AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene07274

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07274.t1 MTR_1g087240 95.556 765 28 1 1 759 1 765 0.0 1514
MS.gene07274.t1 MTR_7g109390 81.438 765 133 3 3 759 8 771 0.0 1297
MS.gene07274.t1 MTR_2g034720 68.016 766 222 8 5 758 7 761 0.0 1057
MS.gene07274.t1 MTR_2g008240 55.906 762 318 6 4 750 16 774 0.0 872
MS.gene07274.t1 MTR_4g094285 56.143 757 314 6 8 749 19 772 0.0 865
MS.gene07274.t1 MTR_1g106860 53.080 763 329 8 2 741 3 759 0.0 801
MS.gene07274.t1 MTR_5g030860 46.479 781 378 12 3 750 8 781 0.0 730
MS.gene07274.t1 MTR_3g074060 48.000 775 364 13 5 749 9 774 0.0 724
MS.gene07274.t1 MTR_5g062430 46.506 787 370 13 3 749 5 780 0.0 707
MS.gene07274.t1 MTR_5g062320 46.134 789 374 13 1 749 1 778 0.0 703
MS.gene07274.t1 MTR_5g062370 46.338 792 374 13 3 754 5 785 0.0 697
MS.gene07274.t1 MTR_5g062650 45.026 784 382 15 5 749 10 783 0.0 681
MS.gene07274.t1 MTR_5g062370 50.085 585 263 8 3 560 5 587 0.0 581
MS.gene07274.t1 MTR_3g462820 24.738 667 365 28 27 615 12 619 3.17e-33 136
MS.gene07274.t1 MTR_6g028120 25.414 665 352 25 29 612 1 602 5.21e-33 135
MS.gene07274.t1 MTR_5g069800 26.486 589 328 27 62 612 80 601 7.34e-33 135
MS.gene07274.t1 MTR_6g028110 23.802 668 371 26 23 612 15 622 1.23e-31 131
MS.gene07274.t1 MTR_6g028110 23.802 668 371 26 23 612 15 622 2.10e-31 131
MS.gene07274.t1 MTR_6g028090 24.292 671 360 26 25 612 16 621 2.30e-30 127
MS.gene07274.t1 MTR_5g069740 26.072 583 326 26 62 612 80 589 2.63e-30 127
MS.gene07274.t1 MTR_6g028100 23.916 669 357 27 29 612 20 621 3.64e-30 127
MS.gene07274.t1 MTR_7g086030 23.566 645 359 27 44 612 11 597 3.21e-26 114
MS.gene07274.t1 MTR_7g086030 23.566 645 359 27 44 612 36 622 6.74e-26 114
MS.gene07274.t1 MTR_2g030000 24.167 600 343 22 43 568 36 597 2.05e-24 109
MS.gene07274.t1 MTR_3g079750 24.618 654 342 29 3 568 5 595 1.64e-23 106
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07274.t1 AT1G02640 72.585 766 197 4 3 759 7 768 0.0 1158
MS.gene07274.t1 AT5G49360 69.191 766 217 10 2 752 12 773 0.0 1058
MS.gene07274.t1 AT5G64570 57.908 765 299 8 5 750 23 783 0.0 889
MS.gene07274.t1 AT5G09730 56.065 742 307 7 23 749 34 771 0.0 846
MS.gene07274.t1 AT3G19620 54.459 740 318 6 18 741 22 758 0.0 843
MS.gene07274.t1 AT5G64570 59.300 629 243 5 131 750 1 625 0.0 771
MS.gene07274.t1 AT5G64570 63.112 572 196 6 5 563 23 592 0.0 720
MS.gene07274.t1 AT5G10560 45.101 796 383 11 3 750 2 791 0.0 712
MS.gene07274.t1 AT1G78060 46.640 744 366 11 22 742 23 758 0.0 708
MS.gene07274.t1 AT5G09700 54.071 479 211 4 273 745 45 520 0.0 529
MS.gene07274.t1 AT3G47000 27.422 609 313 26 43 568 16 578 1.09e-35 144
MS.gene07274.t1 AT3G47050 26.508 630 322 26 29 570 2 578 7.12e-34 138
MS.gene07274.t1 AT3G47040 24.127 659 347 26 43 615 16 607 1.95e-32 134
MS.gene07274.t1 AT3G47010 24.838 616 324 27 43 570 17 581 3.88e-29 124
MS.gene07274.t1 AT3G47040 23.294 674 359 26 43 615 16 632 5.45e-29 123
MS.gene07274.t1 AT3G47010 24.267 614 329 25 43 570 17 580 2.83e-28 121
MS.gene07274.t1 AT5G04885 24.962 653 344 23 2 568 4 596 9.56e-28 119
MS.gene07274.t1 AT5G04885 24.962 653 344 23 2 568 4 596 9.56e-28 119
MS.gene07274.t1 AT5G04885 24.962 653 344 23 2 568 21 613 1.14e-27 119
MS.gene07274.t1 AT3G62710 25.771 551 331 24 96 612 143 649 2.27e-27 118
MS.gene07274.t1 AT3G47000 28.767 438 215 19 43 411 16 425 2.74e-27 116
MS.gene07274.t1 AT3G47040 26.136 440 224 17 43 411 16 425 2.94e-24 107
MS.gene07274.t1 AT5G20950 24.660 661 349 30 35 612 24 618 3.32e-24 108
MS.gene07274.t1 AT5G20950 24.660 661 349 30 35 612 24 618 3.32e-24 108
MS.gene07274.t1 AT5G20950 24.736 663 346 30 35 612 102 696 6.33e-24 108
MS.gene07274.t1 AT3G47010 26.258 457 236 19 43 428 17 443 2.35e-22 101
MS.gene07274.t1 AT3G47000 26.869 428 251 18 174 568 3 401 2.55e-22 100
MS.gene07274.t1 AT3G47040 23.327 493 293 20 158 615 198 640 3.51e-21 99.0
MS.gene07274.t1 AT3G47010 24.272 412 254 16 184 570 24 402 4.23e-20 94.4
MS.gene07274.t1 AT5G20940 24.613 581 351 23 61 611 98 621 6.35e-20 95.1
MS.gene07274.t1 AT3G47050 25.445 393 193 14 29 350 2 365 8.84e-18 86.7

Find 220 sgRNAs with CRISPR-Local

Find 405 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGCTTATGATCTTGATAAT+TGG 0.176588 1.4:+69523695 MS.gene07274:CDS
TGCAATGATGATAAGCAATT+TGG 0.200628 1.4:+69525096 MS.gene07274:CDS
GTGTAACTAGCCTGCTTTAA+TGG 0.213949 1.4:-69524277 None:intergenic
ACACGTTCAATGTGCCATTT+AGG 0.256161 1.4:+69523951 MS.gene07274:CDS
TGTTCTTACAATCAGGTTAA+TGG 0.264019 1.4:+69524010 MS.gene07274:CDS
TTGAGTGTGGTTGATAAGTC+TGG 0.284224 1.4:+69526381 MS.gene07274:CDS
ACCGGAACTGACACCACTTT+TGG 0.310123 1.4:-69526093 None:intergenic
TCCTTCACACACATCCTAAA+TGG 0.313797 1.4:-69523965 None:intergenic
CAAACATTCCTAACCTCATT+TGG 0.313898 1.4:-69524523 None:intergenic
AACATCAACGTCAAGTCTAA+TGG 0.326086 1.4:-69526190 None:intergenic
CTCGAGAGGCCCAACCATTT+TGG 0.326495 1.4:+69525263 MS.gene07274:CDS
AACAGACAGTAGTCGGTTAA+AGG 0.343289 1.4:+69523648 MS.gene07274:CDS
GAATGGCTGGGTTGACATAC+TGG 0.348172 1.4:+69523509 MS.gene07274:CDS
AGCTAGTGGCAGCTGGGAAT+TGG 0.353343 1.4:-69523293 None:intergenic
GATTGTTACAGGTTTGGATT+TGG 0.354260 1.4:+69524400 MS.gene07274:intron
AGGACTGGTTTACTTCTTCC+TGG 0.354806 1.4:+69525204 MS.gene07274:CDS
TCATTCACCCTTGTTGGTAT+AGG 0.360034 1.4:-69522090 None:intergenic
TTAACCGAAACTGATGTAAA+TGG 0.366495 1.4:+69524476 MS.gene07274:CDS
AGCACCATTTACATCAGTTT+CGG 0.369750 1.4:-69524480 None:intergenic
GCATGCCACATTCGCACATC+CGG 0.370181 1.4:-69525076 None:intergenic
AATTGTTCCCTTTAGAAGAT+TGG 0.370516 1.4:-69524053 None:intergenic
TGGCCACCAAACTTAGTTCC+TGG 0.373919 1.4:-69523273 None:intergenic
ATTGTTCCCTTTAGAAGATT+GGG 0.374956 1.4:-69524052 None:intergenic
GGCAGTGATGCCTTGCAAAA+TGG 0.376149 1.4:-69522069 None:intergenic
ACAAGTCCGCTACAAGGAAT+AGG 0.380041 1.4:+69525027 MS.gene07274:CDS
CATCGTACTGTGGCAGTCAT+TGG 0.380479 1.4:+69524695 MS.gene07274:CDS
ATCTTGTGGGCTGGTTATCC+TGG 0.383202 1.4:+69525348 MS.gene07274:CDS
GCATCAGCAGCAGCTTCTTC+CGG 0.385453 1.4:-69524255 None:intergenic
GCCATTGCGGATATATTGTT+TGG 0.389650 1.4:+69525387 MS.gene07274:CDS
CGTGGTCAATGGCGTCTTGA+TGG 0.393875 1.4:+69524076 MS.gene07274:CDS
ACCAGTCCTATCTACCATTT+CGG 0.395118 1.4:-69525190 None:intergenic
AAGAATGATCCTCGAATTGC+AGG 0.397926 1.4:+69525324 MS.gene07274:CDS
GCGTATTTACCTGCTAGAAT+TGG 0.397933 1.4:-69523598 None:intergenic
CCTTGGTCAGAGGCACTTCA+TGG 0.399118 1.4:+69523234 MS.gene07274:intron
TTCGCAAAAGTTATATCTAT+AGG 0.401053 1.4:-69525303 None:intergenic
CTGTAGTCCTCTCACATAAC+TGG 0.401956 1.4:-69523623 None:intergenic
AGTGACAGTAGCATTAGAAT+TGG 0.406208 1.4:-69524720 None:intergenic
GCTTCCTTGTGGGAAGCAAT+TGG 0.410013 1.4:+69523351 MS.gene07274:CDS
TTCATTCAATGCTTCCTTGT+GGG 0.412773 1.4:+69523341 MS.gene07274:CDS
GTAGTGTATCCATTTGGTTA+TGG 0.416901 1.4:+69526030 MS.gene07274:CDS
TGTGATGTGTTCTTACAATC+AGG 0.419127 1.4:+69524003 MS.gene07274:CDS
TGAGGGAAGCTAGTGGCAGC+TGG 0.425971 1.4:-69523300 None:intergenic
ACCAGACATTAAGACCAAAA+TGG 0.427459 1.4:-69525277 None:intergenic
GCAATGATGATAAGCAATTT+GGG 0.431372 1.4:+69525097 MS.gene07274:CDS
ATGTACAACGGAGGAATGGC+TGG 0.431552 1.4:+69523496 MS.gene07274:CDS
