Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene051339.t1 | XP_013457212.1 | 98.8 | 774 | 9 | 0 | 3 | 776 | 1 | 774 | 0.00E+00 | 1563.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene051339.t1 | A5JTQ3 | 99.4 | 774 | 5 | 0 | 3 | 776 | 1 | 774 | 0.0e+00 | 1563.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene051339.t1 | A0A072UQA9 | 98.8 | 774 | 9 | 0 | 3 | 776 | 1 | 774 | 0.0e+00 | 1563.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene051339 | MS.gene055578 | 0.830919 | 2.24E-55 | -1.69E-46 |
MS.gene051339 | MS.gene056041 | 0.817686 | 2.90E-52 | -1.69E-46 |
MS.gene051339 | MS.gene056526 | 0.8076 | 4.67E-50 | -1.69E-46 |
MS.gene051339 | MS.gene061275 | 0.828328 | 9.56E-55 | -1.69E-46 |
MS.gene051339 | MS.gene08988 | 0.800939 | 1.14E-48 | -1.69E-46 |
MS.gene051339 | MS.gene23886 | 0.810697 | 1.01E-50 | -1.69E-46 |
MS.gene051339 | MS.gene25797 | 0.803299 | 3.72E-49 | -1.69E-46 |
MS.gene051339 | MS.gene28807 | 0.802628 | 5.13E-49 | -1.69E-46 |
MS.gene051339 | MS.gene28867 | 0.802739 | 4.86E-49 | -1.69E-46 |
MS.gene051339 | MS.gene35037 | 0.855902 | 4.62E-62 | -1.69E-46 |
MS.gene051339 | MS.gene35150 | 0.806409 | 8.34E-50 | -1.69E-46 |
MS.gene051339 | MS.gene44100 | 0.819972 | 8.77E-53 | -1.69E-46 |
MS.gene051339 | MS.gene49165 | 0.801725 | 7.86E-49 | -1.69E-46 |
MS.gene051339 | MS.gene49312 | 0.812333 | 4.47E-51 | -1.69E-46 |
MS.gene051339 | MS.gene52403 | 0.807724 | 4.39E-50 | -1.69E-46 |
MS.gene051339 | MS.gene55817 | 0.80198 | 6.97E-49 | -1.69E-46 |
MS.gene051339 | MS.gene57751 | 0.825534 | 4.45E-54 | -1.69E-46 |
MS.gene051339 | MS.gene57752 | 0.806358 | 8.55E-50 | -1.69E-46 |
MS.gene051339 | MS.gene58234 | 0.827574 | 1.45E-54 | -1.69E-46 |
MS.gene051339 | MS.gene58754 | 0.811377 | 7.22E-51 | -1.69E-46 |
MS.gene051339 | MS.gene58835 | 0.806544 | 7.81E-50 | -1.69E-46 |
MS.gene051339 | MS.gene61081 | 0.807405 | 5.14E-50 | -1.69E-46 |
MS.gene051339 | MS.gene61977 | 0.82823 | 1.01E-54 | -1.69E-46 |
MS.gene051339 | MS.gene65301 | 0.808437 | 3.10E-50 | -1.69E-46 |
MS.gene051339 | MS.gene65720 | 0.807081 | 6.02E-50 | -1.69E-46 |
MS.gene051339 | MS.gene70386 | 0.829899 | 3.98E-55 | -1.69E-46 |
MS.gene051339 | MS.gene70403 | 0.81377 | 2.16E-51 | -1.69E-46 |
MS.gene051339 | MS.gene75642 | 0.810976 | 8.82E-51 | -1.69E-46 |
MS.gene051339 | MS.gene77563 | 0.821047 | 4.97E-53 | -1.69E-46 |
MS.gene051339 | MS.gene79251 | 0.801085 | 1.06E-48 | -1.69E-46 |
MS.gene051339 | MS.gene89653 | 0.853727 | 1.97E-61 | -1.69E-46 |
MS.gene051339 | MS.gene90302 | 0.802457 | 5.56E-49 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene051339.t1 | MTR_4g094285 | 98.837 | 774 | 9 | 0 | 3 | 776 | 1 | 774 | 0.0 | 1592 |
MS.gene051339.t1 | MTR_2g008240 | 85.161 | 775 | 114 | 1 | 3 | 776 | 1 | 775 | 0.0 | 1367 |
MS.gene051339.t1 | MTR_1g087240 | 57.332 | 757 | 311 | 5 | 21 | 774 | 8 | 755 | 0.0 | 896 |
MS.gene051339.t1 | MTR_7g109390 | 57.235 | 774 | 306 | 9 | 10 | 774 | 4 | 761 | 0.0 | 894 |
MS.gene051339.t1 | MTR_2g034720 | 57.778 | 765 | 300 | 9 | 16 | 774 | 7 | 754 | 0.0 | 878 |
MS.gene051339.t1 | MTR_1g106860 | 55.757 | 773 | 302 | 12 | 15 | 766 | 6 | 759 | 0.0 | 844 |
MS.gene051339.t1 | MTR_5g030860 | 47.815 | 778 | 374 | 11 | 22 | 776 | 14 | 782 | 0.0 | 748 |
MS.gene051339.t1 | MTR_3g074060 | 47.247 | 781 | 379 | 15 | 16 | 776 | 9 | 776 | 0.0 | 718 |
MS.gene051339.t1 | MTR_5g062430 | 46.164 | 782 | 391 | 13 | 16 | 776 | 10 | 782 | 0.0 | 715 |
MS.gene051339.t1 | MTR_5g062320 | 46.183 | 786 | 394 | 14 | 12 | 776 | 3 | 780 | 0.0 | 714 |
MS.gene051339.t1 | MTR_5g062370 | 46.164 | 782 | 391 | 13 | 16 | 776 | 10 | 782 | 0.0 | 704 |
MS.gene051339.t1 | MTR_5g062650 | 45.812 | 788 | 398 | 14 | 11 | 776 | 5 | 785 | 0.0 | 697 |
MS.gene051339.t1 | MTR_5g062370 | 49.158 | 594 | 281 | 10 | 16 | 596 | 10 | 595 | 0.0 | 573 |
MS.gene051339.t1 | MTR_6g028090 | 26.875 | 640 | 332 | 27 | 56 | 614 | 28 | 612 | 5.67e-40 | 157 |
MS.gene051339.t1 | MTR_6g028120 | 27.414 | 642 | 332 | 28 | 53 | 614 | 6 | 593 | 7.71e-40 | 156 |
MS.gene051339.t1 | MTR_6g028100 | 25.786 | 636 | 344 | 24 | 56 | 614 | 28 | 612 | 6.80e-39 | 154 |
MS.gene051339.t1 | MTR_3g079750 | 27.625 | 619 | 354 | 24 | 56 | 614 | 28 | 612 | 7.11e-39 | 153 |
MS.gene051339.t1 | MTR_6g028110 | 25.693 | 685 | 373 | 29 | 40 | 643 | 14 | 643 | 3.06e-37 | 149 |
MS.gene051339.t1 | MTR_6g028110 | 25.802 | 655 | 351 | 28 | 40 | 614 | 14 | 613 | 1.43e-36 | 147 |
MS.gene051339.t1 | MTR_3g462820 | 25.041 | 603 | 354 | 21 | 56 | 595 | 22 | 589 | 3.54e-35 | 142 |
MS.gene051339.t1 | MTR_2g030000 | 27.068 | 665 | 364 | 26 | 56 | 650 | 30 | 643 | 1.40e-34 | 140 |
MS.gene051339.t1 | MTR_7g086030 | 25.875 | 657 | 351 | 28 | 56 | 639 | 4 | 597 | 6.00e-34 | 138 |
MS.gene051339.t1 | MTR_7g086030 | 25.875 | 657 | 351 | 28 | 56 | 639 | 29 | 622 | 1.56e-33 | 137 |
MS.gene051339.t1 | MTR_5g069800 | 26.677 | 626 | 354 | 26 | 56 | 614 | 5 | 592 | 2.39e-33 | 136 |
MS.gene051339.t1 | MTR_5g069740 | 25.884 | 622 | 352 | 24 | 56 | 614 | 5 | 580 | 6.49e-33 | 135 |
MS.gene051339.t1 | MTR_7g086010 | 28.495 | 372 | 206 | 17 | 91 | 439 | 118 | 452 | 1.03e-23 | 105 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene051339.t1 | AT5G64570 | 71.483 | 782 | 204 | 4 | 7 | 776 | 10 | 784 | 0.0 | 1189 |
MS.gene051339.t1 | AT5G09730 | 68.229 | 768 | 232 | 3 | 14 | 776 | 13 | 773 | 0.0 | 1125 |
MS.gene051339.t1 | AT5G64570 | 73.046 | 627 | 162 | 2 | 156 | 776 | 1 | 626 | 0.0 | 995 |
MS.gene051339.t1 | AT5G64570 | 73.898 | 590 | 141 | 3 | 7 | 590 | 10 | 592 | 0.0 | 907 |
MS.gene051339.t1 | AT3G19620 | 56.275 | 757 | 317 | 7 | 20 | 766 | 6 | 758 | 0.0 | 883 |
MS.gene051339.t1 | AT5G49360 | 57.723 | 764 | 305 | 10 | 21 | 774 | 15 | 770 | 0.0 | 868 |
MS.gene051339.t1 | AT1G02640 | 54.809 | 759 | 336 | 4 | 17 | 774 | 6 | 758 | 0.0 | 868 |
MS.gene051339.t1 | AT5G10560 | 47.656 | 768 | 361 | 9 | 41 | 774 | 30 | 790 | 0.0 | 744 |
MS.gene051339.t1 | AT1G78060 | 47.340 | 752 | 370 | 11 | 42 | 776 | 25 | 767 | 0.0 | 723 |
