AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene010244

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene010244.t1 MTR_5g062320 95.769 780 32 1 1 779 1 780 0.0 1519
MS.gene010244.t1 MTR_5g062370 94.373 782 41 1 1 779 1 782 0.0 1509
MS.gene010244.t1 MTR_5g062430 90.409 782 72 1 1 779 1 782 0.0 1446
MS.gene010244.t1 MTR_5g062650 83.567 785 123 3 1 779 1 785 0.0 1338
MS.gene010244.t1 MTR_3g074060 69.806 775 225 4 6 779 10 776 0.0 1164
MS.gene010244.t1 MTR_5g062370 94.549 587 29 1 1 584 1 587 0.0 1153
MS.gene010244.t1 MTR_5g030860 48.125 800 373 12 1 779 4 782 0.0 768
MS.gene010244.t1 MTR_1g106860 49.667 751 361 12 27 769 18 759 0.0 744
MS.gene010244.t1 MTR_2g008240 48.545 756 360 12 33 779 40 775 0.0 729
MS.gene010244.t1 MTR_1g087240 46.272 778 388 10 5 777 3 755 0.0 722
MS.gene010244.t1 MTR_7g109390 47.012 753 372 12 33 777 28 761 0.0 721
MS.gene010244.t1 MTR_2g034720 47.137 751 370 12 32 777 26 754 0.0 716
MS.gene010244.t1 MTR_4g094285 46.488 783 391 13 5 779 12 774 0.0 714
MS.gene010244.t1 MTR_6g028090 27.736 667 355 29 35 635 16 621 2.39e-42 164
MS.gene010244.t1 MTR_6g028120 28.158 657 345 30 45 635 7 602 7.06e-42 162
MS.gene010244.t1 MTR_3g079750 27.711 664 355 30 37 635 18 621 7.66e-41 159
MS.gene010244.t1 MTR_2g030000 28.317 618 342 26 54 610 37 614 1.92e-40 159
MS.gene010244.t1 MTR_3g462820 27.197 603 347 23 47 592 22 589 6.25e-40 156
MS.gene010244.t1 MTR_6g028110 26.347 668 375 29 33 639 15 626 3.38e-39 154
MS.gene010244.t1 MTR_6g028100 27.372 643 350 29 54 635 35 621 3.87e-39 154
MS.gene010244.t1 MTR_6g028110 26.198 668 376 28 33 639 15 626 5.42e-39 154
MS.gene010244.t1 MTR_7g086030 27.560 664 336 30 47 635 4 597 3.92e-38 151
MS.gene010244.t1 MTR_7g086030 27.560 664 336 30 47 635 29 622 5.63e-38 151
MS.gene010244.t1 MTR_5g069800 25.871 603 352 23 49 592 7 573 5.25e-36 144
MS.gene010244.t1 MTR_5g069740 26.465 529 317 20 83 592 86 561 1.12e-32 134
MS.gene010244.t1 MTR_7g086010 28.997 369 209 18 83 433 119 452 1.04e-23 105
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene010244.t1 AT1G78060 62.899 752 268 7 32 779 23 767 0.0 1002
MS.gene010244.t1 AT5G10560 50.526 760 350 8 40 777 35 790 0.0 783
MS.gene010244.t1 AT3G19620 50.602 747 344 14 33 769 27 758 0.0 755
MS.gene010244.t1 AT5G09730 47.893 783 387 14 2 779 7 773 0.0 728
MS.gene010244.t1 AT5G64570 47.832 784 381 13 5 779 20 784 0.0 722
MS.gene010244.t1 AT1G02640 46.008 789 381 13 1 777 3 758 0.0 717
MS.gene010244.t1 AT5G49360 47.059 782 379 17 6 777 14 770 0.0 702
MS.gene010244.t1 AT5G64570 51.282 585 271 9 5 587 20 592 0.0 600
MS.gene010244.t1 AT5G64570 47.738 641 312 11 147 779 1 626 0.0 591
MS.gene010244.t1 AT5G09700 44.172 489 260 7 297 779 45 526 1.68e-132 404
MS.gene010244.t1 AT3G47040 26.348 649 370 27 47 638 10 607 1.49e-40 158
MS.gene010244.t1 AT3G47000 26.100 659 353 28 47 635 10 604 1.07e-39 155
MS.gene010244.t1 AT5G04885 26.324 623 357 26 53 614 36 617 1.34e-38 153
MS.gene010244.t1 AT5G04885 26.324 623 357 26 53 614 36 617 1.34e-38 153
MS.gene010244.t1 AT5G04885 26.324 623 357 26 53 614 53 634 1.60e-38 153
MS.gene010244.t1 AT3G47010 26.645 623 361 28 47 610 11 596 6.29e-38 150
MS.gene010244.t1 AT3G47040 25.487 667 378 29 47 638 10 632 7.28e-38 150
MS.gene010244.t1 AT3G47050 26.829 615 345 27 43 594 6 578 6.34e-37 147
MS.gene010244.t1 AT3G47010 26.400 625 359 30 47 610 11 595 3.21e-36 145
MS.gene010244.t1 AT3G62710 27.023 618 335 29 59 634 105 648 5.11e-33 136
MS.gene010244.t1 AT5G20950 28.738 428 206 18 57 421 36 427 7.24e-32 132
MS.gene010244.t1 AT5G20950 28.738 428 206 18 57 421 36 427 7.24e-32 132
MS.gene010244.t1 AT5G20950 28.738 428 206 18 57 421 114 505 1.18e-31 132
MS.gene010244.t1 AT5G20940 28.271 428 233 18 57 433 42 446 6.50e-31 129
MS.gene010244.t1 AT3G47000 28.802 434 219 18 47 421 10 412 6.66e-31 127
MS.gene010244.t1 AT3G47040 29.263 434 242 17 47 433 10 425 1.78e-30 125
MS.gene010244.t1 AT3G47040 24.484 678 379 31 47 638 10 640 6.63e-29 123
MS.gene010244.t1 AT3G47010 27.854 438 243 20 47 433 11 426 6.51e-28 118
MS.gene010244.t1 AT3G47000 25.800 469 280 21 191 635 3 427 8.33e-26 111
MS.gene010244.t1 AT3G47010 26.292 445 269 22 193 610 5 417 2.64e-25 110
MS.gene010244.t1 AT3G47050 26.984 378 212 15 43 374 6 365 4.23e-22 99.8

Find 195 sgRNAs with CRISPR-Local

Find 382 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGAACTATTGATGATTTAT+TGG 0.145046 5.1:+48092766 None:intergenic
CACCAAACATAAACATATTT+AGG 0.152169 5.1:-48095302 MS.gene010244:CDS
AATAAGTGATTATGTTATTT+TGG 0.156153 5.1:-48092594 MS.gene010244:CDS
TTCTAAGAAGCCTGTTATTT+TGG 0.174390 5.1:-48092471 MS.gene010244:CDS