CTCGAATTGCAGGCATCTTG+TGG 0.431728 1.4:+69525334 MS.gene07274:CDS
CCCACGATGGGGTCGTGGAC+AGG 0.434758 1.4:+69523558 MS.gene07274:CDS
GTGGGACCAGGAACTAAGTT+TGG 0.438000 1.4:+69523267 MS.gene07274:CDS
CTGCTGCGGTTCCAAGGGTT+GGG 0.439330 1.4:+69522166 MS.gene07274:CDS
GCAAAATGGTAAGTTCTTTG+TGG 0.441477 1.4:-69522055 None:intergenic
TGATTACAAACCTGGGTTAG+TGG 0.442911 1.4:-69525412 None:intergenic
CAAGTCCGCTACAAGGAATA+GGG 0.444742 1.4:+69525028 MS.gene07274:CDS
AGATGGTACTAACACTTTGT+TGG 0.445284 1.4:+69526230 MS.gene07274:CDS
ATGAGGTCATTCACCCTTGT+TGG 0.447171 1.4:-69522096 None:intergenic
CACCAGCAGGTAATGGTCAA+TGG 0.449857 1.4:+69526265 MS.gene07274:CDS
TATCAGATTGTGATTCTGTT+GGG 0.449866 1.4:+69524199 MS.gene07274:CDS
CTTTGTTTGTGCTATTTCCA+CGG 0.451684 1.4:-69526128 None:intergenic
CAGTTATGTGAGAGGACTAC+AGG 0.452877 1.4:+69523624 MS.gene07274:CDS
AAGGAATAGGGAAATATTCA+AGG 0.455085 1.4:+69525040 MS.gene07274:CDS
GCTGCTGCGGTTCCAAGGGT+TGG 0.456048 1.4:+69522165 MS.gene07274:CDS
AAGGTTGACATTGCAAGAAA+AGG 0.459521 1.4:+69522122 MS.gene07274:CDS
AGCTCATCCACAGGGTACCC+TGG 0.460856 1.4:+69525979 MS.gene07274:CDS
ATCCGCAATGGCAGCACCAC+CGG 0.461366 1.4:-69525376 None:intergenic
AACAGTAGCATCCGCTTGAC+GGG 0.464308 1.4:-69525136 None:intergenic
CACAAGATGCCTGCAATTCG+AGG 0.465089 1.4:-69525333 None:intergenic
TGCTGACCCCAATCTTCTAA+AGG 0.467676 1.4:+69524045 MS.gene07274:CDS
ACCAAAAGTGGTGTCAGTTC+CGG 0.469643 1.4:+69526092 MS.gene07274:CDS
CCTTGTGGGTACCATGTCAT+AGG 0.471143 1.4:-69525913 None:intergenic
ACAGGTTTGGATTTGGATTG+TGG 0.471236 1.4:+69524407 MS.gene07274:intron
TCAGTCAATTGAGGCCGAAA+TGG 0.474480 1.4:+69525176 MS.gene07274:CDS
GAGCCATCTGCTCAACCATA+TGG 0.476202 1.4:+69524551 MS.gene07274:CDS
TTGAGGCCGAAATGGTAGAT+AGG 0.476400 1.4:+69525184 MS.gene07274:CDS
GTGACAGTAGCATTAGAATT+GGG 0.478045 1.4:-69524719 None:intergenic
TTGTGCTATTTCCACGGCGA+TGG 0.478460 1.4:-69526122 None:intergenic
AAACAGTAGCATCCGCTTGA+CGG 0.478524 1.4:-69525137 None:intergenic
AGAGCTAAGTCTTGGTGAGT+TGG 0.479019 1.4:-69524602 None:intergenic
TCGAATTGCAGGCATCTTGT+GGG 0.482216 1.4:+69525335 MS.gene07274:CDS
GCTGCTGATGCCATTAAAGC+AGG 0.484758 1.4:+69524267 MS.gene07274:CDS
ACCAGCAGGTAATGGTCAAT+GGG 0.486567 1.4:+69526266 MS.gene07274:CDS
ATTAGCTAGTGCACCAAAAG+TGG 0.486967 1.4:+69526080 MS.gene07274:CDS
CTTACAGTCCAAATGAGGTT+AGG 0.488722 1.4:+69524515 MS.gene07274:CDS
ACAATGCTGCTGCGGTTCCA+AGG 0.489142 1.4:+69522160 MS.gene07274:CDS
CTTCTAAAGGGAACAATTCG+TGG 0.489838 1.4:+69524058 MS.gene07274:CDS
GGCCCGGTAGTGTATCCATT+TGG 0.492155 1.4:+69526024 MS.gene07274:CDS
GTTGGACCAAGGTTGCCATA+TGG 0.493410 1.4:-69524566 None:intergenic
TTGCCATATGGTTGAGCAGA+TGG 0.494209 1.4:-69524554 None:intergenic
GGACTGGTTTACTTCTTCCT+GGG 0.495062 1.4:+69525205 MS.gene07274:CDS
TAAGATAATCCATAACCAAA+TGG 0.495998 1.4:-69526039 None:intergenic
CTTCATTCAATGCTTCCTTG+TGG 0.497472 1.4:+69523340 MS.gene07274:CDS
ACTCGTTGCTGAGCCTTAGC+AGG 0.500218 1.4:-69526330 None:intergenic
AGGGAACAATTCGTGGTCAA+TGG 0.503217 1.4:+69524065 MS.gene07274:CDS
CCACGGCGATGGCCGTCTAC+CGG 0.506279 1.4:-69526111 None:intergenic
ACTATGATCGGCAACTATGC+TGG 0.508582 1.4:+69524740 MS.gene07274:CDS
GTGGTCAATGGCGTCTTGAT+GGG 0.510313 1.4:+69524077 MS.gene07274:CDS
GTATCAGATTGTGATTCTGT+TGG 0.511438 1.4:+69524198 MS.gene07274:CDS
GGGTACCCTGTGGATGAGCT+TGG 0.513477 1.4:-69525976 None:intergenic
TGCTAGAATTGGATCCTCAC+CGG 0.513683 1.4:-69523587 None:intergenic
ACAAGGTCTTGTTGATGCCC+AGG 0.514789 1.4:-69525222 None:intergenic
GCTGACCCCAATCTTCTAAA+GGG 0.516568 1.4:+69524046 MS.gene07274:CDS
CGAGCCCGGATGTGCGAATG+TGG 0.517296 1.4:+69525071 MS.gene07274:CDS
GTTCCAAGGGTTGGGATCAA+AGG 0.517619 1.4:+69522174 MS.gene07274:CDS
CAGCTTCAAGAGCTAAGTCT+TGG 0.517691 1.4:-69524610 None:intergenic
GACATTAAGACCAAAATGGT+TGG 0.518340 1.4:-69525273 None:intergenic
TAACCAAATGGATACACTAC+CGG 0.520324 1.4:-69526027 None:intergenic
ACATTAAGACCAAAATGGTT+GGG 0.522088 1.4:-69525272 None:intergenic
TGAGTGTGGTTGATAAGTCT+GGG 0.522755 1.4:+69526382 MS.gene07274:CDS
CCGGCGTTGATGTATAATGT+TGG 0.526319 1.4:-69524236 None:intergenic
GCTGGTTATCCTGGTCAAGC+CGG 0.527403 1.4:+69525357 MS.gene07274:CDS
ATTGCAGGCATCTTGTGGGC+TGG 0.528574 1.4:+69525339 MS.gene07274:CDS
TTTCTCCTTCTCTTATTGAG+TGG 0.531540 1.4:+69521991 MS.gene07274:CDS
TAACCTTTGATCCCAACCCT+TGG 0.532115 1.4:-69522177 None:intergenic
CAACGGTGGTGATGACTTGA+GGG 0.533858 1.4:-69523317 None:intergenic
AATGCTACTGTCACTATGAT+CGG 0.536100 1.4:+69524728 MS.gene07274:CDS
GCTCTTGAAGCTGCAAGACA+AGG 0.536337 1.4:+69524620 MS.gene07274:CDS
TCAGTACCACCAGCAGGTAA+TGG 0.536648 1.4:+69526258 MS.gene07274:CDS
AGGTTGCATCAGACGAAGCA+AGG 0.537900 1.4:+69523470 MS.gene07274:intron
ACAAGGGTGAATGACCTCAT+TGG 0.540784 1.4:+69522099 MS.gene07274:CDS
TCGCTTTCACTTTAATGCAA+AGG 0.541204 1.4:+69523729 MS.gene07274:CDS
TCAACAAGACCTTGTTTCAA+AGG 0.542357 1.4:+69525230 MS.gene07274:CDS
ATGAGGTTAGGAATGTTTGA+TGG 0.546650 1.4:+69524527 MS.gene07274:CDS
CATGCCACATTCGCACATCC+GGG 0.549210 1.4:-69525075 None:intergenic
CCTTGTGGGAAGCAATTGGA+CGG 0.549327 1.4:+69523355 MS.gene07274:CDS
GCTCATCCACAGGGTACCCT+GGG 0.549425 1.4:+69525980 MS.gene07274:CDS
CCTTCTCTTATTGAGTGGTG+AGG 0.551148 1.4:+69521996 MS.gene07274:CDS
AGACCTTGTTTCAAAGGTAG+CGG 0.551793 1.4:+69525236 MS.gene07274:CDS
CCTGTCCACGACCCCATCGT+GGG 0.553753 1.4:-69523558 None:intergenic
GAAAGTCTATGTTCCTGCTA+AGG 0.555151 1.4:+69526317 MS.gene07274:CDS
AGGGACCCACGATGGGGTCG+TGG 0.557616 1.4:+69523553 MS.gene07274:CDS
GCTCAACCATATGGCAACCT+TGG 0.559431 1.4:+69524560 MS.gene07274:CDS
AGCTAATGTGTGAACAAAGT+TGG 0.559505 1.4:-69526064 None:intergenic
TGGGTATGTTGTGCAAGGAA+AGG 0.559911 1.4:-69524431 None:intergenic
GCAGCACCACCGGCTTGACC+AGG 0.560968 1.4:-69525366 None:intergenic
GGCGATGTACAACGGAGGAA+TGG 0.561330 1.4:+69523492 MS.gene07274:CDS
AGCCGGTGGTGCTGCCATTG+CGG 0.565149 1.4:+69525374 MS.gene07274:CDS
CTACATGCAGGTTAGCAAGC+AGG 0.567726 1.4:+69523919 MS.gene07274:intron
ATGAGACCAAGCTCATCCAC+AGG 0.567760 1.4:+69525970 MS.gene07274:CDS
AAGGTAGCGGCTGCCTCGAG+AGG 0.568465 1.4:+69525249 MS.gene07274:CDS
TCAAGGACTATTCACGAGCC+CGG 0.568831 1.4:+69525057 MS.gene07274:CDS
GAGGGAAGCTAGTGGCAGCT+GGG 0.568859 1.4:-69523299 None:intergenic
ATCAGATTGTGATTCTGTTG+GGG 0.569005 1.4:+69524200 MS.gene07274:CDS
CAATGCTGCTGCGGTTCCAA+GGG 0.573627 1.4:+69522161 MS.gene07274:CDS
GCCCATTGACCATTACCTGC+TGG 0.576424 1.4:-69526267 None:intergenic
CTTGTGGGAAGCAATTGGAC+GGG 0.577173 1.4:+69523356 MS.gene07274:CDS
ATTGTGCTTCTTAAGAACAC+TGG 0.577447 1.4:+69524644 MS.gene07274:CDS
GCTAGAATTGGATCCTCACC+GGG 0.579336 1.4:-69523586 None:intergenic
GCAGGTTAGCAAGCAGGACA+TGG 0.581137 1.4:+69523925 MS.gene07274:intron
GATTGGGGTCAGCACAAGTA+GGG 0.582749 1.4:-69524036 None:intergenic
TCACTTCAAGAACAAACACT+AGG 0.584597 1.4:+69526465 MS.gene07274:CDS
AGATTGGGGTCAGCACAAGT+AGG 0.584959 1.4:-69524037 None:intergenic
CTTCATGGAGTTTCAAATGT+GGG 0.585312 1.4:+69523249 MS.gene07274:CDS
TGGTTGATAAGTCTGGGACT+AGG 0.585602 1.4:+69526388 MS.gene07274:CDS
GTGGTGTCAGTTCCGGTAGA+CGG 0.586306 1.4:+69526099 MS.gene07274:CDS
AACCAAATGGATACACTACC+GGG 0.587998 1.4:-69526026 None:intergenic
GGTGAGGATCCAATTCTAGC+AGG 0.588795 1.4:+69523589 MS.gene07274:CDS
