AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene036268

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene036268.t1 MTR_5g030860 95.034 725 30 3 1 725 1 719 0.0 1423
MS.gene036268.t1 MTR_5g062320 50.616 731 328 13 8 724 4 715 0.0 738
MS.gene036268.t1 MTR_5g062370 50.545 734 326 15 8 724 4 717 0.0 731
MS.gene036268.t1 MTR_5g062430 50.206 729 332 13 8 724 8 717 0.0 730
MS.gene036268.t1 MTR_3g074060 49.932 739 332 10 13 735 7 723 0.0 729
MS.gene036268.t1 MTR_7g109390 50.074 679 310 9 46 720 41 694 0.0 717
MS.gene036268.t1 MTR_1g087240 48.607 718 331 11 9 720 3 688 0.0 713
MS.gene036268.t1 MTR_5g062650 49.931 729 337 13 8 724 8 720 0.0 711
MS.gene036268.t1 MTR_2g034720 48.568 733 340 13 10 736 7 708 0.0 708
MS.gene036268.t1 MTR_1g106860 50.917 709 327 7 18 720 6 699 0.0 704
MS.gene036268.t1 MTR_4g094285 48.329 718 339 10 10 720 15 707 0.0 699
MS.gene036268.t1 MTR_2g008240 49.855 688 319 8 43 727 51 715 0.0 691
MS.gene036268.t1 MTR_5g062370 51.333 600 270 10 8 597 8 595 0.0 609
MS.gene036268.t1 MTR_6g028090 27.622 572 334 27 69 614 95 612 1.93e-31 130
MS.gene036268.t1 MTR_6g028120 26.195 565 351 23 69 614 76 593 7.23e-31 129
MS.gene036268.t1 MTR_6g028100 27.055 584 322 32 69 614 95 612 8.09e-30 125
MS.gene036268.t1 MTR_6g028110 26.435 575 337 31 69 614 96 613 1.13e-29 125
MS.gene036268.t1 MTR_6g028110 26.435 575 337 31 69 614 96 613 1.77e-29 125
MS.gene036268.t1 MTR_7g086030 25.260 578 340 26 69 614 71 588 1.85e-29 124
MS.gene036268.t1 MTR_7g086030 25.260 578 340 26 69 614 96 613 2.92e-29 124
MS.gene036268.t1 MTR_3g079750 25.744 571 342 27 71 614 97 612 1.39e-27 119
MS.gene036268.t1 MTR_3g462820 26.224 572 309 27 68 596 88 589 4.91e-27 117
MS.gene036268.t1 MTR_5g067010 69.444 72 22 0 647 718 2 73 1.21e-26 105
MS.gene036268.t1 MTR_2g030000 26.049 572 343 27 69 614 97 614 2.59e-26 115
MS.gene036268.t1 MTR_5g069800 25.494 557 332 29 68 596 72 573 1.17e-24 109
MS.gene036268.t1 MTR_7g086010 27.225 382 219 17 63 426 100 440 7.41e-22 100
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene036268.t1 AT5G10560 63.265 735 252 6 15 734 7 738 0.0 954
MS.gene036268.t1 AT1G78060 51.926 701 303 11 28 718 19 695 0.0 736
MS.gene036268.t1 AT3G19620 48.623 726 341 10 8 726 1 701 0.0 701
MS.gene036268.t1 AT1G02640 47.796 726 340 10 1 720 1 693 0.0 701
MS.gene036268.t1 AT5G09730 48.682 721 341 10 8 721 9 707 0.0 694
MS.gene036268.t1 AT5G64570 48.675 717 339 10 11 720 23 717 0.0 689
MS.gene036268.t1 AT5G49360 47.743 731 343 15 10 731 14 714 0.0 683
MS.gene036268.t1 AT5G64570 49.404 587 274 8 11 591 23 592 0.0 579
MS.gene036268.t1 AT5G64570 49.913 577 268 8 147 720 1 559 0.0 574
MS.gene036268.t1 AT5G09700 46.099 423 219 5 301 721 45 460 6.63e-126 385
MS.gene036268.t1 AT3G47000 27.604 576 332 29 68 614 76 595 9.38e-35 140
MS.gene036268.t1 AT3G47040 27.289 568 344 26 68 614 76 595 4.08e-31 129
MS.gene036268.t1 AT3G47010 25.217 575 347 26 68 614 77 596 1.53e-30 128
MS.gene036268.t1 AT3G47010 25.043 575 347 27 68 614 77 595 1.69e-28 121
MS.gene036268.t1 AT3G47000 30.481 374 207 17 68 425 76 412 6.03e-28 118
MS.gene036268.t1 AT3G47050 27.306 553 326 27 68 596 76 576 9.85e-28 119
MS.gene036268.t1 AT3G47040 26.138 593 344 27 68 614 76 620 6.32e-27 117
MS.gene036268.t1 AT5G04885 26.863 577 339 30 69 618 114 634 9.26e-26 113
MS.gene036268.t1 AT3G62710 25.174 576 349 25 74 614 112 640 9.41e-26 113
MS.gene036268.t1 AT5G04885 26.863 577 339 30 69 618 97 617 1.03e-25 113
MS.gene036268.t1 AT5G04885 26.863 577 339 30 69 618 97 617 1.03e-25 113
MS.gene036268.t1 AT3G47040 30.435 368 215 16 68 425 76 412 1.32e-25 111
MS.gene036268.t1 AT5G20940 25.913 575 333 27 71 614 101 613 2.06e-24 108
MS.gene036268.t1 AT5G20950 25.124 605 354 25 66 643 90 622 1.87e-23 106
MS.gene036268.t1 AT5G20950 25.124 605 354 25 66 643 90 622 1.87e-23 106
MS.gene036268.t1 AT5G20950 25.413 606 351 26 66 643 168 700 2.22e-23 106
MS.gene036268.t1 AT3G47010 28.084 381 207 16 68 425 77 413 3.16e-23 103
MS.gene036268.t1 AT3G47000 26.014 419 259 21 218 614 29 418 1.27e-22 102
MS.gene036268.t1 AT3G47010 24.029 412 275 19 218 614 29 417 1.80e-20 95.5
MS.gene036268.t1 AT3G47040 25.359 418 263 18 218 614 239 628 3.16e-20 95.9

Find 188 sgRNAs with CRISPR-Local

Find 373 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGGGGTGGTGAAGAATTT+AGG 0.153390 5.2:-20608144 None:intergenic
CGTTCTCTTTGGTTTCTTAT+TGG 0.193378 5.2:+20608462 MS.gene036268:CDS
AAAAGGCAAGTTTGGCAAAT+TGG 0.210658 5.2:+20611026 MS.gene036268:CDS
AACTAATCACAAGTATTCTT+TGG 0.231688 5.2:+20611880 MS.gene036268:CDS
TTGTGCTAGCAAGGATCTTT+TGG 0.243022 5.2:+20610512 MS.gene036268:CDS
GAATTAGGTGGCAGTTATTC+AGG 0.256975 5.2:+20611204 MS.gene036268:CDS
CCAGTTATTCTAGTTCTTAC+TGG 0.258479 5.2:+20611819 MS.gene036268:CDS
TATACTGGAAGTAGAGTATA+TGG 0.259318 5.2:+20612168 MS.gene036268:CDS
CGGCATTTAACCGTTCTCTT+TGG 0.276482 5.2:+20608451 MS.gene036268:CDS
AGTCCATCATATAAGCTTCT+TGG 0.280029 5.2:-20611567 None:intergenic
TGCTTATGATTTGGAGAAAT+GGG 0.286679 5.2:+20608752 MS.gene036268:CDS
TGTTCTTACAATGAAGTTAA+TGG 0.297890 5.2:+20610480 MS.gene036268:CDS
GGTAGGAGGGAGAAGGGGTT+GGG 0.311262 5.2:-20608161 None:intergenic
AAGACGATATCCTACGCTTT+TGG 0.325577 5.2:+20611603 MS.gene036268:CDS
CTGCTTATGATTTGGAGAAA+TGG 0.328518 5.2:+20608751 MS.gene036268:CDS
ATGGCAACTACGAGTGAATT+AGG 0.330374 5.2:+20611189 MS.gene036268:CDS
GCACTAGCTGAAATCATCTT+TGG 0.332465 5.2:+20611933 MS.gene036268:CDS
GTGGGGTACCCTGGTGAAGC+TGG 0.353051 5.2:+20611903 MS.gene036268:CDS
ATGTTTAATGTTGGACAAGC+TGG 0.356387 5.2:+20608513 MS.gene036268:CDS
AGAGAGAGATGTTGCAGAAT+GGG 0.360263 5.2:-20608209 None:intergenic
TTGCAGATGAACAAGGAAAA+AGG 0.361423 5.2:+20612568 MS.gene036268:CDS
TTGGGGTGGTGAAGAATTTA+GGG 0.362271 5.2:-20608143 None:intergenic
CCAGTAAGAACTAGAATAAC+TGG 0.363617 5.2:-20611819 None:intergenic
AAAGGCAAGTTTGGCAAATT+GGG 0.364940 5.2:+20611027 MS.gene036268:CDS
GTAGGTTACACAACAGGATT+TGG 0.386373 5.2:+20610395 MS.gene036268:intron
TGGTGATGTTGTTCTCTAAA+TGG 0.396382 5.2:+20612427 MS.gene036268:CDS
ACTAATCACAAGTATTCTTT+GGG 0.398935 5.2:+20611881 MS.gene036268:CDS
GGAAGTAGAGTATATGGATT+CGG 0.401250 5.2:+20612174 MS.gene036268:CDS
CTTCACCAGTCCTTGTTCAA+TGG 0.406189 5.2:-20610926 None:intergenic
TCGCATTCCCATGTCGTTCA+TGG 0.408950 5.2:-20612103 None:intergenic
TGATGATGATGATGGTCTTA+TGG 0.413199 5.2:+20608704 MS.gene036268:CDS
GTAGGAGGGAGAAGGGGTTG+GGG 0.413679 5.2:-20608160 None:intergenic
TGTGAGTGTGGTGGTTTGCA+TGG 0.414333 5.2:-20608183 None:intergenic
TGGTGGTTTGCATGGGTAGG+AGG 0.416917 5.2:-20608175 None:intergenic
CTTTGCGATGTCAATAGCTT+CGG 0.417359 5.2:-20611664 None:intergenic