CTGCCTATGATTTGGAAAAT+TGG 0.179123 5.1:-48095119 MS.gene010244:CDS
GCTAAGAATAATGACAAAAT+TGG 0.212120 5.1:-48092413 MS.gene010244:CDS
TTTCCATTTCTACCTTTCTT+TGG 0.223144 5.1:+48091090 None:intergenic
TTTGAAGGTGGGAAACTAAT+TGG 0.240728 5.1:-48095180 MS.gene010244:CDS
TCAGGTTACTTTACAAGATT+TGG 0.243170 5.1:-48094676 MS.gene010244:intron
TTGATGATTTATTGGCATTA+GGG 0.250324 5.1:+48092774 None:intergenic
AAGCTCAAGGGATGACGTTT+TGG 0.256760 5.1:-48095326 MS.gene010244:CDS
AAACAAGTATCCATATTAAA+AGG 0.276787 5.1:-48092716 MS.gene010244:CDS
ACACTTTACTGCCTATGATT+TGG 0.277559 5.1:-48095127 MS.gene010244:CDS
AAGTAATGGTGATGGAAAAT+TGG 0.278252 5.1:+48096292 None:intergenic
TCTTGTCCTCTTCCCCATCT+TGG 0.278328 5.1:+48095276 None:intergenic
GTAAATACCCTTGGAGTTAT+AGG 0.279725 5.1:-48092797 MS.gene010244:CDS
ACAAAATTGGAGGCATCATT+TGG 0.281644 5.1:-48092400 MS.gene010244:CDS
ACTGATTCGGTACCAAAGTT+TGG 0.290827 5.1:+48095909 None:intergenic
ATTGATGATTTATTGGCATT+AGG 0.294469 5.1:+48092773 None:intergenic
TGTGCTTACAACCGTGTTAA+TGG 0.296603 5.1:-48094591 MS.gene010244:CDS
TCTTTAGAGCATACTTGATT+TGG 0.301730 5.1:+48092902 None:intergenic
AATTCTGCCATATTGAAGTT+TGG 0.332874 5.1:+48092928 None:intergenic
GGAGGTGGAAAGGGTGAAGT+TGG 0.339877 5.1:-48091024 MS.gene010244:CDS
TACAAACTTGTTTCAGAGTT+AGG 0.340365 5.1:-48091210 MS.gene010244:CDS
AAACTTCAATATGGCAGAAT+TGG 0.347201 5.1:-48092926 MS.gene010244:CDS
CACAAAATTACCAAAATAAC+AGG 0.354358 5.1:+48092461 None:intergenic
CTGATTCGGTACCAAAGTTT+GGG 0.355066 5.1:+48095910 None:intergenic
CCTTTGGTAAATTCAAAGTA+TGG 0.359897 5.1:-48095237 MS.gene010244:CDS
ACATTGGGAATTACAAATAC+TGG 0.364595 5.1:-48091153 MS.gene010244:CDS
CGGTGTTTCTTATGTTGGTA+AGG 0.366894 5.1:-48096007 MS.gene010244:CDS
CATGTCCATTTCTGTAACAT+TGG 0.372834 5.1:-48091169 MS.gene010244:CDS
GGCACGGTCAATTTGAGATA+TGG 0.377737 5.1:+48093006 None:intergenic
AGCCAGACACATTATCGTTC+TGG 0.377925 5.1:-48092677 MS.gene010244:CDS
ATCATTTGGGCTGGTTATCC+TGG 0.383440 5.1:-48092386 MS.gene010244:CDS
GCTGGTTATCCTGGTGAAAC+TGG 0.384326 5.1:-48092377 MS.gene010244:CDS
CTTCAAGGAGATTCCTTTGA+AGG 0.385860 5.1:-48095195 MS.gene010244:CDS
GGTCCAAAGGTCTACGAATT+CGG 0.387773 5.1:-48091348 MS.gene010244:CDS
TTTGACGGAAATGAAGTTGT+AGG 0.388452 5.1:+48091299 None:intergenic
ACAAATACTGGAAGCATGGC+TGG 0.392102 5.1:-48091141 MS.gene010244:CDS
AATTCCCAATGTTACAGAAA+TGG 0.398418 5.1:+48091164 None:intergenic
ACCAAACATAAACATATTTA+GGG 0.398770 5.1:-48095301 MS.gene010244:CDS
AGATTGTAATCTGCACAGTT+TGG 0.398988 5.1:+48094564 None:intergenic
AATCCAACCAAACTTCAATA+TGG 0.399490 5.1:-48092935 MS.gene010244:CDS
TGGTGGAAGGGCTCTGGCTC+AGG 0.399913 5.1:-48092357 MS.gene010244:CDS
TCCCTAAATATGTTTATGTT+TGG 0.400093 5.1:+48095300 None:intergenic
AGGAATAATTTGAGAAGCTT+AGG 0.401616 5.1:+48091319 None:intergenic
CAAACCTAGTCTTATTCTAA+TGG 0.402033 5.1:+48092967 None:intergenic
GCTCTGGCTCAGGTTGTGTT+TGG 0.406314 5.1:-48092347 MS.gene010244:CDS
TAGCCGAATTCGTAGACCTT+TGG 0.407677 5.1:+48091345 None:intergenic
ATAAGACTAGGTTTGTTTGA+TGG 0.411429 5.1:-48092959 MS.gene010244:CDS
ACTCCAAGGGTATTTACTCT+TGG 0.414446 5.1:+48092803 None:intergenic
AACCCTACCAACTGTTTCAC+TGG 0.418928 5.1:+48091066 None:intergenic
AGGTGGTTATTTGTTGGTTG+TGG 0.420306 5.1:-48090935 MS.gene010244:CDS
ATAAGTTTCTGTTGCTTACC+AGG 0.420753 5.1:+48092512 None:intergenic
TGAAACTGGTGGAAGGGCTC+TGG 0.429489 5.1:-48092363 MS.gene010244:CDS
TAAGACTAGGTTTGTTTGAT+GGG 0.430129 5.1:-48092958 MS.gene010244:CDS
AACAGCTGGGGAAGATCCTT+TGG 0.430162 5.1:-48095253 MS.gene010244:CDS
CAGCTTCAAGAGCAAGGTCT+AGG 0.436293 5.1:+48092876 None:intergenic
AAGCCAAAGAAAGGTAGAAA+TGG 0.439382 5.1:-48091093 MS.gene010244:CDS
CAAAATTGGAGGCATCATTT+GGG 0.439628 5.1:-48092399 MS.gene010244:CDS
CTCATTCTCATGTCTGTCAT+TGG 0.443342 5.1:+48091420 None:intergenic
TTTGAGAGTGTGACGGTGGA+AGG 0.447503 5.1:-48091045 MS.gene010244:CDS
TTTCCCTCAAATCATTCTTA+CGG 0.448886 5.1:-48095947 MS.gene010244:CDS
TGAAGAAGGTGGTTATTTGT+TGG 0.451987 5.1:-48090941 MS.gene010244:CDS
GAGGTGGAAAGGGTGAAGTT+GGG 0.452463 5.1:-48091023 MS.gene010244:CDS
GTGTTTGGTGACTATAACCC+TGG 0.452505 5.1:-48092332 MS.gene010244:intron
TTGGAGATGTCACAGGAGTA+AGG 0.454848 5.1:+48096204 None:intergenic
ATGTCCATTTCTGTAACATT+GGG 0.459363 5.1:-48091168 MS.gene010244:CDS
AATTAGTTTCCCACCTTCAA+AGG 0.461085 5.1:+48095182 None:intergenic
AGTTACTGACCTTACTGATT+CGG 0.462510 5.1:+48095896 None:intergenic
GCACGGTCAATTTGAGATAT+GGG 0.467018 5.1:+48093007 None:intergenic
TTAGCAAAAGTAATATCAAC+AGG 0.467973 5.1:+48092431 None:intergenic
TGGCTCTTTGAGTGATGGTA+AGG 0.468209 5.1:+48096145 None:intergenic