MS.gene051339.t1 | AT5G09700 | 66.598 | 482 | 155 | 2 | 301 | 776 | 45 | 526 | 0.0 | 689 |
MS.gene051339.t1 | AT3G47050 | 26.942 | 605 | 363 | 23 | 53 | 605 | 7 | 584 | 3.05e-39 | 154 |
MS.gene051339.t1 | AT3G47000 | 27.169 | 611 | 368 | 24 | 56 | 614 | 10 | 595 | 1.99e-38 | 152 |
MS.gene051339.t1 | AT3G47040 | 24.733 | 655 | 374 | 24 | 56 | 645 | 10 | 610 | 1.29e-36 | 146 |
MS.gene051339.t1 | AT3G47010 | 26.324 | 623 | 366 | 25 | 52 | 614 | 7 | 596 | 2.49e-36 | 145 |
MS.gene051339.t1 | AT3G47010 | 25.645 | 620 | 373 | 22 | 52 | 614 | 7 | 595 | 7.76e-36 | 144 |
MS.gene051339.t1 | AT5G04885 | 26.518 | 626 | 359 | 24 | 56 | 618 | 30 | 617 | 2.52e-35 | 143 |
MS.gene051339.t1 | AT5G04885 | 26.518 | 626 | 359 | 24 | 56 | 618 | 30 | 617 | 2.52e-35 | 143 |
MS.gene051339.t1 | AT5G04885 | 26.518 | 626 | 359 | 24 | 56 | 618 | 47 | 634 | 2.67e-35 | 143 |
MS.gene051339.t1 | AT3G47040 | 24.478 | 670 | 382 | 25 | 56 | 645 | 10 | 635 | 2.36e-34 | 140 |
MS.gene051339.t1 | AT3G62710 | 25.731 | 684 | 366 | 28 | 19 | 614 | 11 | 640 | 9.30e-34 | 138 |
MS.gene051339.t1 | AT5G20940 | 26.572 | 636 | 363 | 26 | 43 | 614 | 18 | 613 | 2.88e-32 | 133 |
MS.gene051339.t1 | AT3G47000 | 29.885 | 435 | 235 | 20 | 56 | 439 | 10 | 425 | 2.84e-31 | 128 |
MS.gene051339.t1 | AT5G20950 | 26.034 | 653 | 377 | 28 | 40 | 627 | 90 | 701 | 1.10e-30 | 129 |
MS.gene051339.t1 | AT5G20950 | 26.060 | 637 | 367 | 27 | 56 | 627 | 26 | 623 | 1.73e-30 | 128 |
MS.gene051339.t1 | AT5G20950 | 26.060 | 637 | 367 | 27 | 56 | 627 | 26 | 623 | 1.73e-30 | 128 |
MS.gene051339.t1 | AT3G47040 | 26.786 | 448 | 232 | 18 | 56 | 439 | 10 | 425 | 3.95e-30 | 124 |
MS.gene051339.t1 | AT3G47010 | 26.915 | 457 | 252 | 18 | 52 | 451 | 7 | 438 | 1.19e-27 | 117 |
MS.gene051339.t1 | AT3G47040 | 23.348 | 681 | 384 | 26 | 56 | 645 | 10 | 643 | 2.01e-25 | 112 |
MS.gene051339.t1 | AT3G47050 | 28.713 | 303 | 161 | 11 | 53 | 312 | 7 | 297 | 2.31e-23 | 103 |
MS.gene051339.t1 | AT3G47010 | 26.150 | 413 | 266 | 15 | 217 | 614 | 29 | 417 | 6.99e-23 | 102 |
MS.gene051339.t1 | AT3G47000 | 26.225 | 408 | 273 | 15 | 217 | 614 | 29 | 418 | 2.26e-21 | 98.2 |
Find 189 sgRNAs with CRISPR-Local
Find 265 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCAGACCACCATTCATATTT+TGG | 0.140699 | 4.1:+19428040 | None:intergenic |
CACCAAACATTAACATATTT+AGG | 0.157012 | 4.1:-19427731 | MS.gene051339:CDS |
ATTAAATCATTGGCAGTTAT+TGG | 0.184597 | 4.1:-19426236 | MS.gene051339:CDS |
CGTGGCAAATGGAAACTAAA+TGG | 0.204423 | 4.1:-19427274 | MS.gene051339:CDS |
CTCAACTTTCGAGCATAAAT+TGG | 0.211723 | 4.1:-19425001 | MS.gene051339:CDS |
GCTGACCCTGATCTTCTTAA+AGG | 0.226486 | 4.1:-19427304 | MS.gene051339:CDS |
TGTTCCTACAATCAAGTAAA+TGG | 0.245995 | 4.1:-19427340 | MS.gene051339:CDS |
GCTGAAGTGCAGACATCTTT+TGG | 0.254948 | 4.1:+19426347 | None:intergenic |
TCTTGACCTCTTCCCCATCT+TGG | 0.278328 | 4.1:+19427705 | None:intergenic |
TGCAGCTTCCTCAGGGGTCT+TGG | 0.289885 | 4.1:+19426730 | None:intergenic |
GCCATAGCTGATGTCATCTT+TGG | 0.300033 | 4.1:-19425679 | MS.gene051339:CDS |
TGCCAATGATTTAATAGCTT+TGG | 0.304831 | 4.1:+19426244 | None:intergenic |
CATGCCTCCTCCAGACATTA+TGG | 0.305665 | 4.1:+19425780 | None:intergenic |
ATTCGCCAATGCTGGATTCT+TGG | 0.315695 | 4.1:+19428189 | None:intergenic |
GGGGAAACTGTCTTCTCATT+TGG | 0.319056 | 4.1:-19425039 | MS.gene051339:CDS |
TCAATCACACAGCTCTTAAA+AGG | 0.325703 | 4.1:+19427385 | None:intergenic |
ATTGTAGACGGCATTGTTAA+TGG | 0.328849 | 4.1:+19426442 | None:intergenic |
ACCAAACATTAACATATTTA+GGG | 0.344637 | 4.1:-19427730 | MS.gene051339:CDS |
TTAAATCATTGGCAGTTATT+GGG | 0.348888 | 4.1:-19426235 | MS.gene051339:CDS |
AATCCAGCATTGGCGAATTA+CGG | 0.359386 | 4.1:-19428184 | MS.gene051339:CDS |
TCAAATTCTCAAGGTCATAA+TGG | 0.369386 | 4.1:-19428338 | None:intergenic |
ATCCAGCATTGGCGAATTAC+GGG | 0.371963 | 4.1:-19428183 | MS.gene051339:CDS |
GACTTGGCTGCAGCTTCCTC+AGG | 0.373722 | 4.1:+19426722 | None:intergenic |
TTTAAGAGCTGTGTGATTGA+TGG | 0.379593 | 4.1:-19427382 | MS.gene051339:CDS |
GAGAATAGGCATAGGAAAAC+TGG | 0.380578 | 4.1:+19427952 | None:intergenic |
GCTGTCAAGCAAGGGCTTAT+AGG | 0.388682 | 4.1:-19426473 | MS.gene051339:CDS |
ATGCGTCTAGGTTTCTTTGA+TGG | 0.391137 | 4.1:-19426404 | MS.gene051339:CDS |
ATTCTGTGGGTTGGCTATCC+TGG | 0.392669 | 4.1:-19425718 | MS.gene051339:CDS |
GATCCTAGCAAGCAACCTTA+TGG | 0.393133 | 4.1:-19426380 | MS.gene051339:CDS |
CCATAGCTGATGTCATCTTT+GGG | 0.402935 | 4.1:-19425678 | MS.gene051339:CDS |
AGCAGCAACCTTAAGCTTGT+TGG | 0.404848 | 4.1:+19427599 | None:intergenic |
TGCCAAAGCTATTAAATCAT+TGG | 0.406948 | 4.1:-19426246 | MS.gene051339:CDS |
TTTCCATAAGGTTGCTTGCT+AGG | 0.410934 | 4.1:+19426377 | None:intergenic |
TGGAGATTCCAACAAGCTTA+AGG | 0.418052 | 4.1:-19427607 | MS.gene051339:CDS |
ACTAACTGTTGCTGCTGTCC+TGG | 0.428145 | 4.1:+19425844 | None:intergenic |
TGACAGCACCTTCTGTATAT+CGG | 0.431143 | 4.1:+19426489 | None:intergenic |
ATAACACCTTTAAGAAGATC+AGG | 0.432414 | 4.1:+19427298 | None:intergenic |
ACCTTCGTAGTTTCCAATCA+TGG | 0.434772 | 4.1:+19426190 | None:intergenic |
ATTGGTTAAAGCACCACAAT+TGG | 0.441371 | 4.1:-19424983 | MS.gene051339:CDS |
ATACATTACCACAGCATTGA+AGG | 0.443167 | 4.1:+19427518 | None:intergenic |
TGCACCTCAGAAACACTTGT+TGG | 0.443221 | 4.1:-19424782 | MS.gene051339:CDS |
TTGTGGGAACTAAGGCTGTT+AGG | 0.443745 | 4.1:+19426019 | None:intergenic |
AGGCGAAAACTGCAGATGTT+TGG | 0.443791 | 4.1:+19428221 | None:intergenic |
GGCCCAATGCTAATGCTACT+AGG | 0.444209 | 4.1:-19426214 | MS.gene051339:CDS |
AACCCGTAATTCGCCAATGC+TGG | 0.444375 | 4.1:+19428181 | None:intergenic |
GTGATTCTTGCCATAATGTC+TGG | 0.445969 | 4.1:-19425790 | MS.gene051339:CDS |
GCATTGGTGCATTGAACATC+AGG | 0.448023 | 4.1:+19425979 | None:intergenic |
GTTGGCTATCCTGGAGAAGC+TGG | 0.450796 | 4.1:-19425709 | MS.gene051339:CDS |
GGTTGGCTGGTTTAACATAT+TGG | 0.452673 | 4.1:-19427755 | MS.gene051339:CDS |
CTCATGTTCATATTGGTCAT+TGG | 0.453094 | 4.1:+19425111 | None:intergenic |