ATGCGCCTTGGACTGTTTAA+CGG 0.422424 5.2:+20610994 MS.gene036268:CDS
GGTGTCTCCTTAGCTATCAT+TGG 0.423153 5.2:+20611162 MS.gene036268:CDS
GTAGACAAACTAAGTTTACT+TGG 0.424795 5.2:-20612243 None:intergenic
GGAGGGAGAAGGGGTTGGGG+TGG 0.425539 5.2:-20608157 None:intergenic
TTTCTTATTGGTTATGCTGT+TGG 0.428648 5.2:+20608474 MS.gene036268:CDS
GAAGTAGAGTATATGGATTC+GGG 0.429609 5.2:+20612175 MS.gene036268:CDS
GGTTATGCTGTTGGTGTTGA+AGG 0.430380 5.2:+20608483 MS.gene036268:CDS
TTCTCTGTTCAAATGCGCCT+TGG 0.433593 5.2:+20610982 MS.gene036268:CDS
ATGAACGTTGGAGATTTAGA+TGG 0.439651 5.2:+20612396 MS.gene036268:CDS
GTTCCTTCCCTTGGATAAGA+AGG 0.440509 5.2:+20611137 MS.gene036268:CDS
AAGATGCGTTGTTGGAGAAT+TGG 0.440584 5.2:-20608290 None:intergenic
TATGCTGTTGAGTTTGTTAG+AGG 0.440605 5.2:+20608633 MS.gene036268:CDS
GATGAGAGAGGTTGTTCTTG+TGG 0.440619 5.2:-20608238 None:intergenic
GGTGGTTTGCATGGGTAGGA+GGG 0.443207 5.2:-20608174 None:intergenic
AACTCCTGGGGAGGATCCTA+TGG 0.443273 5.2:+20608599 MS.gene036268:CDS
AGCACTTGAAGCTGCAAGAC+AGG 0.445314 5.2:+20611086 MS.gene036268:CDS
AGAGGGATTCAAGGTGTTGA+GGG 0.447105 5.2:+20608651 MS.gene036268:CDS
GTTACAGTGATTTCTCATAC+AGG 0.448038 5.2:+20612208 MS.gene036268:CDS
GGGTAGGAGGGAGAAGGGGT+TGG 0.453387 5.2:-20608162 None:intergenic
AGAAACAAGTGGGGATTTGA+AGG 0.453827 5.2:+20610543 MS.gene036268:CDS
ATTCTTTGGGTGGGGTACCC+TGG 0.455534 5.2:+20611894 MS.gene036268:CDS
GGAGATGGAAGATGCGTTGT+TGG 0.457611 5.2:-20608298 None:intergenic
TTAGGTATGGATATTAATTG+TGG 0.457882 5.2:+20610874 MS.gene036268:intron
GAGTTTGTTAGAGGGATTCA+AGG 0.458297 5.2:+20608642 MS.gene036268:CDS
TGCATGGGTAGGAGGGAGAA+GGG 0.458580 5.2:-20608167 None:intergenic
ATCTTTGGAGAGTTCAATCC+AGG 0.462275 5.2:+20611948 MS.gene036268:CDS
ATGCTGTTGGTGTTGAAGGT+AGG 0.463660 5.2:+20608487 MS.gene036268:CDS
CGACAATAAGTTCCTTCCCT+TGG 0.465825 5.2:+20611128 MS.gene036268:CDS
GGCGCATTTGAACAGAGAAC+AGG 0.470051 5.2:-20610978 None:intergenic
TCAGACCACCATTGGTAAGA+TGG 0.470160 5.2:-20608333 None:intergenic
GGTCCTGGTGTCAACTTCAA+TGG 0.470190 5.2:+20608381 MS.gene036268:CDS
GCTTCTTCTCAAACCACCAT+TGG 0.470519 5.2:-20612271 None:intergenic
AGAGGTTGTTCTTGTGGAGA+TGG 0.473700 5.2:-20608232 None:intergenic
GAGAGAGAGATGTTGCAGAA+TGG 0.480814 5.2:-20608210 None:intergenic
CTGGAAGGCTTCCGATGACT+TGG 0.486815 5.2:+20612055 MS.gene036268:CDS
TTGCATGGGTAGGAGGGAGA+AGG 0.489086 5.2:-20608168 None:intergenic
GAAGTTGACACCAGGACCAT+TGG 0.490541 5.2:-20608376 None:intergenic
TGCTGTTGGTGTTGAAGGTA+GGG 0.491642 5.2:+20608488 MS.gene036268:CDS
AATTCACTCGTAGTTGCCAT+TGG 0.492114 5.2:-20611186 None:intergenic
ATCACAAGTATTCTTTGGGT+GGG 0.494073 5.2:+20611885 MS.gene036268:CDS
CGCATTCCCATGTCGTTCAT+GGG 0.503462 5.2:-20612102 None:intergenic
ATTCTAGTTCTTACTGGTGG+AGG 0.503864 5.2:+20611825 MS.gene036268:CDS
GGTAGGGCTATGTTTAATGT+TGG 0.504446 5.2:+20608504 MS.gene036268:CDS
CACAACCACGAAACGGTGGC+TGG 0.507198 5.2:-20610428 None:intergenic
TGATGATGGTGAATCTTTGT+TGG 0.511693 5.2:-20608086 None:intergenic
TTTCAGCGAAGGAGACATCA+AGG 0.513259 5.2:-20611851 None:intergenic
GGGAGAGGACAGGAAACTCC+TGG 0.515936 5.2:+20608585 MS.gene036268:CDS
TAGAGGGATTCAAGGTGTTG+AGG 0.519121 5.2:+20608650 MS.gene036268:CDS
GTGAGTGTGGTGGTTTGCAT+GGG 0.519408 5.2:-20608182 None:intergenic
ACTTACCAGCCACCGTTTCG+TGG 0.519836 5.2:+20610423 MS.gene036268:CDS
CTCAAGTGTGGTATCTAGCC+CGG 0.520728 5.2:-20611712 None:intergenic
GGAGAGGACAGGAAACTCCT+GGG 0.520867 5.2:+20608586 MS.gene036268:CDS
GATCCTTCACGTGGTTATCC+CGG 0.520976 5.2:+20612129 MS.gene036268:CDS
TGGGATGCCAAGGTGGGAGA+TGG 0.521244 5.2:-20608313 None:intergenic
GTTGCTGATGTTCTTAAAGC+AGG 0.521708 5.2:+20610748 MS.gene036268:CDS
CAGCAGCAACACGCGATACA+AGG 0.527114 5.2:-20611785 None:intergenic
CAGACCACCATTGGTAAGAT+GGG 0.527606 5.2:-20608332 None:intergenic
GTGTGGTGGTTTGCATGGGT+AGG 0.529659 5.2:-20608178 None:intergenic
GGGTACCCTGGTGAAGCTGG+TGG 0.535576 5.2:+20611906 MS.gene036268:CDS
GACCATTGGTTGCAATGCCA+TGG 0.537198 5.2:-20608362 None:intergenic
CAGAATGGGTAGTGTGAGTG+TGG 0.539105 5.2:-20608195 None:intergenic
ATCTGCCATTGAACAAGGAC+TGG 0.539142 5.2:+20610921 MS.gene036268:CDS
TGTTCCTGCTTGTGCTAGCA+AGG 0.540000 5.2:+20610503 MS.gene036268:CDS
GTTATTCTAGTTCTTACTGG+TGG 0.540292 5.2:+20611822 MS.gene036268:CDS
ATTGAACAAGGTAGAGAAAG+AGG 0.540999 5.2:+20612296 MS.gene036268:CDS
GGCATTGCAACCAATGGTCC+TGG 0.541232 5.2:+20608366 MS.gene036268:CDS
GACACCATCCTTCTTATCCA+AGG 0.542842 5.2:-20611145 None:intergenic
CTTAGCTATCATTGGTCCAA+TGG 0.543498 5.2:+20611170 MS.gene036268:CDS
TCACAAGTATTCTTTGGGTG+GGG 0.544928 5.2:+20611886 MS.gene036268:CDS
GCACTTGAAGCTGCAAGACA+GGG 0.546519 5.2:+20611087 MS.gene036268:CDS
CGGCGGAGACAATAACTTGA+GGG 0.547584 5.2:-20608428 None:intergenic
CTCCATGGCATTGCAACCAA+TGG 0.547753 5.2:+20608360 MS.gene036268:CDS
CATGTCGTTCATGGGAACAT+TGG 0.548046 5.2:-20612094 None:intergenic
CCTGGGGAGGATCCTATGGT+TGG 0.549403 5.2:+20608603 MS.gene036268:CDS
AATCACAAGTATTCTTTGGG+TGG 0.549993 5.2:+20611884 MS.gene036268:CDS
CAATGTTCCCATGAACGACA+TGG 0.550186 5.2:+20612095 MS.gene036268:CDS
GGAGAGCTTCAGACCACCAT+TGG 0.550580 5.2:-20608341 None:intergenic
ACAAGGTCCATCTGTTTACC+AGG 0.555020 5.2:-20611768 None:intergenic
AGAAATGGGGAGAGTTCTCT+AGG 0.555342 5.2:+20608766 MS.gene036268:CDS
ATGCTGTTGAGTTTGTTAGA+GGG 0.560660 5.2:+20608634 MS.gene036268:CDS
GCATCCCATCTTACCAATGG+TGG 0.561057 5.2:+20608328 MS.gene036268:CDS
CATATTTCTGTGATGAACGT+TGG 0.563427 5.2:+20612384 MS.gene036268:CDS
CTTCCCTTGGATAAGAAGGA+TGG 0.564166 5.2:+20611141 MS.gene036268:CDS
TAGGTATAATTTCAATGCTG+TGG 0.566313 5.2:+20608785 MS.gene036268:CDS
TGTTGAACACAACCACGAAA+CGG 0.566356 5.2:-20610435 None:intergenic
GATCTCCGTTAAACAGTCCA+AGG 0.566435 5.2:-20610999 None:intergenic
GAGAGGACAGGAAACTCCTG+GGG 0.569079 5.2:+20608587 MS.gene036268:CDS
AGAGTATATGGATTCGGGCA+TGG 0.569579 5.2:+20612180 MS.gene036268:CDS
GGGACTGGTTAGAAACAAGT+GGG 0.569777 5.2:+20610533 MS.gene036268:CDS
TGGGACTGGTTAGAAACAAG+TGG 0.570057 5.2:+20610532 MS.gene036268:CDS
TCCGGTGTGCAAACATCTTG+AGG 0.570428 5.2:-20611051 None:intergenic
GGGAACATTGGTAAATGACT+CGG 0.571444 5.2:-20612082 None:intergenic
AGATCCTTGCTAGCACAAGC+AGG 0.573562 5.2:-20610507 None:intergenic
ACTGAATCTGCCATTGAACA+AGG 0.576392 5.2:+20610916 MS.gene036268:CDS
TGTTTAATGTTGGACAAGCT+GGG 0.579164 5.2:+20608514 MS.gene036268:CDS
TCTTTGTTGGTGAAACATCA+TGG 0.579528 5.2:-20608073 None:intergenic
TTTCGTGGTTGTGTTCAACA+AGG 0.579630 5.2:+20610438 MS.gene036268:CDS
GACTCGGGATACCAAGTCAT+CGG 0.583344 5.2:-20612066 None:intergenic
GCATGGGTAGGAGGGAGAAG+GGG 0.586389 5.2:-20608166 None:intergenic