CTCTTGAAGCTGCAAGACAA+GGG 0.591209 1.4:+69524621 MS.gene07274:CDS
GGGACTAGGAGAATTCCAAT+GGG 0.591595 1.4:+69526402 MS.gene07274:CDS
GCCGAAATGGTAGATAGGAC+TGG 0.592618 1.4:+69525189 MS.gene07274:CDS
TCCTGTCCACGACCCCATCG+TGG 0.592950 1.4:-69523559 None:intergenic
TTGTTCCCTTTAGAAGATTG+GGG 0.593071 1.4:-69524051 None:intergenic
TATTTCCCTATTCCTTGTAG+CGG 0.593771 1.4:-69525033 None:intergenic
GGATACACAAGTCCGCTACA+AGG 0.594295 1.4:+69525021 MS.gene07274:CDS
GGTCGTGGACAGGAGACTCC+CGG 0.595003 1.4:+69523568 MS.gene07274:CDS
GGTTATCCTGGTCAAGCCGG+TGG 0.595636 1.4:+69525360 MS.gene07274:CDS
TTTAGGATGTGTGTGAAGGA+AGG 0.597067 1.4:+69523968 MS.gene07274:CDS
TGGGACTAGGAGAATTCCAA+TGG 0.597147 1.4:+69526401 MS.gene07274:CDS
TTGTTTGGAACCACTAACCC+AGG 0.597240 1.4:+69525402 MS.gene07274:CDS
GGAGAAATACAATGGTGATG+AGG 0.597505 1.4:-69521975 None:intergenic
GGGATTGGATCAGTCAATTG+AGG 0.599415 1.4:+69525167 MS.gene07274:CDS
TATGATCTTGATAATTGGAA+TGG 0.601843 1.4:+69523700 MS.gene07274:CDS
GTGTTCTCAGTACCACCAGC+AGG 0.602373 1.4:+69526252 MS.gene07274:CDS
GGAGTTTCAAATGTGGGACC+AGG 0.604839 1.4:+69523255 MS.gene07274:CDS
GGTTGCATCAGACGAAGCAA+GGG 0.605154 1.4:+69523471 MS.gene07274:intron
TCCAAACAATATATCCGCAA+TGG 0.605705 1.4:-69525388 None:intergenic
CAGCCGCTACCTTTGAAACA+AGG 0.607790 1.4:-69525239 None:intergenic
CCGTCCAATTGCTTCCCACA+AGG 0.609866 1.4:-69523355 None:intergenic
ACACACTTACAGTCCAAATG+AGG 0.611542 1.4:+69524510 MS.gene07274:CDS
GGACCAGGAACTAAGTTTGG+TGG 0.612020 1.4:+69523270 MS.gene07274:CDS
CAAAATGGTTGGGCCTCTCG+AGG 0.619255 1.4:-69525262 None:intergenic
GCAACGGTGGTGATGACTTG+AGG 0.619522 1.4:-69523318 None:intergenic
TACAGGGAACAGACAGTAGT+CGG 0.622154 1.4:+69523641 MS.gene07274:CDS
CATCACTGCCTATACCAACA+AGG 0.622164 1.4:+69522082 MS.gene07274:CDS
CCTCACCACTCAATAAGAGA+AGG 0.624741 1.4:-69521996 None:intergenic
TATAAATGCAGCCCGTCAAG+CGG 0.625002 1.4:+69525125 MS.gene07274:CDS
TGATGATAAGCAATTTGGGT+CGG 0.626009 1.4:+69525101 MS.gene07274:CDS
GTGTGTGAAGGAAGGTAATG+TGG 0.627264 1.4:+69523976 MS.gene07274:CDS
GGAAGCATTGAATGAAGCAA+CGG 0.628505 1.4:-69523334 None:intergenic
CTAAGGCTCAGCAACGAGTG+AGG 0.630458 1.4:+69526334 MS.gene07274:CDS
GGGTGAATGACCTCATTGGA+AGG 0.631580 1.4:+69522103 MS.gene07274:CDS
GTTGGAGTGCACACATCAGT+TGG 0.632858 1.4:-69524584 None:intergenic
GAAGCAAGGGCGATGTACAA+CGG 0.635473 1.4:+69523484 MS.gene07274:CDS
TAAGAGAAGGAGAAATACAA+TGG 0.637514 1.4:-69521983 None:intergenic
ACTTCATGGAGTTTCAAATG+TGG 0.641554 1.4:+69523248 MS.gene07274:CDS
AGTTATGTGAGAGGACTACA+GGG 0.641980 1.4:+69523625 MS.gene07274:CDS
TGTACAACGGAGGAATGGCT+GGG 0.643008 1.4:+69523497 MS.gene07274:CDS
CCGGTAGACGGCCATCGCCG+TGG 0.643199 1.4:+69526111 MS.gene07274:CDS
ATCACTGCCTATACCAACAA+GGG 0.645073 1.4:+69522083 MS.gene07274:CDS
CACTTCAAGAACAAACACTA+GGG 0.646984 1.4:+69526466 MS.gene07274:CDS
GCCATTTAGGATGTGTGTGA+AGG 0.646990 1.4:+69523964 MS.gene07274:CDS
CATTGACCATTACCTGCTGG+TGG 0.655851 1.4:-69526264 None:intergenic
TACGCTGCCAGTTATGTGAG+AGG 0.656249 1.4:+69523616 MS.gene07274:CDS
AGACAGTAGTCGGTTAAAGG+TGG 0.660144 1.4:+69523651 MS.gene07274:CDS
TGCACACATCAGTTGGACCA+AGG 0.660395 1.4:-69524577 None:intergenic
GGTTCTCCCAGGGTACCCTG+TGG 0.661497 1.4:-69525986 None:intergenic
TCTTGATAATTGGAATGGTG+TGG 0.662682 1.4:+69523705 MS.gene07274:CDS
GGCACCACAAAAGCAACTAG+TGG 0.674093 1.4:+69526287 MS.gene07274:CDS
AGCATTGAATGAAGCAACGG+TGG 0.676069 1.4:-69523331 None:intergenic
GGGGTACATAGTATTCACAT+TGG 0.680410 1.4:+69526423 MS.gene07274:CDS
CCTATGACATGGTACCCACA+AGG 0.680692 1.4:+69525913 MS.gene07274:CDS
AAATGGTAAGTTCTTTGTGG+AGG 0.680816 1.4:-69522052 None:intergenic
GCAATGTCAACCTTCCAATG+AGG 0.684875 1.4:-69522113 None:intergenic
GAGCTAAGCTACCTATGACA+TGG 0.685368 1.4:+69525902 MS.gene07274:CDS
AGAGTGACACATGCACGATG+TGG 0.689806 1.4:+69526159 MS.gene07274:CDS
CCAACATTATACATCAACGC+CGG 0.694624 1.4:+69524236 MS.gene07274:CDS
TGGACAGGAGACTCCCGGTG+AGG 0.696359 1.4:+69523573 MS.gene07274:CDS
GTTAGTGAACAATGCTGCTG+CGG 0.699085 1.4:+69522152 MS.gene07274:CDS
TGAGACCAAGCTCATCCACA+GGG 0.704245 1.4:+69525971 MS.gene07274:CDS
GACTAGGAGAATTCCAATGG+GGG 0.732630 1.4:+69526404 MS.gene07274:CDS
GCAAGGGCGATGTACAACGG+AGG 0.742537 1.4:+69523487 MS.gene07274:CDS
GATGACTTGAGGGAAGCTAG+TGG 0.745072 1.4:-69523307 None:intergenic
GGACTAGGAGAATTCCAATG+GGG 0.764226 1.4:+69526403 MS.gene07274:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAATAAATAAAAACAAAAT+TGG + chr1.4:69522642-69522661 MS.gene07274:intron 10.0%
!!! AATTTTTATGAATAAAAAAG+AGG + chr1.4:69522574-69522593 MS.gene07274:intron 10.0%
!! AAATATATCAACCATTAATT+AGG - chr1.4:69524377-69524396 None:intergenic 15.0%
!! AAATCTTACTATATTTACTT+CGG + chr1.4:69524158-69524177 MS.gene07274:intron 15.0%
!! CTTTAAACATGTTATAATTA+TGG - chr1.4:69522411-69522430 None:intergenic 15.0%
!! GGTGTAAAAAATAATAAAAA+TGG + chr1.4:69522615-69522634 MS.gene07274:intron 15.0%
!!! ATTATTTTTTACACCATTTT+TGG - chr1.4:69522610-69522629 None:intergenic 15.0%
!!! CATTTATAATGTAGTTTTTT+AGG - chr1.4:69525642-69525661 None:intergenic 15.0%
!!! TAGTTTTTAAGAAATTGTTT+GGG + chr1.4:69525557-69525576 MS.gene07274:intron 15.0%
!!! TTACTAGTTTTCTTTTTAAA+TGG + chr1.4:69525821-69525840 MS.gene07274:intron 15.0%
!!! TTTTTTCGTTTTTGTTTTTT+AGG + chr1.4:69524988-69525007 MS.gene07274:intron 15.0%
!! ACATATAGTTAAAAAACCAA+GGG + chr1.4:69522722-69522741 MS.gene07274:intron 20.0%
!! CTATATGTAGGAATTAAATT+TGG - chr1.4:69522710-69522729 None:intergenic 20.0%
!! GATTAAAATAGAAGAAATGT+GGG + chr1.4:69523849-69523868 MS.gene07274:intron 20.0%
!! TACATATAGTTAAAAAACCA+AGG + chr1.4:69522721-69522740 MS.gene07274:intron 20.0%
!!! AAAGAGTTTTATATAAAAGG+AGG + chr1.4:69525773-69525792 MS.gene07274:intron 20.0%
!!! AACTAAAATACCATTTTGAT+TGG + chr1.4:69522930-69522949 MS.gene07274:intron 20.0%
!!! AAGAGTTTTATATAAAAGGA+GGG + chr1.4:69525774-69525793 MS.gene07274:intron 20.0%
!!! AGTTTTTAAGAAATTGTTTG+GGG + chr1.4:69525558-69525577 MS.gene07274:intron 20.0%
!!! ATATATTTGATGATTGTTAC+AGG + chr1.4:69524389-69524408 MS.gene07274:intron 20.0%
!!! GTAGTTTTTAAGAAATTGTT+TGG + chr1.4:69525556-69525575 MS.gene07274:intron 20.0%
!!! TAATCAATCTATCCTTTTAA+GGG + chr1.4:69525429-69525448 MS.gene07274:intron 20.0%
!!! TTGGTTTTTTAACTATATGT+AGG - chr1.4:69522722-69522741 None:intergenic 20.0%
! AAAACTAGGAACCTAATTAA+TGG + chr1.4:69524363-69524382 MS.gene07274:intron 25.0%
! AGTGTATACCATAAACATAA+AGG - chr1.4:69523758-69523777 None:intergenic 25.0%
! GGATTAAAATAGAAGAAATG+TGG + chr1.4:69523848-69523867 MS.gene07274:intron 25.0%
! GTGTATACCATAAACATAAA+GGG - chr1.4:69523757-69523776 None:intergenic 25.0%
! TAAGATAATCCATAACCAAA+TGG - chr1.4:69526042-69526061 None:intergenic 25.0%
! TTCGCAAAAGTTATATCTAT+AGG - chr1.4:69525306-69525325 None:intergenic 25.0%
!! CACTTTTGTACTATGTAATA+TGG + chr1.4:69523794-69523813 MS.gene07274:intron 25.0%
!! GTAATCAATCTATCCTTTTA+AGG + chr1.4:69525428-69525447 MS.gene07274:intron 25.0%
!! TATGATCTTGATAATTGGAA+TGG + chr1.4:69523700-69523719 MS.gene07274:CDS 25.0%
!! TATTTACTTCGGTGTAATTT+AGG + chr1.4:69524169-69524188 MS.gene07274:intron 25.0%
!! TCCAAATGTGAACATTTTTA+GGG + chr1.4:69523534-69523553 MS.gene07274:CDS 25.0%