GTTCCCACAAGCTTTGCTGC+TGG | 0.455205 | 4.1:-19426006 | MS.gene051339:CDS |
ATGCACAACGTCGGGTTGGC+TGG | 0.455328 | 4.1:-19427768 | MS.gene051339:CDS |
TCCCTAAATATGTTAATGTT+TGG | 0.457701 | 4.1:+19427729 | None:intergenic |
CAGCTTCACGAGCTAGCTCC+TGG | 0.458313 | 4.1:+19426321 | None:intergenic |
CAAGAGCAATGCACAACGTC+GGG | 0.459504 | 4.1:-19427776 | MS.gene051339:CDS |
AGGATTAACATACTTCTTCC+AGG | 0.461097 | 4.1:-19425862 | MS.gene051339:CDS |
GACATTATGGCAAGAATCAC+AGG | 0.461878 | 4.1:+19425793 | None:intergenic |
ACATATTTAGGGATCCAAGA+TGG | 0.461963 | 4.1:-19427719 | MS.gene051339:CDS |
ATCCGGCCTCATGTTCATAT+TGG | 0.462557 | 4.1:+19425104 | None:intergenic |
AAAGAAGCTGCAATGAGAAT+AGG | 0.464509 | 4.1:+19427938 | None:intergenic |
TCCCTTTGTTCTTGATCCTG+AGG | 0.465656 | 4.1:+19424860 | None:intergenic |
CGGTGCAAATCTTGCAATAG+AGG | 0.465750 | 4.1:-19425899 | MS.gene051339:CDS |
GGGTAGCCTGTAGCAGGATC+CGG | 0.467218 | 4.1:+19425087 | None:intergenic |
CTTGCTAGCAAATATGCAGC+AGG | 0.468402 | 4.1:-19427660 | MS.gene051339:CDS |
TGTAAGTCGCTTGATGTTGT+TGG | 0.471371 | 4.1:-19424916 | MS.gene051339:CDS |
CATATTTAGGGATCCAAGAT+GGG | 0.473111 | 4.1:-19427718 | MS.gene051339:CDS |
CTTCATGGAGTCTCTAACAT+TGG | 0.474694 | 4.1:-19428013 | MS.gene051339:CDS |
TGAGGTGCATTGTGCACTGC+AGG | 0.474909 | 4.1:+19424796 | None:intergenic |
GCTGTTGATGTAAGCAGACT+TGG | 0.476218 | 4.1:-19428067 | MS.gene051339:CDS |
GAGAAACCTTACCTTTCCTA+TGG | 0.476556 | 4.1:+19427895 | None:intergenic |
TGGTGGTCTGAAGCACTTCA+TGG | 0.476761 | 4.1:-19428028 | MS.gene051339:CDS |
AGCAAAGCTTGTGGGAACTA+AGG | 0.478113 | 4.1:+19426011 | None:intergenic |
ACCTCAGGATCAAGAACAAA+GGG | 0.481557 | 4.1:-19424861 | MS.gene051339:CDS |
CATATTTGCTAGCAAGTAAA+GGG | 0.484061 | 4.1:+19427667 | None:intergenic |
TTTGGACCAAGGTTTCCATA+AGG | 0.489120 | 4.1:+19426365 | None:intergenic |
GCATATTTGCTAGCAAGTAA+AGG | 0.490578 | 4.1:+19427666 | None:intergenic |
TTGAGTGTGGTTGATGAACT+TGG | 0.490808 | 4.1:-19424688 | MS.gene051339:CDS |
AAGGTGTTATCCGTGGCAAA+TGG | 0.492172 | 4.1:-19427285 | MS.gene051339:CDS |
CTTTCCTATGGTTTGAAACA+AGG | 0.492728 | 4.1:+19427907 | None:intergenic |
GGCATCGTCTAGTGCAGCAT+TGG | 0.492888 | 4.1:+19425963 | None:intergenic |
CTACCAGGGTAGCCTGTAGC+AGG | 0.493617 | 4.1:+19425081 | None:intergenic |
ATGAGGCCGGATCCTGCTAC+AGG | 0.493861 | 4.1:-19425093 | MS.gene051339:CDS |
AGAAGTTGCAAATGTAGCTA+AGG | 0.498193 | 4.1:-19425818 | MS.gene051339:CDS |
CTTTAAATCATCACGCTCAA+AGG | 0.498511 | 4.1:+19424610 | None:intergenic |
AATGCTACTAGGGCCATGAT+TGG | 0.501422 | 4.1:-19426203 | MS.gene051339:CDS |
GGTCTACAACAAACTGATGA+TGG | 0.502433 | 4.1:-19427627 | MS.gene051339:CDS |
TTCGAGAAAGTACACTTGAC+AGG | 0.502478 | 4.1:-19424757 | MS.gene051339:CDS |
TAGCCTTTGATATTCACCTC+AGG | 0.509602 | 4.1:-19424876 | MS.gene051339:CDS |
TGTCTGCACTTCAGCAAACC+AGG | 0.511708 | 4.1:-19426339 | MS.gene051339:CDS |
GCTTCCTTGTTTCAAACCAT+AGG | 0.512430 | 4.1:-19427911 | MS.gene051339:CDS |
GTGGCAAATGGAAACTAAAT+GGG | 0.513107 | 4.1:-19427273 | MS.gene051339:intron |
GCTCGTGAAGCTGCAAGGCA+AGG | 0.513237 | 4.1:-19426311 | MS.gene051339:CDS |
ACTGTCTTCTCATTTGGAGA+TGG | 0.513776 | 4.1:-19425033 | MS.gene051339:CDS |
GCAGCTCCACCAGCTTCTCC+AGG | 0.518655 | 4.1:+19425700 | None:intergenic |
CTTGTTTCAAACCATAGGAA+AGG | 0.519277 | 4.1:-19427906 | MS.gene051339:intron |
ATAGGAAAACTGGTTGCTCC+AGG | 0.520085 | 4.1:+19427962 | None:intergenic |
TAAAATCTGTATGTTCTACC+AGG | 0.524873 | 4.1:+19425066 | None:intergenic |
CAAACATGATCCTCAGCTAA+AGG | 0.526437 | 4.1:+19424952 | None:intergenic |
CTCGTGAAGCTGCAAGGCAA+GGG | 0.532764 | 4.1:-19426310 | MS.gene051339:CDS |
GCCCTAGTAGCATTAGCATT+GGG | 0.533958 | 4.1:+19426212 | None:intergenic |
TTGGGATTCCAAAATATGAA+TGG | 0.535603 | 4.1:-19428048 | MS.gene051339:CDS |
GCAAGTAAAGGGTCTTCTCC+TGG | 0.538903 | 4.1:+19427678 | None:intergenic |
ATCACAAGCATTCTGTGGGT+TGG | 0.539372 | 4.1:-19425727 | MS.gene051339:CDS |
GGAGTCTCTAACATTGGTCC+AGG | 0.541530 | 4.1:-19428007 | MS.gene051339:CDS |
TGGATTCTTGGCAACATCGC+AGG | 0.541711 | 4.1:+19428201 | None:intergenic |
GACAGGAAAATCAGAAGCAC+TGG | 0.541961 | 4.1:-19424740 | MS.gene051339:CDS |
CAGCCAGCAGCAAAGCTTGT+GGG | 0.542585 | 4.1:+19426003 | None:intergenic |
CAGAGGAAAACAGAGACGTT+AGG | 0.545414 | 4.1:+19428295 | None:intergenic |
GGCTATCCTGGAGAAGCTGG+TGG | 0.546561 | 4.1:-19425706 | MS.gene051339:CDS |
TGTCGCAAAATTATTGTAGA+CGG | 0.546588 | 4.1:+19426430 | None:intergenic |
GCAGCCAAGTCTATTCTAGC+AGG | 0.547377 | 4.1:-19426710 | MS.gene051339:intron |
ACTTGGCTGCAGCTTCCTCA+GGG | 0.548953 | 4.1:+19426723 | None:intergenic |
GGTGTCTGTTCCTTTAGCTG+AGG | 0.552719 | 4.1:-19424962 | MS.gene051339:CDS |
AGCTAGCTCGTGAAGCTGCA+AGG | 0.553456 | 4.1:-19426316 | MS.gene051339:CDS |
GGCCCTAGTAGCATTAGCAT+TGG | 0.555454 | 4.1:+19426211 | None:intergenic |
TTTACCTGCTAGAATAGACT+TGG | 0.558324 | 4.1:+19426706 | None:intergenic |
ACAGAAGGTGCTGTCAAGCA+AGG | 0.561917 | 4.1:-19426482 | MS.gene051339:CDS |
TTAATAGCTTTGGCATTCAG+AGG | 0.562815 | 4.1:+19426254 | None:intergenic |
AAAAGATCACAAGCATTCTG+TGG | 0.568704 | 4.1:-19425732 | MS.gene051339:CDS |
GATCCTGAGGTGAATATCAA+AGG | 0.569135 | 4.1:+19424873 | None:intergenic |
AGGGATCCAAGATGGGGAAG+AGG | 0.570000 | 4.1:-19427711 | MS.gene051339:CDS |
AAGGTTGACATTGCAAGAGA+AGG | 0.572395 | 4.1:-19428110 | MS.gene051339:CDS |
AGCAATGCACAACGTCGGGT+TGG | 0.573033 | 4.1:-19427772 | MS.gene051339:CDS |
AAGCAACCTTATGGAAACCT+TGG | 0.575163 | 4.1:-19426371 | MS.gene051339:CDS |
GCCCAATGCTAATGCTACTA+GGG | 0.577253 | 4.1:-19426213 | MS.gene051339:CDS |
TTGACATTGCAAGAGAAGGT+TGG | 0.577392 | 4.1:-19428106 | MS.gene051339:CDS |
CACAGCTCTTAAAAGGTGGT+TGG | 0.578720 | 4.1:+19427392 | None:intergenic |
CAGAAGGTGCTGTCAAGCAA+GGG | 0.579821 | 4.1:-19426481 | MS.gene051339:CDS |
GGAAAACATATGCTTCATGT+AGG | 0.580882 | 4.1:-19424646 | MS.gene051339:CDS |
TTTGCGACATTAATGCGTCT+AGG | 0.581567 | 4.1:-19426416 | MS.gene051339:CDS |