GGAACATTGGTAAATGACTC+GGG 0.588973 5.2:-20612081 None:intergenic
TCTCCAAGAAGCTTATATGA+TGG 0.589597 5.2:+20611564 MS.gene036268:CDS
CATTGGACCAATGATAGCTA+AGG 0.589961 5.2:-20611169 None:intergenic
GGTTAGGAGAGAGATGAGAG+AGG 0.592728 5.2:-20608250 None:intergenic
AGTTTGTCTACAACAACCAA+TGG 0.594296 5.2:+20612255 MS.gene036268:CDS
TTCGTGGTTGTGTTCAACAA+GGG 0.596970 5.2:+20610439 MS.gene036268:CDS
GCATCTTCCATCTCCCACCT+TGG 0.598133 5.2:+20608306 MS.gene036268:CDS
TTCAGCTTTGCAGATGAACA+AGG 0.600883 5.2:+20612561 MS.gene036268:intron
AATGGGTAGTGTGAGTGTGG+TGG 0.601116 5.2:-20608192 None:intergenic
TTACAGTGATTTCTCATACA+GGG 0.601546 5.2:+20612209 MS.gene036268:CDS
CATTGAACAAGGACTGGTGA+AGG 0.602615 5.2:+20610927 MS.gene036268:CDS
TGGTGGTCTGAAGCTCTCCA+TGG 0.603445 5.2:+20608345 MS.gene036268:CDS
TGAACAAGGACTGGTGAAGG+AGG 0.606135 5.2:+20610930 MS.gene036268:CDS
TTGTCTACAACAACCAATGG+TGG 0.608237 5.2:+20612258 MS.gene036268:CDS
GAAACAAGTGGGGATTTGAA+GGG 0.608542 5.2:+20610544 MS.gene036268:CDS
GAACAAGAAGAAGATGATGA+TGG 0.612992 5.2:-20608100 None:intergenic
TTCAGCGAAGGAGACATCAA+GGG 0.613720 5.2:-20611850 None:intergenic
GGTAAGATGGGATGCCAAGG+TGG 0.614054 5.2:-20608320 None:intergenic
TTGGCATCCCATCTTACCAA+TGG 0.616463 5.2:+20608325 MS.gene036268:CDS
AATGTTCCCATGAACGACAT+GGG 0.623562 5.2:+20612096 MS.gene036268:CDS
TGCCTCAGACTGTGATGCCG+TGG 0.624596 5.2:+20610678 MS.gene036268:CDS
ACACCATCCTTCTTATCCAA+GGG 0.626527 5.2:-20611144 None:intergenic
GCTTATGATTTGGAGAAATG+GGG 0.631102 5.2:+20608753 MS.gene036268:CDS
GGGTGGTGAAGAATTTAGGG+AGG 0.631127 5.2:-20608140 None:intergenic
ATTGGTAAGATGGGATGCCA+AGG 0.633941 5.2:-20608323 None:intergenic
AGATACCACACTTGAGACAG+AGG 0.637135 5.2:+20611719 MS.gene036268:CDS
CTTCACGTGGTTATCCCGGA+AGG 0.639197 5.2:+20612133 MS.gene036268:CDS
CAATAAGAAACCAAAGAGAA+CGG 0.640234 5.2:-20608461 None:intergenic
CACTTGAAGCTGCAAGACAG+GGG 0.640818 5.2:+20611088 MS.gene036268:CDS
GCATAAGCAGAACCAACCAT+AGG 0.641006 5.2:-20608615 None:intergenic
AGCCACGGCATCACAGTCTG+AGG 0.641121 5.2:-20610680 None:intergenic
AAGATCCTCTGTCTCAAGTG+TGG 0.641328 5.2:-20611724 None:intergenic
ACCTCAAGATGTTTGCACAC+CGG 0.641813 5.2:+20611050 MS.gene036268:CDS
CATGATAGTGATGATGATGA+TGG 0.643345 5.2:+20608696 MS.gene036268:CDS
CATCCTTCTTATCCAAGGGA+AGG 0.643414 5.2:-20611140 None:intergenic
GTAAGATGGGATGCCAAGGT+GGG 0.645774 5.2:-20608319 None:intergenic
GCGGCGGAGACAATAACTTG+AGG 0.649420 5.2:-20608429 None:intergenic
GAGAAGAAGCTTATTGAACA+AGG 0.654692 5.2:+20612284 MS.gene036268:CDS
AAGAGAACGGTTAAATGCCG+CGG 0.659391 5.2:-20608448 None:intergenic
CTTCCGGGATAACCACGTGA+AGG 0.662517 5.2:-20612132 None:intergenic
TCAGCGAAGGAGACATCAAG+GGG 0.662692 5.2:-20611849 None:intergenic
AGGACAGGAAACTCCTGGGG+AGG 0.676521 5.2:+20608590 MS.gene036268:CDS
CCAACCATAGGATCCTCCCC+AGG 0.676971 5.2:-20608603 None:intergenic
GATCCATTGAAGTTGACACC+AGG 0.677018 5.2:-20608384 None:intergenic
GTAAAATGTGACTCTGATGA+CGG 0.677311 5.2:+20611636 MS.gene036268:CDS
ATACTCGTAAACAGTAGCCA+CGG 0.681138 5.2:-20610695 None:intergenic
TGAACACAACCACGAAACGG+TGG 0.689577 5.2:-20610432 None:intergenic
ATCACGGCAACCAAAAGCGT+AGG 0.692115 5.2:-20611613 None:intergenic
GGACTGGTTAGAAACAAGTG+GGG 0.700358 5.2:+20610534 MS.gene036268:CDS
AGATTTAGATGGAAGTCACG+TGG 0.702607 5.2:+20612407 MS.gene036268:CDS
ATGCGAGCTGATCCTTCACG+TGG 0.711213 5.2:+20612120 MS.gene036268:CDS
TCAAGTTATTGTCTCCGCCG+CGG 0.711677 5.2:+20608431 MS.gene036268:CDS
GCAACTACGAGTGAATTAGG+TGG 0.722972 5.2:+20611192 MS.gene036268:CDS
AGAACGGTTAAATGCCGCGG+CGG 0.733295 5.2:-20608445 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTCATCAATTAAATTTT+AGG + chr5.2:20610856-20610875 MS.gene036268:intron 10.0%
!! ATTATTACTATGTTTGAATA+TGG + chr5.2:20610351-20610370 MS.gene036268:intron 15.0%
!!! TTTTTACTGATTATTAGAAT+TGG + chr5.2:20610627-20610646 MS.gene036268:intron 15.0%
!! AATAAGCTAAAAACAACATA+TGG + chr5.2:20609985-20610004 MS.gene036268:intron 20.0%
!! AATCAGTAAAAATAAAGCTT+TGG - chr5.2:20610619-20610638 None:intergenic 20.0%
!! AATGTTTCCTATCTAATAAT+AGG + chr5.2:20611531-20611550 MS.gene036268:intron 20.0%
!! AGAAATTCCTATTATTAGAT+AGG - chr5.2:20611541-20611560 None:intergenic 20.0%
!! ATCCAATTCATATAAAATCT+TGG - chr5.2:20610820-20610839 None:intergenic 20.0%
!! ATTGATGAATTAAAATACCT+TGG - chr5.2:20610848-20610867 None:intergenic 20.0%
!! ATTGCATTCAATACTAAATT+AGG + chr5.2:20609830-20609849 MS.gene036268:intron 20.0%
!! GGAAACATTAATAATCTTAA+TGG - chr5.2:20611520-20611539 None:intergenic 20.0%
!! TCTTAAATTTCCATATCATT+TGG + chr5.2:20611494-20611513 MS.gene036268:intron 20.0%
!!! AAGATTTTATATGAATTGGA+TGG + chr5.2:20610819-20610838 MS.gene036268:intron 20.0%
!!! ATAAGTATGAGTTTTGTTTT+TGG + chr5.2:20610210-20610229 MS.gene036268:intron 20.0%
!!! CATCAATTAAATTTTAGGTA+TGG + chr5.2:20610861-20610880 MS.gene036268:intron 20.0%
!!! GGTATTTTTTTTCTTCATAT+TGG + chr5.2:20611225-20611244 MS.gene036268:intron 20.0%
!!! TAAGTATGAGTTTTGTTTTT+GGG + chr5.2:20610211-20610230 MS.gene036268:intron 20.0%
!!! TTCCAAGATTTTATATGAAT+TGG + chr5.2:20610815-20610834 MS.gene036268:intron 20.0%
!!! TTTGTGATTTTTGTTGATAA+CGG + chr5.2:20609592-20609611 MS.gene036268:intron 20.0%
! AACTAATCACAAGTATTCTT+TGG + chr5.2:20611880-20611899 MS.gene036268:CDS 25.0%
! ACATTGTATTAAGTGAATCA+GGG + chr5.2:20611326-20611345 MS.gene036268:intron 25.0%
! ACTAATCACAAGTATTCTTT+GGG + chr5.2:20611881-20611900 MS.gene036268:CDS 25.0%
! ATAGAAGTGATTTCTCTATT+TGG - chr5.2:20610096-20610115 None:intergenic 25.0%
! ATCAAATAAGTCAATCCAAA+AGG + chr5.2:20609065-20609084 MS.gene036268:intron 25.0%
! ATCAATATTGATCATCAGTA+TGG - chr5.2:20609571-20609590 None:intergenic 25.0%
! GATCGATATAGCATATAATT+CGG - chr5.2:20611393-20611412 None:intergenic 25.0%
! TACATTGTATTAAGTGAATC+AGG + chr5.2:20611325-20611344 MS.gene036268:intron 25.0%
! TCAAATAAGTCAATCCAAAA+GGG + chr5.2:20609066-20609085 MS.gene036268:intron 25.0%
! TCATTAACAAAATACATACC+TGG - chr5.2:20611969-20611988 None:intergenic 25.0%
! TCCCTAAAAACATTAACATT+CGG - chr5.2:20608555-20608574 None:intergenic 25.0%
! TCTCTTACATGTTATATTCT+TGG + chr5.2:20609728-20609747 MS.gene036268:intron 25.0%
! TCTTTGTCTTTGTAAATTTG+TGG + chr5.2:20610777-20610796 MS.gene036268:intron 25.0%
! TGTTCTTACAATGAAGTTAA+TGG + chr5.2:20610480-20610499 MS.gene036268:CDS 25.0%
! TTAGGTATGGATATTAATTG+TGG + chr5.2:20610874-20610893 MS.gene036268:intron 25.0%
!! ACATTTTACTGCTTATGATT+TGG + chr5.2:20608743-20608762 MS.gene036268:CDS 25.0%
!! ATCTATTGAAACAAGCATTT+TGG + chr5.2:20612521-20612540 MS.gene036268:intron 25.0%
!! TTAAGTTGTTTATCCAAACA+TGG - chr5.2:20608849-20608868 None:intergenic 25.0%