ACGGTGGAAGGAGGTGGAAA+GGG 0.469710 5.1:-48091033 MS.gene010244:CDS
TTATTTGTTGGTTGTGGGAG+AGG 0.471909 5.1:-48090929 MS.gene010244:CDS
GGTAAGGTTGAGATTGCAAA+AGG 0.475896 5.1:+48096161 None:intergenic
TTGCACGGTGTTTCTTATGT+TGG 0.479426 5.1:-48096012 MS.gene010244:CDS
CTGCCATATTGAAGTTTGGT+TGG 0.480427 5.1:+48092932 None:intergenic
GAGCCGTGACACAATGTCTT+TGG 0.481669 5.1:+48096125 None:intergenic
AATATGGATACTTGTTTACA+AGG 0.482332 5.1:+48092722 None:intergenic
TCTTATGTGAGAGGTCTTCA+AGG 0.482991 5.1:-48095210 MS.gene010244:CDS
GTGTTTCCGTCTCTTGACTT+TGG 0.484702 5.1:+48092558 None:intergenic
CATATTTAGGGATCCAAGAT+GGG 0.485529 5.1:-48095289 MS.gene010244:CDS
AGTAATGGTGATGGAAAATT+GGG 0.485836 5.1:+48096293 None:intergenic
ACATATTTAGGGATCCAAGA+TGG 0.488212 5.1:-48095290 MS.gene010244:CDS
GGTGGTTATTTGTTGGTTGT+GGG 0.491601 5.1:-48090934 MS.gene010244:CDS
ATCCAGAACGATAATGTGTC+TGG 0.493072 5.1:+48092675 None:intergenic
AGGGTATTTACTCTTGGAAG+TGG 0.494590 5.1:+48092809 None:intergenic
GTTGTATGAATGAAGGTGAT+TGG 0.496646 5.1:-48095381 MS.gene010244:intron
GGTGTTTCTTATGTTGGTAA+GGG 0.501707 5.1:-48096006 MS.gene010244:CDS
CTGTTTGTGAAGCCAAAGAA+AGG 0.504938 5.1:-48091102 MS.gene010244:CDS
GTCTTTGGCTCTTTGAGTGA+TGG 0.506861 5.1:+48096140 None:intergenic
CAAGGAGATTCCTTTGAAGG+TGG 0.506994 5.1:-48095192 MS.gene010244:CDS
GACGGTGGAAGGAGGTGGAA+AGG 0.507657 5.1:-48091034 MS.gene010244:CDS
ATGAGAGCTGATCCATCATC+AGG 0.511303 5.1:-48091402 MS.gene010244:CDS
GTAGAAACGGTAGGTTCTAC+CGG 0.511605 5.1:+48091374 None:intergenic
CGGTATACCGAGTCGAGGAA+TGG 0.513844 5.1:+48096059 None:intergenic
ACATCAGCTACAACATCCTC+TGG 0.517153 5.1:+48094043 None:intergenic
CTACCGGGATAGCCTGATGA+TGG 0.517596 5.1:+48091390 None:intergenic
TGAGGGAAACTAGTTGCAGC+TGG 0.520399 5.1:+48095961 None:intergenic
TGGTTGACTGGTTGATGTGA+AGG 0.523221 5.1:+48091268 None:intergenic
GCGTACAAGAGTTGGTGAAT+CGG 0.523249 5.1:+48096227 None:intergenic
TTCTTGCAGCTTCAAGAGCA+AGG 0.526483 5.1:+48092870 None:intergenic
GGTTACTTTACAAGATTTGG+CGG 0.526554 5.1:-48094673 MS.gene010244:CDS
TATCGTTCTGGATGTACTGA+TGG 0.530389 5.1:-48092665 MS.gene010244:CDS
AAGAATAATGACAAAATTGG+AGG 0.530513 5.1:-48092410 MS.gene010244:CDS
GGAAGAGGACAAGAAACAGC+TGG 0.534154 5.1:-48095267 MS.gene010244:CDS
GCTAGAGGAGTGTACAATGC+TGG 0.534160 5.1:-48095351 MS.gene010244:CDS
ATACCGAGTCGAGGAATGGC+AGG 0.534851 5.1:+48096063 None:intergenic
ATTGGAGGCATCATTTGGGC+TGG 0.536363 5.1:-48092395 MS.gene010244:CDS
CAGCCGTAAGAATGATTTGA+GGG 0.537119 5.1:+48095944 None:intergenic
TCTTGGAAGTGGGAGAATTG+AGG 0.537861 5.1:+48092820 None:intergenic
AAGGTCTACGAATTCGGCTA+TGG 0.539382 5.1:-48091342 MS.gene010244:CDS
CCTTTGGACCTGTGTAGAAA+CGG 0.540578 5.1:+48091361 None:intergenic
ATCCAGTGAAACAGTTGGTA+GGG 0.542668 5.1:-48091068 MS.gene010244:CDS
GATCCATCATCAGGCTATCC+CGG 0.542828 5.1:-48091393 MS.gene010244:CDS
GGCTTCACAAACAGCAACAC+AGG 0.545539 5.1:+48091111 None:intergenic
CTATGATTTGGAAAATTGGA+AGG 0.547121 5.1:-48095115 MS.gene010244:CDS
GGTGTCAAGGTGGTTGAAGA+AGG 0.548262 5.1:-48090955 MS.gene010244:CDS
TACAATGCTGGACAAGCTCA+AGG 0.548478 5.1:-48095339 MS.gene010244:CDS
CTTCCAAGAGTAAATACCCT+TGG 0.550798 5.1:-48092806 MS.gene010244:CDS
AAGGAGATTCCTTTGAAGGT+GGG 0.551664 5.1:-48095191 MS.gene010244:CDS
CAATGTTACAGAAATGGACA+TGG 0.553553 5.1:+48091170 None:intergenic
AGGGATCCAAGATGGGGAAG+AGG 0.555974 5.1:-48095282 MS.gene010244:CDS
AGAGTTCATTTAGAGTTACC+TGG 0.556126 5.1:-48092530 MS.gene010244:CDS
GCCCTTCCACCAGTTTCACC+AGG 0.557917 5.1:+48092368 None:intergenic
TAAGGTTGAGATTGCAAAAG+GGG 0.559131 5.1:+48096163 None:intergenic
GGTAAGGGGATAATATTGAA+TGG 0.560036 5.1:-48095991 MS.gene010244:CDS
AATCCAGTGAAACAGTTGGT+AGG 0.561271 5.1:-48091069 MS.gene010244:CDS
GTGTTTCTTATGTTGGTAAG+GGG 0.562805 5.1:-48096005 MS.gene010244:CDS
TCGGTATACCGAGTTATCAA+TGG 0.563582 5.1:-48096047 MS.gene010244:CDS
AATGGTAAACAGATTGTGTA+GGG 0.564507 5.1:+48092985 None:intergenic
TCATTCCACCATTGATAACT+CGG 0.565942 5.1:+48096039 None:intergenic
CCATACTTTGAATTTACCAA+AGG 0.567024 5.1:+48095237 None:intergenic
TAATGGTAAACAGATTGTGT+AGG 0.569087 5.1:+48092984 None:intergenic
ATCCTGGTGAAACTGGTGGA+AGG 0.570539 5.1:-48092370 MS.gene010244:CDS
GAAGGTGGGAAACTAATTGG+AGG 0.571323 5.1:-48095177 MS.gene010244:CDS
GCTCTTGAAGCTGCAAGAAG+TGG 0.571675 5.1:-48092866 MS.gene010244:CDS
CAAATACTGGAAGCATGGCT+GGG 0.573487 5.1:-48091140 MS.gene010244:CDS
ACTTTGGTACCGAATCAGTA+AGG 0.574437 5.1:-48095905 MS.gene010244:intron
GAGAGTGTGACGGTGGAAGG+AGG 0.575492 5.1:-48091042 MS.gene010244:CDS
AGTGTGACGGTGGAAGGAGG+TGG 0.578214 5.1:-48091039 MS.gene010244:CDS
GTAAGGTTGAGATTGCAAAA+GGG 0.580172 5.1:+48096162 None:intergenic