!! TTTTCATTGATCTAACGTAA+GGG + chr1.4:69523436-69523455 MS.gene07274:intron 25.0%
!! TTTTTCATTGATCTAACGTA+AGG + chr1.4:69523435-69523454 MS.gene07274:intron 25.0%
!!! AAAAACATTGGTTCAAAAGA+TGG + chr1.4:69526213-69526232 MS.gene07274:CDS 25.0%
!!! CATTTCTTCTATTTTAATCC+AGG - chr1.4:69523848-69523867 None:intergenic 25.0%
!!! GCGAAAGAGTTTTATATAAA+AGG + chr1.4:69525770-69525789 MS.gene07274:intron 25.0%
!!! GTATTTTAGTTTGTGAGATT+TGG - chr1.4:69522921-69522940 None:intergenic 25.0%
!!! TAATGTTTTTTTCTTGTGTC+CGG - chr1.4:69525508-69525527 None:intergenic 25.0%
!!! TTTTGACTGAATTTTCAAGT+TGG + chr1.4:69523028-69523047 MS.gene07274:intron 25.0%
AAAAACTACGTTCATCAAGA+TGG - chr1.4:69525545-69525564 None:intergenic 30.0%
AAGGAATAGGGAAATATTCA+AGG + chr1.4:69525040-69525059 MS.gene07274:CDS 30.0%
ACAAGGATACCTTAAAAACT+TGG + chr1.4:69525930-69525949 MS.gene07274:CDS 30.0%
ACATTAAGACCAAAATGGTT+GGG - chr1.4:69525275-69525294 None:intergenic 30.0%
ATCATCGTGTGTTCATTTAT+TGG - chr1.4:69524323-69524342 None:intergenic 30.0%
ATTTCTTTCTCAGCGTTAAA+AGG + chr1.4:69523136-69523155 MS.gene07274:intron 30.0%
GACGTTGATGTTAAAAACAT+TGG + chr1.4:69526201-69526220 MS.gene07274:CDS 30.0%
GATAGATTGATTACAAACCT+GGG - chr1.4:69525422-69525441 None:intergenic 30.0%
GCAATGATGATAAGCAATTT+GGG + chr1.4:69525097-69525116 MS.gene07274:CDS 30.0%
TAAGAGAAGGAGAAATACAA+TGG - chr1.4:69521986-69522005 None:intergenic 30.0%
TATCAGATTGTGATTCTGTT+GGG + chr1.4:69524199-69524218 MS.gene07274:CDS 30.0%
TATCTCTCAAAATGCATTCT+AGG + chr1.4:69525616-69525635 MS.gene07274:intron 30.0%
TCCCTAAAAATGTTCACATT+TGG - chr1.4:69523538-69523557 None:intergenic 30.0%
TGCAATGATGATAAGCAATT+TGG + chr1.4:69525096-69525115 MS.gene07274:CDS 30.0%
TGGTATACACTTCTAGATAT+AGG + chr1.4:69523767-69523786 MS.gene07274:intron 30.0%
TGTTCTTACAATCAGGTTAA+TGG + chr1.4:69524010-69524029 MS.gene07274:CDS 30.0%
TTAACCGAAACTGATGTAAA+TGG + chr1.4:69524476-69524495 MS.gene07274:CDS 30.0%
TTCTTCGGCATAAAAAAACT+AGG + chr1.4:69524349-69524368 MS.gene07274:intron 30.0%
TTTCTTTCTCAGCGTTAAAA+GGG + chr1.4:69523137-69523156 MS.gene07274:intron 30.0%
! AAAGAACTTACCATTTTGCA+AGG + chr1.4:69522059-69522078 MS.gene07274:CDS 30.0%
! AATGGTGCTAAATTTCATCA+AGG + chr1.4:69525839-69525858 MS.gene07274:intron 30.0%
! AATTGTTCCCTTTAGAAGAT+TGG - chr1.4:69524056-69524075 None:intergenic 30.0%
! ATTGTTCCCTTTAGAAGATT+GGG - chr1.4:69524055-69524074 None:intergenic 30.0%
! CTGCTTATGATCTTGATAAT+TGG + chr1.4:69523695-69523714 MS.gene07274:CDS 30.0%
! GTCCAAATGTGAACATTTTT+AGG + chr1.4:69523533-69523552 MS.gene07274:CDS 30.0%
! TAAGAAATTGTTTGGGGTAA+AGG + chr1.4:69525564-69525583 MS.gene07274:intron 30.0%
! TTTGATGATTGTTACAGGTT+TGG + chr1.4:69524394-69524413 MS.gene07274:intron 30.0%
! TTTGCTACTGTTCAATTTTC+AGG + chr1.4:69525880-69525899 MS.gene07274:intron 30.0%
!! AAAGGTACCCTTTATGTTTA+TGG + chr1.4:69523747-69523766 MS.gene07274:intron 30.0%
!! AGAACCTATCGTTTTTACAA+TGG + chr1.4:69526003-69526022 MS.gene07274:CDS 30.0%
!! AGTTTTATATAAAAGGAGGG+AGG + chr1.4:69525777-69525796 MS.gene07274:intron 30.0%
!! GAGCGATTTTTAAGAATCAT+AGG - chr1.4:69525467-69525486 None:intergenic 30.0%
!!! AAGTTTTTAAGGTATCCTTG+TGG - chr1.4:69525931-69525950 None:intergenic 30.0%
!!! AGTTTTTAAGGTATCCTTGT+GGG - chr1.4:69525930-69525949 None:intergenic 30.0%
!!! GGTTAACAAGCCTTTTTTAA+CGG - chr1.4:69524462-69524481 None:intergenic 30.0%
!!! GGTTTTAGAAAATTCAACAG+TGG - chr1.4:69522887-69522906 None:intergenic 30.0%
!!! TGTTTTTTAGGTATTGCTTG+TGG + chr1.4:69525000-69525019 MS.gene07274:intron 30.0%
!!! TTTTTTAAAACCTTGGTCAG+AGG + chr1.4:69523224-69523243 MS.gene07274:intron 30.0%
AAATGGTAAGTTCTTTGTGG+AGG - chr1.4:69522055-69522074 None:intergenic 35.0%
AACATCAACGTCAAGTCTAA+TGG - chr1.4:69526193-69526212 None:intergenic 35.0%
AAGGTTGACATTGCAAGAAA+AGG + chr1.4:69522122-69522141 MS.gene07274:CDS 35.0%
AATGCTACTGTCACTATGAT+CGG + chr1.4:69524728-69524747 MS.gene07274:CDS 35.0%
ACAATTCAGACGTGCAAAAT+TGG + chr1.4:69524881-69524900 MS.gene07274:intron 35.0%
ACCAGACATTAAGACCAAAA+TGG - chr1.4:69525280-69525299 None:intergenic 35.0%
ACCCAAAATGCCGTTAAAAA+AGG + chr1.4:69524449-69524468 MS.gene07274:CDS 35.0%
ACTTCATGGAGTTTCAAATG+TGG + chr1.4:69523248-69523267 MS.gene07274:CDS 35.0%
AGATGGTACTAACACTTTGT+TGG + chr1.4:69526230-69526249 MS.gene07274:CDS 35.0%
AGCACCATTTACATCAGTTT+CGG - chr1.4:69524483-69524502 None:intergenic 35.0%
AGCTAATGTGTGAACAAAGT+TGG - chr1.4:69526067-69526086 None:intergenic 35.0%
AGGGAGGTAGTAATAATCTT+TGG + chr1.4:69525793-69525812 MS.gene07274:intron 35.0%
AGTGACAGTAGCATTAGAAT+TGG - chr1.4:69524723-69524742 None:intergenic 35.0%
ATCAGATTGTGATTCTGTTG+GGG + chr1.4:69524200-69524219 MS.gene07274:CDS 35.0%
ATGAGGTTAGGAATGTTTGA+TGG + chr1.4:69524527-69524546 MS.gene07274:CDS 35.0%
ATTGTGCTTCTTAAGAACAC+TGG + chr1.4:69524644-69524663 MS.gene07274:CDS 35.0%
CAAAAATGGCCGTTACAAAT+CGG - chr1.4:69523191-69523210 None:intergenic 35.0%
CAAACATTCCTAACCTCATT+TGG - chr1.4:69524526-69524545 None:intergenic 35.0%
CAATTCAGACGTGCAAAATT+GGG + chr1.4:69524882-69524901 MS.gene07274:intron 35.0%
CACTTCAAGAACAAACACTA+GGG + chr1.4:69526466-69526485 MS.gene07274:CDS 35.0%
CTTCATGGAGTTTCAAATGT+GGG + chr1.4:69523249-69523268 MS.gene07274:CDS 35.0%
GACATTAAGACCAAAATGGT+TGG - chr1.4:69525276-69525295 None:intergenic 35.0%
GATTGTTACAGGTTTGGATT+TGG + chr1.4:69524400-69524419 MS.gene07274:intron 35.0%
GCAAAATGGTAAGTTCTTTG+TGG - chr1.4:69522058-69522077 None:intergenic 35.0%
GCGTGAAAATCCAATCAAAA+TGG - chr1.4:69522943-69522962 None:intergenic 35.0%
GGATAGATTGATTACAAACC+TGG - chr1.4:69525423-69525442 None:intergenic 35.0%
GTAGTGTATCCATTTGGTTA+TGG + chr1.4:69526030-69526049 MS.gene07274:CDS 35.0%
GTATCAGATTGTGATTCTGT+TGG + chr1.4:69524198-69524217 MS.gene07274:CDS 35.0%
GTGACAGTAGCATTAGAATT+GGG - chr1.4:69524722-69524741 None:intergenic 35.0%
TAACCAAATGGATACACTAC+CGG - chr1.4:69526030-69526049 None:intergenic 35.0%
TATTTCCCTATTCCTTGTAG+CGG - chr1.4:69525036-69525055 None:intergenic 35.0%
TCACTTCAAGAACAAACACT+AGG + chr1.4:69526465-69526484 MS.gene07274:CDS 35.0%
TCCAAACAATATATCCGCAA+TGG - chr1.4:69525391-69525410 None:intergenic 35.0%
TCGCTTTCACTTTAATGCAA+AGG + chr1.4:69523729-69523748 MS.gene07274:CDS 35.0%
TGATGATAAGCAATTTGGGT+CGG + chr1.4:69525101-69525120 MS.gene07274:CDS 35.0%
TGTGATGTGTTCTTACAATC+AGG + chr1.4:69524003-69524022 MS.gene07274:CDS 35.0%
TTCATTCAATGCTTCCTTGT+GGG + chr1.4:69523341-69523360 MS.gene07274:CDS 35.0%
TTCTTTCTCAGCGTTAAAAG+GGG + chr1.4:69523138-69523157 MS.gene07274:intron 35.0%
TTTCTCCTTCTCTTATTGAG+TGG + chr1.4:69521991-69522010 MS.gene07274:CDS 35.0%
! AAAAACAAAATTGGCTCAGC+TGG + chr1.4:69522651-69522670 MS.gene07274:intron 35.0%
! AAGGGTGCAGATATGAAAAA+GGG + chr1.4:69522740-69522759 MS.gene07274:intron 35.0%
! AGGCATTAAAGTGCCAAAAA+TGG + chr1.4:69522594-69522613 MS.gene07274:intron 35.0%
! CACGATGATGCATTTTTCTT+CGG + chr1.4:69524334-69524353 MS.gene07274:intron 35.0%
! CTGTCATTGCCAAGTTTTTA+AGG - chr1.4:69525942-69525961 None:intergenic 35.0%
! TCAACAAGACCTTGTTTCAA+AGG + chr1.4:69525230-69525249 MS.gene07274:CDS 35.0%
! TCTTGATAATTGGAATGGTG+TGG + chr1.4:69523705-69523724 MS.gene07274:CDS 35.0%