CAGCATATGATGTTGATGAC+TGG | 0.584387 | 4.1:-19427560 | MS.gene051339:CDS |
CACCTCAGGATCAAGAACAA+AGG | 0.587124 | 4.1:-19424862 | MS.gene051339:CDS |
CATTTAGTTTCCATTTGCCA+CGG | 0.587656 | 4.1:+19427275 | None:intergenic |
TTTCTTGGCCGATATACAGA+AGG | 0.588531 | 4.1:-19426497 | MS.gene051339:CDS |
AAAGATCACAAGCATTCTGT+GGG | 0.588555 | 4.1:-19425731 | MS.gene051339:CDS |
CCCAAAGATGACATCAGCTA+TGG | 0.590854 | 4.1:+19425678 | None:intergenic |
GACCAATATGAACATGAGGC+CGG | 0.590969 | 4.1:-19425106 | MS.gene051339:CDS |
AGAAATTGAGTGTGGATGCA+AGG | 0.597818 | 4.1:-19428150 | MS.gene051339:CDS |
CTGTTGATGTAAGCAGACTT+GGG | 0.597835 | 4.1:-19428066 | MS.gene051339:CDS |
TGTTGCCAAGAATCCAGCAT+TGG | 0.599346 | 4.1:-19428194 | MS.gene051339:CDS |
TATGCAGCAGGGTACGTGAA+AGG | 0.600652 | 4.1:-19427648 | MS.gene051339:CDS |
TAGAGGCAGAGAGTCATGAC+AGG | 0.601562 | 4.1:-19425882 | MS.gene051339:CDS |
GGGTGAAAGACCTTGTGAGA+AGG | 0.601719 | 4.1:-19428129 | MS.gene051339:CDS |
ATTTGCACCGACTACAATCA+CGG | 0.602874 | 4.1:+19425912 | None:intergenic |
ACTTTGTCTACATATGATTG+TGG | 0.603286 | 4.1:+19425135 | None:intergenic |
CATCAACAGCAGAATTCACA+AGG | 0.603921 | 4.1:+19428080 | None:intergenic |
GGTTGCTCCAGGTATAACAT+TGG | 0.604127 | 4.1:+19427973 | None:intergenic |
GAAGTTGCAAATGTAGCTAA+GGG | 0.606098 | 4.1:-19425817 | MS.gene051339:CDS |
CTTCTTAAAGGTGTTATCCG+TGG | 0.607358 | 4.1:-19427292 | MS.gene051339:CDS |
ACAGCCAGCAGCAAAGCTTG+TGG | 0.607399 | 4.1:+19426002 | None:intergenic |
GCGTTACACCTTCAATGCTG+TGG | 0.608802 | 4.1:-19427526 | MS.gene051339:intron |
CATAATGTCTGGAGGAGGCA+TGG | 0.611672 | 4.1:-19425779 | MS.gene051339:CDS |
CTTGCCATAATGTCTGGAGG+AGG | 0.615660 | 4.1:-19425784 | MS.gene051339:CDS |
AAAGGTGATGTATATTTGCA+TGG | 0.623811 | 4.1:+19426048 | None:intergenic |
AAAGCCAACAAGTGTTTCTG+AGG | 0.625434 | 4.1:+19424778 | None:intergenic |
GAAATTGAGTGTGGATGCAA+GGG | 0.626342 | 4.1:-19428149 | MS.gene051339:CDS |
GCAAGAGCAATGCACAACGT+CGG | 0.629064 | 4.1:-19427777 | MS.gene051339:CDS |
GATGCAACCGTGATTGTAGT+CGG | 0.629741 | 4.1:-19425919 | MS.gene051339:CDS |
TGTTTGTAATGATTTGAGTG+TGG | 0.631283 | 4.1:-19424701 | MS.gene051339:CDS |
GGCAACAGAAAAGTTGCCCT+AGG | 0.635515 | 4.1:-19424667 | MS.gene051339:CDS |
TGATTGTGGATACCATGTCA+TGG | 0.635666 | 4.1:+19425149 | None:intergenic |
GCTGCAATGAGAATAGGCAT+AGG | 0.636909 | 4.1:+19427944 | None:intergenic |
AAATATACATCACCTTTGCA+AGG | 0.638543 | 4.1:-19426042 | MS.gene051339:CDS |
ATCACACAGCTCTTAAAAGG+TGG | 0.639170 | 4.1:+19427388 | None:intergenic |
AAAGGAACAGACACCAATTG+TGG | 0.639642 | 4.1:+19424970 | None:intergenic |
ACAGGATTGGATTTGAACTG+TGG | 0.643755 | 4.1:-19426524 | MS.gene051339:intron |
GATTGTGGATACCATGTCAT+GGG | 0.644060 | 4.1:+19425150 | None:intergenic |
AAGGCTGTTAGGCCTTGCAA+AGG | 0.647052 | 4.1:+19426030 | None:intergenic |
TAACACCTTTAAGAAGATCA+GGG | 0.647148 | 4.1:+19427299 | None:intergenic |
GGATTCCAAAATATGAATGG+TGG | 0.648983 | 4.1:-19428045 | MS.gene051339:CDS |
GATCCTGCTACAGGCTACCC+TGG | 0.649738 | 4.1:-19425084 | MS.gene051339:CDS |
CAATGACCAATATGAACATG+AGG | 0.652360 | 4.1:-19425110 | MS.gene051339:CDS |
CTTGGCTGCAGCTTCCTCAG+GGG | 0.657652 | 4.1:+19426724 | None:intergenic |
ACCACAACTCAGCAAAAGTG+TGG | 0.657846 | 4.1:+19428255 | None:intergenic |
GCAATGTCAACCTTCTCACA+AGG | 0.660006 | 4.1:+19428119 | None:intergenic |
CAAACAGAACAAAGAAACAG+AGG | 0.661188 | 4.1:+19428278 | None:intergenic |
AGATCAGGGTCAGCACAAGT+CGG | 0.668758 | 4.1:+19427313 | None:intergenic |
AAAATCTGTATGTTCTACCA+GGG | 0.669451 | 4.1:+19425067 | None:intergenic |
GGAAGAGGTCAAGAAACACC+AGG | 0.670289 | 4.1:-19427696 | MS.gene051339:CDS |
ATATTTAGGGATCCAAGATG+GGG | 0.672629 | 4.1:-19427717 | MS.gene051339:CDS |
GTGGAAGGCTACCCATGACA+TGG | 0.674570 | 4.1:-19425161 | MS.gene051339:CDS |
TATGATGTTGATGACTGGAA+AGG | 0.681867 | 4.1:-19427555 | MS.gene051339:CDS |
GGTGCATTGTGCACTGCAGG+AGG | 0.684891 | 4.1:+19424799 | None:intergenic |
CTGCAACAAGAAATTGAGTG+TGG | 0.685493 | 4.1:-19428158 | MS.gene051339:CDS |
GCCATGATTGGAAACTACGA+AGG | 0.687224 | 4.1:-19426191 | MS.gene051339:intron |
AATCACGGTTGCATCTGCTG+AGG | 0.690719 | 4.1:+19425927 | None:intergenic |
TTGCTAGCAAATATGCAGCA+GGG | 0.692959 | 4.1:-19427659 | MS.gene051339:CDS |
ATTCTTGCCATAATGTCTGG+AGG | 0.713271 | 4.1:-19425787 | MS.gene051339:CDS |
ACATTACACCAAGACCCCTG+AGG | 0.763610 | 4.1:-19426738 | MS.gene051339:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AACTTTTAAATATTGTTTTA+TGG | - | chr4.1:19425109-19425128 | MS.gene051339:CDS | 10.0% |
!!! | ATATTTTGTTTATATTTGAA+TGG | + | chr4.1:19425732-19425751 | None:intergenic | 10.0% |
!!! | CATATAAAAGATAATTTTTT+TGG | + | chr4.1:19425898-19425917 | None:intergenic | 10.0% |
!! | CATATATTATTGAGAATTAT+TGG | + | chr4.1:19427644-19427663 | None:intergenic | 15.0% |
!!! | AATTTTTTTGGATGTAAATT+GGG | + | chr4.1:19425886-19425905 | None:intergenic | 15.0% |
!!! | ATTTTTCCTATAAAAGTTAT+AGG | + | chr4.1:19426789-19426808 | None:intergenic | 15.0% |
!!! | CAACTTAATTTTTTTTATTC+AGG | - | chr4.1:19427754-19427773 | MS.gene051339:CDS | 15.0% |
!!! | TAATTTTTTTGGATGTAAAT+TGG | + | chr4.1:19425887-19425906 | None:intergenic | 15.0% |
!! | AATGATAATTCTGTAATATG+AGG | + | chr4.1:19427324-19427343 | None:intergenic | 20.0% |
!! | ACCAAACATTAACATATTTA+GGG | - | chr4.1:19425207-19425226 | MS.gene051339:intron | 20.0% |
!!! | AAATTTTGATTTTACAGGAT+TGG | - | chr4.1:19426400-19426419 | MS.gene051339:CDS | 20.0% |
!!! | AACAACTTTGATTTTAAACT+CGG | - | chr4.1:19427417-19427436 | MS.gene051339:CDS | 20.0% |
!!! | AACATACAGATTTTATAAAG+GGG | - | chr4.1:19427879-19427898 | MS.gene051339:intron | 20.0% |
!!! | AGAACATACAGATTTTATAA+AGG | - | chr4.1:19427877-19427896 | MS.gene051339:intron | 20.0% |
!!! | CTTAATTTTTTTTATTCAGG+TGG | - | chr4.1:19427757-19427776 | MS.gene051339:CDS | 20.0% |
!!! | CTTTTTATTAGTTTTAGCAA+AGG | + | chr4.1:19427190-19427209 | None:intergenic | 20.0% |
!!! | GAACATACAGATTTTATAAA+GGG | - | chr4.1:19427878-19427897 | MS.gene051339:intron | 20.0% |
