AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene069177

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene069177.t1 MTR_5g030860 95.034 725 30 3 1 725 1 719 0.0 1424
MS.gene069177.t1 MTR_5g062320 50.479 731 329 13 8 724 4 715 0.0 734
MS.gene069177.t1 MTR_5g062370 50.617 729 329 12 8 724 8 717 0.0 732
MS.gene069177.t1 MTR_5g062430 50.343 729 331 13 8 724 8 717 0.0 731
MS.gene069177.t1 MTR_3g074060 50.546 732 338 10 13 735 7 723 0.0 730
MS.gene069177.t1 MTR_7g109390 50.221 679 309 9 46 720 41 694 0.0 719
MS.gene069177.t1 MTR_1g087240 48.607 718 331 11 9 720 3 688 0.0 712
MS.gene069177.t1 MTR_5g062650 50.069 729 336 13 8 724 8 720 0.0 712
MS.gene069177.t1 MTR_2g034720 48.299 735 338 12 8 736 10 708 0.0 707
MS.gene069177.t1 MTR_1g106860 50.917 709 327 7 18 720 6 699 0.0 704
MS.gene069177.t1 MTR_4g094285 48.468 718 338 10 10 720 15 707 0.0 700
MS.gene069177.t1 MTR_2g008240 49.855 688 319 8 43 727 51 715 0.0 691
MS.gene069177.t1 MTR_5g062370 51.500 600 269 10 8 597 8 595 0.0 610
MS.gene069177.t1 MTR_6g028090 27.622 572 334 27 69 614 95 612 2.72e-31 130
MS.gene069177.t1 MTR_6g028120 26.195 565 351 23 69 614 76 593 1.02e-30 128
MS.gene069177.t1 MTR_6g028100 26.804 582 326 31 69 614 95 612 1.09e-29 125
MS.gene069177.t1 MTR_6g028110 26.527 573 339 30 69 614 96 613 1.51e-29 125
MS.gene069177.t1 MTR_6g028110 26.527 573 339 30 69 614 96 613 1.51e-29 125
MS.gene069177.t1 MTR_7g086030 25.260 578 340 26 69 614 71 588 3.83e-29 123
MS.gene069177.t1 MTR_7g086030 25.260 578 340 26 69 614 96 613 4.69e-29 123
MS.gene069177.t1 MTR_3g079750 25.439 570 345 25 71 614 97 612 2.26e-27 118
MS.gene069177.t1 MTR_3g462820 26.148 566 317 27 68 596 88 589 2.35e-27 118
MS.gene069177.t1 MTR_5g067010 69.444 72 22 0 647 718 2 73 1.42e-26 105
MS.gene069177.t1 MTR_2g030000 26.049 572 343 27 69 614 97 614 3.99e-26 114
MS.gene069177.t1 MTR_5g069800 25.673 557 331 29 68 596 72 573 2.00e-25 112
MS.gene069177.t1 MTR_7g086010 27.225 382 219 17 63 426 100 440 7.34e-22 100
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene069177.t1 AT5G10560 62.618 741 258 6 7 734 4 738 0.0 951
MS.gene069177.t1 AT1G78060 51.926 701 303 11 28 718 19 695 0.0 736
MS.gene069177.t1 AT3G19620 48.760 726 340 10 8 726 1 701 0.0 702
MS.gene069177.t1 AT1G02640 47.658 726 341 10 1 720 1 693 0.0 697
MS.gene069177.t1 AT5G09730 49.856 696 323 9 33 721 31 707 0.0 693
MS.gene069177.t1 AT5G64570 48.675 717 339 10 11 720 23 717 0.0 689
MS.gene069177.t1 AT5G49360 47.606 731 344 15 10 731 14 714 0.0 681
MS.gene069177.t1 AT5G64570 49.404 587 274 8 11 591 23 592 0.0 579
MS.gene069177.t1 AT5G64570 49.913 577 268 8 147 720 1 559 0.0 573
MS.gene069177.t1 AT5G09700 46.099 423 219 5 301 721 45 460 1.09e-125 385
MS.gene069177.t1 AT3G47000 27.778 576 331 29 68 614 76 595 2.29e-35 142
MS.gene069177.t1 AT3G47040 27.465 568 343 26 68 614 76 595 4.76e-32 132
MS.gene069177.t1 AT3G47010 25.391 575 346 26 68 614 77 596 2.41e-31 130
MS.gene069177.t1 AT3G47010 25.217 575 346 27 68 614 77 595 3.25e-29 124
MS.gene069177.t1 AT3G47000 30.481 374 207 17 68 425 76 412 7.18e-28 117
MS.gene069177.t1 AT3G47050 27.549 559 317 28 68 596 76 576 7.21e-28 119
MS.gene069177.t1 AT3G47040 26.307 593 343 27 68 614 76 620 1.03e-27 119
MS.gene069177.t1 AT5G04885 26.863 577 339 30 69 618 114 634 1.41e-25 113
MS.gene069177.t1 AT3G47040 30.435 368 215 16 68 425 76 412 1.45e-25 110
MS.gene069177.t1 AT5G04885 26.863 577 339 30 69 618 97 617 1.68e-25 112
MS.gene069177.t1 AT5G04885 26.863 577 339 30 69 618 97 617 1.68e-25 112
MS.gene069177.t1 AT3G62710 25.174 576 349 25 74 614 112 640 1.78e-25 112
MS.gene069177.t1 AT5G20940 25.823 577 335 27 69 614 99 613 3.63e-24 108
MS.gene069177.t1 AT3G47000 26.253 419 258 21 218 614 29 418 2.21e-23 104
MS.gene069177.t1 AT3G47010 27.873 409 222 19 68 450 77 438 2.52e-23 104
MS.gene069177.t1 AT5G20950 25.124 605 354 25 66 643 90 622 3.09e-23 105
MS.gene069177.t1 AT5G20950 25.124 605 354 25 66 643 90 622 3.09e-23 105
MS.gene069177.t1 AT5G20950 25.413 606 351 26 66 643 168 700 3.99e-23 105
MS.gene069177.t1 AT3G47010 24.272 412 274 19 218 614 29 417 3.41e-21 97.4
MS.gene069177.t1 AT3G47040 25.598 418 262 18 218 614 239 628 6.73e-21 98.2

Find 191 sgRNAs with CRISPR-Local

Find 374 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGGGGTGGTGAAGAATTT+AGG 0.153390 5.3:-19901480 None:intergenic
CGTTCTCTTTGGTTTCTTAT+TGG 0.193378 5.3:+19901798 MS.gene069177:CDS
AAAAGGCAAGTTTGGCAAAT+TGG 0.210658 5.3:+19904362 MS.gene069177:CDS
AACTAATCACAAGTATTCTT+TGG 0.231688 5.3:+19905218 MS.gene069177:CDS
TTGTGCTAGCAAGGATCTTT+TGG 0.243022 5.3:+19903848 MS.gene069177:CDS
CCAGTTATTCTAGTTCTTAC+TGG 0.258479 5.3:+19905157 MS.gene069177:CDS
TATACTGGAAGTAGAGTATA+TGG 0.259318 5.3:+19905506 MS.gene069177:CDS
CGGCATTTAACCGTTCTCTT+TGG 0.276482 5.3:+19901787 MS.gene069177:CDS
AGTCCATCATATAAGCTTCT+TGG 0.280029 5.3:-19904905 None:intergenic
GAATTAGGTGGCGGTTATTC+AGG 0.283750 5.3:+19904540 MS.gene069177:CDS
TGCTTATGATTTGGAGAAAT+GGG 0.286679 5.3:+19902088 MS.gene069177:CDS
TGTTCTTACAATGAAGTTAA+TGG 0.297890 5.3:+19903816 MS.gene069177:CDS
GGTAGGAGGGAGAAGGGGTT+GGG 0.311262 5.3:-19901497 None:intergenic
AAGACGATATCCTACGCTTT+TGG 0.325577 5.3:+19904941 MS.gene069177:CDS
CTGCTTATGATTTGGAGAAA+TGG 0.328518 5.3:+19902087 MS.gene069177:CDS
ATGGCAACTACGAGTGAATT+AGG 0.330374 5.3:+19904525 MS.gene069177:CDS
GCACTAGCTGAAATCATCTT+TGG 0.332465 5.3:+19905271 MS.gene069177:CDS
GTGGGGTACCCTGGTGAAGC+TGG 0.353051 5.3:+19905241 MS.gene069177:CDS
ATGTTTAATGTTGGACAAGC+TGG 0.356387 5.3:+19901849 MS.gene069177:CDS
AGAGAGAGATGTTGCAGAAT+GGG 0.360263 5.3:-19901545 None:intergenic
TTGCAGATGAACAAGGAAAA+AGG 0.361423 5.3:+19905906 MS.gene069177:CDS
TTGGGGTGGTGAAGAATTTA+GGG 0.362271 5.3:-19901479 None:intergenic
CCAGTAAGAACTAGAATAAC+TGG 0.363617 5.3:-19905157 None:intergenic
AAAGGCAAGTTTGGCAAATT+GGG 0.364940 5.3:+19904363 MS.gene069177:CDS
GTAGGTTACACAACAGGATT+TGG 0.386373 5.3:+19903731 MS.gene069177:intron
TGGTGATGTTGTTCTCTAAA+TGG 0.396382 5.3:+19905765 MS.gene069177:CDS
ACTAATCACAAGTATTCTTT+GGG 0.398935 5.3:+19905219 MS.gene069177:CDS
GGAAGTAGAGTATATGGATT+CGG 0.401250 5.3:+19905512 MS.gene069177:CDS
CTTCACCAGTCCTTGTTCAA+TGG 0.406189 5.3:-19904262 None:intergenic
TCGCATTCCCATGTCGTTCA+TGG 0.408950 5.3:-19905441 None:intergenic
GGTGTCTCCTTAGCTATCAT+TGG 0.411919 5.3:+19904498 MS.gene069177:CDS
TGATGATGATGATGGTCTTA+TGG 0.413199 5.3:+19902040 MS.gene069177:CDS
GTAGGAGGGAGAAGGGGTTG+GGG 0.413679 5.3:-19901496 None:intergenic
TGGTGGTTTGCATGGGTAGG+AGG 0.416917 5.3:-19901511 None:intergenic
CTTTGCGATGTCAATAGCTT+CGG 0.417359 5.3:-19905002 None:intergenic
