gene00195:CDS 60.0%
! CGCAACCTTGAGCCGGTTTC+CGG + chr2.1:58074852-58074871 None:intergenic 60.0%
! CGGAAACCGGCTCAAGGTTG+CGG - chr2.1:58074850-58074869 MS.gene00195:CDS 60.0%
! GGCGTATTTTCCGGCTACGG+TGG + chr2.1:58074795-58074814 None:intergenic 60.0%
!! CGCCACGAATGGTGTTGCGA+AGG + chr2.1:58075827-58075846 None:intergenic 60.0%
GCAGTGCCACCGGATTGACC+AGG + chr2.1:58076889-58076908 None:intergenic 65.0%
! CGCTGCGGCTGCTGCTTCTT+CGG + chr2.1:58076035-58076054 None:intergenic 65.0%
! GCTGCGGCTGCTGCTTCTTC+GGG + chr2.1:58076034-58076053 None:intergenic 65.0%
CACGGCCCCACCGTGGATCA+CGG + chr2.1:58074748-58074767 None:intergenic 70.0%
GGCCGTGGCCAAGAGACACC+AGG - chr2.1:58074761-58074780 MS.gene00195:CDS 70.0%
! CGGTGCCGGAAACCGGCTCA+AGG - chr2.1:58074844-58074863 MS.gene00195:CDS 70.0%
CGTGATCCACGGTGGGGCCG+TGG - chr2.1:58074746-58074765 MS.gene00195:CDS 75.0%
TCTTGGCCACGGCCCCACCG+TGG + chr2.1:58074755-58074774 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 58074659 58077713 58074659 ID=MS.gene00195
chr2.1 mRNA 58074659 58077713 58074659 ID=MS.gene00195.t1;Parent=MS.gene00195
chr2.1 exon 58077426 58077713 58077426 ID=MS.gene00195.t1.exon1;Parent=MS.gene00195.t1
chr2.1 CDS 58077426 58077713 58077426 ID=cds.MS.gene00195.t1;Parent=MS.gene00195.t1
chr2.1 exon 58076510 58076679 58076510 ID=MS.gene00195.t1.exon2;Parent=MS.gene00195.t1
chr2.1 CDS 58076510 58076679 58076510 ID=cds.MS.gene00195.t1;Parent=MS.gene00195.t1
chr2.1 exon 58075963 58076405 58075963 ID=MS.gene00195.t1.exon3;Parent=MS.gene00195.t1
chr2.1 CDS 58075963 58076405 58075963 ID=cds.MS.gene00195.t1;Parent=MS.gene00195.t1
chr2.1 exon 58075429 58075842 58075429 ID=MS.gene00195.t1.exon4;Parent=MS.gene00195.t1
chr2.1 CDS 58075429 58075842 58075429 ID=cds.MS.gene00195.t1;Parent=MS.gene00195.t1
chr2.1 exon 58074659 58075212 58074659 ID=MS.gene00195.t1.exon5;Parent=MS.gene00195.t1
chr2.1 CDS 58074659 58075212 58074659 ID=cds.MS.gene00195.t1;Parent=MS.gene00195.t1
Gene Sequence