!!! | TGTACAAATTTTGATTTTAC+AGG | - | chr4.1:19426395-19426414 | MS.gene051339:CDS | 20.0% |
! | ATTAAATCATTGGCAGTTAT+TGG | - | chr4.1:19426701-19426720 | MS.gene051339:intron | 25.0% |
! | CACCAAACATTAACATATTT+AGG | - | chr4.1:19425206-19425225 | MS.gene051339:intron | 25.0% |
! | GAATTATCATTCCAATAACT+TGG | - | chr4.1:19427333-19427352 | MS.gene051339:CDS | 25.0% |
! | TCACTAGGATCTAATTATAT+GGG | - | chr4.1:19427720-19427739 | MS.gene051339:CDS | 25.0% |
! | TCCCTAAATATGTTAATGTT+TGG | + | chr4.1:19425211-19425230 | None:intergenic | 25.0% |
! | TTAAATCATTGGCAGTTATT+GGG | - | chr4.1:19426702-19426721 | MS.gene051339:intron | 25.0% |
! | TTACACAATCACATATTCAT+AGG | - | chr4.1:19426269-19426288 | MS.gene051339:CDS | 25.0% |
!! | TTTTCCATTTACTTGATTGT+AGG | + | chr4.1:19425604-19425623 | None:intergenic | 25.0% |
!!! | AGCTTCTTTAGAATTATACA+AGG | - | chr4.1:19426349-19426368 | MS.gene051339:CDS | 25.0% |
!!! | ATTTTTTTTATTCAGGTGGA+AGG | - | chr4.1:19427761-19427780 | MS.gene051339:CDS | 25.0% |
!!! | TAATTGCTGTTGATTTTGTT+AGG | - | chr4.1:19425494-19425513 | MS.gene051339:intron | 25.0% |
AAAATCTGTATGTTCTACCA+GGG | + | chr4.1:19427873-19427892 | None:intergenic | 30.0% | |
AAAGGTGATGTATATTTGCA+TGG | + | chr4.1:19426892-19426911 | None:intergenic | 30.0% | |
AAATATACATCACCTTTGCA+AGG | - | chr4.1:19426895-19426914 | MS.gene051339:intron | 30.0% | |
AAGTCGAAAACAGAAAAGAA+TGG | + | chr4.1:19426086-19426105 | None:intergenic | 30.0% | |
ACTTTGTCTACATATGATTG+TGG | + | chr4.1:19427805-19427824 | None:intergenic | 30.0% | |
AGGATCTAATTATATGGGTA+TGG | - | chr4.1:19427725-19427744 | MS.gene051339:CDS | 30.0% | |
AGTGAGATACAAGAATTAAG+AGG | + | chr4.1:19425709-19425728 | None:intergenic | 30.0% | |
CAAAAGGAAATCCAAGTTAT+TGG | + | chr4.1:19427347-19427366 | None:intergenic | 30.0% | |
CAAAATAAACTCATGTTTGC+TGG | + | chr4.1:19426027-19426046 | None:intergenic | 30.0% | |
CATATAATTAGATCCTAGTG+AGG | + | chr4.1:19427721-19427740 | None:intergenic | 30.0% | |
CCTATAAAAGTTATAGGAGT+GGG | + | chr4.1:19426783-19426802 | None:intergenic | 30.0% | |
CTCACTAGGATCTAATTATA+TGG | - | chr4.1:19427719-19427738 | MS.gene051339:CDS | 30.0% | |
TAAAATCTGTATGTTCTACC+AGG | + | chr4.1:19427874-19427893 | None:intergenic | 30.0% | |
TAGAGAACAAAAACACTGTT+TGG | + | chr4.1:19428116-19428135 | None:intergenic | 30.0% | |
TATCATATCCTGCATGTTAA+TGG | - | chr4.1:19425066-19425085 | MS.gene051339:CDS | 30.0% | |
TATTTACACCATTAACATGC+AGG | + | chr4.1:19425077-19425096 | None:intergenic | 30.0% | |
TCCTATAAAAGTTATAGGAG+TGG | + | chr4.1:19426784-19426803 | None:intergenic | 30.0% | |
TGAAAACAAGCTATAGAATG+CGG | - | chr4.1:19425769-19425788 | MS.gene051339:CDS | 30.0% | |
TGCCAAAGCTATTAAATCAT+TGG | - | chr4.1:19426691-19426710 | MS.gene051339:intron | 30.0% | |
TGCCAATGATTTAATAGCTT+TGG | + | chr4.1:19426696-19426715 | None:intergenic | 30.0% | |
TGCTTGAAAATTGTGACAAA+AGG | + | chr4.1:19427363-19427382 | None:intergenic | 30.0% | |
TGTCGCAAAATTATTGTAGA+CGG | + | chr4.1:19426510-19426529 | None:intergenic | 30.0% | |
TGTTCCTACAATCAAGTAAA+TGG | - | chr4.1:19425597-19425616 | MS.gene051339:intron | 30.0% | |
TGTTTGTAATGATTTGAGTG+TGG | - | chr4.1:19428236-19428255 | MS.gene051339:CDS | 30.0% | |
TTGGGATTCCAAAATATGAA+TGG | - | chr4.1:19424889-19424908 | MS.gene051339:CDS | 30.0% | |
TTGTTCACTGTAATTCTATC+CGG | - | chr4.1:19425822-19425841 | MS.gene051339:CDS | 30.0% | |
! | ATAACACCTTTAAGAAGATC+AGG | + | chr4.1:19425642-19425661 | None:intergenic | 30.0% |
! | ATGAAGCATATGTTTTCCTA+GGG | + | chr4.1:19428289-19428308 | None:intergenic | 30.0% |
! | CATATTTGCTAGCAAGTAAA+GGG | + | chr4.1:19425273-19425292 | None:intergenic | 30.0% |
! | CATTTTTCCAATGTTATACC+TGG | - | chr4.1:19424957-19424976 | MS.gene051339:CDS | 30.0% |
! | TAACACCTTTAAGAAGATCA+GGG | + | chr4.1:19425641-19425660 | None:intergenic | 30.0% |
!! | AACAAGTTCTAAAACTTTGC+AGG | - | chr4.1:19426862-19426881 | MS.gene051339:intron | 30.0% |
!! | AGCTAGTTAATGTGTTTTTG+AGG | - | chr4.1:19425464-19425483 | MS.gene051339:intron | 30.0% |
!! | ATTTCAAGTTTGTAGCAACT+TGG | + | chr4.1:19427501-19427520 | None:intergenic | 30.0% |
!! | GTTTTATGGCTATTTTGTGT+AGG | - | chr4.1:19425123-19425142 | MS.gene051339:CDS | 30.0% |
AAAAGATCACAAGCATTCTG+TGG | - | chr4.1:19427205-19427224 | MS.gene051339:intron | 35.0% | |
AAAGAAGCTGCAATGAGAAT+AGG | + | chr4.1:19425002-19425021 | None:intergenic | 35.0% | |
AAAGATCACAAGCATTCTGT+GGG | - | chr4.1:19427206-19427225 | MS.gene051339:intron | 35.0% | |
ACATATTTAGGGATCCAAGA+TGG | - | chr4.1:19425218-19425237 | MS.gene051339:intron | 35.0% | |
ACATTGGAAAAATGAGTTCC+TGG | + | chr4.1:19424951-19424970 | None:intergenic | 35.0% | |
ACGGCTTACAACCTAAATAA+TGG | - | chr4.1:19427586-19427605 | MS.gene051339:CDS | 35.0% | |
AGAAGTTGCAAATGTAGCTA+AGG | - | chr4.1:19427119-19427138 | MS.gene051339:intron | 35.0% | |
AGAATTATTGGAACCTTGTG+GGG | + | chr4.1:19427632-19427651 | None:intergenic | 35.0% | |
AGGATTAACATACTTCTTCC+AGG | - | chr4.1:19427075-19427094 | MS.gene051339:intron | 35.0% | |
ATATTTAGGGATCCAAGATG+GGG | - | chr4.1:19425220-19425239 | MS.gene051339:intron | 35.0% | |
ATTGTAGACGGCATTGTTAA+TGG | + | chr4.1:19426498-19426517 | None:intergenic | 35.0% | |
CAAAAACTAATTCCTCAACC+CGG | + | chr4.1:19425844-19425863 | None:intergenic | 35.0% | |
CAAACAGAACAAAGAAACAG+AGG | + | chr4.1:19424662-19424681 | None:intergenic | 35.0% | |
CAATGACCAATATGAACATG+AGG | - | chr4.1:19427827-19427846 | MS.gene051339:intron | 35.0% | |
CATATTTAGGGATCCAAGAT+GGG | - | chr4.1:19425219-19425238 | MS.gene051339:intron | 35.0% | |
CATGAGCGAAACCATTATTT+AGG | + | chr4.1:19427600-19427619 | None:intergenic | 35.0% | |
CTCAACTTTCGAGCATAAAT+TGG | - | chr4.1:19427936-19427955 | MS.gene051339:CDS | 35.0% | |
CTCATGTTCATATTGGTCAT+TGG | + | chr4.1:19427829-19427848 | None:intergenic | 35.0% | |
CTTGTTTCAAACCATAGGAA+AGG | - | chr4.1:19425031-19425050 | MS.gene051339:CDS | 35.0% | |