ATGCGCCTTGGACTGTTTAA+CGG 0.422424 5.3:+19904330 MS.gene069177:CDS
GTAGACAAACTAAGTTTACT+TGG 0.424795 5.3:-19905581 None:intergenic
GGAGGGAGAAGGGGTTGGGG+TGG 0.425539 5.3:-19901493 None:intergenic
TGAGAGTGTGGTGGTTTGCA+TGG 0.426372 5.3:-19901519 None:intergenic
TTTCTTATTGGTTATGCTGT+TGG 0.428648 5.3:+19901810 MS.gene069177:CDS
GAAGTAGAGTATATGGATTC+GGG 0.429609 5.3:+19905513 MS.gene069177:CDS
GGTTATGCTGTTGGTGTTGA+AGG 0.430380 5.3:+19901819 MS.gene069177:CDS
TTCTCTGTTCAAATGCGCCT+TGG 0.433593 5.3:+19904318 MS.gene069177:CDS
ATGAACGTTGGAGATTTAGA+TGG 0.439651 5.3:+19905734 MS.gene069177:CDS
GTTCCTTCCCTTGGATAAGA+AGG 0.440509 5.3:+19904473 MS.gene069177:CDS
AAGATGCGTTGTTGGAGAAT+TGG 0.440584 5.3:-19901626 None:intergenic
TATGCTGTTGAGTTTGTTAG+AGG 0.440605 5.3:+19901969 MS.gene069177:CDS
GATGAGAGAGGTTGTTCTTG+TGG 0.440619 5.3:-19901574 None:intergenic
GGTGGTTTGCATGGGTAGGA+GGG 0.443207 5.3:-19901510 None:intergenic
AACTCCTGGGGAGGATCCTA+TGG 0.443273 5.3:+19901935 MS.gene069177:CDS
AGCACTTGAAGCTGCAAGAC+AGG 0.445314 5.3:+19904422 MS.gene069177:CDS
AGAGGGATTCAAGGTGTTGA+GGG 0.447105 5.3:+19901987 MS.gene069177:CDS
GTTACAGTGATTTCTCATAC+AGG 0.448038 5.3:+19905546 MS.gene069177:CDS
AATTCACTCGTAGTTGCCAT+TGG 0.452090 5.3:-19904522 None:intergenic
GGGTAGGAGGGAGAAGGGGT+TGG 0.453387 5.3:-19901498 None:intergenic
AGAAACAAGTGGGGATTTGA+AGG 0.453827 5.3:+19903879 MS.gene069177:CDS
ATTCTTTGGGTGGGGTACCC+TGG 0.455534 5.3:+19905232 MS.gene069177:CDS
GGAGATGGAAGATGCGTTGT+TGG 0.457611 5.3:-19901634 None:intergenic
TTAGGTATGGATATTAATTG+TGG 0.457882 5.3:+19904210 MS.gene069177:intron
GAGTTTGTTAGAGGGATTCA+AGG 0.458297 5.3:+19901978 MS.gene069177:CDS
TGCATGGGTAGGAGGGAGAA+GGG 0.458580 5.3:-19901503 None:intergenic
ATCTTTGGAGAGTTCAATCC+AGG 0.462275 5.3:+19905286 MS.gene069177:CDS
ATGCTGTTGGTGTTGAAGGT+AGG 0.463660 5.3:+19901823 MS.gene069177:CDS
CGACAATAAGTTCCTTCCCT+TGG 0.465825 5.3:+19904464 MS.gene069177:CDS
GGCGCATTTGAACAGAGAAC+AGG 0.470051 5.3:-19904314 None:intergenic
TCAGACCACCATTGGTAAGA+TGG 0.470160 5.3:-19901669 None:intergenic
GGTCCTGGTGTCAACTTCAA+TGG 0.470190 5.3:+19901717 MS.gene069177:CDS
GCTTCTTCTCAAACCACCAT+TGG 0.470519 5.3:-19905609 None:intergenic
AGAGGTTGTTCTTGTGGAGA+TGG 0.473700 5.3:-19901568 None:intergenic
GAGAGAGAGATGTTGCAGAA+TGG 0.480814 5.3:-19901546 None:intergenic
CTGGAAGGCTTCCGATGACT+TGG 0.486815 5.3:+19905393 MS.gene069177:CDS
TTGCATGGGTAGGAGGGAGA+AGG 0.489086 5.3:-19901504 None:intergenic
GAAGTTGACACCAGGACCAT+TGG 0.490541 5.3:-19901712 None:intergenic
TGCTGTTGGTGTTGAAGGTA+GGG 0.491642 5.3:+19901824 MS.gene069177:CDS
ATCACAAGTATTCTTTGGGT+GGG 0.494073 5.3:+19905223 MS.gene069177:CDS
ATTCACTCGTAGTTGCCATT+GGG 0.494772 5.3:-19904521 None:intergenic
CGCATTCCCATGTCGTTCAT+GGG 0.503462 5.3:-19905440 None:intergenic
ATTCTAGTTCTTACTGGTGG+AGG 0.503864 5.3:+19905163 MS.gene069177:CDS
GGTAGGGCTATGTTTAATGT+TGG 0.504446 5.3:+19901840 MS.gene069177:CDS
CACAACCACGAAACGGTGGC+TGG 0.507198 5.3:-19903764 None:intergenic
TGATGATGGTGAATCTTTGT+TGG 0.511693 5.3:-19901422 None:intergenic
TTTCAGCGAAGGAGACATCA+AGG 0.513259 5.3:-19905189 None:intergenic
GGGAGAGGACAGGAAACTCC+TGG 0.515936 5.3:+19901921 MS.gene069177:CDS
TAGAGGGATTCAAGGTGTTG+AGG 0.519121 5.3:+19901986 MS.gene069177:CDS
ACTTACCAGCCACCGTTTCG+TGG 0.519836 5.3:+19903759 MS.gene069177:CDS
CTCAAGTGTGGTATCTAGCC+CGG 0.520728 5.3:-19905050 None:intergenic
GGAGAGGACAGGAAACTCCT+GGG 0.520867 5.3:+19901922 MS.gene069177:CDS
GATCCTTCACGTGGTTATCC+CGG 0.520976 5.3:+19905467 MS.gene069177:CDS
TGGGATGCCAAGGTGGGAGA+TGG 0.521244 5.3:-19901649 None:intergenic
GTTGCTGATGTTCTTAAAGC+AGG 0.521708 5.3:+19904084 MS.gene069177:CDS
CTTAGCTATCATTGGCCCAA+TGG 0.522990 5.3:+19904506 MS.gene069177:CDS
GTGTGGTGGTTTGCATGGGT+AGG 0.526491 5.3:-19901514 None:intergenic
CAGCAGCAACACGCGATACA+AGG 0.527114 5.3:-19905123 None:intergenic
CAGACCACCATTGGTAAGAT+GGG 0.527606 5.3:-19901668 None:intergenic
GAGAGTGTGGTGGTTTGCAT+GGG 0.532252 5.3:-19901518 None:intergenic
GGGTACCCTGGTGAAGCTGG+TGG 0.535576 5.3:+19905244 MS.gene069177:CDS
GAACACCTCTTTCTCTACCT+TGG 0.535721 5.3:-19905639 None:intergenic
GACCATTGGTTGCAATGCCA+TGG 0.537198 5.3:-19901698 None:intergenic
ATCTGCCATTGAACAAGGAC+TGG 0.539142 5.3:+19904257 MS.gene069177:CDS
TGTTCCTGCTTGTGCTAGCA+AGG 0.540000 5.3:+19903839 MS.gene069177:CDS
GTTATTCTAGTTCTTACTGG+TGG 0.540292 5.3:+19905160 MS.gene069177:CDS
GGCATTGCAACCAATGGTCC+TGG 0.541232 5.3:+19901702 MS.gene069177:CDS
GACACCATCCTTCTTATCCA+AGG 0.542842 5.3:-19904481 None:intergenic
TCACAAGTATTCTTTGGGTG+GGG 0.544928 5.3:+19905224 MS.gene069177:CDS
GCACTTGAAGCTGCAAGACA+GGG 0.546519 5.3:+19904423 MS.gene069177:CDS
CTCCATGGCATTGCAACCAA+TGG 0.547753 5.3:+19901696 MS.gene069177:CDS
CATGTCGTTCATGGGAACAT+TGG 0.548046 5.3:-19905432 None:intergenic
CCTGGGGAGGATCCTATGGT+TGG 0.549403 5.3:+19901939 MS.gene069177:CDS
AATCACAAGTATTCTTTGGG+TGG 0.549993 5.3:+19905222 MS.gene069177:CDS
ATTGACCAAGGTAGAGAAAG+AGG 0.550057 5.3:+19905634 MS.gene069177:CDS
CAATGTTCCCATGAACGACA+TGG 0.550186 5.3:+19905433 MS.gene069177:CDS
GGAGAGCTTCAGACCACCAT+TGG 0.550580 5.3:-19901677 None:intergenic
ACAAGGTCCATCTGTTTACC+AGG 0.555020 5.3:-19905106 None:intergenic
AGAAATGGGGAGAGTTCTCT+AGG 0.555342 5.3:+19902102 MS.gene069177:CDS
CGGCGGACACAATAACTTGA+GGG 0.560003 5.3:-19901764 None:intergenic
ATGCTGTTGAGTTTGTTAGA+GGG 0.560660 5.3:+19901970 MS.gene069177:CDS
GCATCCCATCTTACCAATGG+TGG 0.561057 5.3:+19901664 MS.gene069177:CDS
CATATTTCTGTGATGAACGT+TGG 0.563427 5.3:+19905722 MS.gene069177:CDS
CTTCCCTTGGATAAGAAGGA+TGG 0.564166 5.3:+19904477 MS.gene069177:CDS
TAGGTATAATTTCAATGCTG+TGG 0.566313 5.3:+19902121 MS.gene069177:CDS
TGTTGAACACAACCACGAAA+CGG 0.566356 5.3:-19903771 None:intergenic
GATCTCCGTTAAACAGTCCA+AGG 0.566435 5.3:-19904335 None:intergenic
GAGAGGACAGGAAACTCCTG+GGG 0.569079 5.3:+19901923 MS.gene069177:CDS
AGAGTATATGGATTCGGGCA+TGG 0.569579 5.3:+19905518 MS.gene069177:CDS
GGGACTGGTTAGAAACAAGT+GGG 0.569777 5.3:+19903869 MS.gene069177:CDS
TGGGACTGGTTAGAAACAAG+TGG 0.570057 5.3:+19903868 MS.gene069177:CDS
TCCGGTGTGCAAACATCTTG+AGG 0.570428 5.3:-19904387 None:intergenic
GGGAACATTGGTAAATGACT+CGG 0.571444 5.3:-19905420 None:intergenic
AGATCCTTGCTAGCACAAGC+AGG 0.573562 5.3:-19903843 None:intergenic
CAGAATGGGTAGTGAGAGTG+TGG 0.574292 5.3:-19901531 None:intergenic
ACTGAATCTGCCATTGAACA+AGG 0.576392 5.3:+19904252 MS.gene069177:CDS
TGTTTAATGTTGGACAAGCT+GGG 0.579164 5.3:+19901850 MS.gene069177:CDS
TCTTTGTTGGTGAAACATCA+TGG 0.579528 5.3:-19901409 None:intergenic
TTTCGTGGTTGTGTTCAACA+AGG 0.579630 5.3:+19903774 MS.gene069177:CDS
GACTCGGGATACCAAGTCAT+CGG 0.583344 5.3:-19905404 None:intergenic