!! TTGGGATTTCAAAAGTTTTA+AGG + chr5.2:20609687-20609706 MS.gene036268:intron 25.0%
!!! AAGTATGAGTTTTGTTTTTG+GGG + chr5.2:20610212-20610231 MS.gene036268:intron 25.0%
!!! AGTATTGAATGCAATGTTTT+GGG - chr5.2:20609825-20609844 None:intergenic 25.0%
!!! CTTTACATGTTTTGGTAAAT+TGG + chr5.2:20610155-20610174 MS.gene036268:intron 25.0%
!!! CTTTAGCTTATCTTTTGTTA+AGG - chr5.2:20608915-20608934 None:intergenic 25.0%
!!! TAGCTGAATTTAATTTTGCT+AGG + chr5.2:20610273-20610292 MS.gene036268:intron 25.0%
!!! TAGTATTGAATGCAATGTTT+TGG - chr5.2:20609826-20609845 None:intergenic 25.0%
!!! TCCGAATGTTAATGTTTTTA+GGG + chr5.2:20608551-20608570 MS.gene036268:CDS 25.0%
AAAAAGGATATTACCCTTAG+TGG + chr5.2:20612584-20612603 MS.gene036268:CDS 30.0%
AAAAGATTCCATAAATGCTG+GGG - chr5.2:20609463-20609482 None:intergenic 30.0%
AAATCCCAACTATAGATTTG+GGG - chr5.2:20609676-20609695 None:intergenic 30.0%
AAATGGCCTAAAAATATACG+AGG + chr5.2:20612444-20612463 MS.gene036268:CDS 30.0%
AATTCGGAAATCAGTAAACT+AGG - chr5.2:20611377-20611396 None:intergenic 30.0%
AGAGCTTAACTATTAGCATA+AGG - chr5.2:20610059-20610078 None:intergenic 30.0%
AGATATTAGAGAAAGATCTG+CGG - chr5.2:20609181-20609200 None:intergenic 30.0%
ATCTTAATGGCCAAATGATA+TGG - chr5.2:20611507-20611526 None:intergenic 30.0%
CAAAAGATTCCATAAATGCT+GGG - chr5.2:20609464-20609483 None:intergenic 30.0%
CAATAAGAAACCAAAGAGAA+CGG - chr5.2:20608464-20608483 None:intergenic 30.0%
CATGTAAGAGATAACTCAAA+CGG - chr5.2:20609719-20609738 None:intergenic 30.0%
CTCTACTTCCAGTATAAAAA+CGG - chr5.2:20612164-20612183 None:intergenic 30.0%
CTTACATGTTATATTCTTGG+TGG + chr5.2:20609731-20609750 MS.gene036268:intron 30.0%
GAAATCCCAACTATAGATTT+GGG - chr5.2:20609677-20609696 None:intergenic 30.0%
GTAGACAAACTAAGTTTACT+TGG - chr5.2:20612246-20612265 None:intergenic 30.0%
TAAAAATATACGAGGTTCAC+CGG + chr5.2:20612452-20612471 MS.gene036268:intron 30.0%
TAGGTATAATTTCAATGCTG+TGG + chr5.2:20608785-20608804 MS.gene036268:CDS 30.0%
TATACTGGAAGTAGAGTATA+TGG + chr5.2:20612168-20612187 MS.gene036268:CDS 30.0%
TCAAAAGATTCCATAAATGC+TGG - chr5.2:20609465-20609484 None:intergenic 30.0%
TCAATACTAAATTAGGTGAG+TGG + chr5.2:20609837-20609856 MS.gene036268:intron 30.0%
TGAAAAATATTACCGAGCTT+TGG + chr5.2:20611416-20611435 MS.gene036268:intron 30.0%
TGAAATCCCAACTATAGATT+TGG - chr5.2:20609678-20609697 None:intergenic 30.0%
TTACAGTGATTTCTCATACA+GGG + chr5.2:20612209-20612228 MS.gene036268:CDS 30.0%
TTTAAGTGACTGTGAGTATA+GGG + chr5.2:20611439-20611458 MS.gene036268:intron 30.0%
! AATCAGGGAATGTTTTCTTA+TGG + chr5.2:20611341-20611360 MS.gene036268:intron 30.0%
! CTCCGAATGTTAATGTTTTT+AGG + chr5.2:20608550-20608569 MS.gene036268:CDS 30.0%
! TAGTTGATTATTTTCAGCGA+AGG - chr5.2:20611865-20611884 None:intergenic 30.0%
! TATTGAAACAAGCATTTTGG+TGG + chr5.2:20612524-20612543 MS.gene036268:intron 30.0%
! TGCTTATGATTTGGAGAAAT+GGG + chr5.2:20608752-20608771 MS.gene036268:CDS 30.0%
! TGTTTTCGTATAAGCTATCA+TGG + chr5.2:20608941-20608960 MS.gene036268:intron 30.0%
! TTTCTTATTGGTTATGCTGT+TGG + chr5.2:20608474-20608493 MS.gene036268:CDS 30.0%
!! ATTTTGTTGTAATAGTTGCC+GGG + chr5.2:20611694-20611713 MS.gene036268:CDS 30.0%
!! GATTTTGTTGTAATAGTTGC+CGG + chr5.2:20611693-20611712 MS.gene036268:CDS 30.0%
!! GGTTATTTTGTCAAAGATGA+CGG - chr5.2:20609362-20609381 None:intergenic 30.0%
!!! AACGGTCATACTGATTTTTA+AGG + chr5.2:20609520-20609539 MS.gene036268:intron 30.0%
!!! ACGGTCATACTGATTTTTAA+GGG + chr5.2:20609521-20609540 MS.gene036268:intron 30.0%
!!! AGTATGAGTTTTGTTTTTGG+GGG + chr5.2:20610213-20610232 MS.gene036268:intron 30.0%
!!! AGTGCTAATTTTTTGTGTTC+CGG - chr5.2:20611072-20611091 None:intergenic 30.0%
!!! TTAATGTTTTTAGGGATCCT+AGG + chr5.2:20608559-20608578 MS.gene036268:CDS 30.0%
!!! TTGTATTGACTTTTGAGTGT+AGG + chr5.2:20610650-20610669 MS.gene036268:intron 30.0%
AAAAGGCAAGTTTGGCAAAT+TGG + chr5.2:20611026-20611045 MS.gene036268:CDS 35.0%
AAAGGCAAGTTTGGCAAATT+GGG + chr5.2:20611027-20611046 MS.gene036268:CDS 35.0%
AACAATAACCCCAGCATTTA+TGG + chr5.2:20609452-20609471 MS.gene036268:intron 35.0%
AATCACAAGTATTCTTTGGG+TGG + chr5.2:20611884-20611903 MS.gene036268:CDS 35.0%
AATCCCAACTATAGATTTGG+GGG - chr5.2:20609675-20609694 None:intergenic 35.0%
ACTTCCAGTATAAAAACGGT+AGG - chr5.2:20612160-20612179 None:intergenic 35.0%
AGTCCATCATATAAGCTTCT+TGG - chr5.2:20611570-20611589 None:intergenic 35.0%
AGTTTGTCTACAACAACCAA+TGG + chr5.2:20612255-20612274 MS.gene036268:CDS 35.0%
ATACTAAATTAGGTGAGTGG+CGG + chr5.2:20609840-20609859 MS.gene036268:intron 35.0%
ATCACAAGTATTCTTTGGGT+GGG + chr5.2:20611885-20611904 MS.gene036268:CDS 35.0%
ATGAACGTTGGAGATTTAGA+TGG + chr5.2:20612396-20612415 MS.gene036268:CDS 35.0%
ATGTTTAATGTTGGACAAGC+TGG + chr5.2:20608513-20608532 MS.gene036268:CDS 35.0%
ATTCTTCATTACACGAACGA+GGG + chr5.2:20609256-20609275 MS.gene036268:intron 35.0%
ATTGAACAAGGTAGAGAAAG+AGG + chr5.2:20612296-20612315 MS.gene036268:CDS 35.0%
CAATCCAAAAGGGAGTTATA+AGG + chr5.2:20609076-20609095 MS.gene036268:intron 35.0%
CCAGTAAGAACTAGAATAAC+TGG - chr5.2:20611822-20611841 None:intergenic 35.0%
GAACAAGAAGAAGATGATGA+TGG - chr5.2:20608103-20608122 None:intergenic 35.0%
GAAGTAGAGTATATGGATTC+GGG + chr5.2:20612175-20612194 MS.gene036268:CDS 35.0%
GAGAAGAAGCTTATTGAACA+AGG + chr5.2:20612284-20612303 MS.gene036268:CDS 35.0%
GGAAGTAGAGTATATGGATT+CGG + chr5.2:20612174-20612193 MS.gene036268:CDS 35.0%
GTAAAATGTGACTCTGATGA+CGG + chr5.2:20611636-20611655 MS.gene036268:CDS 35.0%
GTTACAGTGATTTCTCATAC+AGG + chr5.2:20612208-20612227 MS.gene036268:CDS 35.0%
GTTTAAGTGACTGTGAGTAT+AGG + chr5.2:20611438-20611457 MS.gene036268:intron 35.0%
GTTTATCCAAACATGGTCAA+AGG - chr5.2:20608842-20608861 None:intergenic 35.0%
TACCTCTACAGTGTTATCAA+GGG + chr5.2:20609791-20609810 MS.gene036268:intron 35.0%
TACTATAGTACCACGAGAAA+AGG - chr5.2:20611307-20611326 None:intergenic 35.0%
TACTCCAAAAGGGAGTTATA+AGG + chr5.2:20609928-20609947 MS.gene036268:intron 35.0%
TATGAATTGGATGGTTTCCA+AGG + chr5.2:20610828-20610847 MS.gene036268:intron 35.0%
TCAAACAGTAGATAAGATGC+TGG + chr5.2:20609034-20609053 MS.gene036268:intron 35.0%
TCTCCAAGAAGCTTATATGA+TGG + chr5.2:20611564-20611583 MS.gene036268:CDS 35.0%
TGATTTCCCATTTGACAGAA+AGG + chr5.2:20611465-20611484 MS.gene036268:intron 35.0%
TGCTGGATTGAGTATTTCAA+CGG + chr5.2:20609502-20609521 MS.gene036268:intron 35.0%
TGTTTAATGTTGGACAAGCT+GGG + chr5.2:20608514-20608533 MS.gene036268:CDS 35.0%
TTAAGTGACTGTGAGTATAG+GGG + chr5.2:20611440-20611459 MS.gene036268:intron 35.0%
TTACCTCTACAGTGTTATCA+AGG + chr5.2:20609790-20609809 MS.gene036268:intron 35.0%
TTGCAGATGAACAAGGAAAA+AGG + chr5.2:20612568-20612587 MS.gene036268:CDS 35.0%