! TCTTTGTGGAGGTGATTTTT+GGG - chr1.4:69522044-69522063 None:intergenic 35.0%
! TTCTTTGTGGAGGTGATTTT+TGG - chr1.4:69522045-69522064 None:intergenic 35.0%
! TTGTTCCCTTTAGAAGATTG+GGG - chr1.4:69524054-69524073 None:intergenic 35.0%
!! AGAGGCAAGGTTCTAAAAAA+CGG + chr1.4:69522212-69522231 MS.gene07274:intron 35.0%
!! CTTTGTTTGTGCTATTTCCA+CGG - chr1.4:69526131-69526150 None:intergenic 35.0%
!! TGAGATTTGGTGAACATTTG+AGG - chr1.4:69522908-69522927 None:intergenic 35.0%
!! TGTATGTAAGCTTTTGAGTG+TGG + chr1.4:69526368-69526387 MS.gene07274:CDS 35.0%
!!! ACACGTGTTTTGAGAAATGT+TGG + chr1.4:69524946-69524965 MS.gene07274:intron 35.0%
!!! ACCATTTTGGTCTTAATGTC+TGG + chr1.4:69525276-69525295 MS.gene07274:CDS 35.0%
!!! AGCCTTTTTTAACGGCATTT+TGG - chr1.4:69524454-69524473 None:intergenic 35.0%
!!! ATTTGTAACGGCCATTTTTG+CGG + chr1.4:69523191-69523210 MS.gene07274:intron 35.0%
!!! ATTTTGGTCTTAATGTCTGG+TGG + chr1.4:69525279-69525298 MS.gene07274:CDS 35.0%
!!! ATTTTTGGGTCACATGCAAA+AGG - chr1.4:69522030-69522049 None:intergenic 35.0%
!!! CACGTGTTTTGAGAAATGTT+GGG + chr1.4:69524947-69524966 MS.gene07274:intron 35.0%
!!! CGTCACGTTTTTTAAAACCT+TGG + chr1.4:69523217-69523236 MS.gene07274:intron 35.0%
!!! GATGCATGTTTTGATAAACG+TGG - chr1.4:69524848-69524867 None:intergenic 35.0%
!!! GATGCTACTGTTTTAGTGAT+GGG + chr1.4:69525147-69525166 MS.gene07274:CDS 35.0%
!!! GCCTTTTTTAACGGCATTTT+GGG - chr1.4:69524453-69524472 None:intergenic 35.0%
!!! TACTGTTTTAGTGATGGGAT+TGG + chr1.4:69525152-69525171 MS.gene07274:CDS 35.0%
!!! TGTTTTGAGAAATGTTGGGA+GGG + chr1.4:69524951-69524970 MS.gene07274:intron 35.0%
!!! TTTTGGTCTTAATGTCTGGT+GGG + chr1.4:69525280-69525299 MS.gene07274:CDS 35.0%
!!! TTTTTGGGTCACATGCAAAA+GGG - chr1.4:69522029-69522048 None:intergenic 35.0%
!!! TTTTTTTCTTGTGTCCGGAT+GGG - chr1.4:69525503-69525522 None:intergenic 35.0%
AAAAACGATAGGTTCTCCCA+GGG - chr1.4:69525999-69526018 None:intergenic 40.0%
AAAAGGGGCAAAAACGGTAA+CGG + chr1.4:69523153-69523172 MS.gene07274:intron 40.0%
AACAGACAGTAGTCGGTTAA+AGG + chr1.4:69523648-69523667 MS.gene07274:CDS 40.0%
AACCAAATGGATACACTACC+GGG - chr1.4:69526029-69526048 None:intergenic 40.0%
AAGAATGATCCTCGAATTGC+AGG + chr1.4:69525324-69525343 MS.gene07274:CDS 40.0%
ACACACTTACAGTCCAAATG+AGG + chr1.4:69524510-69524529 MS.gene07274:CDS 40.0%
ACAGGTTTGGATTTGGATTG+TGG + chr1.4:69524407-69524426 MS.gene07274:intron 40.0%
ACCAGTCCTATCTACCATTT+CGG - chr1.4:69525193-69525212 None:intergenic 40.0%
ACGTAAGGGTAATAATGTGC+AGG + chr1.4:69523450-69523469 MS.gene07274:intron 40.0%
ACGTGAAGAAAGGAAGAAGA+AGG - chr1.4:69522841-69522860 None:intergenic 40.0%
AGCATATAGGACAAAACTGC+AGG + chr1.4:69522777-69522796 MS.gene07274:intron 40.0%
AGCGTTAAAAGGGGCAAAAA+CGG + chr1.4:69523147-69523166 MS.gene07274:intron 40.0%
AGGGTGCAGATATGAAAAAG+GGG + chr1.4:69522741-69522760 MS.gene07274:intron 40.0%
AGTTATGTGAGAGGACTACA+GGG + chr1.4:69523625-69523644 MS.gene07274:CDS 40.0%
ATATAGGACAAAACTGCAGG+TGG + chr1.4:69522780-69522799 MS.gene07274:intron 40.0%
ATCACTGCCTATACCAACAA+GGG + chr1.4:69522083-69522102 MS.gene07274:CDS 40.0%
ATTAGCTAGTGCACCAAAAG+TGG + chr1.4:69526080-69526099 MS.gene07274:CDS 40.0%
CACGAAAAATCATCGTACTG+TGG + chr1.4:69524685-69524704 MS.gene07274:CDS 40.0%
CATGTGCCTGCATAAAACAA+GGG - chr1.4:69524770-69524789 None:intergenic 40.0%
CCAACATTATACATCAACGC+CGG + chr1.4:69524236-69524255 MS.gene07274:CDS 40.0%
CGAAAAGAAGCTCCCTTAAA+AGG - chr1.4:69525444-69525463 None:intergenic 40.0%
CTTACAGTCCAAATGAGGTT+AGG + chr1.4:69524515-69524534 MS.gene07274:CDS 40.0%
CTTCATTCAATGCTTCCTTG+TGG + chr1.4:69523340-69523359 MS.gene07274:CDS 40.0%
GAAAGTCTATGTTCCTGCTA+AGG + chr1.4:69526317-69526336 MS.gene07274:CDS 40.0%
GATACAAATAACGGTCTTCG+CGG + chr1.4:69522295-69522314 MS.gene07274:intron 40.0%
GCCATTGCGGATATATTGTT+TGG + chr1.4:69525387-69525406 MS.gene07274:CDS 40.0%
GCGTATTTACCTGCTAGAAT+TGG - chr1.4:69523601-69523620 None:intergenic 40.0%
GGGGTACATAGTATTCACAT+TGG + chr1.4:69526423-69526442 MS.gene07274:CDS 40.0%
GTGCATAAGCAACAGCATAT+AGG + chr1.4:69522764-69522783 MS.gene07274:intron 40.0%
GTTGTTCTTCACGTGAAGAA+AGG - chr1.4:69522851-69522870 None:intergenic 40.0%
TAAAAACGATAGGTTCTCCC+AGG - chr1.4:69526000-69526019 None:intergenic 40.0%
TATAGGACAAAACTGCAGGT+GGG + chr1.4:69522781-69522800 MS.gene07274:intron 40.0%
TCATACTCATGTCTACATGC+AGG + chr1.4:69523907-69523926 MS.gene07274:intron 40.0%
TCATTCACCCTTGTTGGTAT+AGG - chr1.4:69522093-69522112 None:intergenic 40.0%
TCCTTCACACACATCCTAAA+TGG - chr1.4:69523968-69523987 None:intergenic 40.0%
TCTTAAAAATCGCTCCAGTC+TGG + chr1.4:69525472-69525491 MS.gene07274:intron 40.0%
TGAACCACTTGATGCATCAA+GGG + chr1.4:69522682-69522701 MS.gene07274:intron 40.0%
TGAATACTATGTACCCCCAT+TGG - chr1.4:69526420-69526439 None:intergenic 40.0%
TTGGGATCAAAGGTTATGAG+TGG + chr1.4:69522184-69522203 MS.gene07274:intron 40.0%
! AGACCTTGTTTCAAAGGTAG+CGG + chr1.4:69525236-69525255 MS.gene07274:CDS 40.0%
! CAAGGGTGCAGATATGAAAA+AGG + chr1.4:69522739-69522758 MS.gene07274:intron 40.0%
! CACAGTACGATGATTTTTCG+TGG - chr1.4:69524687-69524706 None:intergenic 40.0%
! CTCAAAACACGTGTTTTGTC+TGG - chr1.4:69524940-69524959 None:intergenic 40.0%
! CTTCTAAAGGGAACAATTCG+TGG + chr1.4:69524058-69524077 MS.gene07274:CDS 40.0%
! GGAGAAATACAATGGTGATG+AGG - chr1.4:69521978-69521997 None:intergenic 40.0%
! GTGTAACTAGCCTGCTTTAA+TGG - chr1.4:69524280-69524299 None:intergenic 40.0%
! TCCAGGATTACCAAAAGTGT+TGG - chr1.4:69523831-69523850 None:intergenic 40.0%
! TGATTACAAACCTGGGTTAG+TGG - chr1.4:69525415-69525434 None:intergenic 40.0%
! TTTAGGATGTGTGTGAAGGA+AGG + chr1.4:69523968-69523987 MS.gene07274:CDS 40.0%
!! AAGGTTCTAAAAAACGGTCG+CGG + chr1.4:69522218-69522237 MS.gene07274:intron 40.0%
!! ACACGTTCAATGTGCCATTT+AGG + chr1.4:69523951-69523970 MS.gene07274:CDS 40.0%
!! CATTTTGGGTATGTTGTGCA+AGG - chr1.4:69524439-69524458 None:intergenic 40.0%
!! CTATCGTTTTTACAATGGCC+CGG + chr1.4:69526008-69526027 MS.gene07274:CDS 40.0%
!! CTTTTTCATATCTGCACCCT+TGG - chr1.4:69522741-69522760 None:intergenic 40.0%
!! GATTACCAAAAGTGTTGGAC+TGG - chr1.4:69523826-69523845 None:intergenic 40.0%
!! GGAAGCATTGAATGAAGCAA+CGG - chr1.4:69523337-69523356 None:intergenic 40.0%
!! TCCAACACTTTTGGTAATCC+TGG + chr1.4:69523827-69523846 MS.gene07274:intron 40.0%
!! TGAGTGTGGTTGATAAGTCT+GGG + chr1.4:69526382-69526401 MS.gene07274:CDS 40.0%
!! TTGAGTGTGGTTGATAAGTC+TGG + chr1.4:69526381-69526400 MS.gene07274:CDS 40.0%
!! TTGTTTTATGCAGGCACATG+GGG + chr1.4:69524770-69524789 MS.gene07274:intron 40.0%
!! TTTCAAGTTGGAGTCCGTAA+CGG + chr1.4:69523040-69523059 MS.gene07274:intron 40.0%
!!! AAAGCCACTAGTTGCTTTTG+TGG - chr1.4:69526294-69526313 None:intergenic 40.0%
!!! CTTGTTTTATGCAGGCACAT+GGG + chr1.4:69524769-69524788 MS.gene07274:intron 40.0%
!!! GGATGCTACTGTTTTAGTGA+TGG + chr1.4:69525146-69525165 MS.gene07274:CDS 40.0%
!!! GTGTTTTGAGAAATGTTGGG+AGG + chr1.4:69524950-69524969 MS.gene07274:intron 40.0%
!!! GTTTTGAGAAATGTTGGGAG+GGG + chr1.4:69524952-69524971 MS.gene07274:intron 40.0%
!!! GTTTTTTTCTTGTGTCCGGA+TGG - chr1.4:69525504-69525523 None:intergenic 40.0%
AAACAGTAGCATCCGCTTGA+CGG - chr1.4:69525140-69525159 None:intergenic 45.0%