GCATGGGTAGGAGGGAGAAG+GGG 0.586389 5.3:-19901502 None:intergenic
GGAACATTGGTAAATGACTC+GGG 0.588973 5.3:-19905419 None:intergenic
TCTCCAAGAAGCTTATATGA+TGG 0.589597 5.3:+19904902 MS.gene069177:CDS
CATTGGGCCAATGATAGCTA+AGG 0.589961 5.3:-19904505 None:intergenic
GGTTAGGAGAGAGATGAGAG+AGG 0.592728 5.3:-19901586 None:intergenic
AGTTTGTCTACAACAACCAA+TGG 0.594296 5.3:+19905593 MS.gene069177:CDS
TTCGTGGTTGTGTTCAACAA+GGG 0.596970 5.3:+19903775 MS.gene069177:CDS
GCATCTTCCATCTCCCACCT+TGG 0.598133 5.3:+19901642 MS.gene069177:CDS
TTCAGCTTTGCAGATGAACA+AGG 0.600883 5.3:+19905899 MS.gene069177:intron
TTACAGTGATTTCTCATACA+GGG 0.601546 5.3:+19905547 MS.gene069177:CDS
CATTGAACAAGGACTGGTGA+AGG 0.602615 5.3:+19904263 MS.gene069177:CDS
TGGTGGTCTGAAGCTCTCCA+TGG 0.603445 5.3:+19901681 MS.gene069177:CDS
TGAACAAGGACTGGTGAAGG+AGG 0.606135 5.3:+19904266 MS.gene069177:CDS
TTGTCTACAACAACCAATGG+TGG 0.608237 5.3:+19905596 MS.gene069177:CDS
GAAACAAGTGGGGATTTGAA+GGG 0.608542 5.3:+19903880 MS.gene069177:CDS
TTCAGCGAAGGAGACATCAA+GGG 0.613720 5.3:-19905188 None:intergenic
GGTAAGATGGGATGCCAAGG+TGG 0.614054 5.3:-19901656 None:intergenic
TTGGCATCCCATCTTACCAA+TGG 0.616463 5.3:+19901661 MS.gene069177:CDS
GAACAAGATGAAGATGATGA+TGG 0.616481 5.3:-19901436 None:intergenic
AATGTTCCCATGAACGACAT+GGG 0.623562 5.3:+19905434 MS.gene069177:CDS
TGCCTCAGACTGTGATGCCG+TGG 0.624596 5.3:+19904014 MS.gene069177:CDS
ACACCATCCTTCTTATCCAA+GGG 0.626527 5.3:-19904480 None:intergenic
GCGGCGGACACAATAACTTG+AGG 0.629264 5.3:-19901765 None:intergenic
GCTTATGATTTGGAGAAATG+GGG 0.631102 5.3:+19902089 MS.gene069177:CDS
GGGTGGTGAAGAATTTAGGG+AGG 0.631127 5.3:-19901476 None:intergenic
ATTGGTAAGATGGGATGCCA+AGG 0.633941 5.3:-19901659 None:intergenic
AGATACCACACTTGAGACAG+AGG 0.637135 5.3:+19905057 MS.gene069177:CDS
CTTCACGTGGTTATCCCGGA+AGG 0.639197 5.3:+19905471 MS.gene069177:CDS
CAATAAGAAACCAAAGAGAA+CGG 0.640234 5.3:-19901797 None:intergenic
CACTTGAAGCTGCAAGACAG+GGG 0.640818 5.3:+19904424 MS.gene069177:CDS
GCATAAGCAGAACCAACCAT+AGG 0.641006 5.3:-19901951 None:intergenic
AGCCACGGCATCACAGTCTG+AGG 0.641121 5.3:-19904016 None:intergenic
AAGATCCTCTGTCTCAAGTG+TGG 0.641328 5.3:-19905062 None:intergenic
ACCTCAAGATGTTTGCACAC+CGG 0.641813 5.3:+19904386 MS.gene069177:CDS
CATGATAGTGATGATGATGA+TGG 0.643345 5.3:+19902032 MS.gene069177:CDS
CATCCTTCTTATCCAAGGGA+AGG 0.643414 5.3:-19904476 None:intergenic
GTAAGATGGGATGCCAAGGT+GGG 0.645774 5.3:-19901655 None:intergenic
AAGAGAACGGTTAAATGCCG+CGG 0.659391 5.3:-19901784 None:intergenic
ACTACGAGTGAATTAGGTGG+CGG 0.661317 5.3:+19904531 MS.gene069177:CDS
CTTCCGGGATAACCACGTGA+AGG 0.662517 5.3:-19905470 None:intergenic
TCAGCGAAGGAGACATCAAG+GGG 0.662692 5.3:-19905187 None:intergenic
GAGAAGAAGCTTATTGACCA+AGG 0.663758 5.3:+19905622 MS.gene069177:CDS
AGGACAGGAAACTCCTGGGG+AGG 0.676521 5.3:+19901926 MS.gene069177:CDS
CCAACCATAGGATCCTCCCC+AGG 0.676971 5.3:-19901939 None:intergenic
GATCCATTGAAGTTGACACC+AGG 0.677018 5.3:-19901720 None:intergenic
GTAAAATGTGACTCTGATGA+CGG 0.677311 5.3:+19904974 MS.gene069177:CDS
AATGGGTAGTGAGAGTGTGG+TGG 0.679539 5.3:-19901528 None:intergenic
ATACTCGTAAACAGTAGCCA+CGG 0.681138 5.3:-19904031 None:intergenic
TCAAGTTATTGTGTCCGCCG+CGG 0.685002 5.3:+19901767 MS.gene069177:CDS
TGAACACAACCACGAAACGG+TGG 0.689577 5.3:-19903768 None:intergenic
ATCACGGCAACCAAAAGCGT+AGG 0.692115 5.3:-19904951 None:intergenic
GGACTGGTTAGAAACAAGTG+GGG 0.700358 5.3:+19903870 MS.gene069177:CDS
AGATTTAGATGGAAGTCACG+TGG 0.702607 5.3:+19905745 MS.gene069177:CDS
ATGCGAGCTGATCCTTCACG+TGG 0.711213 5.3:+19905458 MS.gene069177:CDS
AGAACGGTTAAATGCCGCGG+CGG 0.720662 5.3:-19901781 None:intergenic
GCAACTACGAGTGAATTAGG+TGG 0.722972 5.3:+19904528 MS.gene069177:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTCATCAATTAAATTTT+AGG + chr5.3:19904192-19904211 MS.gene069177:intron 10.0%
!! ATTATTACTATGTTTGAATA+TGG + chr5.3:19903687-19903706 MS.gene069177:intron 15.0%
!!! TTTTTACTGATTATTAGAAT+TGG + chr5.3:19903963-19903982 MS.gene069177:intron 15.0%
!! AAATTCCTACATTATTAGAT+AGG - chr5.3:19904877-19904896 None:intergenic 20.0%
!! AATAAGCTAAAAACAACATA+TGG + chr5.3:19903321-19903340 MS.gene069177:intron 20.0%
!! AATCAGTAAAAATAAAGCTT+TGG - chr5.3:19903955-19903974 None:intergenic 20.0%
!! ATCCAATTCATATAAAATCT+TGG - chr5.3:19904156-19904175 None:intergenic 20.0%
!! ATTGATGAATTAAAATACCT+TGG - chr5.3:19904184-19904203 None:intergenic 20.0%
!! ATTGCATTCAATACTAAATT+AGG + chr5.3:19903166-19903185 MS.gene069177:intron 20.0%
!! GGAAACATTAATAATCTTAA+TGG - chr5.3:19904856-19904875 None:intergenic 20.0%
!! TCTTAAATTTCCATATCATT+TGG + chr5.3:19904830-19904849 MS.gene069177:intron 20.0%
!!! AAGATTTTATATGAATTGGA+TGG + chr5.3:19904155-19904174 MS.gene069177:intron 20.0%
!!! ATAAGTATGAGTTTTGTTTT+TGG + chr5.3:19903546-19903565 MS.gene069177:intron 20.0%
!!! CATCAATTAAATTTTAGGTA+TGG + chr5.3:19904197-19904216 MS.gene069177:intron 20.0%
!!! GGTATTTTTTTTCTTCATAT+TGG + chr5.3:19904561-19904580 MS.gene069177:intron 20.0%
!!! TAAGTATGAGTTTTGTTTTT+GGG + chr5.3:19903547-19903566 MS.gene069177:intron 20.0%
!!! TTCCAAGATTTTATATGAAT+TGG + chr5.3:19904151-19904170 MS.gene069177:intron 20.0%
!!! TTTGTGATTTTTGTTGATAA+CGG + chr5.3:19902928-19902947 MS.gene069177:intron 20.0%
! AAAAGATTCTATAAATGCTG+GGG - chr5.3:19902799-19902818 None:intergenic 25.0%
! AACTAATCACAAGTATTCTT+TGG + chr5.3:19905218-19905237 MS.gene069177:CDS 25.0%
! ACATTGTATTAAGTGAATCA+GGG + chr5.3:19904662-19904681 MS.gene069177:intron 25.0%
! ACTAATCACAAGTATTCTTT+GGG + chr5.3:19905219-19905238 MS.gene069177:CDS 25.0%
! ATAGAAGTGATTTCTCTATT+TGG - chr5.3:19903432-19903451 None:intergenic 25.0%
! ATCAAATAAGTCAATCCAAA+AGG + chr5.3:19902401-19902420 MS.gene069177:intron 25.0%
! ATCAATATTGATCATCAGTA+TGG - chr5.3:19902907-19902926 None:intergenic 25.0%
! CAAAAGATTCTATAAATGCT+GGG - chr5.3:19902800-19902819 None:intergenic 25.0%
! GATCGATATAGCATATAATT+CGG - chr5.3:19904729-19904748 None:intergenic 25.0%
! TACATTGTATTAAGTGAATC+AGG + chr5.3:19904661-19904680 MS.gene069177:intron 25.0%
! TCAAAAGATTCTATAAATGC+TGG - chr5.3:19902801-19902820 None:intergenic 25.0%
! TCAAATAAGTCAATCCAAAA+GGG + chr5.3:19902402-19902421 MS.gene069177:intron 25.0%
! TCATTAACAAAATACATACC+TGG - chr5.3:19905307-19905326 None:intergenic 25.0%
! TCCCTAAAAACATTAACATT+CGG - chr5.3:19901891-19901910 None:intergenic 25.0%
! TCTCTTACATGTTATATTCT+TGG + chr5.3:19903064-19903083 MS.gene069177:intron 25.0%
! TCTTTGTCTTTGTAAATTTG+TGG + chr5.3:19904113-19904132 MS.gene069177:intron 25.0%
! TGTTCTTACAATGAAGTTAA+TGG + chr5.3:19903816-19903835 MS.gene069177:CDS 25.0%
! TGTTTCCTATCTAATAATGT+AGG + chr5.3:19904869-19904888 MS.gene069177:intron 25.0%