>MS.gene00195

ATGCAGATTGTGTCTGATGAAGCAAGAGCAATGTACAATGGTGGAGCTGCAGGGTTGACTTTTTGGAGTCCTAATGTGAATATTTTCCGTGATCCACGGTGGGGCCGTGGCCAAGAGACACCAGGTGAAGATCCCACCGTAGCCGGAAAATACGCCGCAGCCTATGTTCAAGGACTACAAGGTAACGGTGCCGGAAACCGGCTCAAGGTTGCGGCTTGTTGTAAACATTACACTGCCTATGATCTTGACAATTGGAATGGTGTAGATAGGTTTCATTTCAATGCCAAGGTATGTATGACCTAATATTATAATTTTATTTGTTCAATTATACCATACTTATAAGGGGGGCCATTTAATTTTTTTTTTGCAATTATTTGAAAATTATTATTTATATGAAATTTCACCCATCCAAAATTGGTTGAGTTATGAGCCCAAAGTGGTAGGTAGTTTATTACACTTTTTAAGAGCAATGTTCTCAATTTTCATGTGCATGTCTAAGCCATATTTGAGTGGTTACTAGTGGCGCATGGGTGTACAGTCACATTATACCAACCAAAGTATGGACGTATTATTTGCTTTTGTCATTCTATTTGTTCTGGTTCAAAGAAGTAGTTTCCATAAATACAAGATGGGAAGAATTAATATGAGGATTTTTATTAAAGTGGAAGTTATGCAAGTTGTTATTGATAAAGACTTTAGGCCACTTGCATTGCATAATTGATTCGGTTAAATGATAGTGATGTTCATTCAAACTATCAAATTATCACTTGTGCATCATAAACCATTTTGTTTTCTACATCATTGATTAGTAACCCCCTTTGTTGATGTAACTTTAATTGAAAAAAAATATTTTGTAGAAGAATTTACCCACAATTATTTATTAGTGTAAATCAAATTTGATATCCCAAAATTTACAACATTCGCATTATGCATCAATTACTTGCGCTAATAATATTGATAGAGTAAATATTCATTAACCAATGTCACAAATTTAAACAAGGATTTGGATTGGTAATATGTGGATGTTTATGCAGGTGAGTAAACAAGATTTGGCAGACACATATGATGTTCCATTCAAAGCATGCGTACAGCAAGGGAAGGTGGCAAGTGTAATGTGTTCCTACAATCAGGTCAATGGCAAGCCCACTTGTGCTGACCCCGAACTCCTTCGCAACACCATTCGTGGCGAATGGGGCCTTAATGGGTAAGACTATATCATGTTGTTATCATTTCTCTTCGTTAATATCATGAGTTTAATTTTGCATTTTTCCTAACATTTGTCACTCAAAAAATAAAAATAAAAAATAGGTACATAGTTTCGGACTGTGATTCAGTTGGAGTTTTATACGACAACCAACACTACACAAGAACACCCGAAGAAGCAGCAGCCGCAGCGATTAAAGCGGGGTTGGACCTTGATTGTGGCCCATTTTTAGCCCTACATACCGATGGTGCTATTAAGCAAGGGCTTATTTCAGAAAATGATCTTAATCTTGCTTTAGCTAACCTTATTACAGTCCAAATGAGATTGGGTATGTTTGATGGTGATGCCCAACCATATGGTCATTTAGGCACAAGAGATATGTGTTTACCATCCTATAATGATGTTGCCCTTGAGGCAGCTAGACAAGGTATTGTCCTTCTACAAAACAAAGGAAATGCATTACCACTATCCCCTACAAGATACCGCACTGTAGGAGTCATTGGTCCCAATTCTGATGTTACTGTTACAATGATAGGAAACTATGCTGGTTAGTTACTTCTCAAACCCCCTTTTTTCTTTCTCAAACCCCCTTTTTTATAAACATATATAAACTACATATCATTAGAAATAGTAATTTTAATATCAATATATTGTATTTCTTTTATAGGTATTGCTTGTGGTTATACGACGCCGTTGCAGGGGATTGCCAGATATGTGAAAACCATTCATCAAGCAGGATGTAAGGATGTGGCTTGTGGTGGAAATCAACTATTTGGGCTTTCAGAGCAAGTAGCAAGACAAGCTGATGCAACAGTATTAGTAATGGGCTTAGACCAATCCATTGAAGCAGAATTTAGAGACAGGACTGGGCTTCTTTTACCAGGCCACCAACAAGAGCTAGTGTCTAGAGTAGCTAGGGCTGCAAGAGGCCCAGTTATCTTGGTACTCATGTCTGGTGGGCCTATTGATGTTACATTTGCCAAAAATGATCCCAAGATTAGAGCTATTTTGTGGGTTGGTTATCCTGGTCAATCCGGTGGCACTGCCATTGCTGATGTTATCTTTGGTAGAACTAATCCAAGTAAGCTAAATATTTACAAATTAGTATTAATATTTTTTATCTGTGGTCCTCTGGCCCCCTATTTGCTCTTTATTCTGGAAAAAAAATCTTTGAAAATTATCCTCCGAAGTCTTTAAAAGCACAAAAATACAGTTCATGAGTTATCTCTCAAATGACTTGCGCGATTTGAATTTTTTTGCATCTAATACGACTTTTTTTGTTGGGCCTTTATTTCAGGTGGAAGGTTGCCTAATACATGGTACCCACAAGACTATGTAAGGAAAGTACCAATGACAAACATGGATATGCGTCCAAATCCAGCAACAGGGTACCCAGGTAGAACCTATAGATTCTACAAGGGCCCTGTAGTATTCCCATTTGGGCATGGACTAAGTTACTCAAGATTCACACACTCCTTAGCAATTGCACCCAAACAAGTTTCAGTTCAATTTACAACCTCTCAAACTCAAGCCTTCACAAACTCAAGTAACAAAGCAATGAAAGTGAGTCATGCAAATTGTGATGAATTGGAAGTAGGGTTGCATGTGGATGTGAAAAATGAAGGGTCAATGGATGGGTCCCACACACTTCTAGTTTACTCTAAAGCACCTAATGGTGTTAAACAATTGGTCAACTTTCATAAGACTTATGTTCCTGCTGGATCAAAGACACGTGTTAAGGTTGGTGTTCATGTTTGTAACCACCTTTCTACTGTGGATGAATTTGGGGTTCGAAGAATCCCAATGGGTGAACATGAACTTCAAATTGGTGATCTCAAACATTCTATTTTG
Protein sequence

>MS.gene00195.t1

MQIVSDEARAMYNGGAAGLTFWSPNVNIFRDPRWGRGQETPGEDPTVAGKYAAAYVQGLQGNGAGNRLKVAACCKHYTAYDLDNWNGVDRFHFNAKVSKQDLADTYDVPFKACVQQGKVASVMCSYNQVNGKPTCADPELLRNTIRGEWGLNGYIVSDCDSVGVLYDNQHYTRTPEEAAAAAIKAGLDLDCGPFLALHTDGAIKQGLISENDLNLALANLITVQMRLGMFDGDAQPYGHLGTRDMCLPSYNDVALEAARQGIVLLQNKGNALPLSPTRYRTVGVIGPNSDVTVTMIGNYAGIACGYTTPLQGIARYVKTIHQAGCKDVACGGNQLFGLSEQVARQADATVLVMGLDQSIEAEFRDRTGLLLPGHQQELVSRVARAARGPVILVLMSGGPIDVTFAKNDPKIRAILWVGYPGQSGGTAIADVIFGRTNPSGRLPNTWYPQDYVRKVPMTNMDMRPNPATGYPGRTYRFYKGPVVFPFGHGLSYSRFTHSLAIAPKQVSVQFTTSQTQAFTNSSNKAMKVSHANCDELEVGLHVDVKNEGSMDGSHTLLVYSKAPNGVKQLVNFHKTYVPAGSKTRVKVGVHVCNHLSTVDEFGVRRIPMGEHELQIGDLKHSIL