TTTAACGGAGATCCGAAAAA+AGG + chr5.2:20611009-20611028 MS.gene036268:CDS 35.0%
! AATATGGTGTTGAGTGCAAT+AGG + chr5.2:20610367-20610386 MS.gene036268:intron 35.0%
! CAGAGTCACATTTTACATCA+CGG - chr5.2:20611632-20611651 None:intergenic 35.0%
! CATATTTCTGTGATGAACGT+TGG + chr5.2:20612384-20612403 MS.gene036268:CDS 35.0%
! CATGATAGTGATGATGATGA+TGG + chr5.2:20608696-20608715 MS.gene036268:CDS 35.0%
! CGTTCTCTTTGGTTTCTTAT+TGG + chr5.2:20608462-20608481 MS.gene036268:CDS 35.0%
! CTGCTTATGATTTGGAGAAA+TGG + chr5.2:20608751-20608770 MS.gene036268:CDS 35.0%
! GCTTATGATTTGGAGAAATG+GGG + chr5.2:20608753-20608772 MS.gene036268:CDS 35.0%
! GGTGAACCTCGTATATTTTT+AGG - chr5.2:20612453-20612472 None:intergenic 35.0%
! GTTTTTGTAGGTTACACAAC+AGG + chr5.2:20610389-20610408 MS.gene036268:intron 35.0%
! TCAACCTTATAACTCCCTTT+TGG - chr5.2:20609935-20609954 None:intergenic 35.0%
! TCAGTAATTTTGTCATCACG+AGG - chr5.2:20609879-20609898 None:intergenic 35.0%
! TCTTTTACCTGGTAAACAGA+TGG + chr5.2:20611761-20611780 MS.gene036268:CDS 35.0%
! TGAGTGCAATAGGTTTTTGT+AGG + chr5.2:20610377-20610396 MS.gene036268:intron 35.0%
! TGGTGATGTTGTTCTCTAAA+TGG + chr5.2:20612427-20612446 MS.gene036268:CDS 35.0%
! TGTCTGTGCTTTACATGTTT+TGG + chr5.2:20610147-20610166 MS.gene036268:intron 35.0%
!! ATGCTGTTGAGTTTGTTAGA+GGG + chr5.2:20608634-20608653 MS.gene036268:CDS 35.0%
!! CCAGTTATTCTAGTTCTTAC+TGG + chr5.2:20611819-20611838 MS.gene036268:CDS 35.0%
!! GGAGAATTGGTTGATTTTGT+CGG - chr5.2:20608280-20608299 None:intergenic 35.0%
!! GTTATTCTAGTTCTTACTGG+TGG + chr5.2:20611822-20611841 MS.gene036268:CDS 35.0%
!! TATGCTGTTGAGTTTGTTAG+AGG + chr5.2:20608633-20608652 MS.gene036268:CDS 35.0%
!! TGATGATGATGATGGTCTTA+TGG + chr5.2:20608704-20608723 MS.gene036268:CDS 35.0%
!! TGATGATGGTGAATCTTTGT+TGG - chr5.2:20608089-20608108 None:intergenic 35.0%
!!! TTGCCAAACTTGCCTTTTTT+CGG - chr5.2:20611024-20611043 None:intergenic 35.0%
AAAGCAGCCTTTCTGTCAAA+TGG - chr5.2:20611475-20611494 None:intergenic 40.0%
AACATGTAAAGCACAGACAC+TGG - chr5.2:20610146-20610165 None:intergenic 40.0%
AAGATGCGTTGTTGGAGAAT+TGG - chr5.2:20608293-20608312 None:intergenic 40.0%
AAGCAGCCTTTCTGTCAAAT+GGG - chr5.2:20611474-20611493 None:intergenic 40.0%
AATGTTCCCATGAACGACAT+GGG + chr5.2:20612096-20612115 MS.gene036268:CDS 40.0%
AATTCACTCGTAGTTGCCAT+TGG - chr5.2:20611189-20611208 None:intergenic 40.0%
ACACCATCCTTCTTATCCAA+GGG - chr5.2:20611147-20611166 None:intergenic 40.0%
ACTATAGATTTGGGGGATCT+CGG - chr5.2:20609668-20609687 None:intergenic 40.0%
ACTGAATCTGCCATTGAACA+AGG + chr5.2:20610916-20610935 MS.gene036268:CDS 40.0%
AGAAACAAGTGGGGATTTGA+AGG + chr5.2:20610543-20610562 MS.gene036268:CDS 40.0%
AGAGAGAGATGTTGCAGAAT+GGG - chr5.2:20608212-20608231 None:intergenic 40.0%
AGATCCCCCAAATCTATAGT+TGG + chr5.2:20609668-20609687 MS.gene036268:intron 40.0%
AGATTTAGATGGAAGTCACG+TGG + chr5.2:20612407-20612426 MS.gene036268:CDS 40.0%
AGGGAGTTATAAGGTTGACT+TGG + chr5.2:20609937-20609956 MS.gene036268:intron 40.0%
ATAAAAACGGTAGGTCCTTC+CGG - chr5.2:20612151-20612170 None:intergenic 40.0%
ATACTCGTAAACAGTAGCCA+CGG - chr5.2:20610698-20610717 None:intergenic 40.0%
ATGCTGGGGTTATTGTTCTA+AGG - chr5.2:20609449-20609468 None:intergenic 40.0%
ATGGCAACTACGAGTGAATT+AGG + chr5.2:20611189-20611208 MS.gene036268:CDS 40.0%
ATTTGAAGGGTAAGGGTTTG+AGG + chr5.2:20610557-20610576 MS.gene036268:intron 40.0%
CAGTCACTTAAACCAAAGCT+CGG - chr5.2:20611431-20611450 None:intergenic 40.0%
CATTCTTCATTACACGAACG+AGG + chr5.2:20609255-20609274 MS.gene036268:intron 40.0%
CATTGGACCAATGATAGCTA+AGG - chr5.2:20611172-20611191 None:intergenic 40.0%
CCAAAAGGGAGTTATAAGGT+TGG + chr5.2:20609080-20609099 MS.gene036268:intron 40.0%
CTGTCGACATTACTCCAAAA+GGG + chr5.2:20609918-20609937 MS.gene036268:intron 40.0%
CTTAGCTATCATTGGTCCAA+TGG + chr5.2:20611170-20611189 MS.gene036268:CDS 40.0%
CTTTGCGATGTCAATAGCTT+CGG - chr5.2:20611667-20611686 None:intergenic 40.0%
GAAACAAGTGGGGATTTGAA+GGG + chr5.2:20610544-20610563 MS.gene036268:CDS 40.0%
GAATTAGGTGGCAGTTATTC+AGG + chr5.2:20611204-20611223 MS.gene036268:CDS 40.0%
GATCCCCCAAATCTATAGTT+GGG + chr5.2:20609669-20609688 MS.gene036268:intron 40.0%
GATCCGAAAAAAGGCAAGTT+TGG + chr5.2:20611018-20611037 MS.gene036268:CDS 40.0%
GCACTAGCTGAAATCATCTT+TGG + chr5.2:20611933-20611952 MS.gene036268:CDS 40.0%
GGAACATTGGTAAATGACTC+GGG - chr5.2:20612084-20612103 None:intergenic 40.0%
GGGAACATTGGTAAATGACT+CGG - chr5.2:20612085-20612104 None:intergenic 40.0%
GGTAGGGCTATGTTTAATGT+TGG + chr5.2:20608504-20608523 MS.gene036268:CDS 40.0%
GTAGGTTACACAACAGGATT+TGG + chr5.2:20610395-20610414 MS.gene036268:intron 40.0%
GTTGCTGATGTTCTTAAAGC+AGG + chr5.2:20610748-20610767 MS.gene036268:CDS 40.0%
TAGCAACTTATCAGCTTCGT+CGG + chr5.2:20609300-20609319 MS.gene036268:intron 40.0%
TCACAAGTATTCTTTGGGTG+GGG + chr5.2:20611886-20611905 MS.gene036268:CDS 40.0%
TCTACAGTGTTATCAAGGGT+AGG + chr5.2:20609795-20609814 MS.gene036268:intron 40.0%
TCTGTCGACATTACTCCAAA+AGG + chr5.2:20609917-20609936 MS.gene036268:intron 40.0%
TGCTGGGGTTATTGTTCTAA+GGG - chr5.2:20609448-20609467 None:intergenic 40.0%
TGTTGAACACAACCACGAAA+CGG - chr5.2:20610438-20610457 None:intergenic 40.0%
TTCAGCTTTGCAGATGAACA+AGG + chr5.2:20612561-20612580 MS.gene036268:intron 40.0%
TTCGTGGTTGTGTTCAACAA+GGG + chr5.2:20610439-20610458 MS.gene036268:CDS 40.0%
TTGGGGTGGTGAAGAATTTA+GGG - chr5.2:20608146-20608165 None:intergenic 40.0%
TTGTCTACAACAACCAATGG+TGG + chr5.2:20612258-20612277 MS.gene036268:CDS 40.0%
TTTCGTGGTTGTGTTCAACA+AGG + chr5.2:20610438-20610457 MS.gene036268:CDS 40.0%
TTTGAGCCTTTGACCATGTT+TGG + chr5.2:20608833-20608852 MS.gene036268:intron 40.0%
! AAGACGATATCCTACGCTTT+TGG + chr5.2:20611603-20611622 MS.gene036268:CDS 40.0%
! ATCTTTGGAGAGTTCAATCC+AGG + chr5.2:20611948-20611967 MS.gene036268:CDS 40.0%
! CCAACCTTATAACTCCCTTT+TGG - chr5.2:20609083-20609102 None:intergenic 40.0%
! TACCCTTGATAACACTGTAG+AGG - chr5.2:20609796-20609815 None:intergenic 40.0%
! TGTGCTAGCAAGGATCTTTT+GGG + chr5.2:20610513-20610532 MS.gene036268:CDS 40.0%
! TTGTGCTAGCAAGGATCTTT+TGG + chr5.2:20610512-20610531 MS.gene036268:CDS 40.0%
!! ACAAGCTGGGTTGAGTTTTT+GGG + chr5.2:20608527-20608546 MS.gene036268:CDS 40.0%
!! AGGACCTACCGTTTTTATAC+TGG + chr5.2:20612153-20612172 MS.gene036268:CDS 40.0%
!! ATTCTAGTTCTTACTGGTGG+AGG + chr5.2:20611825-20611844 MS.gene036268:CDS 40.0%
!! ATTGGTTGATTTTGTCGGAG+AGG - chr5.2:20608275-20608294 None:intergenic 40.0%
!! GAAGTTGATTTTGATGCAGC+TGG + chr5.2:20612036-20612055 MS.gene036268:intron 40.0%
!! GAGTTATAAGGTTGACTTGG+TGG + chr5.2:20609940-20609959 MS.gene036268:intron 40.0%