! TTAGGTATGGATATTAATTG+TGG + chr5.3:19904210-19904229 MS.gene069177:intron 25.0%
!! ACATTTTACTGCTTATGATT+TGG + chr5.3:19902079-19902098 MS.gene069177:CDS 25.0%
!! ATCTATTGAAACAAGCATTT+TGG + chr5.3:19905859-19905878 MS.gene069177:intron 25.0%
!! TTAAGTTGTTTATCCAAACA+TGG - chr5.3:19902185-19902204 None:intergenic 25.0%
!! TTGGGATTTCAAAAGTTTTA+AGG + chr5.3:19903023-19903042 MS.gene069177:intron 25.0%
!!! AAGTATGAGTTTTGTTTTTG+GGG + chr5.3:19903548-19903567 MS.gene069177:intron 25.0%
!!! AGTATTGAATGCAATGTTTT+GGG - chr5.3:19903161-19903180 None:intergenic 25.0%
!!! CTTTACATGTTTTGGTAAAT+TGG + chr5.3:19903491-19903510 MS.gene069177:intron 25.0%
!!! CTTTAGCTTATCTTTTGTTA+AGG - chr5.3:19902251-19902270 None:intergenic 25.0%
!!! TAGCTGAATTTAATTTTGCT+AGG + chr5.3:19903609-19903628 MS.gene069177:intron 25.0%
!!! TAGTATTGAATGCAATGTTT+TGG - chr5.3:19903162-19903181 None:intergenic 25.0%
!!! TCCGAATGTTAATGTTTTTA+GGG + chr5.3:19901887-19901906 MS.gene069177:CDS 25.0%
AAATCCCAACTATAGATTTG+GGG - chr5.3:19903012-19903031 None:intergenic 30.0%
AAATGGCCTAAAAATATACG+AGG + chr5.3:19905782-19905801 MS.gene069177:CDS 30.0%
AATTCGGAAATCAGTAAACT+AGG - chr5.3:19904713-19904732 None:intergenic 30.0%
AGAGCTTAACTATTAGCATA+AGG - chr5.3:19903395-19903414 None:intergenic 30.0%
AGATATTAGAGAAAGATCTG+CGG - chr5.3:19902517-19902536 None:intergenic 30.0%
ATCTTAATGGCCAAATGATA+TGG - chr5.3:19904843-19904862 None:intergenic 30.0%
CAATAAGAAACCAAAGAGAA+CGG - chr5.3:19901800-19901819 None:intergenic 30.0%
CATGTAAGAGATAACTCAAA+CGG - chr5.3:19903055-19903074 None:intergenic 30.0%
CTCTACTTCCAGTATAAAAA+CGG - chr5.3:19905502-19905521 None:intergenic 30.0%
CTTACATGTTATATTCTTGG+TGG + chr5.3:19903067-19903086 MS.gene069177:intron 30.0%
GAAATCCCAACTATAGATTT+GGG - chr5.3:19903013-19903032 None:intergenic 30.0%
GTAGACAAACTAAGTTTACT+TGG - chr5.3:19905584-19905603 None:intergenic 30.0%
TAAAAATATACGAGGTTCAC+CGG + chr5.3:19905790-19905809 MS.gene069177:intron 30.0%
TAGGTATAATTTCAATGCTG+TGG + chr5.3:19902121-19902140 MS.gene069177:CDS 30.0%
TATACTGGAAGTAGAGTATA+TGG + chr5.3:19905506-19905525 MS.gene069177:CDS 30.0%
TCAATACTAAATTAGGTGAG+TGG + chr5.3:19903173-19903192 MS.gene069177:intron 30.0%
TGAAAAATATTACCGAGCTT+TGG + chr5.3:19904752-19904771 MS.gene069177:intron 30.0%
TGAAATCCCAACTATAGATT+TGG - chr5.3:19903014-19903033 None:intergenic 30.0%
TTACAGTGATTTCTCATACA+GGG + chr5.3:19905547-19905566 MS.gene069177:CDS 30.0%
TTTAAGTGACTGTGAGTATA+GGG + chr5.3:19904775-19904794 MS.gene069177:intron 30.0%
! AATCAGGGAATGTTTTCTTA+TGG + chr5.3:19904677-19904696 MS.gene069177:intron 30.0%
! CTCCGAATGTTAATGTTTTT+AGG + chr5.3:19901886-19901905 MS.gene069177:CDS 30.0%
! TAGTTGATTATTTTCAGCGA+AGG - chr5.3:19905203-19905222 None:intergenic 30.0%
! TATTGAAACAAGCATTTTGG+TGG + chr5.3:19905862-19905881 MS.gene069177:intron 30.0%
! TGCTTATGATTTGGAGAAAT+GGG + chr5.3:19902088-19902107 MS.gene069177:CDS 30.0%
! TGTTTTCGTATAAGCTATCA+TGG + chr5.3:19902277-19902296 MS.gene069177:intron 30.0%
! TTTCTTATTGGTTATGCTGT+TGG + chr5.3:19901810-19901829 MS.gene069177:CDS 30.0%
!! ATTTTGTTGTAATAGTTGCC+GGG + chr5.3:19905032-19905051 MS.gene069177:CDS 30.0%
!! GATTTTGTTGTAATAGTTGC+CGG + chr5.3:19905031-19905050 MS.gene069177:CDS 30.0%
!! GGTTATTTTGTCAAAGATGA+CGG - chr5.3:19902698-19902717 None:intergenic 30.0%
!!! AACGGTCATACTGATTTTTA+AGG + chr5.3:19902856-19902875 MS.gene069177:intron 30.0%
!!! ACGGTCATACTGATTTTTAA+GGG + chr5.3:19902857-19902876 MS.gene069177:intron 30.0%
!!! AGTATGAGTTTTGTTTTTGG+GGG + chr5.3:19903549-19903568 MS.gene069177:intron 30.0%
!!! AGTGCTAATTTTTTGTGTTC+CGG - chr5.3:19904408-19904427 None:intergenic 30.0%
!!! TTAATGTTTTTAGGGATCCT+AGG + chr5.3:19901895-19901914 MS.gene069177:CDS 30.0%
!!! TTGTATTGACTTTTGAGTGT+AGG + chr5.3:19903986-19904005 MS.gene069177:intron 30.0%
AAAAGGCAAGTTTGGCAAAT+TGG + chr5.3:19904362-19904381 MS.gene069177:CDS 35.0%
AAAGGCAAGTTTGGCAAATT+GGG + chr5.3:19904363-19904382 MS.gene069177:CDS 35.0%
AATCACAAGTATTCTTTGGG+TGG + chr5.3:19905222-19905241 MS.gene069177:CDS 35.0%
AATCCCAACTATAGATTTGG+GGG - chr5.3:19903011-19903030 None:intergenic 35.0%
ACTTCCAGTATAAAAACGGT+AGG - chr5.3:19905498-19905517 None:intergenic 35.0%
AGTCCATCATATAAGCTTCT+TGG - chr5.3:19904908-19904927 None:intergenic 35.0%
AGTTTGTCTACAACAACCAA+TGG + chr5.3:19905593-19905612 MS.gene069177:CDS 35.0%
ATACTAAATTAGGTGAGTGG+CGG + chr5.3:19903176-19903195 MS.gene069177:intron 35.0%
ATCACAAGTATTCTTTGGGT+GGG + chr5.3:19905223-19905242 MS.gene069177:CDS 35.0%
ATGAACGTTGGAGATTTAGA+TGG + chr5.3:19905734-19905753 MS.gene069177:CDS 35.0%
ATGTTTAATGTTGGACAAGC+TGG + chr5.3:19901849-19901868 MS.gene069177:CDS 35.0%
ATTCTTCATTACACGAACGA+GGG + chr5.3:19902592-19902611 MS.gene069177:intron 35.0%
CAATCCAAAAGGGAGTTATA+AGG + chr5.3:19902412-19902431 MS.gene069177:intron 35.0%
CCAGTAAGAACTAGAATAAC+TGG - chr5.3:19905160-19905179 None:intergenic 35.0%
GAACAAGATGAAGATGATGA+TGG - chr5.3:19901439-19901458 None:intergenic 35.0%
GAAGTAGAGTATATGGATTC+GGG + chr5.3:19905513-19905532 MS.gene069177:CDS 35.0%
GGAAGTAGAGTATATGGATT+CGG + chr5.3:19905512-19905531 MS.gene069177:CDS 35.0%
GTAAAATGTGACTCTGATGA+CGG + chr5.3:19904974-19904993 MS.gene069177:CDS 35.0%
GTTACAGTGATTTCTCATAC+AGG + chr5.3:19905546-19905565 MS.gene069177:CDS 35.0%
GTTTAAGTGACTGTGAGTAT+AGG + chr5.3:19904774-19904793 MS.gene069177:intron 35.0%
GTTTATCCAAACATGGTCAA+AGG - chr5.3:19902178-19902197 None:intergenic 35.0%
TACCTCTACAGTGTTATCAA+GGG + chr5.3:19903127-19903146 MS.gene069177:intron 35.0%
TACTATAGTACCACGAGAAA+AGG - chr5.3:19904643-19904662 None:intergenic 35.0%
TACTCCAAAAGGGAGTTATA+AGG + chr5.3:19903264-19903283 MS.gene069177:intron 35.0%
TATGAATTGGATGGTTTCCA+AGG + chr5.3:19904164-19904183 MS.gene069177:intron 35.0%
TCAAACAGTAGATAAGATGC+TGG + chr5.3:19902370-19902389 MS.gene069177:intron 35.0%
TCTCCAAGAAGCTTATATGA+TGG + chr5.3:19904902-19904921 MS.gene069177:CDS 35.0%
TGATTTCCCATTTGACAGAA+AGG + chr5.3:19904801-19904820 MS.gene069177:intron 35.0%
TGCTGGATTGAGTATTTCAA+CGG + chr5.3:19902838-19902857 MS.gene069177:intron 35.0%
TGTTTAATGTTGGACAAGCT+GGG + chr5.3:19901850-19901869 MS.gene069177:CDS 35.0%
TTAAGTGACTGTGAGTATAG+GGG + chr5.3:19904776-19904795 MS.gene069177:intron 35.0%
TTACCTCTACAGTGTTATCA+AGG + chr5.3:19903126-19903145 MS.gene069177:intron 35.0%
TTGCAGATGAACAAGGAAAA+AGG + chr5.3:19905906-19905925 MS.gene069177:CDS 35.0%
TTTAACGGAGATCCGAAAAA+AGG + chr5.3:19904345-19904364 MS.gene069177:CDS 35.0%
! AATATGGTGTTGAGTGCAAT+AGG + chr5.3:19903703-19903722 MS.gene069177:intron 35.0%
! CAGAGTCACATTTTACATCA+CGG - chr5.3:19904970-19904989 None:intergenic 35.0%