AGCAAATGAGAGTGGTGTCA+AGG 0.581128 5.1:-48090968 MS.gene010244:CDS
CATTGTGTCACGGCTCACAT+TGG 0.582035 5.1:-48096118 MS.gene010244:CDS
GTATCGAATGAGTGGTTGAC+TGG 0.582453 5.1:+48091256 None:intergenic
AATTACAAATACTGGAAGCA+TGG 0.582605 5.1:-48091145 MS.gene010244:CDS
GCAGCCGTAAGAATGATTTG+AGG 0.582798 5.1:+48095943 None:intergenic
GTAGCTGATGTACTTCGAGC+TGG 0.583158 5.1:-48094031 MS.gene010244:intron
TCCTGGTGAAACTGGTGGAA+GGG 0.585464 5.1:-48092369 MS.gene010244:CDS
ACTCTGAAACAAGTTTGTAA+CGG 0.590668 5.1:+48091214 None:intergenic
TATGGTGTTTCTTATGTGAG+AGG 0.591390 5.1:-48095219 MS.gene010244:CDS
TGGAGATGTCACAGGAGTAA+GGG 0.592013 5.1:+48096205 None:intergenic
CATTAGGGCCTATAACTCCA+AGG 0.594911 5.1:+48092789 None:intergenic
GAAGAGGACAAGAAACAGCT+GGG 0.598422 5.1:-48095266 MS.gene010244:CDS
GAGTAAGGGCGTACAAGAGT+TGG 0.599794 5.1:+48096219 None:intergenic
GGGTATTTACTCTTGGAAGT+GGG 0.605290 5.1:+48092810 None:intergenic
CCGTTTCTACACAGGTCCAA+AGG 0.609130 5.1:-48091361 MS.gene010244:CDS
AGAACCTACCGTTTCTACAC+AGG 0.612051 5.1:-48091369 MS.gene010244:CDS
GGTTATCCTGGTGAAACTGG+TGG 0.612813 5.1:-48092374 MS.gene010244:CDS
ACGTGGGTTGGAGATGTCAC+AGG 0.612949 5.1:+48096197 None:intergenic
GTCAAGGTGGTTGAAGAAGG+TGG 0.614362 5.1:-48090952 MS.gene010244:CDS
TGGAAATCCAGTGAAACAGT+TGG 0.620701 5.1:-48091073 MS.gene010244:CDS
GTATACCGAGTTATCAATGG+TGG 0.620903 5.1:-48096044 MS.gene010244:CDS
GTGAATCGGCATGAACGAGT+TGG 0.622493 5.1:+48096241 None:intergenic
TTCTATGCAACTATGAAACG+AGG 0.622993 5.1:+48094638 None:intergenic
TTAAATCAGGTATATTGCGT+CGG 0.624270 5.1:-48094116 MS.gene010244:intron
GCTCCTGCCATTCCTCGACT+CGG 0.625159 5.1:-48096066 MS.gene010244:CDS
TGGACCTGTGTAGAAACGGT+AGG 0.625209 5.1:+48091365 None:intergenic
TTTACCATTAGAATAAGACT+AGG 0.630221 5.1:-48092971 MS.gene010244:CDS
CGATACATATATGAGAAACA+AGG 0.634724 5.1:-48094079 MS.gene010244:CDS
GGTAGGGTTTGAGAGTGTGA+CGG 0.635292 5.1:-48091052 MS.gene010244:CDS
AGGGTTTGAGAGTGTGACGG+TGG 0.638866 5.1:-48091049 MS.gene010244:CDS
ATTGGACCAAAGTCAAGAGA+CGG 0.639353 5.1:-48092564 MS.gene010244:CDS
ATAGAACAAGGACGATCTAG+TGG 0.641432 5.1:-48094621 MS.gene010244:CDS
TTTCATAGTTGCATAGAACA+AGG 0.642706 5.1:-48094633 MS.gene010244:CDS
TAGAAACGGTAGGTTCTACC+GGG 0.648311 5.1:+48091375 None:intergenic
CTTAGTAGAGCAAATGAGAG+TGG 0.648348 5.1:-48090976 MS.gene010244:CDS
TCAGGGATGGATCTAGAGTG+TGG 0.648701 5.1:-48093079 MS.gene010244:intron
GTGATTGGAACTGAGGCTAG+AGG 0.649624 5.1:-48095366 MS.gene010244:CDS
TAAACAGATTGTGTAGGGCA+CGG 0.653543 5.1:+48092990 None:intergenic
ATTAGGGCCTATAACTCCAA+GGG 0.662705 5.1:+48092790 None:intergenic
GAGCCAAAGACATTGTGTCA+CGG 0.665561 5.1:-48096128 MS.gene010244:CDS
AATGAAGGTGATTGGAACTG+AGG 0.666042 5.1:-48095373 MS.gene010244:intron
AGTTTGGAACTCCATTAACA+CGG 0.668614 5.1:+48094580 None:intergenic
TATGATTTGGAAAATTGGAA+GGG 0.673969 5.1:-48095114 MS.gene010244:CDS
ACAATGCTGGACAAGCTCAA+GGG 0.675868 5.1:-48095338 MS.gene010244:CDS
ATATTTAGGGATCCAAGATG+GGG 0.682736 5.1:-48095288 MS.gene010244:CDS
TCTATGCAACTATGAAACGA+GGG 0.684013 5.1:+48094639 None:intergenic
GAGGGAGACTACCAATGACA+TGG 0.689428 5.1:-48091467 MS.gene010244:CDS
AAGAGGACAAGAAACAGCTG+GGG 0.694770 5.1:-48095265 MS.gene010244:CDS
TGGTGGAATGAAGCTTTGCA+CGG 0.702092 5.1:-48096027 MS.gene010244:CDS
ATGGATACTTGTTTACAAGG+AGG 0.708927 5.1:+48092725 None:intergenic
TAACTCGGTATACCGAGTCG+AGG 0.711678 5.1:+48096054 None:intergenic
AAATGAGAGTGGTGTCAAGG+TGG 0.736902 5.1:-48090965 MS.gene010244:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACATAATTCAATGTAATTAT+AGG + chr5.1:48091410-48091429 None:intergenic 15.0%
!! ATAGAATTATTATGTGTTTA+CGG - chr5.1:48093236-48093255 MS.gene010244:intron 15.0%
!! ATATACTAGAAAAAGTTATT+TGG + chr5.1:48095648-48095667 None:intergenic 15.0%
!! TATACTAGAAAAAGTTATTT+GGG + chr5.1:48095647-48095666 None:intergenic 15.0%
!!! AATAAGTGATTATGTTATTT+TGG - chr5.1:48094603-48094622 MS.gene010244:CDS 15.0%
!! AAACAAGTATCCATATTAAA+AGG - chr5.1:48094481-48094500 MS.gene010244:intron 20.0%
!! ACAAATAAACATACATAATG+TGG - chr5.1:48094914-48094933 MS.gene010244:intron 20.0%
!! ACCAAACATAAACATATTTA+GGG - chr5.1:48091896-48091915 MS.gene010244:intron 20.0%
!! ATACTAGAAAAAGTTATTTG+GGG + chr5.1:48095646-48095665 None:intergenic 20.0%
!! ATGGATTTGGATTATTAAAA+TGG + chr5.1:48092492-48092511 None:intergenic 20.0%
!! ATTACAATACAAACAAAACT+CGG + chr5.1:48091771-48091790 None:intergenic 20.0%
!! CTTCAAAAAAATCCAAATAT+GGG + chr5.1:48091528-48091547 None:intergenic 20.0%
!! GTTCTTATAAATTACAAAAG+TGG - chr5.1:48092747-48092766 MS.gene010244:CDS 20.0%
!! TACATAATGTGGTAAAAAAA+TGG - chr5.1:48094925-48094944 MS.gene010244:intron 20.0%