!! GAGTTTGTTAGAGGGATTCA+AGG + chr5.2:20608642-20608661 MS.gene036268:CDS 40.0%
!! TTGATTTTGATGCAGCTGGA+AGG + chr5.2:20612040-20612059 MS.gene036268:intron 40.0%
!! TTGGTTGATTTTGTCGGAGA+GGG - chr5.2:20608274-20608293 None:intergenic 40.0%
!!! ATGTTTTTAGGGATCCTAGG+TGG + chr5.2:20608562-20608581 MS.gene036268:CDS 40.0%
!!! CGAGTTAGTCTTCTTTTACC+TGG + chr5.2:20611750-20611769 MS.gene036268:CDS 40.0%
!!! GAGTTTTGTTTTTGGGGGAT+TGG + chr5.2:20610218-20610237 MS.gene036268:intron 40.0%
!!! TGTTTTTAGGGATCCTAGGT+GGG + chr5.2:20608563-20608582 MS.gene036268:CDS 40.0%
!!! TTTTGGAGTAATGTCGACAG+AGG - chr5.2:20609918-20609937 None:intergenic 40.0%
AACTTATCAGCTTCGTCGGT+GGG + chr5.2:20609304-20609323 MS.gene036268:intron 45.0%
AAGAGAACGGTTAAATGCCG+CGG - chr5.2:20608451-20608470 None:intergenic 45.0%
AAGATCCTCTGTCTCAAGTG+TGG - chr5.2:20611727-20611746 None:intergenic 45.0%
AAGGGAGTTATAAGGTTGGC+TGG + chr5.2:20609084-20609103 MS.gene036268:intron 45.0%
AAGTGGGGATTTGAAGGGTA+AGG + chr5.2:20610549-20610568 MS.gene036268:intron 45.0%
ACAAGGTCCATCTGTTTACC+AGG - chr5.2:20611771-20611790 None:intergenic 45.0%
ACCACGAGAAAAGGATCGTT+AGG - chr5.2:20611298-20611317 None:intergenic 45.0%
ACCTCAAGATGTTTGCACAC+CGG + chr5.2:20611050-20611069 MS.gene036268:CDS 45.0%
ACGGTCACAAACGATGTTCT+TGG - chr5.2:20609343-20609362 None:intergenic 45.0%
AGAAATGGGGAGAGTTCTCT+AGG + chr5.2:20608766-20608785 MS.gene036268:CDS 45.0%
AGAGGTTGTTCTTGTGGAGA+TGG - chr5.2:20608235-20608254 None:intergenic 45.0%
AGAGTATATGGATTCGGGCA+TGG + chr5.2:20612180-20612199 MS.gene036268:CDS 45.0%
AGATACCACACTTGAGACAG+AGG + chr5.2:20611719-20611738 MS.gene036268:CDS 45.0%
AGTGGGGATTTGAAGGGTAA+GGG + chr5.2:20610550-20610569 MS.gene036268:intron 45.0%
ATCATCAGTATGGCGTTCTG+CGG - chr5.2:20609561-20609580 None:intergenic 45.0%
ATCTGCCATTGAACAAGGAC+TGG + chr5.2:20610921-20610940 MS.gene036268:CDS 45.0%
ATGCGCCTTGGACTGTTTAA+CGG + chr5.2:20610994-20611013 MS.gene036268:CDS 45.0%
ATGTCGACAGAGGTTTGACT+AGG - chr5.2:20609908-20609927 None:intergenic 45.0%
ATTGGTAAGATGGGATGCCA+AGG - chr5.2:20608326-20608345 None:intergenic 45.0%
CAATGTTCCCATGAACGACA+TGG + chr5.2:20612095-20612114 MS.gene036268:CDS 45.0%
CAGACCACCATTGGTAAGAT+GGG - chr5.2:20608335-20608354 None:intergenic 45.0%
CATCCTTCTTATCCAAGGGA+AGG - chr5.2:20611143-20611162 None:intergenic 45.0%
CATGTCGTTCATGGGAACAT+TGG - chr5.2:20612097-20612116 None:intergenic 45.0%
CGACAATAAGTTCCTTCCCT+TGG + chr5.2:20611128-20611147 MS.gene036268:CDS 45.0%
CGGCATTTAACCGTTCTCTT+TGG + chr5.2:20608451-20608470 MS.gene036268:CDS 45.0%
CTTCACCAGTCCTTGTTCAA+TGG - chr5.2:20610929-20610948 None:intergenic 45.0%
CTTCCCTTGGATAAGAAGGA+TGG + chr5.2:20611141-20611160 MS.gene036268:CDS 45.0%
GACACCATCCTTCTTATCCA+AGG - chr5.2:20611148-20611167 None:intergenic 45.0%
GAGAGAGAGATGTTGCAGAA+TGG - chr5.2:20608213-20608232 None:intergenic 45.0%
GATCCATTGAAGTTGACACC+AGG - chr5.2:20608387-20608406 None:intergenic 45.0%
GATCTCCGTTAAACAGTCCA+AGG - chr5.2:20611002-20611021 None:intergenic 45.0%
GATGAGAGAGGTTGTTCTTG+TGG - chr5.2:20608241-20608260 None:intergenic 45.0%
GCAACTACGAGTGAATTAGG+TGG + chr5.2:20611192-20611211 MS.gene036268:CDS 45.0%
GCATAAGCAGAACCAACCAT+AGG - chr5.2:20608618-20608637 None:intergenic 45.0%
GCTTCTTCTCAAACCACCAT+TGG - chr5.2:20612274-20612293 None:intergenic 45.0%
GGTGTCTCCTTAGCTATCAT+TGG + chr5.2:20611162-20611181 MS.gene036268:CDS 45.0%
GTTCCTTCCCTTGGATAAGA+AGG + chr5.2:20611137-20611156 MS.gene036268:CDS 45.0%
GTTGGGGTGGTGAAGAATTT+AGG - chr5.2:20608147-20608166 None:intergenic 45.0%
TAAAAACGGTAGGTCCTTCC+GGG - chr5.2:20612150-20612169 None:intergenic 45.0%
TCAGACCACCATTGGTAAGA+TGG - chr5.2:20608336-20608355 None:intergenic 45.0%
TGTCGACAGAGGTTTGACTA+GGG - chr5.2:20609907-20609926 None:intergenic 45.0%
TTCAGCGAAGGAGACATCAA+GGG - chr5.2:20611853-20611872 None:intergenic 45.0%
TTCTCTGTTCAAATGCGCCT+TGG + chr5.2:20610982-20611001 MS.gene036268:CDS 45.0%
TTGAGCATCTGTTTCAGCCT+AGG + chr5.2:20609633-20609652 MS.gene036268:intron 45.0%
TTGGCATCCCATCTTACCAA+TGG + chr5.2:20608325-20608344 MS.gene036268:CDS 45.0%
TTTCAGCGAAGGAGACATCA+AGG - chr5.2:20611854-20611873 None:intergenic 45.0%
! AGGGAGTTATAAGGTTGGCT+GGG + chr5.2:20609085-20609104 MS.gene036268:intron 45.0%
! CATTGAACAAGGACTGGTGA+AGG + chr5.2:20610927-20610946 MS.gene036268:CDS 45.0%
! GCAAAGCTGAAGTGTTCACA+AGG - chr5.2:20612552-20612571 None:intergenic 45.0%
! TGATTTTGTCGGAGAGGGTT+AGG - chr5.2:20608269-20608288 None:intergenic 45.0%
!! AGAGGGATTCAAGGTGTTGA+GGG + chr5.2:20608651-20608670 MS.gene036268:CDS 45.0%
!! ATAAGGTTGACTTGGTGGCT+GGG + chr5.2:20609945-20609964 MS.gene036268:intron 45.0%
!! ATGCTGTTGGTGTTGAAGGT+AGG + chr5.2:20608487-20608506 MS.gene036268:CDS 45.0%
!! CCAGCAGTTGATGACTACAT+CGG - chr5.2:20609488-20609507 None:intergenic 45.0%
!! GACAAGCTGGGTTGAGTTTT+TGG + chr5.2:20608526-20608545 MS.gene036268:CDS 45.0%
!! GGACTGGTTAGAAACAAGTG+GGG + chr5.2:20610534-20610553 MS.gene036268:CDS 45.0%
!! GGGACTGGTTAGAAACAAGT+GGG + chr5.2:20610533-20610552 MS.gene036268:CDS 45.0%
!! GGTTATGCTGTTGGTGTTGA+AGG + chr5.2:20608483-20608502 MS.gene036268:CDS 45.0%
!! GTTTTTAGGGATCCTAGGTG+GGG + chr5.2:20608564-20608583 MS.gene036268:CDS 45.0%
!! TAGAGGGATTCAAGGTGTTG+AGG + chr5.2:20608650-20608669 MS.gene036268:CDS 45.0%
!! TATAAGGTTGACTTGGTGGC+TGG + chr5.2:20609944-20609963 MS.gene036268:intron 45.0%
!! TGCTGTTGGTGTTGAAGGTA+GGG + chr5.2:20608488-20608507 MS.gene036268:CDS 45.0%
!! TGGGACTGGTTAGAAACAAG+TGG + chr5.2:20610532-20610551 MS.gene036268:CDS 45.0%
!! TTTTGACTCTCCAGCATCGT+CGG - chr5.2:20609398-20609417 None:intergenic 45.0%
!! TTTTTAGGGATCCTAGGTGG+GGG + chr5.2:20608565-20608584 MS.gene036268:CDS 45.0%
!!! TAGCAAGGATCTTTTGGGAC+TGG + chr5.2:20610518-20610537 MS.gene036268:CDS 45.0%
!!! TTGTTTTTGGGGGATTGGCA+TGG + chr5.2:20610223-20610242 MS.gene036268:intron 45.0%
AATCCGACAAGCTGGGATTC+CGG - chr5.2:20612474-20612493 None:intergenic 50.0%
AATGGGTAGTGTGAGTGTGG+TGG - chr5.2:20608195-20608214 None:intergenic 50.0%
ACGACTGAATCCGACAAGCT+GGG - chr5.2:20612481-20612500 None:intergenic 50.0%
ACTTATCAGCTTCGTCGGTG+GGG + chr5.2:20609305-20609324 MS.gene036268:intron 50.0%
AGATCCTTGCTAGCACAAGC+AGG - chr5.2:20610510-20610529 None:intergenic 50.0%
AGCACTTGAAGCTGCAAGAC+AGG + chr5.2:20611086-20611105 MS.gene036268:CDS 50.0%
ATTTGGGGGATCTCGGACAT+TGG - chr5.2:20609661-20609680 None:intergenic 50.0%
CAACTTATCAGCTTCGTCGG+TGG + chr5.2:20609303-20609322 MS.gene036268:intron 50.0%
CACTTGAAGCTGCAAGACAG+GGG + chr5.2:20611088-20611107 MS.gene036268:CDS 50.0%
CAGAATGGGTAGTGTGAGTG+TGG - chr5.2:20608198-20608217 None:intergenic 50.0%