! CATATTTCTGTGATGAACGT+TGG + chr5.3:19905722-19905741 MS.gene069177:CDS 35.0%
! CATGATAGTGATGATGATGA+TGG + chr5.3:19902032-19902051 MS.gene069177:CDS 35.0%
! CGTTCTCTTTGGTTTCTTAT+TGG + chr5.3:19901798-19901817 MS.gene069177:CDS 35.0%
! CTGCTTATGATTTGGAGAAA+TGG + chr5.3:19902087-19902106 MS.gene069177:CDS 35.0%
! GCTTATGATTTGGAGAAATG+GGG + chr5.3:19902089-19902108 MS.gene069177:CDS 35.0%
! GGTGAACCTCGTATATTTTT+AGG - chr5.3:19905791-19905810 None:intergenic 35.0%
! GTTTTTGTAGGTTACACAAC+AGG + chr5.3:19903725-19903744 MS.gene069177:intron 35.0%
! TCAACCTTATAACTCCCTTT+TGG - chr5.3:19903271-19903290 None:intergenic 35.0%
! TCAGTAATTTTGTCATCACG+AGG - chr5.3:19903215-19903234 None:intergenic 35.0%
! TCTTTTACCTGGTAAACAGA+TGG + chr5.3:19905099-19905118 MS.gene069177:CDS 35.0%
! TGAGTGCAATAGGTTTTTGT+AGG + chr5.3:19903713-19903732 MS.gene069177:intron 35.0%
! TGGTGATGTTGTTCTCTAAA+TGG + chr5.3:19905765-19905784 MS.gene069177:CDS 35.0%
! TGTCTGTGCTTTACATGTTT+TGG + chr5.3:19903483-19903502 MS.gene069177:intron 35.0%
!! ATGCTGTTGAGTTTGTTAGA+GGG + chr5.3:19901970-19901989 MS.gene069177:CDS 35.0%
!! CCAGTTATTCTAGTTCTTAC+TGG + chr5.3:19905157-19905176 MS.gene069177:CDS 35.0%
!! GGAGAATTGGTTGATTTTGT+CGG - chr5.3:19901616-19901635 None:intergenic 35.0%
!! GTTATTCTAGTTCTTACTGG+TGG + chr5.3:19905160-19905179 MS.gene069177:CDS 35.0%
!! TATGCTGTTGAGTTTGTTAG+AGG + chr5.3:19901969-19901988 MS.gene069177:CDS 35.0%
!! TGATGATGATGATGGTCTTA+TGG + chr5.3:19902040-19902059 MS.gene069177:CDS 35.0%
!! TGATGATGGTGAATCTTTGT+TGG - chr5.3:19901425-19901444 None:intergenic 35.0%
!!! TTGCCAAACTTGCCTTTTTT+CGG - chr5.3:19904360-19904379 None:intergenic 35.0%
AAAGCAGCCTTTCTGTCAAA+TGG - chr5.3:19904811-19904830 None:intergenic 40.0%
AACATGTAAAGCACAGACAC+TGG - chr5.3:19903482-19903501 None:intergenic 40.0%
AAGATGCGTTGTTGGAGAAT+TGG - chr5.3:19901629-19901648 None:intergenic 40.0%
AAGCAGCCTTTCTGTCAAAT+GGG - chr5.3:19904810-19904829 None:intergenic 40.0%
AATGTTCCCATGAACGACAT+GGG + chr5.3:19905434-19905453 MS.gene069177:CDS 40.0%
AATTCACTCGTAGTTGCCAT+TGG - chr5.3:19904525-19904544 None:intergenic 40.0%
ACACCATCCTTCTTATCCAA+GGG - chr5.3:19904483-19904502 None:intergenic 40.0%
ACTATAGATTTGGGGGATCT+CGG - chr5.3:19903004-19903023 None:intergenic 40.0%
ACTGAATCTGCCATTGAACA+AGG + chr5.3:19904252-19904271 MS.gene069177:CDS 40.0%
AGAAACAAGTGGGGATTTGA+AGG + chr5.3:19903879-19903898 MS.gene069177:CDS 40.0%
AGAGAGAGATGTTGCAGAAT+GGG - chr5.3:19901548-19901567 None:intergenic 40.0%
AGATCCCCCAAATCTATAGT+TGG + chr5.3:19903004-19903023 MS.gene069177:intron 40.0%
AGATTTAGATGGAAGTCACG+TGG + chr5.3:19905745-19905764 MS.gene069177:CDS 40.0%
AGGGAGTTATAAGGTTGACT+TGG + chr5.3:19903273-19903292 MS.gene069177:intron 40.0%
ATAAAAACGGTAGGTCCTTC+CGG - chr5.3:19905489-19905508 None:intergenic 40.0%
ATACTCGTAAACAGTAGCCA+CGG - chr5.3:19904034-19904053 None:intergenic 40.0%
ATGCTGGGGTTATTGTTCTA+AGG - chr5.3:19902785-19902804 None:intergenic 40.0%
ATGGCAACTACGAGTGAATT+AGG + chr5.3:19904525-19904544 MS.gene069177:CDS 40.0%
ATTCACTCGTAGTTGCCATT+GGG - chr5.3:19904524-19904543 None:intergenic 40.0%
ATTGACCAAGGTAGAGAAAG+AGG + chr5.3:19905634-19905653 MS.gene069177:CDS 40.0%
ATTTGAAGGGTAAGGGTTTG+AGG + chr5.3:19903893-19903912 MS.gene069177:intron 40.0%
CAGTCACTTAAACCAAAGCT+CGG - chr5.3:19904767-19904786 None:intergenic 40.0%
CATTCTTCATTACACGAACG+AGG + chr5.3:19902591-19902610 MS.gene069177:intron 40.0%
CCAAAAGGGAGTTATAAGGT+TGG + chr5.3:19902416-19902435 MS.gene069177:intron 40.0%
CTGTCGACATTACTCCAAAA+GGG + chr5.3:19903254-19903273 MS.gene069177:intron 40.0%
CTTTGCGATGTCAATAGCTT+CGG - chr5.3:19905005-19905024 None:intergenic 40.0%
GAAACAAGTGGGGATTTGAA+GGG + chr5.3:19903880-19903899 MS.gene069177:CDS 40.0%
GAGAAGAAGCTTATTGACCA+AGG + chr5.3:19905622-19905641 MS.gene069177:CDS 40.0%
GATCCCCCAAATCTATAGTT+GGG + chr5.3:19903005-19903024 MS.gene069177:intron 40.0%
GATCCGAAAAAAGGCAAGTT+TGG + chr5.3:19904354-19904373 MS.gene069177:CDS 40.0%
GCACTAGCTGAAATCATCTT+TGG + chr5.3:19905271-19905290 MS.gene069177:CDS 40.0%
GGAACATTGGTAAATGACTC+GGG - chr5.3:19905422-19905441 None:intergenic 40.0%
GGGAACATTGGTAAATGACT+CGG - chr5.3:19905423-19905442 None:intergenic 40.0%
GGTAGGGCTATGTTTAATGT+TGG + chr5.3:19901840-19901859 MS.gene069177:CDS 40.0%
GTAGGTTACACAACAGGATT+TGG + chr5.3:19903731-19903750 MS.gene069177:intron 40.0%
GTTGCTGATGTTCTTAAAGC+AGG + chr5.3:19904084-19904103 MS.gene069177:CDS 40.0%
TAGCAACTTATCAGCTTCGT+CGG + chr5.3:19902636-19902655 MS.gene069177:intron 40.0%
TCACAAGTATTCTTTGGGTG+GGG + chr5.3:19905224-19905243 MS.gene069177:CDS 40.0%
TCTACAGTGTTATCAAGGGT+AGG + chr5.3:19903131-19903150 MS.gene069177:intron 40.0%
TCTGTCGACATTACTCCAAA+AGG + chr5.3:19903253-19903272 MS.gene069177:intron 40.0%
TGCTGGGGTTATTGTTCTAA+GGG - chr5.3:19902784-19902803 None:intergenic 40.0%
TGTTGAACACAACCACGAAA+CGG - chr5.3:19903774-19903793 None:intergenic 40.0%
TTCAGCTTTGCAGATGAACA+AGG + chr5.3:19905899-19905918 MS.gene069177:intron 40.0%
TTCGTGGTTGTGTTCAACAA+GGG + chr5.3:19903775-19903794 MS.gene069177:CDS 40.0%
TTGGGGTGGTGAAGAATTTA+GGG - chr5.3:19901482-19901501 None:intergenic 40.0%
TTGTCTACAACAACCAATGG+TGG + chr5.3:19905596-19905615 MS.gene069177:CDS 40.0%
TTTCGTGGTTGTGTTCAACA+AGG + chr5.3:19903774-19903793 MS.gene069177:CDS 40.0%
TTTGAGCCTTTGACCATGTT+TGG + chr5.3:19902169-19902188 MS.gene069177:intron 40.0%
! AAGACGATATCCTACGCTTT+TGG + chr5.3:19904941-19904960 MS.gene069177:CDS 40.0%
! ATCTTTGGAGAGTTCAATCC+AGG + chr5.3:19905286-19905305 MS.gene069177:CDS 40.0%
! CCAACCTTATAACTCCCTTT+TGG - chr5.3:19902419-19902438 None:intergenic 40.0%
! TACCCTTGATAACACTGTAG+AGG - chr5.3:19903132-19903151 None:intergenic 40.0%
! TGTGCTAGCAAGGATCTTTT+GGG + chr5.3:19903849-19903868 MS.gene069177:CDS 40.0%
! TTGTGCTAGCAAGGATCTTT+TGG + chr5.3:19903848-19903867 MS.gene069177:CDS 40.0%
!! ACAAGCTGGGTTGAGTTTTT+GGG + chr5.3:19901863-19901882 MS.gene069177:CDS 40.0%
!! AGGACCTACCGTTTTTATAC+TGG + chr5.3:19905491-19905510 MS.gene069177:CDS 40.0%
!! ATTCTAGTTCTTACTGGTGG+AGG + chr5.3:19905163-19905182 MS.gene069177:CDS 40.0%
!! ATTGGTTGATTTTGTCGGAG+AGG - chr5.3:19901611-19901630 None:intergenic 40.0%
!! GAAGTTGATTTTGATGCAGC+TGG + chr5.3:19905374-19905393 MS.gene069177:intron 40.0%
!! GAGTTATAAGGTTGACTTGG+TGG + chr5.3:19903276-19903295 MS.gene069177:intron 40.0%
!! GAGTTTGTTAGAGGGATTCA+AGG + chr5.3:19901978-19901997 MS.gene069177:CDS 40.0%
!! TTGATTTTGATGCAGCTGGA+AGG + chr5.3:19905378-19905397 MS.gene069177:intron 40.0%
!! TTGGTTGATTTTGTCGGAGA+GGG - chr5.3:19901610-19901629 None:intergenic 40.0%
!!! ATGTTTTTAGGGATCCTAGG+TGG + chr5.3:19901898-19901917 MS.gene069177:CDS 40.0%