ACAAGGGTGAATGACCTCAT+TGG + chr1.4:69522099-69522118 MS.gene07274:CDS 45.0%
ACAAGTCCGCTACAAGGAAT+AGG + chr1.4:69525027-69525046 MS.gene07274:CDS 45.0%
ACGTGACGTTACCGCAAAAA+TGG - chr1.4:69523205-69523224 None:intergenic 45.0%
ACTATGATCGGCAACTATGC+TGG + chr1.4:69524740-69524759 MS.gene07274:CDS 45.0%
AGACAGTAGTCGGTTAAAGG+TGG + chr1.4:69523651-69523670 MS.gene07274:CDS 45.0%
AGAGCTAAGTCTTGGTGAGT+TGG - chr1.4:69524605-69524624 None:intergenic 45.0%
AGGGAACAATTCGTGGTCAA+TGG + chr1.4:69524065-69524084 MS.gene07274:CDS 45.0%
ATAGGACAAAACTGCAGGTG+GGG + chr1.4:69522782-69522801 MS.gene07274:intron 45.0%
ATATCGCCGTTACAGCGTTA+CGG - chr1.4:69523108-69523127 None:intergenic 45.0%
ATGAGGTCATTCACCCTTGT+TGG - chr1.4:69522099-69522118 None:intergenic 45.0%
CAAGTCCGCTACAAGGAATA+GGG + chr1.4:69525028-69525047 MS.gene07274:CDS 45.0%
CAGCTTCAAGAGCTAAGTCT+TGG - chr1.4:69524613-69524632 None:intergenic 45.0%
CAGTTATGTGAGAGGACTAC+AGG + chr1.4:69523624-69523643 MS.gene07274:CDS 45.0%
CATCACTGCCTATACCAACA+AGG + chr1.4:69522082-69522101 MS.gene07274:CDS 45.0%
CCATGTGCCTGCATAAAACA+AGG - chr1.4:69524771-69524790 None:intergenic 45.0%
CCTCACCACTCAATAAGAGA+AGG - chr1.4:69521999-69522018 None:intergenic 45.0%
CCTTCTCTTATTGAGTGGTG+AGG + chr1.4:69521996-69522015 MS.gene07274:CDS 45.0%
CGGGCCATTGTAAAAACGAT+AGG - chr1.4:69526010-69526029 None:intergenic 45.0%
CGTTAAGGTTGTCGCGATTT+CGG + chr1.4:69522256-69522275 MS.gene07274:intron 45.0%
CTCTTGAAGCTGCAAGACAA+GGG + chr1.4:69524621-69524640 MS.gene07274:CDS 45.0%
CTGAACCACTTGATGCATCA+AGG + chr1.4:69522681-69522700 MS.gene07274:intron 45.0%
CTGTAGTCCTCTCACATAAC+TGG - chr1.4:69523626-69523645 None:intergenic 45.0%
GAACCACTTGATGCATCAAG+GGG + chr1.4:69522683-69522702 MS.gene07274:intron 45.0%
GACTAGGAGAATTCCAATGG+GGG + chr1.4:69526404-69526423 MS.gene07274:CDS 45.0%
GAGCTAAGCTACCTATGACA+TGG + chr1.4:69525902-69525921 MS.gene07274:CDS 45.0%
GCAATGTCAACCTTCCAATG+AGG - chr1.4:69522116-69522135 None:intergenic 45.0%
GCTGACCCCAATCTTCTAAA+GGG + chr1.4:69524046-69524065 MS.gene07274:CDS 45.0%
GGACGCTGCGATACAAATAA+CGG + chr1.4:69522286-69522305 MS.gene07274:intron 45.0%
GGACTAGGAGAATTCCAATG+GGG + chr1.4:69526403-69526422 MS.gene07274:CDS 45.0%
GGATCAAAGGTTATGAGTGG+TGG + chr1.4:69522187-69522206 MS.gene07274:intron 45.0%
GGGACTAGGAGAATTCCAAT+GGG + chr1.4:69526402-69526421 MS.gene07274:CDS 45.0%
GGGATTGGATCAGTCAATTG+AGG + chr1.4:69525167-69525186 MS.gene07274:CDS 45.0%
GGGTGCAGATATGAAAAAGG+GGG + chr1.4:69522742-69522761 MS.gene07274:intron 45.0%
GTGTGTGAAGGAAGGTAATG+TGG + chr1.4:69523976-69523995 MS.gene07274:CDS 45.0%
GTTAGTGAACAATGCTGCTG+CGG + chr1.4:69522152-69522171 MS.gene07274:CDS 45.0%
TAACCTTTGATCCCAACCCT+TGG - chr1.4:69522180-69522199 None:intergenic 45.0%
TACAGGGAACAGACAGTAGT+CGG + chr1.4:69523641-69523660 MS.gene07274:CDS 45.0%
TATAAATGCAGCCCGTCAAG+CGG + chr1.4:69525125-69525144 MS.gene07274:CDS 45.0%
TCAGTCAATTGAGGCCGAAA+TGG + chr1.4:69525176-69525195 MS.gene07274:CDS 45.0%
TCGAATTGCAGGCATCTTGT+GGG + chr1.4:69525335-69525354 MS.gene07274:CDS 45.0%
TGCTAGAATTGGATCCTCAC+CGG - chr1.4:69523590-69523609 None:intergenic 45.0%
TGCTGACCCCAATCTTCTAA+AGG + chr1.4:69524045-69524064 MS.gene07274:CDS 45.0%
TGGCCGTTACAAATCGGTAT+CGG - chr1.4:69523185-69523204 None:intergenic 45.0%
TGGGACTAGGAGAATTCCAA+TGG + chr1.4:69526401-69526420 MS.gene07274:CDS 45.0%
TGGGTATGTTGTGCAAGGAA+AGG - chr1.4:69524434-69524453 None:intergenic 45.0%
TTGAGGCCGAAATGGTAGAT+AGG + chr1.4:69525184-69525203 MS.gene07274:CDS 45.0%
TTGCCATATGGTTGAGCAGA+TGG - chr1.4:69524557-69524576 None:intergenic 45.0%
! ACCAAAAGTGGTGTCAGTTC+CGG + chr1.4:69526092-69526111 MS.gene07274:CDS 45.0%
! ACCAGCAGGTAATGGTCAAT+GGG + chr1.4:69526266-69526285 MS.gene07274:CDS 45.0%
! AGCATTGAATGAAGCAACGG+TGG - chr1.4:69523334-69523353 None:intergenic 45.0%
! CGATGATTTTTCGTGGAGAG+AGG - chr1.4:69524680-69524699 None:intergenic 45.0%
! GCCATTTAGGATGTGTGTGA+AGG + chr1.4:69523964-69523983 MS.gene07274:CDS 45.0%
! TTGTTTGGAACCACTAACCC+AGG + chr1.4:69525402-69525421 MS.gene07274:CDS 45.0%
!! ACATTTTTAGGGACCCACGA+TGG + chr1.4:69523545-69523564 MS.gene07274:CDS 45.0%
!! AGGACTGGTTTACTTCTTCC+TGG + chr1.4:69525204-69525223 MS.gene07274:CDS 45.0%
!! ATTTTTAGGGACCCACGATG+GGG + chr1.4:69523547-69523566 MS.gene07274:CDS 45.0%
!! CATTTTTAGGGACCCACGAT+GGG + chr1.4:69523546-69523565 MS.gene07274:CDS 45.0%
!! CCGGCGTTGATGTATAATGT+TGG - chr1.4:69524239-69524258 None:intergenic 45.0%
!! CTGCCGATACCGATTTGTAA+CGG + chr1.4:69523179-69523198 MS.gene07274:intron 45.0%
!! GGACTGGTTTACTTCTTCCT+GGG + chr1.4:69525205-69525224 MS.gene07274:CDS 45.0%
!! TGGTTGATAAGTCTGGGACT+AGG + chr1.4:69526388-69526407 MS.gene07274:CDS 45.0%
!! TTACAAATCGGTATCGGCAG+CGG - chr1.4:69523179-69523198 None:intergenic 45.0%
!!! CCTTGTTTTATGCAGGCACA+TGG + chr1.4:69524768-69524787 MS.gene07274:intron 45.0%
AACAGTAGCATCCGCTTGAC+GGG - chr1.4:69525139-69525158 None:intergenic 50.0%
AGAGTGACACATGCACGATG+TGG + chr1.4:69526159-69526178 MS.gene07274:CDS 50.0%
AGATTGGGGTCAGCACAAGT+AGG - chr1.4:69524040-69524059 None:intergenic 50.0%
AGGTTATGAGTGGTGGTCAG+AGG + chr1.4:69522194-69522213 MS.gene07274:intron 50.0%
AGGTTGCATCAGACGAAGCA+AGG + chr1.4:69523470-69523489 MS.gene07274:intron 50.0%
ATGAGACCAAGCTCATCCAC+AGG + chr1.4:69525970-69525989 MS.gene07274:CDS 50.0%
ATGTACAACGGAGGAATGGC+TGG + chr1.4:69523496-69523515 MS.gene07274:CDS 50.0%
CACAAGATGCCTGCAATTCG+AGG - chr1.4:69525336-69525355 None:intergenic 50.0%
CATCGTACTGTGGCAGTCAT+TGG + chr1.4:69524695-69524714 MS.gene07274:CDS 50.0%
CATTGACCATTACCTGCTGG+TGG - chr1.4:69526267-69526286 None:intergenic 50.0%
CCTATGACATGGTACCCACA+AGG + chr1.4:69525913-69525932 MS.gene07274:CDS 50.0%
CCTTGTGGGAAGCAATTGGA+CGG + chr1.4:69523355-69523374 MS.gene07274:CDS 50.0%
CCTTGTGGGTACCATGTCAT+AGG - chr1.4:69525916-69525935 None:intergenic 50.0%
CTACATGCAGGTTAGCAAGC+AGG + chr1.4:69523919-69523938 MS.gene07274:intron 50.0%
CTCGAATTGCAGGCATCTTG+TGG + chr1.4:69525334-69525353 MS.gene07274:CDS 50.0%
CTTGTGGGAAGCAATTGGAC+GGG + chr1.4:69523356-69523375 MS.gene07274:CDS 50.0%
GAAGCAAGGGCGATGTACAA+CGG + chr1.4:69523484-69523503 MS.gene07274:CDS 50.0%
GAGCCATCTGCTCAACCATA+TGG + chr1.4:69524551-69524570 MS.gene07274:CDS 50.0%
GATGACTTGAGGGAAGCTAG+TGG - chr1.4:69523310-69523329 None:intergenic 50.0%
GATTGGGGTCAGCACAAGTA+GGG - chr1.4:69524039-69524058 None:intergenic 50.0%
GCCGAAATGGTAGATAGGAC+TGG + chr1.4:69525189-69525208 MS.gene07274:CDS 50.0%
GCTAGAATTGGATCCTCACC+GGG - chr1.4:69523589-69523608 None:intergenic 50.0%
GCTCAACCATATGGCAACCT+TGG + chr1.4:69524560-69524579 MS.gene07274:CDS 50.0%
GCTCTTGAAGCTGCAAGACA+AGG + chr1.4:69524620-69524639 MS.gene07274:CDS 50.0%
GCTGCTGATGCCATTAAAGC+AGG + chr1.4:69524267-69524286 MS.gene07274:CDS 50.0%
GCTTCCTTGTGGGAAGCAAT+TGG + chr1.4:69523351-69523370 MS.gene07274:CDS 50.0%
GGACCAGGAACTAAGTTTGG+TGG + chr1.4:69523270-69523289 MS.gene07274:CDS 50.0%
GGAGTTTCAAATGTGGGACC+AGG + chr1.4:69523255-69523274 MS.gene07274:CDS 50.0%
GGATACACAAGTCCGCTACA+AGG + chr1.4:69525021-69525040 MS.gene07274:CDS 50.0%
GGCACCACAAAAGCAACTAG+TGG + chr1.4:69526287-69526306 MS.gene07274:CDS 50.0%