CCGATGTAGTCATCAACTGC+TGG + chr5.2:20609485-20609504 MS.gene036268:intron 50.0%
CGCATTCCCATGTCGTTCAT+GGG - chr5.2:20612105-20612124 None:intergenic 50.0%
CGGCGGAGACAATAACTTGA+GGG - chr5.2:20608431-20608450 None:intergenic 50.0%
CTCAAGTGTGGTATCTAGCC+CGG - chr5.2:20611715-20611734 None:intergenic 50.0%
CTCCATGGCATTGCAACCAA+TGG + chr5.2:20608360-20608379 MS.gene036268:CDS 50.0%
CTTAGCAGCTTTCACTGCCT+CGG + chr5.2:20609132-20609151 MS.gene036268:intron 50.0%
GAAGTTGACACCAGGACCAT+TGG - chr5.2:20608379-20608398 None:intergenic 50.0%
GATCCTTCACGTGGTTATCC+CGG + chr5.2:20612129-20612148 MS.gene036268:CDS 50.0%
GCACTTGAAGCTGCAAGACA+GGG + chr5.2:20611087-20611106 MS.gene036268:CDS 50.0%
GCATCCCATCTTACCAATGG+TGG + chr5.2:20608328-20608347 MS.gene036268:CDS 50.0%
GGAGATGGAAGATGCGTTGT+TGG - chr5.2:20608301-20608320 None:intergenic 50.0%
GGCGCATTTGAACAGAGAAC+AGG - chr5.2:20610981-20611000 None:intergenic 50.0%
GGGTGGTGAAGAATTTAGGG+AGG - chr5.2:20608143-20608162 None:intergenic 50.0%
GGTTAGGAGAGAGATGAGAG+AGG - chr5.2:20608253-20608272 None:intergenic 50.0%
GTAAGATGGGATGCCAAGGT+GGG - chr5.2:20608322-20608341 None:intergenic 50.0%
TCAAGTTATTGTCTCCGCCG+CGG + chr5.2:20608431-20608450 MS.gene036268:CDS 50.0%
TCAGCGAAGGAGACATCAAG+GGG - chr5.2:20611852-20611871 None:intergenic 50.0%
TCCGGTGTGCAAACATCTTG+AGG - chr5.2:20611054-20611073 None:intergenic 50.0%
TCGCATTCCCATGTCGTTCA+TGG - chr5.2:20612106-20612125 None:intergenic 50.0%
TGAACACAACCACGAAACGG+TGG - chr5.2:20610435-20610454 None:intergenic 50.0%
TGTTCCTGCTTGTGCTAGCA+AGG + chr5.2:20610503-20610522 MS.gene036268:CDS 50.0%
TTAGCAGCTTTCACTGCCTC+GGG + chr5.2:20609133-20609152 MS.gene036268:intron 50.0%
! ATCACGGCAACCAAAAGCGT+AGG - chr5.2:20611616-20611635 None:intergenic 50.0%
! CTTTTCCACCAGCTTCACCA+GGG - chr5.2:20611914-20611933 None:intergenic 50.0%
! GACCATTGGTTGCAATGCCA+TGG - chr5.2:20608365-20608384 None:intergenic 50.0%
! GCCTAACGATCCTTTTCTCG+TGG + chr5.2:20611294-20611313 MS.gene036268:intron 50.0%
! GGTCCTGGTGTCAACTTCAA+TGG + chr5.2:20608381-20608400 MS.gene036268:CDS 50.0%
! GTGAGTGTGGTGGTTTGCAT+GGG - chr5.2:20608185-20608204 None:intergenic 50.0%
! TGAACAAGGACTGGTGAAGG+AGG + chr5.2:20610930-20610949 MS.gene036268:CDS 50.0%
! TGTGAGTGTGGTGGTTTGCA+TGG - chr5.2:20608186-20608205 None:intergenic 50.0%
!! TAAGGTTGACTTGGTGGCTG+GGG + chr5.2:20609946-20609965 MS.gene036268:intron 50.0%
AACTCCTGGGGAGGATCCTA+TGG + chr5.2:20608599-20608618 MS.gene036268:CDS 55.0%
ACTTACCAGCCACCGTTTCG+TGG + chr5.2:20610423-20610442 MS.gene036268:CDS 55.0%
AGAACGGTTAAATGCCGCGG+CGG - chr5.2:20608448-20608467 None:intergenic 55.0%
ATGCGAGCTGATCCTTCACG+TGG + chr5.2:20612120-20612139 MS.gene036268:CDS 55.0%
CAGCAGCAACACGCGATACA+AGG - chr5.2:20611788-20611807 None:intergenic 55.0%
CTTATCAGCTTCGTCGGTGG+GGG + chr5.2:20609306-20609325 MS.gene036268:intron 55.0%
CTTCACGTGGTTATCCCGGA+AGG + chr5.2:20612133-20612152 MS.gene036268:CDS 55.0%
CTTCCGGGATAACCACGTGA+AGG - chr5.2:20612135-20612154 None:intergenic 55.0%
GACGACTGAATCCGACAAGC+TGG - chr5.2:20612482-20612501 None:intergenic 55.0%
GAGAGGACAGGAAACTCCTG+GGG + chr5.2:20608587-20608606 MS.gene036268:CDS 55.0%
GCATCTTCCATCTCCCACCT+TGG + chr5.2:20608306-20608325 MS.gene036268:CDS 55.0%
GCGGCGGAGACAATAACTTG+AGG - chr5.2:20608432-20608451 None:intergenic 55.0%
GGAGAGCTTCAGACCACCAT+TGG - chr5.2:20608344-20608363 None:intergenic 55.0%
GGAGAGGACAGGAAACTCCT+GGG + chr5.2:20608586-20608605 MS.gene036268:CDS 55.0%
GGCATTGCAACCAATGGTCC+TGG + chr5.2:20608366-20608385 MS.gene036268:CDS 55.0%
GGCTGGGGTTGGAAAGCTTA+TGG + chr5.2:20609961-20609980 MS.gene036268:intron 55.0%
GGTAAGATGGGATGCCAAGG+TGG - chr5.2:20608323-20608342 None:intergenic 55.0%
TCACCGGAATCCCAGCTTGT+CGG + chr5.2:20612468-20612487 MS.gene036268:intron 55.0%
TGCATGGGTAGGAGGGAGAA+GGG - chr5.2:20608170-20608189 None:intergenic 55.0%
TTCACTGCCTCGGGATGAGT+CGG + chr5.2:20609142-20609161 MS.gene036268:intron 55.0%
TTGCATGGGTAGGAGGGAGA+AGG - chr5.2:20608171-20608190 None:intergenic 55.0%
! ATTCTTTGGGTGGGGTACCC+TGG + chr5.2:20611894-20611913 MS.gene036268:CDS 55.0%
! GCTTTTCCACCAGCTTCACC+AGG - chr5.2:20611915-20611934 None:intergenic 55.0%
! GGTGGTTTGCATGGGTAGGA+GGG - chr5.2:20608177-20608196 None:intergenic 55.0%
! GTGTGGTGGTTTGCATGGGT+AGG - chr5.2:20608181-20608200 None:intergenic 55.0%
! GTTAAGACCGACTCATCCCG+AGG - chr5.2:20609152-20609171 None:intergenic 55.0%
! TGGTGGTCTGAAGCTCTCCA+TGG + chr5.2:20608345-20608364 MS.gene036268:CDS 55.0%
! TGGTGGTTTGCATGGGTAGG+AGG - chr5.2:20608178-20608197 None:intergenic 55.0%
!! GATCTCGGACATTGGCTCCT+AGG - chr5.2:20609653-20609672 None:intergenic 55.0%
AGCCACGGCATCACAGTCTG+AGG - chr5.2:20610683-20610702 None:intergenic 60.0%
AGGACAGGAAACTCCTGGGG+AGG + chr5.2:20608590-20608609 MS.gene036268:CDS 60.0%
ATCGTCGGCAGACTGAGGGT+TGG - chr5.2:20609383-20609402 None:intergenic 60.0%
CACAACCACGAAACGGTGGC+TGG - chr5.2:20610431-20610450 None:intergenic 60.0%
CAGCATCGTCGGCAGACTGA+GGG - chr5.2:20609387-20609406 None:intergenic 60.0%
CCAACCATAGGATCCTCCCC+AGG - chr5.2:20608606-20608625 None:intergenic 60.0%
CCTGGGGAGGATCCTATGGT+TGG + chr5.2:20608603-20608622 MS.gene036268:CDS 60.0%
GCATGGGTAGGAGGGAGAAG+GGG - chr5.2:20608169-20608188 None:intergenic 60.0%
GGGAGAGGACAGGAAACTCC+TGG + chr5.2:20608585-20608604 MS.gene036268:CDS 60.0%
GGTAGGAGGGAGAAGGGGTT+GGG - chr5.2:20608164-20608183 None:intergenic 60.0%
GTAGGAGGGAGAAGGGGTTG+GGG - chr5.2:20608163-20608182 None:intergenic 60.0%
TGCCTCAGACTGTGATGCCG+TGG + chr5.2:20610678-20610697 MS.gene036268:CDS 60.0%
TGGGATGCCAAGGTGGGAGA+TGG - chr5.2:20608316-20608335 None:intergenic 60.0%
!! GTTGACTTGGTGGCTGGGGT+TGG + chr5.2:20609950-20609969 MS.gene036268:intron 60.0%
AGGGATCCTAGGTGGGGGAG+AGG + chr5.2:20608570-20608589 MS.gene036268:CDS 65.0%
CCAGCATCGTCGGCAGACTG+AGG - chr5.2:20609388-20609407 None:intergenic 65.0%
CCTCAGTCTGCCGACGATGC+TGG + chr5.2:20609385-20609404 MS.gene036268:intron 65.0%
GGGTACCCTGGTGAAGCTGG+TGG + chr5.2:20611906-20611925 MS.gene036268:CDS 65.0%
GGGTAGGAGGGAGAAGGGGT+TGG - chr5.2:20608165-20608184 None:intergenic 65.0%
TCCTAGGTGGGGGAGAGGAC+AGG + chr5.2:20608575-20608594 MS.gene036268:CDS 65.0%
TCCTGTCCTCTCCCCCACCT+AGG - chr5.2:20608579-20608598 None:intergenic 65.0%
! GTGGGGTACCCTGGTGAAGC+TGG + chr5.2:20611903-20611922 MS.gene036268:CDS 65.0%
GGAGGGAGAAGGGGTTGGGG+TGG - chr5.2:20608160-20608179 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 20608075 20612603 20608075 ID=MS.gene036268
chr5.2 mRNA 20608075 20612603 20608075 ID=MS.gene036268.t1;Parent=MS.gene036268
chr5.2 exon 20608075 20608806 20608075 ID=MS.gene036268.t1.exon1;Parent=MS.gene036268.t1