!!! CGAGTTAGTCTTCTTTTACC+TGG + chr5.3:19905088-19905107 MS.gene069177:CDS 40.0%
!!! GAGTTTTGTTTTTGGGGGAT+TGG + chr5.3:19903554-19903573 MS.gene069177:intron 40.0%
!!! TGTTTTTAGGGATCCTAGGT+GGG + chr5.3:19901899-19901918 MS.gene069177:CDS 40.0%
!!! TTTTGGAGTAATGTCGACAG+AGG - chr5.3:19903254-19903273 None:intergenic 40.0%
AACTTATCAGCTTCGTCGGT+GGG + chr5.3:19902640-19902659 MS.gene069177:intron 45.0%
AAGAGAACGGTTAAATGCCG+CGG - chr5.3:19901787-19901806 None:intergenic 45.0%
AAGATCCTCTGTCTCAAGTG+TGG - chr5.3:19905065-19905084 None:intergenic 45.0%
AAGGGAGTTATAAGGTTGGC+TGG + chr5.3:19902420-19902439 MS.gene069177:intron 45.0%
AAGTGGGGATTTGAAGGGTA+AGG + chr5.3:19903885-19903904 MS.gene069177:intron 45.0%
ACAAGGTCCATCTGTTTACC+AGG - chr5.3:19905109-19905128 None:intergenic 45.0%
ACCACGAGAAAAGGATCGTT+AGG - chr5.3:19904634-19904653 None:intergenic 45.0%
ACCTCAAGATGTTTGCACAC+CGG + chr5.3:19904386-19904405 MS.gene069177:CDS 45.0%
ACGGTCACAAACGATGTTCT+TGG - chr5.3:19902679-19902698 None:intergenic 45.0%
ACTACGAGTGAATTAGGTGG+CGG + chr5.3:19904531-19904550 MS.gene069177:CDS 45.0%
AGAAATGGGGAGAGTTCTCT+AGG + chr5.3:19902102-19902121 MS.gene069177:CDS 45.0%
AGAGGTTGTTCTTGTGGAGA+TGG - chr5.3:19901571-19901590 None:intergenic 45.0%
AGAGTATATGGATTCGGGCA+TGG + chr5.3:19905518-19905537 MS.gene069177:CDS 45.0%
AGATACCACACTTGAGACAG+AGG + chr5.3:19905057-19905076 MS.gene069177:CDS 45.0%
AGTGGGGATTTGAAGGGTAA+GGG + chr5.3:19903886-19903905 MS.gene069177:intron 45.0%
ATCATCAGTATGGCGTTCTG+CGG - chr5.3:19902897-19902916 None:intergenic 45.0%
ATCTGCCATTGAACAAGGAC+TGG + chr5.3:19904257-19904276 MS.gene069177:CDS 45.0%
ATGCGCCTTGGACTGTTTAA+CGG + chr5.3:19904330-19904349 MS.gene069177:CDS 45.0%
ATGTCGACAGAGGTTTGACT+AGG - chr5.3:19903244-19903263 None:intergenic 45.0%
ATTGGTAAGATGGGATGCCA+AGG - chr5.3:19901662-19901681 None:intergenic 45.0%
CAATGTTCCCATGAACGACA+TGG + chr5.3:19905433-19905452 MS.gene069177:CDS 45.0%
CAGACCACCATTGGTAAGAT+GGG - chr5.3:19901671-19901690 None:intergenic 45.0%
CATCCTTCTTATCCAAGGGA+AGG - chr5.3:19904479-19904498 None:intergenic 45.0%
CATGTCGTTCATGGGAACAT+TGG - chr5.3:19905435-19905454 None:intergenic 45.0%
CATTGGGCCAATGATAGCTA+AGG - chr5.3:19904508-19904527 None:intergenic 45.0%
CGACAATAAGTTCCTTCCCT+TGG + chr5.3:19904464-19904483 MS.gene069177:CDS 45.0%
CGGCATTTAACCGTTCTCTT+TGG + chr5.3:19901787-19901806 MS.gene069177:CDS 45.0%
CTTAGCTATCATTGGCCCAA+TGG + chr5.3:19904506-19904525 MS.gene069177:CDS 45.0%
CTTCACCAGTCCTTGTTCAA+TGG - chr5.3:19904265-19904284 None:intergenic 45.0%
CTTCCCTTGGATAAGAAGGA+TGG + chr5.3:19904477-19904496 MS.gene069177:CDS 45.0%
GAACACCTCTTTCTCTACCT+TGG - chr5.3:19905642-19905661 None:intergenic 45.0%
GACACCATCCTTCTTATCCA+AGG - chr5.3:19904484-19904503 None:intergenic 45.0%
GAGAGAGAGATGTTGCAGAA+TGG - chr5.3:19901549-19901568 None:intergenic 45.0%
GATCCATTGAAGTTGACACC+AGG - chr5.3:19901723-19901742 None:intergenic 45.0%
GATCTCCGTTAAACAGTCCA+AGG - chr5.3:19904338-19904357 None:intergenic 45.0%
GATGAGAGAGGTTGTTCTTG+TGG - chr5.3:19901577-19901596 None:intergenic 45.0%
GCAACTACGAGTGAATTAGG+TGG + chr5.3:19904528-19904547 MS.gene069177:CDS 45.0%
GCATAAGCAGAACCAACCAT+AGG - chr5.3:19901954-19901973 None:intergenic 45.0%
GCTTCTTCTCAAACCACCAT+TGG - chr5.3:19905612-19905631 None:intergenic 45.0%
GGTGTCTCCTTAGCTATCAT+TGG + chr5.3:19904498-19904517 MS.gene069177:CDS 45.0%
GTTCCTTCCCTTGGATAAGA+AGG + chr5.3:19904473-19904492 MS.gene069177:CDS 45.0%
GTTGGGGTGGTGAAGAATTT+AGG - chr5.3:19901483-19901502 None:intergenic 45.0%
TAAAAACGGTAGGTCCTTCC+GGG - chr5.3:19905488-19905507 None:intergenic 45.0%
TCAGACCACCATTGGTAAGA+TGG - chr5.3:19901672-19901691 None:intergenic 45.0%
TGTCGACAGAGGTTTGACTA+GGG - chr5.3:19903243-19903262 None:intergenic 45.0%
TTCAGCGAAGGAGACATCAA+GGG - chr5.3:19905191-19905210 None:intergenic 45.0%
TTCTCTGTTCAAATGCGCCT+TGG + chr5.3:19904318-19904337 MS.gene069177:CDS 45.0%
TTGAGCATCTGTTTCAGCCT+AGG + chr5.3:19902969-19902988 MS.gene069177:intron 45.0%
TTGGCATCCCATCTTACCAA+TGG + chr5.3:19901661-19901680 MS.gene069177:CDS 45.0%
TTTCAGCGAAGGAGACATCA+AGG - chr5.3:19905192-19905211 None:intergenic 45.0%
! AGGGAGTTATAAGGTTGGCT+GGG + chr5.3:19902421-19902440 MS.gene069177:intron 45.0%
! CATTGAACAAGGACTGGTGA+AGG + chr5.3:19904263-19904282 MS.gene069177:CDS 45.0%
! GAATTAGGTGGCGGTTATTC+AGG + chr5.3:19904540-19904559 MS.gene069177:CDS 45.0%
! GCAAAGCTGAAGTGTTCACA+AGG - chr5.3:19905890-19905909 None:intergenic 45.0%
! TGATTTTGTCGGAGAGGGTT+AGG - chr5.3:19901605-19901624 None:intergenic 45.0%
!! AGAGGGATTCAAGGTGTTGA+GGG + chr5.3:19901987-19902006 MS.gene069177:CDS 45.0%
!! ATAAGGTTGACTTGGTGGCT+GGG + chr5.3:19903281-19903300 MS.gene069177:intron 45.0%
!! ATGCTGTTGGTGTTGAAGGT+AGG + chr5.3:19901823-19901842 MS.gene069177:CDS 45.0%
!! CCAGCAGTTGATGACTACAT+CGG - chr5.3:19902824-19902843 None:intergenic 45.0%
!! GACAAGCTGGGTTGAGTTTT+TGG + chr5.3:19901862-19901881 MS.gene069177:CDS 45.0%
!! GGACTGGTTAGAAACAAGTG+GGG + chr5.3:19903870-19903889 MS.gene069177:CDS 45.0%
!! GGGACTGGTTAGAAACAAGT+GGG + chr5.3:19903869-19903888 MS.gene069177:CDS 45.0%
!! GGTTATGCTGTTGGTGTTGA+AGG + chr5.3:19901819-19901838 MS.gene069177:CDS 45.0%
!! GTTTTTAGGGATCCTAGGTG+GGG + chr5.3:19901900-19901919 MS.gene069177:CDS 45.0%
!! TAGAGGGATTCAAGGTGTTG+AGG + chr5.3:19901986-19902005 MS.gene069177:CDS 45.0%
!! TATAAGGTTGACTTGGTGGC+TGG + chr5.3:19903280-19903299 MS.gene069177:intron 45.0%
!! TGCTGTTGGTGTTGAAGGTA+GGG + chr5.3:19901824-19901843 MS.gene069177:CDS 45.0%
!! TGGGACTGGTTAGAAACAAG+TGG + chr5.3:19903868-19903887 MS.gene069177:CDS 45.0%
!! TTTTGACTCTCCAGCATCGT+CGG - chr5.3:19902734-19902753 None:intergenic 45.0%
!! TTTTTAGGGATCCTAGGTGG+GGG + chr5.3:19901901-19901920 MS.gene069177:CDS 45.0%
!!! TAGCAAGGATCTTTTGGGAC+TGG + chr5.3:19903854-19903873 MS.gene069177:CDS 45.0%
!!! TTGTTTTTGGGGGATTGGCA+TGG + chr5.3:19903559-19903578 MS.gene069177:intron 45.0%
AATCCGACAAGCTGGGATTC+CGG - chr5.3:19905812-19905831 None:intergenic 50.0%
ACGACTGAATCCGACAAGCT+GGG - chr5.3:19905819-19905838 None:intergenic 50.0%
ACTTATCAGCTTCGTCGGTG+GGG + chr5.3:19902641-19902660 MS.gene069177:intron 50.0%
AGATCCTTGCTAGCACAAGC+AGG - chr5.3:19903846-19903865 None:intergenic 50.0%
AGCACTTGAAGCTGCAAGAC+AGG + chr5.3:19904422-19904441 MS.gene069177:CDS 50.0%
ATTTGGGGGATCTCGGACAT+TGG - chr5.3:19902997-19903016 None:intergenic 50.0%
CAACTTATCAGCTTCGTCGG+TGG + chr5.3:19902639-19902658 MS.gene069177:intron 50.0%
CACTTGAAGCTGCAAGACAG+GGG + chr5.3:19904424-19904443 MS.gene069177:CDS 50.0%
CAGAATGGGTAGTGAGAGTG+TGG - chr5.3:19901534-19901553 None:intergenic 50.0%