!! TATGTATGTTTATTTGTTCA+TGG + chr5.1:48094911-48094930 None:intergenic 20.0%
!! TCTTCAAAAAAATCCAAATA+TGG + chr5.1:48091529-48091548 None:intergenic 20.0%
!! TGAAGTTTATACATGTTTAA+AGG + chr5.1:48095150-48095169 None:intergenic 20.0%
!! TTCAAATAAATTCTACTACT+GGG - chr5.1:48091692-48091711 MS.gene010244:intron 20.0%
!! TTGCAAAATAAAGATAACTA+AGG + chr5.1:48093898-48093917 None:intergenic 20.0%
!! TTTCAAATAAATTCTACTAC+TGG - chr5.1:48091691-48091710 MS.gene010244:intron 20.0%
!!! AAGAACTATTGATGATTTAT+TGG + chr5.1:48094434-48094453 None:intergenic 20.0%
!!! AGTAAGATAACGATATTTTA+AGG + chr5.1:48093346-48093365 None:intergenic 20.0%
!!! ATAATCAATGTTTTCAATTG+TGG + chr5.1:48095577-48095596 None:intergenic 20.0%
!!! GATTATGTTATTTTGGTTAT+GGG - chr5.1:48094610-48094629 MS.gene010244:CDS 20.0%
!!! GTATTTTGATGAAATCTTTT+GGG + chr5.1:48095758-48095777 None:intergenic 20.0%
!!! TGATTATGTTATTTTGGTTA+TGG - chr5.1:48094609-48094628 MS.gene010244:CDS 20.0%
!!! TGTCTTAATTTTACTCAATT+TGG - chr5.1:48093835-48093854 MS.gene010244:intron 20.0%
!!! TTACAATCTTTTAACCAATA+CGG - chr5.1:48092647-48092666 MS.gene010244:CDS 20.0%
!!! TTGATTAGTATGAATGATTT+TGG - chr5.1:48093055-48093074 MS.gene010244:CDS 20.0%
!!! TTTCTCATTAGTATTTTTGT+CGG - chr5.1:48093393-48093412 MS.gene010244:intron 20.0%
! AAAAATGAAAGTAATGGTGA+TGG + chr5.1:48090916-48090935 None:intergenic 25.0%
! AAACAGAATACAAAAGAAGA+AGG + chr5.1:48093754-48093773 None:intergenic 25.0%
! AAATATGTAGCTTCAAAAAG+AGG + chr5.1:48092985-48093004 None:intergenic 25.0%
! AAGAATAATGACAAAATTGG+AGG - chr5.1:48094787-48094806 MS.gene010244:intron 25.0%
! AATATGGATACTTGTTTACA+AGG + chr5.1:48094478-48094497 None:intergenic 25.0%
! AGAGAAAAGAAAACTTACTT+TGG + chr5.1:48092132-48092151 None:intergenic 25.0%
! AGATTCCAAGAAAATAGTTA+AGG - chr5.1:48095394-48095413 MS.gene010244:intron 25.0%
! AGCATAACAGTATATAGAAA+AGG + chr5.1:48092428-48092447 None:intergenic 25.0%
! AGGAAAAAATGGAATTTCAA+TGG - chr5.1:48092672-48092691 MS.gene010244:CDS 25.0%
! AGTAACCTGAATTATTAGAA+TGG + chr5.1:48092511-48092530 None:intergenic 25.0%
! ATATCAAATTGCTACATACA+TGG + chr5.1:48095517-48095536 None:intergenic 25.0%
! ATTATGTGTTGTATGAATGA+AGG - chr5.1:48091809-48091828 MS.gene010244:intron 25.0%
! ATTTAGTTGTGCTTACTAAA+TGG + chr5.1:48095295-48095314 None:intergenic 25.0%
! CAAAGATGTAACATAATTAG+AGG - chr5.1:48093631-48093650 MS.gene010244:intron 25.0%
! CAAATCATTTAACCCATATT+TGG - chr5.1:48091513-48091532 MS.gene010244:intron 25.0%
! CAAATCCATTCTAATAATTC+AGG - chr5.1:48092503-48092522 MS.gene010244:CDS 25.0%
! CACAAAATTACCAAAATAAC+AGG + chr5.1:48094739-48094758 None:intergenic 25.0%
! CACCAAACATAAACATATTT+AGG - chr5.1:48091895-48091914 MS.gene010244:intron 25.0%
! GAAGAGAAAAATGAAAGTAA+TGG + chr5.1:48090922-48090941 None:intergenic 25.0%
! GCTAAGAATAATGACAAAAT+TGG - chr5.1:48094784-48094803 MS.gene010244:intron 25.0%
! GGAAAAAATGGAATTTCAAT+GGG - chr5.1:48092673-48092692 MS.gene010244:CDS 25.0%
! GGGATATATACAATGTATTT+CGG + chr5.1:48095625-48095644 None:intergenic 25.0%
! TACTAGAAAAAGTTATTTGG+GGG + chr5.1:48095645-48095664 None:intergenic 25.0%
! TAGAAAATAGTGTTTGTTTG+CGG + chr5.1:48095492-48095511 None:intergenic 25.0%
! TATACATGTTTAAAGGATCT+TGG + chr5.1:48095143-48095162 None:intergenic 25.0%
! TCCCTAAATATGTTTATGTT+TGG + chr5.1:48091900-48091919 None:intergenic 25.0%
! TCGTTATCTTACTTTATCAA+TGG - chr5.1:48093353-48093372 MS.gene010244:intron 25.0%
! TCTGATTATGACATAAACAA+AGG + chr5.1:48093207-48093226 None:intergenic 25.0%
! TGGAAAACATTGTTTCATAA+AGG + chr5.1:48092889-48092908 None:intergenic 25.0%
! TTACAATACAAACAAAACTC+GGG + chr5.1:48091770-48091789 None:intergenic 25.0%
! TTAGCAAAAGTAATATCAAC+AGG + chr5.1:48094769-48094788 None:intergenic 25.0%
! TTATATTAAGTCACATGGTT+TGG - chr5.1:48093430-48093449 MS.gene010244:intron 25.0%
! TTTACCATTAGAATAAGACT+AGG - chr5.1:48094226-48094245 MS.gene010244:intron 25.0%
! TTTAGTTGTGCTTACTAAAT+GGG + chr5.1:48095294-48095313 None:intergenic 25.0%
! TTTGCTTATATTAAGTCACA+TGG - chr5.1:48093425-48093444 MS.gene010244:intron 25.0%
!! AACAACATTTTGTCAAACAT+GGG + chr5.1:48091334-48091353 None:intergenic 25.0%
!! AATGTTTTCCACTCTATTAA+AGG - chr5.1:48092898-48092917 MS.gene010244:CDS 25.0%
!! ACTGTAAAAGCCTTTTAATA+TGG + chr5.1:48094494-48094513 None:intergenic 25.0%
!! AGTAAGTTTTCTTTTCTCTA+TGG - chr5.1:48092133-48092152 MS.gene010244:intron 25.0%
!! AGTTGAGAAATAGTAGTTTT+AGG + chr5.1:48095674-48095693 None:intergenic 25.0%
!! ATATTTTATCATTGCAATGC+AGG - chr5.1:48095708-48095727 MS.gene010244:intron 25.0%
!! ATGTGGTAAAAAAATGGATT+TGG - chr5.1:48094931-48094950 MS.gene010244:intron 25.0%