GGCAGTGATGCCTTGCAAAA+TGG - chr1.4:69522072-69522091 None:intergenic 50.0%
GGGTGAATGACCTCATTGGA+AGG + chr1.4:69522103-69522122 MS.gene07274:CDS 50.0%
GGTGAGGATCCAATTCTAGC+AGG + chr1.4:69523589-69523608 MS.gene07274:CDS 50.0%
GGTTGCATCAGACGAAGCAA+GGG + chr1.4:69523471-69523490 MS.gene07274:intron 50.0%
GTGGGACCAGGAACTAAGTT+TGG + chr1.4:69523267-69523286 MS.gene07274:CDS 50.0%
GTGGTCAATGGCGTCTTGAT+GGG + chr1.4:69524077-69524096 MS.gene07274:CDS 50.0%
GTTCCAAGGGTTGGGATCAA+AGG + chr1.4:69522174-69522193 MS.gene07274:CDS 50.0%
GTTGGACCAAGGTTGCCATA+TGG - chr1.4:69524569-69524588 None:intergenic 50.0%
GTTGGAGTGCACACATCAGT+TGG - chr1.4:69524587-69524606 None:intergenic 50.0%
TACGCTGCCAGTTATGTGAG+AGG + chr1.4:69523616-69523635 MS.gene07274:CDS 50.0%
TCAAGGACTATTCACGAGCC+CGG + chr1.4:69525057-69525076 MS.gene07274:CDS 50.0%
TCAGTACCACCAGCAGGTAA+TGG + chr1.4:69526258-69526277 MS.gene07274:CDS 50.0%
TGAGACCAAGCTCATCCACA+GGG + chr1.4:69525971-69525990 MS.gene07274:CDS 50.0%
TGATCGGCAACTATGCTGGT+AGG + chr1.4:69524744-69524763 MS.gene07274:intron 50.0%
TGCACACATCAGTTGGACCA+AGG - chr1.4:69524580-69524599 None:intergenic 50.0%
TGGCCACCAAACTTAGTTCC+TGG - chr1.4:69523276-69523295 None:intergenic 50.0%
TGTACAACGGAGGAATGGCT+GGG + chr1.4:69523497-69523516 MS.gene07274:CDS 50.0%
TGTCGCGATTTCGGCTGTAA+CGG + chr1.4:69522265-69522284 MS.gene07274:intron 50.0%
! ACCGGAACTGACACCACTTT+TGG - chr1.4:69526096-69526115 None:intergenic 50.0%
! CAACGGTGGTGATGACTTGA+GGG - chr1.4:69523320-69523339 None:intergenic 50.0%
! CACCAGCAGGTAATGGTCAA+TGG + chr1.4:69526265-69526284 MS.gene07274:CDS 50.0%
! CCAGTCCAGTCCAACACTTT+TGG + chr1.4:69523818-69523837 MS.gene07274:intron 50.0%
! GAATGGCTGGGTTGACATAC+TGG + chr1.4:69523509-69523528 MS.gene07274:CDS 50.0%
!! ACAAGGTCTTGTTGATGCCC+AGG - chr1.4:69525225-69525244 None:intergenic 50.0%
!! ATCTTGTGGGCTGGTTATCC+TGG + chr1.4:69525348-69525367 MS.gene07274:CDS 50.0%
!! CAGCCGCTACCTTTGAAACA+AGG - chr1.4:69525242-69525261 None:intergenic 50.0%
!! CCAAAAGTGTTGGACTGGAC+TGG - chr1.4:69523821-69523840 None:intergenic 50.0%
!! TTGTGCTATTTCCACGGCGA+TGG - chr1.4:69526125-69526144 None:intergenic 50.0%
!!! GGTAGGCCCTTGTTTTATGC+AGG + chr1.4:69524761-69524780 MS.gene07274:intron 50.0%
ACAATGCTGCTGCGGTTCCA+AGG + chr1.4:69522160-69522179 MS.gene07274:CDS 55.0%
ACGACCGTGAAACGCCGTTA+CGG - chr1.4:69523076-69523095 None:intergenic 55.0%
ACGGCGTTTCACGGTCGTAA+CGG + chr1.4:69523078-69523097 MS.gene07274:intron 55.0%
ACTCGTTGCTGAGCCTTAGC+AGG - chr1.4:69526333-69526352 None:intergenic 55.0%
AGCTAGTGGCAGCTGGGAAT+TGG - chr1.4:69523296-69523315 None:intergenic 55.0%
ATGAGTGGTGGTCAGAGGCA+AGG + chr1.4:69522199-69522218 MS.gene07274:intron 55.0%
ATTGCAGGCATCTTGTGGGC+TGG + chr1.4:69525339-69525358 MS.gene07274:CDS 55.0%
CAAAATGGTTGGGCCTCTCG+AGG - chr1.4:69525265-69525284 None:intergenic 55.0%
CAATGCTGCTGCGGTTCCAA+GGG + chr1.4:69522161-69522180 MS.gene07274:CDS 55.0%
CATGCCACATTCGCACATCC+GGG - chr1.4:69525078-69525097 None:intergenic 55.0%
CCAGTCTGGATTCACCCATC+CGG + chr1.4:69525486-69525505 MS.gene07274:intron 55.0%
CCGTCCAATTGCTTCCCACA+AGG - chr1.4:69523358-69523377 None:intergenic 55.0%
CCTTCCTTCCTTGTTGACCG+CGG - chr1.4:69522809-69522828 None:intergenic 55.0%
CGGTCAACAAGGAAGGAAGG+AGG + chr1.4:69522809-69522828 MS.gene07274:intron 55.0%
CGTGGTCAATGGCGTCTTGA+TGG + chr1.4:69524076-69524095 MS.gene07274:CDS 55.0%
CTAAGGCTCAGCAACGAGTG+AGG + chr1.4:69526334-69526353 MS.gene07274:CDS 55.0%
CTTCCTTCCTTGTTGACCGC+GGG - chr1.4:69522808-69522827 None:intergenic 55.0%
GCAGGTTAGCAAGCAGGACA+TGG + chr1.4:69523925-69523944 MS.gene07274:intron 55.0%
GCATCAGCAGCAGCTTCTTC+CGG - chr1.4:69524258-69524277 None:intergenic 55.0%
GCATGCCACATTCGCACATC+CGG - chr1.4:69525079-69525098 None:intergenic 55.0%
GCCCATTGACCATTACCTGC+TGG - chr1.4:69526270-69526289 None:intergenic 55.0%
GCTGGTTATCCTGGTCAAGC+CGG + chr1.4:69525357-69525376 MS.gene07274:CDS 55.0%
GGACCCCTTGATGCATCAAG+TGG - chr1.4:69522689-69522708 None:intergenic 55.0%
GGCCCGGTAGTGTATCCATT+TGG + chr1.4:69526024-69526043 MS.gene07274:CDS 55.0%
GGCGATGTACAACGGAGGAA+TGG + chr1.4:69523492-69523511 MS.gene07274:CDS 55.0%
GGCGTTCCGTAACGCTGTAA+CGG + chr1.4:69523099-69523118 MS.gene07274:intron 55.0%
GTGTTCTCAGTACCACCAGC+AGG + chr1.4:69526252-69526271 MS.gene07274:CDS 55.0%
! CCATGAAGTGCCTCTGACCA+AGG - chr1.4:69523237-69523256 None:intergenic 55.0%
! CTCGAGAGGCCCAACCATTT+TGG + chr1.4:69525263-69525282 MS.gene07274:CDS 55.0%
! GCAACGGTGGTGATGACTTG+AGG - chr1.4:69523321-69523340 None:intergenic 55.0%
! GTGGTGTCAGTTCCGGTAGA+CGG + chr1.4:69526099-69526118 MS.gene07274:CDS 55.0%
!! CCTTGGTCAGAGGCACTTCA+TGG + chr1.4:69523234-69523253 MS.gene07274:intron 55.0%
ATCCGCAATGGCAGCACCAC+CGG - chr1.4:69525379-69525398 None:intergenic 60.0%
CCGCGGTCAACAAGGAAGGA+AGG + chr1.4:69522806-69522825 MS.gene07274:intron 60.0%
CCGGATGGGTGAATCCAGAC+TGG - chr1.4:69525489-69525508 None:intergenic 60.0%
CTGCTGCGGTTCCAAGGGTT+GGG + chr1.4:69522166-69522185 MS.gene07274:CDS 60.0%
GAGGGAAGCTAGTGGCAGCT+GGG - chr1.4:69523302-69523321 None:intergenic 60.0%
GAGTCCGTAACGGCGTTTCG+CGG + chr1.4:69523050-69523069 MS.gene07274:intron 60.0%
GCAAGGGCGATGTACAACGG+AGG + chr1.4:69523487-69523506 MS.gene07274:CDS 60.0%
GGGTACCCTGTGGATGAGCT+TGG - chr1.4:69525979-69525998 None:intergenic 60.0%
GGTTATCCTGGTCAAGCCGG+TGG + chr1.4:69525360-69525379 MS.gene07274:CDS 60.0%
TGAGGGAAGCTAGTGGCAGC+TGG - chr1.4:69523303-69523322 None:intergenic 60.0%
! AGCTCATCCACAGGGTACCC+TGG + chr1.4:69525979-69525998 MS.gene07274:CDS 60.0%
! GCTCATCCACAGGGTACCCT+GGG + chr1.4:69525980-69525999 MS.gene07274:CDS 60.0%
AAAACTGCAGGTGGGGCCCG+CGG + chr1.4:69522789-69522808 MS.gene07274:intron 65.0%
ACGGCCGCGAAACGCCGTTA+CGG - chr1.4:69523057-69523076 None:intergenic 65.0%
ACGGCGTTTCGCGGCCGTAA+CGG + chr1.4:69523059-69523078 MS.gene07274:intron 65.0%
CCTGTCCACGACCCCATCGT+GGG - chr1.4:69523561-69523580 None:intergenic 65.0%
CGAGCCCGGATGTGCGAATG+TGG + chr1.4:69525071-69525090 MS.gene07274:CDS 65.0%
GCGGCCGTAACGGCGTTTCA+CGG + chr1.4:69523069-69523088 MS.gene07274:intron 65.0%
GCTGCTGCGGTTCCAAGGGT+TGG + chr1.4:69522165-69522184 MS.gene07274:CDS 65.0%
GGTCGTGGACAGGAGACTCC+CGG + chr1.4:69523568-69523587 MS.gene07274:CDS 65.0%
TCCTGTCCACGACCCCATCG+TGG - chr1.4:69523562-69523581 None:intergenic 65.0%
TCGCGATCGCGGTCGCGTTA+AGG + chr1.4:69522241-69522260 MS.gene07274:intron 65.0%
TGGACAGGAGACTCCCGGTG+AGG + chr1.4:69523573-69523592 MS.gene07274:CDS 65.0%
! AAGGTAGCGGCTGCCTCGAG+AGG + chr1.4:69525249-69525268 MS.gene07274:CDS 65.0%
! GGTTCTCCCAGGGTACCCTG+TGG - chr1.4:69525989-69526008 None:intergenic 65.0%
!! AGCCGGTGGTGCTGCCATTG+CGG + chr1.4:69525374-69525393 MS.gene07274:CDS 65.0%
AACGGTCGCGGTCGCGATCG+CGG + chr1.4:69522230-69522249 MS.gene07274:intron 70.0%
AGGGACCCACGATGGGGTCG+TGG + chr1.4:69523553-69523572 MS.gene07274:CDS 70.0%
CCACGGCGATGGCCGTCTAC+CGG - chr1.4:69526114-69526133 None:intergenic 70.0%
CCCACGATGGGGTCGTGGAC+AGG + chr1.4:69523558-69523577 MS.gene07274:CDS 70.0%
GGGCCCGCGGTCAACAAGGA+AGG + chr1.4:69522802-69522821 MS.gene07274:intron 70.0%
!! GCAGCACCACCGGCTTGACC+AGG - chr1.4:69525369-69525388 None:intergenic 70.0%