CCGATGTAGTCATCAACTGC+TGG + chr5.3:19902821-19902840 MS.gene069177:intron 50.0%
CGCATTCCCATGTCGTTCAT+GGG - chr5.3:19905443-19905462 None:intergenic 50.0%
CGGCGGACACAATAACTTGA+GGG - chr5.3:19901767-19901786 None:intergenic 50.0%
CTCAAGTGTGGTATCTAGCC+CGG - chr5.3:19905053-19905072 None:intergenic 50.0%
CTCCATGGCATTGCAACCAA+TGG + chr5.3:19901696-19901715 MS.gene069177:CDS 50.0%
CTTAGCAGCTTTCACTGCCT+CGG + chr5.3:19902468-19902487 MS.gene069177:intron 50.0%
GAAGTTGACACCAGGACCAT+TGG - chr5.3:19901715-19901734 None:intergenic 50.0%
GATCCTTCACGTGGTTATCC+CGG + chr5.3:19905467-19905486 MS.gene069177:CDS 50.0%
GCACTTGAAGCTGCAAGACA+GGG + chr5.3:19904423-19904442 MS.gene069177:CDS 50.0%
GCATCCCATCTTACCAATGG+TGG + chr5.3:19901664-19901683 MS.gene069177:CDS 50.0%
GGAGATGGAAGATGCGTTGT+TGG - chr5.3:19901637-19901656 None:intergenic 50.0%
GGCGCATTTGAACAGAGAAC+AGG - chr5.3:19904317-19904336 None:intergenic 50.0%
GGGTGGTGAAGAATTTAGGG+AGG - chr5.3:19901479-19901498 None:intergenic 50.0%
GGTTAGGAGAGAGATGAGAG+AGG - chr5.3:19901589-19901608 None:intergenic 50.0%
GTAAGATGGGATGCCAAGGT+GGG - chr5.3:19901658-19901677 None:intergenic 50.0%
TCAAGTTATTGTGTCCGCCG+CGG + chr5.3:19901767-19901786 MS.gene069177:CDS 50.0%
TCAGCGAAGGAGACATCAAG+GGG - chr5.3:19905190-19905209 None:intergenic 50.0%
TCCGGTGTGCAAACATCTTG+AGG - chr5.3:19904390-19904409 None:intergenic 50.0%
TCGCATTCCCATGTCGTTCA+TGG - chr5.3:19905444-19905463 None:intergenic 50.0%
TGAACACAACCACGAAACGG+TGG - chr5.3:19903771-19903790 None:intergenic 50.0%
TGTTCCTGCTTGTGCTAGCA+AGG + chr5.3:19903839-19903858 MS.gene069177:CDS 50.0%
TTAGCAGCTTTCACTGCCTC+GGG + chr5.3:19902469-19902488 MS.gene069177:intron 50.0%
! AATGGGTAGTGAGAGTGTGG+TGG - chr5.3:19901531-19901550 None:intergenic 50.0%
! ATCACGGCAACCAAAAGCGT+AGG - chr5.3:19904954-19904973 None:intergenic 50.0%
! CTTTTCCACCAGCTTCACCA+GGG - chr5.3:19905252-19905271 None:intergenic 50.0%
! GACCATTGGTTGCAATGCCA+TGG - chr5.3:19901701-19901720 None:intergenic 50.0%
! GAGAGTGTGGTGGTTTGCAT+GGG - chr5.3:19901521-19901540 None:intergenic 50.0%
! GCCTAACGATCCTTTTCTCG+TGG + chr5.3:19904630-19904649 MS.gene069177:intron 50.0%
! GGTCCTGGTGTCAACTTCAA+TGG + chr5.3:19901717-19901736 MS.gene069177:CDS 50.0%
! TGAACAAGGACTGGTGAAGG+AGG + chr5.3:19904266-19904285 MS.gene069177:CDS 50.0%
! TGAGAGTGTGGTGGTTTGCA+TGG - chr5.3:19901522-19901541 None:intergenic 50.0%
!! TAAGGTTGACTTGGTGGCTG+GGG + chr5.3:19903282-19903301 MS.gene069177:intron 50.0%
AACTCCTGGGGAGGATCCTA+TGG + chr5.3:19901935-19901954 MS.gene069177:CDS 55.0%
ACTTACCAGCCACCGTTTCG+TGG + chr5.3:19903759-19903778 MS.gene069177:CDS 55.0%
AGAACGGTTAAATGCCGCGG+CGG - chr5.3:19901784-19901803 None:intergenic 55.0%
ATGCGAGCTGATCCTTCACG+TGG + chr5.3:19905458-19905477 MS.gene069177:CDS 55.0%
CAGCAGCAACACGCGATACA+AGG - chr5.3:19905126-19905145 None:intergenic 55.0%
CTTATCAGCTTCGTCGGTGG+GGG + chr5.3:19902642-19902661 MS.gene069177:intron 55.0%
CTTCACGTGGTTATCCCGGA+AGG + chr5.3:19905471-19905490 MS.gene069177:CDS 55.0%
CTTCCGGGATAACCACGTGA+AGG - chr5.3:19905473-19905492 None:intergenic 55.0%
GACGACTGAATCCGACAAGC+TGG - chr5.3:19905820-19905839 None:intergenic 55.0%
GAGAGGACAGGAAACTCCTG+GGG + chr5.3:19901923-19901942 MS.gene069177:CDS 55.0%
GCATCTTCCATCTCCCACCT+TGG + chr5.3:19901642-19901661 MS.gene069177:CDS 55.0%
GCGGCGGACACAATAACTTG+AGG - chr5.3:19901768-19901787 None:intergenic 55.0%
GGAGAGCTTCAGACCACCAT+TGG - chr5.3:19901680-19901699 None:intergenic 55.0%
GGAGAGGACAGGAAACTCCT+GGG + chr5.3:19901922-19901941 MS.gene069177:CDS 55.0%
GGCATTGCAACCAATGGTCC+TGG + chr5.3:19901702-19901721 MS.gene069177:CDS 55.0%
GGCTGGGGTTGGAAAGCTTA+TGG + chr5.3:19903297-19903316 MS.gene069177:intron 55.0%
GGTAAGATGGGATGCCAAGG+TGG - chr5.3:19901659-19901678 None:intergenic 55.0%
TCACCGGAATCCCAGCTTGT+CGG + chr5.3:19905806-19905825 MS.gene069177:intron 55.0%
TGCATGGGTAGGAGGGAGAA+GGG - chr5.3:19901506-19901525 None:intergenic 55.0%
TTCACTGCCTCGGGATGAGT+CGG + chr5.3:19902478-19902497 MS.gene069177:intron 55.0%
TTGCATGGGTAGGAGGGAGA+AGG - chr5.3:19901507-19901526 None:intergenic 55.0%
! ATTCTTTGGGTGGGGTACCC+TGG + chr5.3:19905232-19905251 MS.gene069177:CDS 55.0%
! GCTTTTCCACCAGCTTCACC+AGG - chr5.3:19905253-19905272 None:intergenic 55.0%
! GGTGGTTTGCATGGGTAGGA+GGG - chr5.3:19901513-19901532 None:intergenic 55.0%
! GTGTGGTGGTTTGCATGGGT+AGG - chr5.3:19901517-19901536 None:intergenic 55.0%
! GTTAAGACCGACTCATCCCG+AGG - chr5.3:19902488-19902507 None:intergenic 55.0%
! TGGTGGTCTGAAGCTCTCCA+TGG + chr5.3:19901681-19901700 MS.gene069177:CDS 55.0%
! TGGTGGTTTGCATGGGTAGG+AGG - chr5.3:19901514-19901533 None:intergenic 55.0%
!! GATCTCGGACATTGGCTCCT+AGG - chr5.3:19902989-19903008 None:intergenic 55.0%
AGCCACGGCATCACAGTCTG+AGG - chr5.3:19904019-19904038 None:intergenic 60.0%
AGGACAGGAAACTCCTGGGG+AGG + chr5.3:19901926-19901945 MS.gene069177:CDS 60.0%
ATCGTCGGCAGACTGAGGGT+TGG - chr5.3:19902719-19902738 None:intergenic 60.0%
CACAACCACGAAACGGTGGC+TGG - chr5.3:19903767-19903786 None:intergenic 60.0%
CAGCATCGTCGGCAGACTGA+GGG - chr5.3:19902723-19902742 None:intergenic 60.0%
CCAACCATAGGATCCTCCCC+AGG - chr5.3:19901942-19901961 None:intergenic 60.0%
CCTGGGGAGGATCCTATGGT+TGG + chr5.3:19901939-19901958 MS.gene069177:CDS 60.0%
GCATGGGTAGGAGGGAGAAG+GGG - chr5.3:19901505-19901524 None:intergenic 60.0%
GGGAGAGGACAGGAAACTCC+TGG + chr5.3:19901921-19901940 MS.gene069177:CDS 60.0%
GGTAGGAGGGAGAAGGGGTT+GGG - chr5.3:19901500-19901519 None:intergenic 60.0%
GTAGGAGGGAGAAGGGGTTG+GGG - chr5.3:19901499-19901518 None:intergenic 60.0%
TGCCTCAGACTGTGATGCCG+TGG + chr5.3:19904014-19904033 MS.gene069177:CDS 60.0%
TGGGATGCCAAGGTGGGAGA+TGG - chr5.3:19901652-19901671 None:intergenic 60.0%
!! GTTGACTTGGTGGCTGGGGT+TGG + chr5.3:19903286-19903305 MS.gene069177:intron 60.0%
AGGGATCCTAGGTGGGGGAG+AGG + chr5.3:19901906-19901925 MS.gene069177:CDS 65.0%
CCAGCATCGTCGGCAGACTG+AGG - chr5.3:19902724-19902743 None:intergenic 65.0%
CCTCAGTCTGCCGACGATGC+TGG + chr5.3:19902721-19902740 MS.gene069177:intron 65.0%
GGGTACCCTGGTGAAGCTGG+TGG + chr5.3:19905244-19905263 MS.gene069177:CDS 65.0%
GGGTAGGAGGGAGAAGGGGT+TGG - chr5.3:19901501-19901520 None:intergenic 65.0%
TCCTAGGTGGGGGAGAGGAC+AGG + chr5.3:19901911-19901930 MS.gene069177:CDS 65.0%
TCCTGTCCTCTCCCCCACCT+AGG - chr5.3:19901915-19901934 None:intergenic 65.0%
! GTGGGGTACCCTGGTGAAGC+TGG + chr5.3:19905241-19905260 MS.gene069177:CDS 65.0%
GGAGGGAGAAGGGGTTGGGG+TGG - chr5.3:19901496-19901515 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 19901411 19905941 19901411 ID=MS.gene069177
chr5.3 mRNA 19901411 19905941 19901411 ID=MS.gene069177.t1;Parent=MS.gene069177