!! ATTGATGATTTATTGGCATT+AGG + chr5.1:48094427-48094446 None:intergenic 25.0%
!! CTGAATTATTAGAATGGATT+TGG + chr5.1:48092505-48092524 None:intergenic 25.0%
!! CTTGTGTATGTTTGAAATTA+TGG + chr5.1:48094042-48094061 None:intergenic 25.0%
!! GTTCTTTTAGCAAACTATTT+TGG - chr5.1:48094448-48094467 MS.gene010244:intron 25.0%
!! TATGATTTGGAAAATTGGAA+GGG - chr5.1:48092083-48092102 MS.gene010244:intron 25.0%
!! TTAACTATTTTCTTGGAATC+TGG + chr5.1:48095395-48095414 None:intergenic 25.0%
!! TTGATGATTTATTGGCATTA+GGG + chr5.1:48094426-48094445 None:intergenic 25.0%
!!! ATTATAATTTTGATGAACCG+TGG - chr5.1:48094066-48094085 MS.gene010244:CDS 25.0%
!!! GGTATTTTGATGAAATCTTT+TGG + chr5.1:48095759-48095778 None:intergenic 25.0%
!!! GTTATTTTGGTAATTTTGTG+TGG - chr5.1:48094739-48094758 MS.gene010244:intron 25.0%
AAAACTAAAAGACAAAGTCG+AGG + chr5.1:48092280-48092299 None:intergenic 30.0%
AAACTTCAATATGGCAGAAT+TGG - chr5.1:48094271-48094290 MS.gene010244:intron 30.0%
AAATAAATTCTACTACTGGG+CGG - chr5.1:48091695-48091714 MS.gene010244:intron 30.0%
AACATGATTCTCCTAAACAT+AGG + chr5.1:48093938-48093957 None:intergenic 30.0%
AAGATAACTAAGGCAAAGAA+AGG + chr5.1:48093888-48093907 None:intergenic 30.0%
AAGTCATGATTCAATTTCCA+AGG + chr5.1:48092358-48092377 None:intergenic 30.0%
AATCCAACCAAACTTCAATA+TGG - chr5.1:48094262-48094281 MS.gene010244:intron 30.0%
AATGGTAAACAGATTGTGTA+GGG + chr5.1:48094215-48094234 None:intergenic 30.0%
AATTACAAATACTGGAAGCA+TGG - chr5.1:48096052-48096071 MS.gene010244:CDS 30.0%
AATTCCCAATGTTACAGAAA+TGG + chr5.1:48096036-48096055 None:intergenic 30.0%
AATTCTGCCATATTGAAGTT+TGG + chr5.1:48094272-48094291 None:intergenic 30.0%
ACATTGGGAATTACAAATAC+TGG - chr5.1:48096044-48096063 MS.gene010244:CDS 30.0%
ACGCAATATACCTGATTTAA+CGG + chr5.1:48093081-48093100 None:intergenic 30.0%
AGATAACTAAGGCAAAGAAA+GGG + chr5.1:48093887-48093906 None:intergenic 30.0%
AGGAATAATTTGAGAAGCTT+AGG + chr5.1:48095881-48095900 None:intergenic 30.0%
AGTATTCTTAAAATCGTGGT+TGG - chr5.1:48092204-48092223 MS.gene010244:intron 30.0%
ATGTCCATTTCTGTAACATT+GGG - chr5.1:48096029-48096048 MS.gene010244:CDS 30.0%
ATGTTGTACTACCGTTATTT+CGG - chr5.1:48093953-48093972 MS.gene010244:intron 30.0%
ATTTGGTTGAATTGACTAGA+TGG - chr5.1:48095358-48095377 MS.gene010244:CDS 30.0%
CACAACTAAATCTCAATTAC+TGG - chr5.1:48095304-48095323 MS.gene010244:CDS 30.0%
CATGTTTGACAAAATGTTGT+TGG - chr5.1:48091333-48091352 MS.gene010244:CDS 30.0%
CCATACTTTGAATTTACCAA+AGG + chr5.1:48091963-48091982 None:intergenic 30.0%
CCTTTGGTAAATTCAAAGTA+TGG - chr5.1:48091960-48091979 MS.gene010244:intron 30.0%
CGATACATATATGAGAAACA+AGG - chr5.1:48093118-48093137 MS.gene010244:intron 30.0%
GTCTAGTATTCTTAAAATCG+TGG - chr5.1:48092200-48092219 MS.gene010244:intron 30.0%
GTTGAAACACTTCTTGAATT+AGG - chr5.1:48091355-48091374 MS.gene010244:CDS 30.0%
TAAATCTCAATTACTGGATG+CGG - chr5.1:48095310-48095329 MS.gene010244:CDS 30.0%
TAATGGTAAACAGATTGTGT+AGG + chr5.1:48094216-48094235 None:intergenic 30.0%
TATATCATGTGCCGAAATAA+CGG + chr5.1:48093967-48093986 None:intergenic 30.0%
TTAAATCAGGTATATTGCGT+CGG - chr5.1:48093081-48093100 MS.gene010244:intron 30.0%
TTATCAATGGTCTCAATGTA+AGG - chr5.1:48093366-48093385 MS.gene010244:intron 30.0%
TTCAATGTAATTATAGGCGT+CGG + chr5.1:48091404-48091423 None:intergenic 30.0%
TTCTCAAATTATTAGCGTGT+CGG - chr5.1:48091434-48091453 MS.gene010244:CDS 30.0%
TTTCATAGTTGCATAGAACA+AGG - chr5.1:48092564-48092583 MS.gene010244:CDS 30.0%
TTTCCATTTCTACCTTTCTT+TGG + chr5.1:48096110-48096129 None:intergenic 30.0%
TTTCCCTCAAATCATTCTTA+CGG - chr5.1:48091250-48091269 MS.gene010244:CDS 30.0%
! ATAAGACTAGGTTTGTTTGA+TGG - chr5.1:48094238-48094257 MS.gene010244:intron 30.0%
! CAACAACATTTTGTCAAACA+TGG + chr5.1:48091335-48091354 None:intergenic 30.0%
! CTACAATTCTAGTATTGAGT+GGG - chr5.1:48091651-48091670 MS.gene010244:intron 30.0%
! CTATGATTTGGAAAATTGGA+AGG - chr5.1:48092082-48092101 MS.gene010244:intron 30.0%
! CTTCCAATTTTCCAAATCAT+AGG + chr5.1:48092084-48092103 None:intergenic 30.0%
! TAAGACTAGGTTTGTTTGAT+GGG - chr5.1:48094239-48094258 MS.gene010244:intron 30.0%
! TACAAACTTGTTTCAGAGTT+AGG - chr5.1:48095987-48096006 MS.gene010244:CDS 30.0%
! TCAGGTTACTTTACAAGATT+TGG - chr5.1:48092521-48092540 MS.gene010244:CDS 30.0%
! TGCGTGATCAAAAATTTTCA+GGG - chr5.1:48094101-48094120 MS.gene010244:CDS 30.0%
! TTCAGCATAGTTTGTAGTAT+AGG - chr5.1:48093601-48093620 MS.gene010244:intron 30.0%
! TTGCGTGATCAAAAATTTTC+AGG - chr5.1:48094100-48094119 MS.gene010244:CDS 30.0%
! TTTTAGTACTTACCCAATCT+CGG - chr5.1:48091587-48091606 MS.gene010244:intron 30.0%
!! AAGTAATGGTGATGGAAAAT+TGG + chr5.1:48090908-48090927 None:intergenic 30.0%