chr5.2 CDS 20608075 20608806 20608075 ID=cds.MS.gene036268.t1;Parent=MS.gene036268.t1
chr5.2 exon 20610399 20610565 20610399 ID=MS.gene036268.t1.exon2;Parent=MS.gene036268.t1
chr5.2 CDS 20610399 20610565 20610399 ID=cds.MS.gene036268.t1;Parent=MS.gene036268.t1
chr5.2 exon 20610672 20610769 20610672 ID=MS.gene036268.t1.exon3;Parent=MS.gene036268.t1
chr5.2 CDS 20610672 20610769 20610672 ID=cds.MS.gene036268.t1;Parent=MS.gene036268.t1
chr5.2 exon 20610878 20611225 20610878 ID=MS.gene036268.t1.exon4;Parent=MS.gene036268.t1
chr5.2 CDS 20610878 20611225 20610878 ID=cds.MS.gene036268.t1;Parent=MS.gene036268.t1
chr5.2 exon 20611553 20611969 20611553 ID=MS.gene036268.t1.exon5;Parent=MS.gene036268.t1
chr5.2 CDS 20611553 20611969 20611553 ID=cds.MS.gene036268.t1;Parent=MS.gene036268.t1
chr5.2 exon 20612055 20612465 20612055 ID=MS.gene036268.t1.exon6;Parent=MS.gene036268.t1
chr5.2 CDS 20612055 20612465 20612055 ID=cds.MS.gene036268.t1;Parent=MS.gene036268.t1
chr5.2 exon 20612566 20612603 20612566 ID=MS.gene036268.t1.exon7;Parent=MS.gene036268.t1
chr5.2 CDS 20612566 20612603 20612566 ID=cds.MS.gene036268.t1;Parent=MS.gene036268.t1
Gene Sequence

>MS.gene036268

ATGATGTTTCACCAACAAAGATTCACCATCATCATCTTCTTCTTGTTCTCACTATTACTAATACACCTCCCTAAATTCTTCACCACCCCAACCCCTTCTCCCTCCTACCCATGCAAACCACCACACTCACACTACCCATTCTGCAACATCTCTCTCTCCATCTCCACAAGAACAACCTCTCTCATCTCTCTCCTAACCCTCTCCGACAAAATCAACCAATTCTCCAACAACGCATCTTCCATCTCCCACCTTGGCATCCCATCTTACCAATGGTGGTCTGAAGCTCTCCATGGCATTGCAACCAATGGTCCTGGTGTCAACTTCAATGGATCAGTTAAATCTGCTACAAGTTTCCCTCAAGTTATTGTCTCCGCCGCGGCATTTAACCGTTCTCTTTGGTTTCTTATTGGTTATGCTGTTGGTGTTGAAGGTAGGGCTATGTTTAATGTTGGACAAGCTGGGTTGAGTTTTTGGGCTCCGAATGTTAATGTTTTTAGGGATCCTAGGTGGGGGAGAGGACAGGAAACTCCTGGGGAGGATCCTATGGTTGGTTCTGCTTATGCTGTTGAGTTTGTTAGAGGGATTCAAGGTGTTGAGGGAATCAAGAATGTGTTGAATGATCATGATAGTGATGATGATGATGGTCTTATGGTGTCTGCTTGTTGTAAACATTTTACTGCTTATGATTTGGAGAAATGGGGAGAGTTCTCTAGGTATAATTTCAATGCTGTGGTAAGTTTTTTTTACTTGCTCTTTGCTTTGAGCCTTTGACCATGTTTGGATAAACAACTTAATTTGTAGCTAGCTTATTGCATAAACACTTATTATAAGCTATTTCCTTAACAAAAGATAAGCTAAAGTCAAACTGTTTTCGTATAAGCTATCATGGAGAGCAAATAAGCTGAAAACAAATTATAATTTATGAAAATGTATGTCATAGATTGTTATCATAAGTTCTCTCAAACAGTAGATAAGATGCTGGTAGACTAGATCAAATAAGTCAATCCAAAAGGGAGTTATAAGGTTGGCTGGGTAACTGTTTGTATTGTTTCTAAGACTTAGCAGCTTTCACTGCCTCGGGATGAGTCGGTCTTAACTCATCTCCGCAGATCTTTCTCTAATATCTCATTCGTTGATGAAGAGAATGAAATTTCTTGTTACTACTTCAAGACTCAGTTTTCATTCTTCATTACACGAACGAGGGATTTGTGCTTTTTATCTCTAGTAGCAACTTATCAGCTTCGTCGGTGGGGGTTTTCATATTGCCAAGAACATCGTTTGTGACCGTCATCTTTGACAAAATAACCAACCCTCAGTCTGCCGACGATGCTGGAGAGTCAAAAGTTAGTTTCGTAGTAAATTCACTAAAACCCTTAGAACAATAACCCCAGCATTTATGGAATCTTTTGACCGATGTAGTCATCAACTGCTGGATTGAGTATTTCAACGGTCATACTGATTTTTAAGGGCTTCAACAAAAAAACCGCAGAACGCCATACTGATGATCAATATTGATCTTTGTGATTTTTGTTGATAACGGTGTGTTGTATATTGACATTTGAGCATCTGTTTCAGCCTAGGAGCCAATGTCCGAGATCCCCCAAATCTATAGTTGGGATTTCAAAAGTTTTAAGGACTAAACCGTTTGAGTTATCTCTTACATGTTATATTCTTGGTGGTTTATTTGCTCTTTCAGTTGTGTTGTCTTTTTCGCATTACCTCTACAGTGTTATCAAGGGTAGGAGAACCCAAAACATTGCATTCAATACTAAATTAGGTGAGTGGCGGAAGCACATACTATCCTCGTGATGACAAAATTACTGAACAAACCCTAGTCAAACCTCTGTCGACATTACTCCAAAAGGGAGTTATAAGGTTGACTTGGTGGCTGGGGTTGGAAAGCTTATGGAAATAAGCTAAAAACAACATATGGACATGTTATAAGCTTTTTTCACAAGCTCTGTCAAACAGTCTTACAAATCCTTATGCTAATAGTTAAGCTCTTCTAGCAAGTCAATCCAAATAGAGAAATCACTTCTATTTTGTTGAATTATTTTGTGTCTACATGCCAGTGTCTGTGCTTTACATGTTTTGGTAAATTGGAAATGCTAATCTAAAATAGTAAATATTTGTTGATAAGTATGAGTTTTGTTTTTGGGGGATTGGCATGGTGTGTTAGTTAAGTCTGTTATTGTTGTTAGCTGAATTTAATTTTGCTAGGTACTTGCTTTCATCGCGCGCGTGTCAGAGATGTGCTTGATTCATTAGTCATATTCATTATTACTATGTTTGAATATGGTGTTGAGTGCAATAGGTTTTTGTAGGTTACACAACAGGATTTGGAAGACACTTACCAGCCACCGTTTCGTGGTTGTGTTCAACAAGGGAAAGCGAGCTGCTTGATGTGTTCTTACAATGAAGTTAATGGTGTTCCTGCTTGTGCTAGCAAGGATCTTTTGGGACTGGTTAGAAACAAGTGGGGATTTGAAGGGTAAGGGTTTGAGGAACTTTTGAAATTTGATTTCATTGAGAAAACACGCGCCAAAGCTTTATTTTTACTGATTATTAGAATTGGTTGTATTGACTTTTGAGTGTAGGTATATTGCCTCAGACTGTGATGCCGTGGCTACTGTTTACGAGTATCAAAAGTATGCAAAATCTGCAGAAGATGCTGTTGCTGATGTTCTTAAAGCAGGTATTTTTCTTTGTCTTTGTAAATTTGTGGTTTTGTTGAATTACTTTCCAAGATTTTATATGAATTGGATGGTTTCCAAGGTATTTTAATTCATCAATTAAATTTTAGGTATGGATATTAATTGTGGAACGTTTATGCTTCGACACACTGAATCTGCCATTGAACAAGGACTGGTGAAGGAGGAAGATTTAGATAGAGCTCTTTTCAACCTGTTCTCTGTTCAAATGCGCCTTGGACTGTTTAACGGAGATCCGAAAAAAGGCAAGTTTGGCAAATTGGGACCTCAAGATGTTTGCACACCGGAACACAAAAAATTAGCACTTGAAGCTGCAAGACAGGGGATCGTACTTCTGAAGAACGACAATAAGTTCCTTCCCTTGGATAAGAAGGATGGTGTCTCCTTAGCTATCATTGGTCCAATGGCAACTACGAGTGAATTAGGTGGCAGTTATTCAGGTATTTTTTTTCTTCATATTGGAGCATTGTAATTTGTCAATCTTCATTTAATCATTAATCATTTAATTGCCTAACGATCCTTTTCTCGTGGTACTATAGTACATTGTATTAAGTGAATCAGGGAATGTTTTCTTATGGAAATGATTGACCTAGTTTACTGATTTCCGAATTATATGCTATATCGATCACTTGAAAAATATTACCGAGCTTTGGTTTAAGTGACTGTGAGTATAGGGGAATGATTTCCCATTTGACAGAAAGGCTGCTTTCTTAAATTTCCATATCATTTGGCCATTAAGATTATTAATGTTTCCTATCTAATAATAGGAATTTCTTGCTCTCCAAGAAGCTTATATGATGGACTTAAACAATATGCAAAGACGATATCCTACGCTTTTGGTTGCCGTGATGTAAAATGTGACTCTGATGACGGTTTCGCCGAAGCTATTGACATCGCAAAGCAAACTGATTTTGTTGTAATAGTTGCCGGGCTAGATACCACACTTGAGACAGAGGATCTTGATCGAGTTAGTCTTCTTTTACCTGGTAAACAGATGGACCTTGTATCGCGTGTTGCTGCTGCTAGTAGAAGACCAGTTATTCTAGTTCTTACTGGTGGAGGACCCCTTGATGTCTCCTTCGCTGAAAATAATCAACTAATCACAAGTATTCTTTGGGTGGGGTACCCTGGTGAAGCTGGTGGAAAAGCACTAGCTGAAATCATCTTTGGAGAGTTCAATCCAGGTATGTATTTTGTTAATGAATGAATACAGTGCTCGAAAATGTTGTCTTTATACATATTAAACATCTGAAGTTGATTTTGATGCAGCTGGAAGGCTTCCGATGACTTGGTATCCCGAGTCATTTACCAATGTTCCCATGAACGACATGGGAATGCGAGCTGATCCTTCACGTGGTTATCCCGGAAGGACCTACCGTTTTTATACTGGAAGTAGAGTATATGGATTCGGGCATGGCTTAAGTTACAGTGATTTCTCATACAGGGTTTTATCAGCTCCAAGTAAACTTAGTTTGTCTACAACAACCAATGGTGGTTTGAGAAGAAGCTTATTGAACAAGGTAGAGAAAGAGGTGTTCGAAGTTGATCATGTTCACGTTGATGAGTTGCGAAATTGTAACTCATTGAGCTTCTCAATGCATATTTCTGTGATGAACGTTGGAGATTTAGATGGAAGTCACGTGGTGATGTTGTTCTCTAAATGGCCTAAAAATATACGAGGTTCACCGGAATCCCAGCTTGTCGGATTCAGTCGTCTGCATACAGTTTCTAACAAATCTATTGAAACAAGCATTTTGGTGGATCCTTGTGAACACTTCAGCTTTGCAGATGAACAAGGAAAAAGGATATTACCCTTAG
Protein sequence

>MS.gene036268.t1

MMFHQQRFTIIIFFLFSLLLIHLPKFFTTPTPSPSYPCKPPHSHYPFCNISLSISTRTTSLISLLTLSDKINQFSNNASSISHLGIPSYQWWSEALHGIATNGPGVNFNGSVKSATSFPQVIVSAAAFNRSLWFLIGYAVGVEGRAMFNVGQAGLSFWAPNVNVFRDPRWGRGQETPGEDPMVGSAYAVEFVRGIQGVEGIKNVLNDHDSDDDDGLMVSACCKHFTAYDLEKWGEFSRYNFNAVVTQQDLEDTYQPPFRGCVQQGKASCLMCSYNEVNGVPACASKDLLGLVRNKWGFEGYIASDCDAVATVYEYQKYAKSAEDAVADVLKAGMDINCGTFMLRHTESAIEQGLVKEEDLDRALFNLFSVQMRLGLFNGDPKKGKFGKLGPQDVCTPEHKKLALEAARQGIVLLKNDNKFLPLDKKDGVSLAIIGPMATTSELGGSYSGISCSPRSLYDGLKQYAKTISYAFGCRDVKCDSDDGFAEAIDIAKQTDFVVIVAGLDTTLETEDLDRVSLLLPGKQMDLVSRVAAASRRPVILVLTGGGPLDVSFAENNQLITSILWVGYPGEAGGKALAEIIFGEFNPAGRLPMTWYPESFTNVPMNDMGMRADPSRGYPGRTYRFYTGSRVYGFGHGLSYSDFSYRVLSAPSKLSLSTTTNGGLRRSLLNKVEKEVFEVDHVHVDELRNCNSLSFSMHISVMNVGDLDGSHVVMLFSKWPKNIRALQMNKEKGYYP