GAAGTTGCAAATGTAGCTAA+GGG | - | chr4.1:19427120-19427139 | MS.gene051339:intron | 35.0% | |
GAGAATTATTGGAACCTTGT+GGG | + | chr4.1:19427633-19427652 | None:intergenic | 35.0% | |
GGAAAACATATGCTTCATGT+AGG | - | chr4.1:19428291-19428310 | MS.gene051339:CDS | 35.0% | |
GGATTCCAAAATATGAATGG+TGG | - | chr4.1:19424892-19424911 | MS.gene051339:CDS | 35.0% | |
GTCGTTCAATCTTGATCTAA+TGG | - | chr4.1:19427473-19427492 | MS.gene051339:intron | 35.0% | |
GTGGCAAATGGAAACTAAAT+GGG | - | chr4.1:19425664-19425683 | MS.gene051339:intron | 35.0% | |
TCAATCACACAGCTCTTAAA+AGG | + | chr4.1:19425555-19425574 | None:intergenic | 35.0% | |
TGAATGTGTGGAAATTGTGA+CGG | - | chr4.1:19427567-19427586 | MS.gene051339:CDS | 35.0% | |
TGAGAATTATTGGAACCTTG+TGG | + | chr4.1:19427634-19427653 | None:intergenic | 35.0% | |
TGTTCACTGTAATTCTATCC+GGG | - | chr4.1:19425823-19425842 | MS.gene051339:CDS | 35.0% | |
TTCAAACCATAGGAAAGGTA+AGG | - | chr4.1:19425036-19425055 | MS.gene051339:CDS | 35.0% | |
TTGCTAAATGCATGAATGTG+TGG | - | chr4.1:19427555-19427574 | MS.gene051339:CDS | 35.0% | |
TTTAAGAGCTGTGTGATTGA+TGG | - | chr4.1:19425555-19425574 | MS.gene051339:intron | 35.0% | |
TTTACCTGCTAGAATAGACT+TGG | + | chr4.1:19426234-19426253 | None:intergenic | 35.0% | |
! | ATACATTACCACAGCATTGA+AGG | + | chr4.1:19425422-19425441 | None:intergenic | 35.0% |
! | ATCAAGCGACTTACATTTTG+AGG | + | chr4.1:19428016-19428035 | None:intergenic | 35.0% |
! | ATTGGTTAAAGCACCACAAT+TGG | - | chr4.1:19427954-19427973 | MS.gene051339:CDS | 35.0% |
! | CATGAAGCATATGTTTTCCT+AGG | + | chr4.1:19428290-19428309 | None:intergenic | 35.0% |
! | CATTTAGTTTCCATTTGCCA+CGG | + | chr4.1:19425665-19425684 | None:intergenic | 35.0% |
! | CCCACTCCTATAACTTTTAT+AGG | - | chr4.1:19426780-19426799 | MS.gene051339:CDS | 35.0% |
! | CTTTCCTATGGTTTGAAACA+AGG | + | chr4.1:19425033-19425052 | None:intergenic | 35.0% |
! | GCATATTTGCTAGCAAGTAA+AGG | + | chr4.1:19425274-19425293 | None:intergenic | 35.0% |
! | TCAGACCACCATTCATATTT+TGG | + | chr4.1:19424900-19424919 | None:intergenic | 35.0% |
! | TTGAACTGTGGAAGTTTTCT+TGG | - | chr4.1:19426425-19426444 | MS.gene051339:CDS | 35.0% |
!! | TATGATGTTGATGACTGGAA+AGG | - | chr4.1:19425382-19425401 | MS.gene051339:intron | 35.0% |
!! | TTAATAGCTTTGGCATTCAG+AGG | + | chr4.1:19426686-19426705 | None:intergenic | 35.0% |
!! | TTATGGCTATTTTGTGTAGG+TGG | - | chr4.1:19425126-19425145 | MS.gene051339:CDS | 35.0% |
AAAGGAACAGACACCAATTG+TGG | + | chr4.1:19427970-19427989 | None:intergenic | 40.0% | |
AAGCAACCTTATGGAAACCT+TGG | - | chr4.1:19426566-19426585 | MS.gene051339:intron | 40.0% | |
AAGGTTGACATTGCAAGAGA+AGG | - | chr4.1:19424827-19424846 | MS.gene051339:CDS | 40.0% | |
AATTATTGGAACCTTGTGGG+GGG | + | chr4.1:19427630-19427649 | None:intergenic | 40.0% | |
ACAGGATTGGATTTGAACTG+TGG | - | chr4.1:19426413-19426432 | MS.gene051339:CDS | 40.0% | |
ACCTCAGGATCAAGAACAAA+GGG | - | chr4.1:19428076-19428095 | MS.gene051339:CDS | 40.0% | |
ACCTTCGTAGTTTCCAATCA+TGG | + | chr4.1:19426750-19426769 | None:intergenic | 40.0% | |
ACTGTCTTCTCATTTGGAGA+TGG | - | chr4.1:19427904-19427923 | MS.gene051339:intron | 40.0% | |
AGAAATTGAGTGTGGATGCA+AGG | - | chr4.1:19424787-19424806 | MS.gene051339:CDS | 40.0% | |
ATCACACAGCTCTTAAAAGG+TGG | + | chr4.1:19425552-19425571 | None:intergenic | 40.0% | |
ATGCAGTAAGACGAAGTTGT+TGG | - | chr4.1:19427390-19427409 | MS.gene051339:CDS | 40.0% | |
ATGCGTCTAGGTTTCTTTGA+TGG | - | chr4.1:19426533-19426552 | MS.gene051339:intron | 40.0% | |
ATTCTTGCCATAATGTCTGG+AGG | - | chr4.1:19427150-19427169 | MS.gene051339:intron | 40.0% | |
CAAACATGATCCTCAGCTAA+AGG | + | chr4.1:19427988-19428007 | None:intergenic | 40.0% | |
CATCAACAGCAGAATTCACA+AGG | + | chr4.1:19424860-19424879 | None:intergenic | 40.0% | |
CCATAGCTGATGTCATCTTT+GGG | - | chr4.1:19427259-19427278 | MS.gene051339:intron | 40.0% | |
CGTGGCAAATGGAAACTAAA+TGG | - | chr4.1:19425663-19425682 | MS.gene051339:intron | 40.0% | |
CTGCAACAAGAAATTGAGTG+TGG | - | chr4.1:19424779-19424798 | MS.gene051339:CDS | 40.0% | |
CTGTTGATGTAAGCAGACTT+GGG | - | chr4.1:19424871-19424890 | MS.gene051339:CDS | 40.0% | |
CTTCATGGAGTCTCTAACAT+TGG | - | chr4.1:19424924-19424943 | MS.gene051339:CDS | 40.0% | |
GAAATTGAGTGTGGATGCAA+GGG | - | chr4.1:19424788-19424807 | MS.gene051339:CDS | 40.0% | |
GAATTATTGGAACCTTGTGG+GGG | + | chr4.1:19427631-19427650 | None:intergenic | 40.0% | |
GACATTATGGCAAGAATCAC+AGG | + | chr4.1:19427147-19427166 | None:intergenic | 40.0% | |
GAGAAACCTTACCTTTCCTA+TGG | + | chr4.1:19425045-19425064 | None:intergenic | 40.0% | |
GAGAATAGGCATAGGAAAAC+TGG | + | chr4.1:19424988-19425007 | None:intergenic | 40.0% | |
GATCCTGAGGTGAATATCAA+AGG | + | chr4.1:19428067-19428086 | None:intergenic | 40.0% | |
GATCTTGATCTAATGGCTTC+AGG | - | chr4.1:19427532-19427551 | MS.gene051339:CDS | 40.0% | |
GATTGTGGATACCATGTCAT+GGG | + | chr4.1:19427790-19427809 | None:intergenic | 40.0% | |
GCCATTAGATCAAGATCGAA+CGG | + | chr4.1:19427529-19427548 | None:intergenic | 40.0% | |
GGTCTACAACAAACTGATGA+TGG | - | chr4.1:19425310-19425329 | MS.gene051339:intron | 40.0% | |
GTGATTCTTGCCATAATGTC+TGG | - | chr4.1:19427147-19427166 | MS.gene051339:intron | 40.0% | |
TAGCCTTTGATATTCACCTC+AGG | - | chr4.1:19428061-19428080 | MS.gene051339:CDS | 40.0% | |
TGACAGCACCTTCTGTATAT+CGG | + | chr4.1:19426451-19426470 | None:intergenic | 40.0% | |
TGATTGTGGATACCATGTCA+TGG | + | chr4.1:19427791-19427810 | None:intergenic | 40.0% | |
TGGAGATTCCAACAAGCTTA+AGG | - | chr4.1:19425330-19425349 | MS.gene051339:intron | 40.0% | |
TGTAAGTCGCTTGATGTTGT+TGG | - | chr4.1:19428021-19428040 | MS.gene051339:CDS | 40.0% | |
TTGACATTGCAAGAGAAGGT+TGG | - | chr4.1:19424831-19424850 | MS.gene051339:CDS | 40.0% | |
TTGCTAGCAAATATGCAGCA+GGG | - | chr4.1:19425278-19425297 | MS.gene051339:intron | 40.0% | |
TTTCCATAAGGTTGCTTGCT+AGG | + | chr4.1:19426563-19426582 | None:intergenic | 40.0% | |
TTTCTTGGCCGATATACAGA+AGG | - | chr4.1:19426440-19426459 | MS.gene051339:CDS | 40.0% | |