!! ACTCTGAAACAAGTTTGTAA+CGG + chr5.1:48095986-48096005 None:intergenic 30.0%
!! AGTAATGGTGATGGAAAATT+GGG + chr5.1:48090907-48090926 None:intergenic 30.0%
!! ATTTTGGTAATTTTGTGTGG+TGG - chr5.1:48094742-48094761 MS.gene010244:intron 30.0%
!! CAAACCTAGTCTTATTCTAA+TGG + chr5.1:48094233-48094252 None:intergenic 30.0%
!! TCTTTAGAGCATACTTGATT+TGG + chr5.1:48094298-48094317 None:intergenic 30.0%
!! TGATCAAAAATTTTCAGGGA+TGG - chr5.1:48094105-48094124 MS.gene010244:CDS 30.0%
!! TTCTAAGAAGCCTGTTATTT+TGG - chr5.1:48094726-48094745 MS.gene010244:intron 30.0%
!!! TATCACCAACTTTTTTCCAA+TGG + chr5.1:48093549-48093568 None:intergenic 30.0%
!!! TGTTATTTTGGTTATGGGAT+TGG - chr5.1:48094615-48094634 MS.gene010244:CDS 30.0%
AACTGTTTCACCAACTAAGT+AGG + chr5.1:48092935-48092954 None:intergenic 35.0%
AAGACAGAAGAAAACTAACC+AGG + chr5.1:48094886-48094905 None:intergenic 35.0%
AAGCCAAAGAAAGGTAGAAA+TGG - chr5.1:48096104-48096123 MS.gene010244:CDS 35.0%
AATGAAACGAAGCACAGATA+CGG + chr5.1:48091493-48091512 None:intergenic 35.0%
ACACTTTACTGCCTATGATT+TGG - chr5.1:48092070-48092089 MS.gene010244:intron 35.0%
ACATATTTAGGGATCCAAGA+TGG - chr5.1:48091907-48091926 MS.gene010244:intron 35.0%
ACCATAGAATTAATCACCCT+AGG + chr5.1:48092165-48092184 None:intergenic 35.0%
ACCATTCAATCAAGATTGAG+CGG + chr5.1:48095072-48095091 None:intergenic 35.0%
AGACAGAAGAAAACTAACCA+GGG + chr5.1:48094885-48094904 None:intergenic 35.0%
AGATTGTAATCTGCACAGTT+TGG + chr5.1:48092636-48092655 None:intergenic 35.0%
AGTCTCCATTGGAAAAAAGT+TGG - chr5.1:48093541-48093560 MS.gene010244:intron 35.0%
ATATTTAGGGATCCAAGATG+GGG - chr5.1:48091909-48091928 MS.gene010244:intron 35.0%
ATGGATACTTGTTTACAAGG+AGG + chr5.1:48094475-48094494 None:intergenic 35.0%
CAATGTTACAGAAATGGACA+TGG + chr5.1:48096030-48096049 None:intergenic 35.0%
CATATTTAGGGATCCAAGAT+GGG - chr5.1:48091908-48091927 MS.gene010244:intron 35.0%
CATGTCCATTTCTGTAACAT+TGG - chr5.1:48096028-48096047 MS.gene010244:CDS 35.0%
CCACTCAATACTAGAATTGT+AGG + chr5.1:48091653-48091672 None:intergenic 35.0%
CTAAACATAGGCTAATTCTG+AGG + chr5.1:48093926-48093945 None:intergenic 35.0%
GGTAAGGGGATAATATTGAA+TGG - chr5.1:48091206-48091225 MS.gene010244:CDS 35.0%
GTAAATACCCTTGGAGTTAT+AGG - chr5.1:48094400-48094419 MS.gene010244:intron 35.0%
GTAAGGTTGAGATTGCAAAA+GGG + chr5.1:48091038-48091057 None:intergenic 35.0%
GTTGTATGAATGAAGGTGAT+TGG - chr5.1:48091816-48091835 MS.gene010244:intron 35.0%
TAAGGTTGAGATTGCAAAAG+GGG + chr5.1:48091037-48091056 None:intergenic 35.0%
TATGGTGTTTCTTATGTGAG+AGG - chr5.1:48091978-48091997 MS.gene010244:intron 35.0%
TCCTAGGGTGATTAATTCTA+TGG - chr5.1:48092161-48092180 MS.gene010244:intron 35.0%
TCTATGCAACTATGAAACGA+GGG + chr5.1:48092561-48092580 None:intergenic 35.0%
TCTCAAATTATTAGCGTGTC+GGG - chr5.1:48091435-48091454 MS.gene010244:CDS 35.0%
TGAAGAAGGTGGTTATTTGT+TGG - chr5.1:48096256-48096275 MS.gene010244:CDS 35.0%
TTATGTCGTTGTTGAATCCT+TGG - chr5.1:48092338-48092357 MS.gene010244:CDS 35.0%
TTCAACCAAATCTCTATCGT+TGG + chr5.1:48095349-48095368 None:intergenic 35.0%
TTCTATGCAACTATGAAACG+AGG + chr5.1:48092562-48092581 None:intergenic 35.0%
TTCTCTATGGTTTAGTCCTA+GGG - chr5.1:48092146-48092165 MS.gene010244:intron 35.0%
TTGAACCAACGATAGAGATT+TGG - chr5.1:48095341-48095360 MS.gene010244:CDS 35.0%
TTTAGTACTTACCCAATCTC+GGG - chr5.1:48091588-48091607 MS.gene010244:intron 35.0%
TTTATCATTGCAATGCAGGA+GGG - chr5.1:48095712-48095731 MS.gene010244:intron 35.0%
TTTCCAATGGAGACTATGAT+GGG + chr5.1:48093536-48093555 None:intergenic 35.0%
TTTCTCTATGGTTTAGTCCT+AGG - chr5.1:48092145-48092164 MS.gene010244:intron 35.0%
TTTGAAGGTGGGAAACTAAT+TGG - chr5.1:48092017-48092036 MS.gene010244:intron 35.0%
TTTGACGGAAATGAAGTTGT+AGG + chr5.1:48095901-48095920 None:intergenic 35.0%
! AATGGCTTGCCTCATATATA+TGG + chr5.1:48093482-48093501 None:intergenic 35.0%
! AATTAGTTTCCCACCTTCAA+AGG + chr5.1:48092018-48092037 None:intergenic 35.0%
! AGAGTTCATTTAGAGTTACC+TGG - chr5.1:48094667-48094686 MS.gene010244:CDS 35.0%
! AGTTACTGACCTTACTGATT+CGG + chr5.1:48091304-48091323 None:intergenic 35.0%
! AGTTTGGAACTCCATTAACA+CGG + chr5.1:48092620-48092639 None:intergenic 35.0%
! ATAAGTTTCTGTTGCTTACC+AGG + chr5.1:48094688-48094707 None:intergenic 35.0%
! ATCTTTTAACCAATACGGCA+AGG - chr5.1:48092652-48092671 MS.gene010244:CDS 35.0%
! ATGGCTTGCCTCATATATAT+GGG + chr5.1:48093481-48093500 None:intergenic 35.0%
! CCTACAATTCTAGTATTGAG+TGG - chr5.1:48091650-48091669 MS.gene010244:intron 35.0%
! CTCAGAATTAGCCTATGTTT+AGG - chr5.1:48093924-48093943 MS.gene010244:intron 35.0%
! CTGCCTATGATTTGGAAAAT+TGG - chr5.1:48092078-48092097 MS.gene010244:intron 35.0%