chr5.3 exon 19901411 19902142 19901411 ID=MS.gene069177.t1.exon1;Parent=MS.gene069177.t1
chr5.3 CDS 19901411 19902142 19901411 ID=cds.MS.gene069177.t1;Parent=MS.gene069177.t1
chr5.3 exon 19903735 19903901 19903735 ID=MS.gene069177.t1.exon2;Parent=MS.gene069177.t1
chr5.3 CDS 19903735 19903901 19903735 ID=cds.MS.gene069177.t1;Parent=MS.gene069177.t1
chr5.3 exon 19904008 19904105 19904008 ID=MS.gene069177.t1.exon3;Parent=MS.gene069177.t1
chr5.3 CDS 19904008 19904105 19904008 ID=cds.MS.gene069177.t1;Parent=MS.gene069177.t1
chr5.3 exon 19904214 19904561 19904214 ID=MS.gene069177.t1.exon4;Parent=MS.gene069177.t1
chr5.3 CDS 19904214 19904561 19904214 ID=cds.MS.gene069177.t1;Parent=MS.gene069177.t1
chr5.3 exon 19904891 19905307 19904891 ID=MS.gene069177.t1.exon5;Parent=MS.gene069177.t1
chr5.3 CDS 19904891 19905307 19904891 ID=cds.MS.gene069177.t1;Parent=MS.gene069177.t1
chr5.3 exon 19905393 19905803 19905393 ID=MS.gene069177.t1.exon6;Parent=MS.gene069177.t1
chr5.3 CDS 19905393 19905803 19905393 ID=cds.MS.gene069177.t1;Parent=MS.gene069177.t1
chr5.3 exon 19905904 19905941 19905904 ID=MS.gene069177.t1.exon7;Parent=MS.gene069177.t1
chr5.3 CDS 19905904 19905941 19905904 ID=cds.MS.gene069177.t1;Parent=MS.gene069177.t1
Gene Sequence

>MS.gene069177

ATGATGTTTCACCAACAAAGATTCACCATCATCATCTTCATCTTGTTCTCACTATTACTAATACACCTCCCTAAATTCTTCACCACCCCAACCCCTTCTCCCTCCTACCCATGCAAACCACCACACTCTCACTACCCATTCTGCAACATCTCTCTCTCCATCTCCACAAGAACAACCTCTCTCATCTCTCTCCTAACCCTCTCCGACAAAATCAACCAATTCTCCAACAACGCATCTTCCATCTCCCACCTTGGCATCCCATCTTACCAATGGTGGTCTGAAGCTCTCCATGGCATTGCAACCAATGGTCCTGGTGTCAACTTCAATGGATCAGTTAAATCTGCTACAAGTTTCCCTCAAGTTATTGTGTCCGCCGCGGCATTTAACCGTTCTCTTTGGTTTCTTATTGGTTATGCTGTTGGTGTTGAAGGTAGGGCTATGTTTAATGTTGGACAAGCTGGGTTGAGTTTTTGGGCTCCGAATGTTAATGTTTTTAGGGATCCTAGGTGGGGGAGAGGACAGGAAACTCCTGGGGAGGATCCTATGGTTGGTTCTGCTTATGCTGTTGAGTTTGTTAGAGGGATTCAAGGTGTTGAGGGAATCAAGAATGTGTTGAATGATCATGATAGTGATGATGATGATGGTCTTATGGTGTCTGCTTGTTGTAAACATTTTACTGCTTATGATTTGGAGAAATGGGGAGAGTTCTCTAGGTATAATTTCAATGCTGTGGTAAGTTTTTTTTACTTGCTCTTTGCTTTGAGCCTTTGACCATGTTTGGATAAACAACTTAATTTGTAGCTAGCTTATTGCATAAACACTTATTATAAGCTATTTCCTTAACAAAAGATAAGCTAAAGTCAAACTGTTTTCGTATAAGCTATCATGGAGAGCAAATAAGCTGAAAACAAATTATAATTTATGAAAATGTATGTCATAGATTGTTATCATAAGTTCTCTCAAACAGTAGATAAGATGCTGGTAGACTAGATCAAATAAGTCAATCCAAAAGGGAGTTATAAGGTTGGCTGGGTAACTGTTTGTATTGTTTCTAAGACTTAGCAGCTTTCACTGCCTCGGGATGAGTCGGTCTTAACTCATCTCCGCAGATCTTTCTCTAATATCTCATTCGTTGATGAAGAGAATGAAATTTCTTGTTACTACTTCAAGACTCAGTTTTCATTCTTCATTACACGAACGAGGGATTTGTGCTTTTTATCTCTAGTAGCAACTTATCAGCTTCGTCGGTGGGGGTTTTCATATTGCCAAGAACATCGTTTGTGACCGTCATCTTTGACAAAATAACCAACCCTCAGTCTGCCGACGATGCTGGAGAGTCAAAAGTTAGTTTCGTAGTAAATTCACTGAAACCCTTAGAACAATAACCCCAGCATTTATAGAATCTTTTGACCGATGTAGTCATCAACTGCTGGATTGAGTATTTCAACGGTCATACTGATTTTTAAGGGCTTCAACAAAAAAACCGCAGAACGCCATACTGATGATCAATATTGATCTTTGTGATTTTTGTTGATAACGGTGTGTTGTATATTGACATTTGAGCATCTGTTTCAGCCTAGGAGCCAATGTCCGAGATCCCCCAAATCTATAGTTGGGATTTCAAAAGTTTTAAGGACTAAACCGTTTGAGTTATCTCTTACATGTTATATTCTTGGTGGTTTATTTGCTCTTTCAGTTGTGTTGTCTTTTTCGCATTACCTCTACAGTGTTATCAAGGGTAGGAGAACCCAAAACATTGCATTCAATACTAAATTAGGTGAGTGGCGGAAGCACATACTATCCTCGTGATGACAAAATTACTGAACAAACCCTAGTCAAACCTCTGTCGACATTACTCCAAAAGGGAGTTATAAGGTTGACTTGGTGGCTGGGGTTGGAAAGCTTATGGAAATAAGCTAAAAACAACATATGGACATGTTATAAGCTTTTTTCACAAGCTCTGTCAAACAGTCTTACAAATCCTTATGCTAATAGTTAAGCTCTTCTAGCAAGTCAATCCAAATAGAGAAATCACTTCTATTTTGTTGAATTATTTTGTGTCTACATGCCAGTGTCTGTGCTTTACATGTTTTGGTAAATTGGAAATGCTAATCTAAAATAGTAAATATTTGTTGATAAGTATGAGTTTTGTTTTTGGGGGATTGGCATGGTGTGTTAGTTAAGTCTGTTATTGTTGTTAGCTGAATTTAATTTTGCTAGGTACTTGCTTTCATCGCGCGCGTGTCAGAGATGTGCTTGATTCATTAGTCATATTCATTATTACTATGTTTGAATATGGTGTTGAGTGCAATAGGTTTTTGTAGGTTACACAACAGGATTTGGAAGACACTTACCAGCCACCGTTTCGTGGTTGTGTTCAACAAGGGAAAGCGAGCTGCTTGATGTGTTCTTACAATGAAGTTAATGGTGTTCCTGCTTGTGCTAGCAAGGATCTTTTGGGACTGGTTAGAAACAAGTGGGGATTTGAAGGGTAAGGGTTTGAGGAACTTTTGAAATTTGATTTCATTGAGAAAACACGCGCCAAAGCTTTATTTTTACTGATTATTAGAATTGGTTGTATTGACTTTTGAGTGTAGGTATATTGCCTCAGACTGTGATGCCGTGGCTACTGTTTACGAGTATCAAAAGTATGCAAAATCTGCAGAAGATGCTGTTGCTGATGTTCTTAAAGCAGGTATTTTTCTTTGTCTTTGTAAATTTGTGGTTTTGTTGAATTACTTTCCAAGATTTTATATGAATTGGATGGTTTCCAAGGTATTTTAATTCATCAATTAAATTTTAGGTATGGATATTAATTGTGGAACGTTTATGCTTCGACACACTGAATCTGCCATTGAACAAGGACTGGTGAAGGAGGAAGATTTAGATAGAGCTCTTTTCAACCTGTTCTCTGTTCAAATGCGCCTTGGACTGTTTAACGGAGATCCGAAAAAAGGCAAGTTTGGCAAATTGGGACCTCAAGATGTTTGCACACCGGAACACAAAAAATTAGCACTTGAAGCTGCAAGACAGGGGATCGTACTTCTGAAGAACGACAATAAGTTCCTTCCCTTGGATAAGAAGGATGGTGTCTCCTTAGCTATCATTGGCCCAATGGCAACTACGAGTGAATTAGGTGGCGGTTATTCAGGTATTTTTTTTCTTCATATTGGAGCATTGTAATTTGTCAATCTTCATTTAATCATTAATCATTTAATTGCCTAACGATCCTTTTCTCGTGGTACTATAGTACATTGTATTAAGTGAATCAGGGAATGTTTTCTTATGGAAATGATTGACCTAGTTTACTGATTTCCGAATTATATGCTATATCGATCACTTGAAAAATATTACCGAGCTTTGGTTTAAGTGACTGTGAGTATAGGGGAATGATTTCCCATTTGACAGAAAGGCTGCTTTCTTAAATTTCCATATCATTTGGCCATTAAGATTATTAATGTTTCCTATCTAATAATGTAGGAATTTCTTGCTCTCCAAGAAGCTTATATGATGGACTTAAACAATATGCAAAGACGATATCCTACGCTTTTGGTTGCCGTGATGTAAAATGTGACTCTGATGACGGTTTCGCCGAAGCTATTGACATCGCAAAGCAAACTGATTTTGTTGTAATAGTTGCCGGGCTAGATACCACACTTGAGACAGAGGATCTTGATCGAGTTAGTCTTCTTTTACCTGGTAAACAGATGGACCTTGTATCGCGTGTTGCTGCTGCTAGTAGAAGACCAGTTATTCTAGTTCTTACTGGTGGAGGACCCCTTGATGTCTCCTTCGCTGAAAATAATCAACTAATCACAAGTATTCTTTGGGTGGGGTACCCTGGTGAAGCTGGTGGAAAAGCACTAGCTGAAATCATCTTTGGAGAGTTCAATCCAGGTATGTATTTTGTTAATGAATGAATACAGTGCTCGAAAATGTTGTCTTTATACATATTAAACATCTGAAGTTGATTTTGATGCAGCTGGAAGGCTTCCGATGACTTGGTATCCCGAGTCATTTACCAATGTTCCCATGAACGACATGGGAATGCGAGCTGATCCTTCACGTGGTTATCCCGGAAGGACCTACCGTTTTTATACTGGAAGTAGAGTATATGGATTCGGGCATGGCTTAAGTTACAGTGATTTCTCATACAGGGTTTTATCAGCTCCAAGTAAACTTAGTTTGTCTACAACAACCAATGGTGGTTTGAGAAGAAGCTTATTGACCAAGGTAGAGAAAGAGGTGTTCGAAGTTGATCATGTTCACGTTGATGAGTTGCGAAATTGCAACTCATTGAGCTTCTCAATGCATATTTCTGTGATGAACGTTGGAGATTTAGATGGAAGTCACGTGGTGATGTTGTTCTCTAAATGGCCTAAAAATATACGAGGTTCACCGGAATCCCAGCTTGTCGGATTCAGTCGTCTGCATACAGTTTCTAACAAATCTATTGAAACAAGCATTTTGGTGGATCCTTGTGAACACTTCAGCTTTGCAGATGAACAAGGAAAAAGGATATTACCCTTAG
Protein sequence

>MS.gene069177.t1

MMFHQQRFTIIIFILFSLLLIHLPKFFTTPTPSPSYPCKPPHSHYPFCNISLSISTRTTSLISLLTLSDKINQFSNNASSISHLGIPSYQWWSEALHGIATNGPGVNFNGSVKSATSFPQVIVSAAAFNRSLWFLIGYAVGVEGRAMFNVGQAGLSFWAPNVNVFRDPRWGRGQETPGEDPMVGSAYAVEFVRGIQGVEGIKNVLNDHDSDDDDGLMVSACCKHFTAYDLEKWGEFSRYNFNAVVTQQDLEDTYQPPFRGCVQQGKASCLMCSYNEVNGVPACASKDLLGLVRNKWGFEGYIASDCDAVATVYEYQKYAKSAEDAVADVLKAGMDINCGTFMLRHTESAIEQGLVKEEDLDRALFNLFSVQMRLGLFNGDPKKGKFGKLGPQDVCTPEHKKLALEAARQGIVLLKNDNKFLPLDKKDGVSLAIIGPMATTSELGGGYSGISCSPRSLYDGLKQYAKTISYAFGCRDVKCDSDDGFAEAIDIAKQTDFVVIVAGLDTTLETEDLDRVSLLLPGKQMDLVSRVAAASRRPVILVLTGGGPLDVSFAENNQLITSILWVGYPGEAGGKALAEIIFGEFNPAGRLPMTWYPESFTNVPMNDMGMRADPSRGYPGRTYRFYTGSRVYGFGHGLSYSDFSYRVLSAPSKLSLSTTTNGGLRRSLLTKVEKEVFEVDHVHVDELRNCNSLSFSMHISVMNVGDLDGSHVVMLFSKWPKNIRALQMNKEKGYYP