TTTGCGACATTAATGCGTCT+AGG | - | chr4.1:19426521-19426540 | MS.gene051339:CDS | 40.0% | |
TTTGGACCAAGGTTTCCATA+AGG | + | chr4.1:19426575-19426594 | None:intergenic | 40.0% | |
! | AAAGCCAACAAGTGTTTCTG+AGG | + | chr4.1:19428162-19428181 | None:intergenic | 40.0% |
! | AGGTGTTCTGTTTTCAACAG+AGG | + | chr4.1:19424625-19424644 | None:intergenic | 40.0% |
! | GCTTCCTTGTTTCAAACCAT+AGG | - | chr4.1:19425026-19425045 | MS.gene051339:CDS | 40.0% |
! | GTCAGTGAGATTGACTTACT+TGG | + | chr4.1:19427294-19427313 | None:intergenic | 40.0% |
! | TTCGAGAAAGTACACTTGAC+AGG | - | chr4.1:19428180-19428199 | MS.gene051339:CDS | 40.0% |
! | TTTTGTGTAGGTGGTTTCGA+CGG | - | chr4.1:19425135-19425154 | MS.gene051339:CDS | 40.0% |
!! | AATCCAGCATTGGCGAATTA+CGG | - | chr4.1:19424753-19424772 | MS.gene051339:CDS | 40.0% |
!! | ATTTGCACCGACTACAATCA+CGG | + | chr4.1:19427028-19427047 | None:intergenic | 40.0% |
!! | CAGCATATGATGTTGATGAC+TGG | - | chr4.1:19425377-19425396 | MS.gene051339:intron | 40.0% |
!! | CTTCTTAAAGGTGTTATCCG+TGG | - | chr4.1:19425645-19425664 | MS.gene051339:intron | 40.0% |
!! | GGTTGGCTGGTTTAACATAT+TGG | - | chr4.1:19425182-19425201 | MS.gene051339:intron | 40.0% |
!! | GTGTTGCTTAAAAACTGTGC+AGG | - | chr4.1:19426653-19426672 | MS.gene051339:intron | 40.0% |
!! | TTGAGTGTGGTTGATGAACT+TGG | - | chr4.1:19428249-19428268 | MS.gene051339:CDS | 40.0% |
AATGCTACTAGGGCCATGAT+TGG | - | chr4.1:19426734-19426753 | MS.gene051339:CDS | 45.0% | |
ACCACAACTCAGCAAAAGTG+TGG | + | chr4.1:19424685-19424704 | None:intergenic | 45.0% | |
AGCAAAGCTTGTGGGAACTA+AGG | + | chr4.1:19426929-19426948 | None:intergenic | 45.0% | |
AGCAGCAACCTTAAGCTTGT+TGG | + | chr4.1:19425341-19425360 | None:intergenic | 45.0% | |
AGGCGAAAACTGCAGATGTT+TGG | + | chr4.1:19424719-19424738 | None:intergenic | 45.0% | |
ATAGGAAAACTGGTTGCTCC+AGG | + | chr4.1:19424978-19424997 | None:intergenic | 45.0% | |
ATATGCTCAGTGACCTCACT+AGG | - | chr4.1:19427705-19427724 | MS.gene051339:CDS | 45.0% | |
ATCACAAGCATTCTGTGGGT+TGG | - | chr4.1:19427210-19427229 | MS.gene051339:intron | 45.0% | |
ATCCGGCCTCATGTTCATAT+TGG | + | chr4.1:19427836-19427855 | None:intergenic | 45.0% | |
ATTCGCCAATGCTGGATTCT+TGG | + | chr4.1:19424751-19424770 | None:intergenic | 45.0% | |
CACAGCTCTTAAAAGGTGGT+TGG | + | chr4.1:19425548-19425567 | None:intergenic | 45.0% | |
CACCTCAGGATCAAGAACAA+AGG | - | chr4.1:19428075-19428094 | MS.gene051339:CDS | 45.0% | |
CAGAGGAAAACAGAGACGTT+AGG | + | chr4.1:19424645-19424664 | None:intergenic | 45.0% | |
CCCAAAGATGACATCAGCTA+TGG | + | chr4.1:19427262-19427281 | None:intergenic | 45.0% | |
CGGTGCAAATCTTGCAATAG+AGG | - | chr4.1:19427038-19427057 | MS.gene051339:intron | 45.0% | |
CTGTAATTCTATCCGGGTTG+AGG | - | chr4.1:19425829-19425848 | MS.gene051339:CDS | 45.0% | |
CTTGCTAGCAAATATGCAGC+AGG | - | chr4.1:19425277-19425296 | MS.gene051339:intron | 45.0% | |
GACCAATATGAACATGAGGC+CGG | - | chr4.1:19427831-19427850 | MS.gene051339:intron | 45.0% | |
GATCCTAGCAAGCAACCTTA+TGG | - | chr4.1:19426557-19426576 | MS.gene051339:intron | 45.0% | |
GATGCAACCGTGATTGTAGT+CGG | - | chr4.1:19427018-19427037 | MS.gene051339:intron | 45.0% | |
GCAATGTCAACCTTCTCACA+AGG | + | chr4.1:19424821-19424840 | None:intergenic | 45.0% | |
GCCATAGCTGATGTCATCTT+TGG | - | chr4.1:19427258-19427277 | MS.gene051339:intron | 45.0% | |
GCCATGATTGGAAACTACGA+AGG | - | chr4.1:19426746-19426765 | MS.gene051339:CDS | 45.0% | |
GCCCAATGCTAATGCTACTA+GGG | - | chr4.1:19426724-19426743 | MS.gene051339:CDS | 45.0% | |
GCCCTAGTAGCATTAGCATT+GGG | + | chr4.1:19426728-19426747 | None:intergenic | 45.0% | |
GCCGTTCGATCTTGATCTAA+TGG | - | chr4.1:19427525-19427544 | MS.gene051339:intron | 45.0% | |
GCTGACCCTGATCTTCTTAA+AGG | - | chr4.1:19425633-19425652 | MS.gene051339:intron | 45.0% | |
GCTGCAATGAGAATAGGCAT+AGG | + | chr4.1:19424996-19425015 | None:intergenic | 45.0% | |
GCTGTTGATGTAAGCAGACT+TGG | - | chr4.1:19424870-19424889 | MS.gene051339:CDS | 45.0% | |
GGGGAAACTGTCTTCTCATT+TGG | - | chr4.1:19427898-19427917 | MS.gene051339:intron | 45.0% | |
GGTTGCTCCAGGTATAACAT+TGG | + | chr4.1:19424967-19424986 | None:intergenic | 45.0% | |
TCCCTTTGTTCTTGATCCTG+AGG | + | chr4.1:19428080-19428099 | None:intergenic | 45.0% | |
TGCACCTCAGAAACACTTGT+TGG | - | chr4.1:19428155-19428174 | MS.gene051339:CDS | 45.0% | |
TGTTGCCAAGAATCCAGCAT+TGG | - | chr4.1:19424743-19424762 | MS.gene051339:CDS | 45.0% | |
TTGTGGGAACTAAGGCTGTT+AGG | + | chr4.1:19426921-19426940 | None:intergenic | 45.0% | |
! | AAGGTGTTATCCGTGGCAAA+TGG | - | chr4.1:19425652-19425671 | MS.gene051339:intron | 45.0% |
! | GACAGGAAAATCAGAAGCAC+TGG | - | chr4.1:19428197-19428216 | MS.gene051339:CDS | 45.0% |
! | GCATTGGTGCATTGAACATC+AGG | + | chr4.1:19426961-19426980 | None:intergenic | 45.0% |
! | GCTGAAGTGCAGACATCTTT+TGG | + | chr4.1:19426593-19426612 | None:intergenic | 45.0% |
! | TGCAGACATCTTTTGGACCA+AGG | + | chr4.1:19426586-19426605 | None:intergenic | 45.0% |
! | TGCTGAGGCTGCAATCTTTT+TGG | + | chr4.1:19426998-19427017 | None:intergenic | 45.0% |
!! | ATCCAGCATTGGCGAATTAC+GGG | - | chr4.1:19424754-19424773 | MS.gene051339:CDS | 45.0% |
AACCCGTAATTCGCCAATGC+TGG | + | chr4.1:19424759-19424778 | None:intergenic | 50.0% | |
AAGGCTGTTAGGCCTTGCAA+AGG | + | chr4.1:19426910-19426929 | None:intergenic | 50.0% | |
AATCACGGTTGCATCTGCTG+AGG | + | chr4.1:19427013-19427032 | None:intergenic | 50.0% | |
ACATTACACCAAGACCCCTG+AGG | - | chr4.1:19426199-19426218 | MS.gene051339:CDS | 50.0% | |
ACTAACTGTTGCTGCTGTCC+TGG | + | chr4.1:19427096-19427115 | None:intergenic | 50.0% | |
AGATCAGGGTCAGCACAAGT+CGG | + | chr4.1:19425627-19425646 | None:intergenic | 50.0% | |
CAAGAGCAATGCACAACGTC+GGG | - | chr4.1:19425161-19425180 | MS.gene051339:CDS | 50.0% | |
CATAATGTCTGGAGGAGGCA+TGG | - | chr4.1:19427158-19427177 | MS.gene051339:intron | 50.0% | |
CATGAAAATTGCCCCCCACA+AGG | - | chr4.1:19427616-19427635 | MS.gene051339:CDS | 50.0% | |
CATGCCTCCTCCAGACATTA+TGG | + | chr4.1:19427160-19427179 | None:intergenic | 50.0% | |