CCGGTAGACGGCCATCGCCG+TGG + chr1.4:69526111-69526130 MS.gene07274:CDS 75.0%
GGTGGGGCCCGCGGTCAACA+AGG + chr1.4:69522798-69522817 MS.gene07274:intron 75.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 69521964 69526503 69521964 ID=MS.gene07274
chr1.4 mRNA 69521964 69526503 69521964 ID=MS.gene07274.t1;Parent=MS.gene07274
chr1.4 exon 69521964 69522195 69521964 ID=MS.gene07274.t1.exon1;Parent=MS.gene07274.t1
chr1.4 CDS 69521964 69522195 69521964 ID=cds.MS.gene07274.t1;Parent=MS.gene07274.t1
chr1.4 exon 69523244 69523377 69523244 ID=MS.gene07274.t1.exon2;Parent=MS.gene07274.t1
chr1.4 CDS 69523244 69523377 69523244 ID=cds.MS.gene07274.t1;Parent=MS.gene07274.t1
chr1.4 exon 69523472 69523750 69523472 ID=MS.gene07274.t1.exon3;Parent=MS.gene07274.t1
chr1.4 CDS 69523472 69523750 69523472 ID=cds.MS.gene07274.t1;Parent=MS.gene07274.t1
chr1.4 exon 69523929 69524098 69523929 ID=MS.gene07274.t1.exon4;Parent=MS.gene07274.t1
chr1.4 CDS 69523929 69524098 69523929 ID=cds.MS.gene07274.t1;Parent=MS.gene07274.t1
chr1.4 exon 69524191 69524288 69524191 ID=MS.gene07274.t1.exon5;Parent=MS.gene07274.t1
chr1.4 CDS 69524191 69524288 69524191 ID=cds.MS.gene07274.t1;Parent=MS.gene07274.t1
chr1.4 exon 69524411 69524761 69524411 ID=MS.gene07274.t1.exon6;Parent=MS.gene07274.t1
chr1.4 CDS 69524411 69524761 69524411 ID=cds.MS.gene07274.t1;Parent=MS.gene07274.t1
chr1.4 exon 69525010 69525423 69525010 ID=MS.gene07274.t1.exon7;Parent=MS.gene07274.t1
chr1.4 CDS 69525010 69525423 69525010 ID=cds.MS.gene07274.t1;Parent=MS.gene07274.t1
chr1.4 exon 69525902 69526503 69525902 ID=MS.gene07274.t1.exon8;Parent=MS.gene07274.t1
chr1.4 CDS 69525902 69526503 69525902 ID=cds.MS.gene07274.t1;Parent=MS.gene07274.t1
Gene Sequence

>MS.gene07274

ATGGATTCAATCCTCATCACCATTGTATTTCTCCTTCTCTTATTGAGTGGTGAGGCACGTGACCCTTTTGCATGTGACCCAAAAATCACCTCCACAAAGAACTTACCATTTTGCAAGGCATCACTGCCTATACCAACAAGGGTGAATGACCTCATTGGAAGGTTGACATTGCAAGAAAAGGTTAACATGTTAGTGAACAATGCTGCTGCGGTTCCAAGGGTTGGGATCAAAGGTTATGAGTGGTGGTCAGAGGCAAGGTTCTAAAAAACGGTCGCGGTCGCGATCGCGGTCGCGTTAAGGTTGTCGCGATTTCGGCTGTAACGGACGCTGCGATACAAATAACGGTCTTCGCGGTGTGAATTAGTCAAAATGTTTCACAAAACGTATTAAAACTATTTATGTTATCATATAATGTATAATAACTTAGATTAATACTTTTTTTTTCCATAATTATAACATGTTTAAAGTGAATATAATAATAAAAATAGACTACATTTAGTAAAGATAGAATGTTTGACAGATTGAAAAGAAATTAACTAATAAATTACTACTCATAGCATATCTTTAAACATAGTTCATGATCAATTAACTACATTTAGTTCACATCATAAATTTTTATGAATAAAAAAGAGGCATTAAAGTGCCAAAAATGGTGTAAAAAATAATAAAAATGGTGAAGAAATAAATAAAAACAAAATTGGCTCAGCTGGAATAAATCTGAACCACTTGATGCATCAAGGGGTCCAAATTTAATTCCTACATATAGTTAAAAAACCAAGGGTGCAGATATGAAAAAGGGGGTGCATAAGCAACAGCATATAGGACAAAACTGCAGGTGGGGCCCGCGGTCAACAAGGAAGGAAGGAGGTCAACTCCTTCTTCTTCCTTTCTTCACGTGAAGAACAACAACAAGAACATCACCACTGTTGAATTTTCTAAAACCTCAAATGTTCACCAAATCTCACAAACTAAAATACCATTTTGATTGGATTTTCACGCTGATCATGAATCTAAGCTTATATTTCACAGTGAATGTTTGTATAGAGAGAAAAGTGAGAAAAAAGTTTTGACTGAATTTTCAAGTTGGAGTCCGTAACGGCGTTTCGCGGCCGTAACGGCGTTTCACGGTCGTAACGGCGTTCCGTAACGCTGTAACGGCGATATTGCTGTGAATTTCTTTCTCAGCGTTAAAAGGGGCAAAAACGGTAACGGCCGCTGCCGATACCGATTTGTAACGGCCATTTTTGCGGTAACGTCACGTTTTTTAAAACCTTGGTCAGAGGCACTTCATGGAGTTTCAAATGTGGGACCAGGAACTAAGTTTGGTGGCCAATTCCCAGCTGCCACTAGCTTCCCTCAAGTCATCACCACCGTTGCTTCATTCAATGCTTCCTTGTGGGAAGCAATTGGACGGGTCAGCTATATTTTGTTAATGCAAAACGCTATACTCTTTTTAAAGCAATACTATGATTTTTTCATTGATCTAACGTAAGGGTAATAATGTGCAGGTTGCATCAGACGAAGCAAGGGCGATGTACAACGGAGGAATGGCTGGGTTGACATACTGGAGTCCAAATGTGAACATTTTTAGGGACCCACGATGGGGTCGTGGACAGGAGACTCCCGGTGAGGATCCAATTCTAGCAGGTAAATACGCTGCCAGTTATGTGAGAGGACTACAGGGAACAGACAGTAGTCGGTTAAAGGTGGCTGCTTCATGTAAACACTTTACTGCTTATGATCTTGATAATTGGAATGGTGTGGATCGCTTTCACTTTAATGCAAAGGTACCCTTTATGTTTATGGTATACACTTCTAGATATAGGTTTGCACTTTTGTACTATGTAATATGGTCCAGTCCAGTCCAACACTTTTGGTAATCCTGGATTAAAATAGAAGAAATGTGGGTCATTCTTGTGTTTCTTTTCTAACTTTGAATATACTCATACTCATGTCTACATGCAGGTTAGCAAGCAGGACATGGAAGACACGTTCAATGTGCCATTTAGGATGTGTGTGAAGGAAGGTAATGTGGCTAGTGTGATGTGTTCTTACAATCAGGTTAATGGTGTCCCTACTTGTGCTGACCCCAATCTTCTAAAGGGAACAATTCGTGGTCAATGGCGTCTTGATGGGTAAGCTTAATTACAAATTACAATACAATAGAAGACGTTTATTTTATTTGTTACTTTTAAAATCTTACTATATTTACTTCGGTGTAATTTAGGTACATTGTATCAGATTGTGATTCTGTTGGGGTATTTTACACTAACCAACATTATACATCAACGCCGGAAGAAGCTGCTGCTGATGCCATTAAAGCAGGCTAGTTACACTACATTATTATTATTAGTATCCAATAAATGAACACACGATGATGCATTTTTCTTCGGCATAAAAAAACTAGGAACCTAATTAATGGTTGATATATTTGATGATTGTTACAGGTTTGGATTTGGATTGTGGACCTTTCCTTGCACAACATACCCAAAATGCCGTTAAAAAAGGCTTGTTAACCGAAACTGATGTAAATGGTGCTTTAGCAAACACACTTACAGTCCAAATGAGGTTAGGAATGTTTGATGGTGAGCCATCTGCTCAACCATATGGCAACCTTGGTCCAACTGATGTGTGCACTCCAACTCACCAAGACTTAGCTCTTGAAGCTGCAAGACAAGGGATTGTGCTTCTTAAGAACACTGGTTCATCTTTGCCTCTCTCCACGAAAAATCATCGTACTGTGGCAGTCATTGGACCCAATTCTAATGCTACTGTCACTATGATCGGCAACTATGCTGGTAGGCCCTTGTTTTATGCAGGCACATGGGGCATAATTTCATAATGCAGTACTAAGATTTTTCTGTTTGATAGTTTCTCATTACCACGTTTATCAAAACATGCATCTTGTTCAAATTACACAATTCAGACGTGCAAAATTGGGATGTTTTTTTGCATGTGTCTAGATTGTGTAATCCAGACAAAACACGTGTTTTGAGAAATGTTGGGAGGGGAGAAGAGAAGTCATTTTTTCGTTTTTGTTTTTTAGGTATTGCTTGTGGATACACAAGTCCGCTACAAGGAATAGGGAAATATTCAAGGACTATTCACGAGCCCGGATGTGCGAATGTGGCATGCAATGATGATAAGCAATTTGGGTCGGCTATAAATGCAGCCCGTCAAGCGGATGCTACTGTTTTAGTGATGGGATTGGATCAGTCAATTGAGGCCGAAATGGTAGATAGGACTGGTTTACTTCTTCCTGGGCATCAACAAGACCTTGTTTCAAAGGTAGCGGCTGCCTCGAGAGGCCCAACCATTTTGGTCTTAATGTCTGGTGGGCCTATAGATATAACTTTTGCGAAGAATGATCCTCGAATTGCAGGCATCTTGTGGGCTGGTTATCCTGGTCAAGCCGGTGGTGCTGCCATTGCGGATATATTGTTTGGAACCACTAACCCAGGTTTGTAATCAATCTATCCTTTTAAGGGAGCTTCTTTTCGCCTATGATTCTTAAAAATCGCTCCAGTCTGGATTCACCCATCCGGACACAAGAAAAAAACATTATTTTATGTCTTTATCCATCTTGATGAACGTAGTTTTTAAGAAATTGTTTGGGGTAAAGGTAACACTTTTTTTTAACTTTTTTTCTTCTTATCTCTCAAAATGCATTCTAGGCCTAAAAAACTACATTATAAATGCATATAAACTACATTATGTGAGACTCAGTTTTCAATCACTATCGCTATCTGCAATCATTATTGACGAATATCAAGAAAAATAAGACACATGAGTTTCTTGAAAATTTTGCGAAAGAGTTTTATATAAAAGGAGGGAGGTAGTAATAATCTTTGGTGACTTTACTAGTTTTCTTTTTAAATGGTGCTAAATTTCATCAAGGAAGTGTTTAAAAGTGAGTTTTGCTACTGTTCAATTTTCAGGAGCTAAGCTACCTATGACATGGTACCCACAAGGATACCTTAAAAACTTGGCAATGACAGACATCGCAATGAGACCAAGCTCATCCACAGGGTACCCTGGGAGAACCTATCGTTTTTACAATGGCCCGGTAGTGTATCCATTTGGTTATGGATTATCTTACACCAACTTTGTTCACACATTAGCTAGTGCACCAAAAGTGGTGTCAGTTCCGGTAGACGGCCATCGCCGTGGAAATAGCACAAACAAAGCAGCAATTAGAGTGACACATGCACGATGTGGCAAGCTTTCCATTAGACTTGACGTTGATGTTAAAAACATTGGTTCAAAAGATGGTACTAACACTTTGTTGGTGTTCTCAGTACCACCAGCAGGTAATGGTCAATGGGCACCACAAAAGCAACTAGTGGCTTTTGAGAAAGTCTATGTTCCTGCTAAGGCTCAGCAACGAGTGAGGATCGATATTCATGTATGTAAGCTTTTGAGTGTGGTTGATAAGTCTGGGACTAGGAGAATTCCAATGGGGGTACATAGTATTCACATTGGTGATGTTAAACACTTTGTATCACTTCAAGAACAAACACTAGGGACCATCAAGACTTGA
Protein sequence

>MS.gene07274.t1

MDSILITIVFLLLLLSGEARDPFACDPKITSTKNLPFCKASLPIPTRVNDLIGRLTLQEKVNMLVNNAAAVPRVGIKEALHGVSNVGPGTKFGGQFPAATSFPQVITTVASFNASLWEAIGRVASDEARAMYNGGMAGLTYWSPNVNIFRDPRWGRGQETPGEDPILAGKYAASYVRGLQGTDSSRLKVAASCKHFTAYDLDNWNGVDRFHFNAKVSKQDMEDTFNVPFRMCVKEGNVASVMCSYNQVNGVPTCADPNLLKGTIRGQWRLDGYIVSDCDSVGVFYTNQHYTSTPEEAAADAIKAGLDLDCGPFLAQHTQNAVKKGLLTETDVNGALANTLTVQMRLGMFDGEPSAQPYGNLGPTDVCTPTHQDLALEAARQGIVLLKNTGSSLPLSTKNHRTVAVIGPNSNATVTMIGNYAGIACGYTSPLQGIGKYSRTIHEPGCANVACNDDKQFGSAINAARQADATVLVMGLDQSIEAEMVDRTGLLLPGHQQDLVSKVAAASRGPTILVLMSGGPIDITFAKNDPRIAGILWAGYPGQAGGAAIADILFGTTNPGAKLPMTWYPQGYLKNLAMTDIAMRPSSSTGYPGRTYRFYNGPVVYPFGYGLSYTNFVHTLASAPKVVSVPVDGHRRGNSTNKAAIRVTHARCGKLSIRLDVDVKNIGSKDGTNTLLVFSVPPAGNGQWAPQKQLVAFEKVYVPAKAQQRVRIDIHVCKLLSVVDKSGTRRIPMGVHSIHIGDVKHFVSLQEQTLGTIKT