CTTGCCATAATGTCTGGAGG+AGG | - | chr4.1:19427153-19427172 | MS.gene051339:intron | 50.0% | |
GCAAGAGCAATGCACAACGT+CGG | - | chr4.1:19425160-19425179 | MS.gene051339:CDS | 50.0% | |
GCAAGTAAAGGGTCTTCTCC+TGG | + | chr4.1:19425262-19425281 | None:intergenic | 50.0% | |
GCAGCCAAGTCTATTCTAGC+AGG | - | chr4.1:19426227-19426246 | MS.gene051339:CDS | 50.0% | |
GCGTTACACCTTCAATGCTG+TGG | - | chr4.1:19425411-19425430 | MS.gene051339:intron | 50.0% | |
GCTGTCAAGCAAGGGCTTAT+AGG | - | chr4.1:19426464-19426483 | MS.gene051339:CDS | 50.0% | |
GGAAGAGGTCAAGAAACACC+AGG | - | chr4.1:19425241-19425260 | MS.gene051339:intron | 50.0% | |
GGAGTCTCTAACATTGGTCC+AGG | - | chr4.1:19424930-19424949 | MS.gene051339:CDS | 50.0% | |
GGCAACAGAAAAGTTGCCCT+AGG | - | chr4.1:19428270-19428289 | MS.gene051339:CDS | 50.0% | |
GGCCCAATGCTAATGCTACT+AGG | - | chr4.1:19426723-19426742 | MS.gene051339:CDS | 50.0% | |
GGCCCTAGTAGCATTAGCAT+TGG | + | chr4.1:19426729-19426748 | None:intergenic | 50.0% | |
GGGTGAAAGACCTTGTGAGA+AGG | - | chr4.1:19424808-19424827 | MS.gene051339:CDS | 50.0% | |
GGTGTCTGTTCCTTTAGCTG+AGG | - | chr4.1:19427975-19427994 | MS.gene051339:CDS | 50.0% | |
TAGAGGCAGAGAGTCATGAC+AGG | - | chr4.1:19427055-19427074 | MS.gene051339:intron | 50.0% | |
TATGCAGCAGGGTACGTGAA+AGG | - | chr4.1:19425289-19425308 | MS.gene051339:intron | 50.0% | |
TCTTGACCTCTTCCCCATCT+TGG | + | chr4.1:19425235-19425254 | None:intergenic | 50.0% | |
TGGATTCTTGGCAACATCGC+AGG | + | chr4.1:19424739-19424758 | None:intergenic | 50.0% | |
TGTCTGCACTTCAGCAAACC+AGG | - | chr4.1:19426598-19426617 | MS.gene051339:intron | 50.0% | |
! | GCCACACTTTTGCTGAGTTG+TGG | - | chr4.1:19424681-19424700 | MS.gene051339:CDS | 50.0% |
! | TGGTGGTCTGAAGCACTTCA+TGG | - | chr4.1:19424909-19424928 | MS.gene051339:CDS | 50.0% |
!! | ACAGAAGGTGCTGTCAAGCA+AGG | - | chr4.1:19426455-19426474 | MS.gene051339:CDS | 50.0% |
!! | ATTCTGTGGGTTGGCTATCC+TGG | - | chr4.1:19427219-19427238 | MS.gene051339:intron | 50.0% |
!! | CAGAAGGTGCTGTCAAGCAA+GGG | - | chr4.1:19426456-19426475 | MS.gene051339:CDS | 50.0% |
ACAGCCAGCAGCAAAGCTTG+TGG | + | chr4.1:19426938-19426957 | None:intergenic | 55.0% | |
ACTTGGCTGCAGCTTCCTCA+GGG | + | chr4.1:19426217-19426236 | None:intergenic | 55.0% | |
AGCAATGCACAACGTCGGGT+TGG | - | chr4.1:19425165-19425184 | MS.gene051339:intron | 55.0% | |
AGCTAGCTCGTGAAGCTGCA+AGG | - | chr4.1:19426621-19426640 | MS.gene051339:intron | 55.0% | |
AGGGATCCAAGATGGGGAAG+AGG | - | chr4.1:19425226-19425245 | MS.gene051339:intron | 55.0% | |
CAGCCAGCAGCAAAGCTTGT+GGG | + | chr4.1:19426937-19426956 | None:intergenic | 55.0% | |
CTCGTGAAGCTGCAAGGCAA+GGG | - | chr4.1:19426627-19426646 | MS.gene051339:intron | 55.0% | |
GGCATCGTCTAGTGCAGCAT+TGG | + | chr4.1:19426977-19426996 | None:intergenic | 55.0% | |
GTGGAAGGCTACCCATGACA+TGG | - | chr4.1:19427776-19427795 | MS.gene051339:CDS | 55.0% | |
GTTCCCACAAGCTTTGCTGC+TGG | - | chr4.1:19426931-19426950 | MS.gene051339:intron | 55.0% | |
GTTGGCTATCCTGGAGAAGC+TGG | - | chr4.1:19427228-19427247 | MS.gene051339:intron | 55.0% | |
TGAGGTGCATTGTGCACTGC+AGG | + | chr4.1:19428144-19428163 | None:intergenic | 55.0% | |
ATGAGGCCGGATCCTGCTAC+AGG | - | chr4.1:19427844-19427863 | MS.gene051339:intron | 60.0% | |
CAGCTTCACGAGCTAGCTCC+TGG | + | chr4.1:19426619-19426638 | None:intergenic | 60.0% | |
CTACCAGGGTAGCCTGTAGC+AGG | + | chr4.1:19427859-19427878 | None:intergenic | 60.0% | |
CTTGGCTGCAGCTTCCTCAG+GGG | + | chr4.1:19426216-19426235 | None:intergenic | 60.0% | |
GACTTGGCTGCAGCTTCCTC+AGG | + | chr4.1:19426218-19426237 | None:intergenic | 60.0% | |
GATCCTGCTACAGGCTACCC+TGG | - | chr4.1:19427853-19427872 | MS.gene051339:intron | 60.0% | |
GCTCGTGAAGCTGCAAGGCA+AGG | - | chr4.1:19426626-19426645 | MS.gene051339:intron | 60.0% | |
GGCTATCCTGGAGAAGCTGG+TGG | - | chr4.1:19427231-19427250 | MS.gene051339:intron | 60.0% | |
GGGTAGCCTGTAGCAGGATC+CGG | + | chr4.1:19427853-19427872 | None:intergenic | 60.0% | |
GGTGCATTGTGCACTGCAGG+AGG | + | chr4.1:19428141-19428160 | None:intergenic | 60.0% | |
TGCAGCTTCCTCAGGGGTCT+TGG | + | chr4.1:19426210-19426229 | None:intergenic | 60.0% | |
!! | ATGCACAACGTCGGGTTGGC+TGG | - | chr4.1:19425169-19425188 | MS.gene051339:intron | 60.0% |
GCAGCTCCACCAGCTTCTCC+AGG | + | chr4.1:19427240-19427259 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 19424612 | 19428347 | 19424612 | ID=MS.gene051339 |
chr4.1 | mRNA | 19424612 | 19428347 | 19424612 | ID=MS.gene051339.t1;Parent=MS.gene051339 |
chr4.1 | exon | 19427907 | 19428347 | 19427907 | ID=MS.gene051339.t1.exon1;Parent=MS.gene051339.t1 |
chr4.1 | CDS | 19427907 | 19428347 | 19427907 | ID=cds.MS.gene051339.t1;Parent=MS.gene051339.t1 |
chr4.1 | exon | 19427527 | 19427814 | 19427527 | ID=MS.gene051339.t1.exon2;Parent=MS.gene051339.t1 |
chr4.1 | CDS | 19427527 | 19427814 | 19427527 | ID=cds.MS.gene051339.t1;Parent=MS.gene051339.t1 |
chr4.1 | exon | 19427274 | 19427443 | 19427274 | ID=MS.gene051339.t1.exon3;Parent=MS.gene051339.t1 |
chr4.1 | CDS | 19427274 | 19427443 | 19427274 | ID=cds.MS.gene051339.t1;Parent=MS.gene051339.t1 |
chr4.1 | exon | 19426711 | 19426808 | 19426711 | ID=MS.gene051339.t1.exon4;Parent=MS.gene051339.t1 |
chr4.1 | CDS | 19426711 | 19426808 | 19426711 | ID=cds.MS.gene051339.t1;Parent=MS.gene051339.t1 |
chr4.1 | exon | 19426192 | 19426542 | 19426192 | ID=MS.gene051339.t1.exon5;Parent=MS.gene051339.t1 |
chr4.1 | CDS | 19426192 | 19426542 | 19426192 | ID=cds.MS.gene051339.t1;Parent=MS.gene051339.t1 |
chr4.1 | exon | 19425665 | 19426075 | 19425665 | ID=MS.gene051339.t1.exon6;Parent=MS.gene051339.t1 |
chr4.1 | CDS | 19425665 | 19426075 | 19425665 | ID=cds.MS.gene051339.t1;Parent=MS.gene051339.t1 |
chr4.1 | exon | 19424612 | 19425183 | 19424612 | ID=MS.gene051339.t1.exon7;Parent=MS.gene051339.t1 |
chr4.1 | CDS | 19424612 | 19425183 | 19424612 | ID=cds.MS.gene051339.t1;Parent=MS.gene051339.t1 |
Gene Sequence |
Protein sequence |