! CTTCTTTTGATCCCAAACTT+TGG - chr5.1:48091276-48091295 MS.gene010244:CDS 35.0%
! GGTGTTTCTTATGTTGGTAA+GGG - chr5.1:48091191-48091210 MS.gene010244:CDS 35.0%
! GGTTACTTTACAAGATTTGG+CGG - chr5.1:48092524-48092543 MS.gene010244:CDS 35.0%
! GTGTTTCTTATGTTGGTAAG+GGG - chr5.1:48091192-48091211 MS.gene010244:CDS 35.0%
! TCACTTAGTTGTTTCAGTTC+TGG - chr5.1:48093708-48093727 MS.gene010244:intron 35.0%
! TCATTCCACCATTGATAACT+CGG + chr5.1:48091161-48091180 None:intergenic 35.0%
! TGCGACCTTAACTATTTTCT+TGG + chr5.1:48095402-48095421 None:intergenic 35.0%
! TTTTAGCAACTTCAACTGCT+CGG + chr5.1:48094585-48094604 None:intergenic 35.0%
! TTTTATCATTGCAATGCAGG+AGG - chr5.1:48095711-48095730 MS.gene010244:intron 35.0%
! TTTTCCAATGGAGACTATGA+TGG + chr5.1:48093537-48093556 None:intergenic 35.0%
!! AAATCTCTATCGTTGGTTCA+AGG + chr5.1:48095342-48095361 None:intergenic 35.0%
!! ACAAAATTGGAGGCATCATT+TGG - chr5.1:48094797-48094816 MS.gene010244:intron 35.0%
!! ATGATTTTGGCCGTTAAATC+AGG - chr5.1:48093068-48093087 MS.gene010244:CDS 35.0%
!! CAAAATTGGAGGCATCATTT+GGG - chr5.1:48094798-48094817 MS.gene010244:intron 35.0%
!! GATTAGTCTCCTGAAGTATT+CGG - chr5.1:48091721-48091740 MS.gene010244:intron 35.0%
!!! GTGAAGGTTGTTGTTTTTGA+CGG + chr5.1:48095916-48095935 None:intergenic 35.0%
AATCCAGTGAAACAGTTGGT+AGG - chr5.1:48096128-48096147 MS.gene010244:CDS 40.0%
AATGAAGGTGATTGGAACTG+AGG - chr5.1:48091824-48091843 MS.gene010244:intron 40.0%
ACCGCTCAATCTTGATTGAA+TGG - chr5.1:48095068-48095087 MS.gene010244:intron 40.0%
ACGCAACATGTAAATTGCCA+CGG + chr5.1:48094086-48094105 None:intergenic 40.0%
AGACTTTGTAGCTGCAATTG+TGG + chr5.1:48095426-48095445 None:intergenic 40.0%
AGGTTATGCAAAAACACCAG+AGG - chr5.1:48093138-48093157 MS.gene010244:intron 40.0%
ATAGAACAAGGACGATCTAG+TGG - chr5.1:48092576-48092595 MS.gene010244:CDS 40.0%
ATCCAGAACGATAATGTGTC+TGG + chr5.1:48094525-48094544 None:intergenic 40.0%
ATTAGGGCCTATAACTCCAA+GGG + chr5.1:48094410-48094429 None:intergenic 40.0%
ATTGGACCAAAGTCAAGAGA+CGG - chr5.1:48094633-48094652 MS.gene010244:CDS 40.0%
CAGCCGTAAGAATGATTTGA+GGG + chr5.1:48091256-48091275 None:intergenic 40.0%
CCAATACGGCAAGGAAAAAA+TGG - chr5.1:48092661-48092680 MS.gene010244:CDS 40.0%
CCATTCTAAGCCATCAATGA+TGG - chr5.1:48093497-48093516 MS.gene010244:intron 40.0%
CGGTGTTTCTTATGTTGGTA+AGG - chr5.1:48091190-48091209 MS.gene010244:CDS 40.0%
CTAACACAACCCTACAAAAC+TGG - chr5.1:48092230-48092249 MS.gene010244:intron 40.0%
CTCAAATTATTAGCGTGTCG+GGG - chr5.1:48091436-48091455 MS.gene010244:CDS 40.0%
CTCATTCTCATGTCTGTCAT+TGG + chr5.1:48095780-48095799 None:intergenic 40.0%
CTGCCATATTGAAGTTTGGT+TGG + chr5.1:48094268-48094287 None:intergenic 40.0%
CTGTTTGTGAAGCCAAAGAA+AGG - chr5.1:48096095-48096114 MS.gene010244:CDS 40.0%
CTTAGTAGAGCAAATGAGAG+TGG - chr5.1:48096221-48096240 MS.gene010244:CDS 40.0%
CTTCAAGGAGATTCCTTTGA+AGG - chr5.1:48092002-48092021 MS.gene010244:intron 40.0%
CTTCCAAGAGTAAATACCCT+TGG - chr5.1:48094391-48094410 MS.gene010244:intron 40.0%
GGGTATTTACTCTTGGAAGT+GGG + chr5.1:48094390-48094409 None:intergenic 40.0%
GGTAAGGTTGAGATTGCAAA+AGG + chr5.1:48091039-48091058 None:intergenic 40.0%
GGTCTCAAACCATATACCAT+CGG + chr5.1:48091619-48091638 None:intergenic 40.0%
GTATACCGAGTTATCAATGG+TGG - chr5.1:48091153-48091172 MS.gene010244:CDS 40.0%
GTGGGGTCTAATGAAAATGT+AGG + chr5.1:48093456-48093475 None:intergenic 40.0%
TAAACAGATTGTGTAGGGCA+CGG + chr5.1:48094210-48094229 None:intergenic 40.0%
TAAGCCATCAATGATGGTCA+TGG - chr5.1:48093503-48093522 MS.gene010244:intron 40.0%
TCAGGTTACATCTGGAGATT+TGG - chr5.1:48094980-48094999 MS.gene010244:intron 40.0%
TCGGTATACCGAGTTATCAA+TGG - chr5.1:48091150-48091169 MS.gene010244:CDS 40.0%
TCTTATGTGAGAGGTCTTCA+AGG - chr5.1:48091987-48092006 MS.gene010244:intron 40.0%
TGCTCACACCTTTAATAGAG+TGG + chr5.1:48092909-48092928 None:intergenic 40.0%
TGGAAATCCAGTGAAACAGT+TGG - chr5.1:48096124-48096143 MS.gene010244:CDS 40.0%
TGTGCTTACAACCGTGTTAA+TGG - chr5.1:48092606-48092625 MS.gene010244:CDS 40.0%
TTAGTACTTACCCAATCTCG+GGG - chr5.1:48091589-48091608 MS.gene010244:intron 40.0%
TTGCACGGTGTTTCTTATGT+TGG - chr5.1:48091185-48091204 MS.gene010244:CDS 40.0%
! AAGGAGATTCCTTTGAAGGT+GGG - chr5.1:48092006-48092025 MS.gene010244:intron 40.0%
! AAGGGGAAGAATTTTGTACG+TGG + chr5.1:48091020-48091039 None:intergenic 40.0%
! ACTTTGGTACCGAATCAGTA+AGG - chr5.1:48091292-48091311 MS.gene010244:CDS 40.0%
! AGGGGAAGAATTTTGTACGT+GGG + chr5.1:48091019-48091038 None:intergenic 40.0%
! AGGGTATTTACTCTTGGAAG+TGG + chr5.1:48094391-48094410 None:intergenic 40.0%
! AGGTGGTTATTTGTTGGTTG+TGG - chr5.1:48096262-48096281 MS.gene010244:CDS 40.0%
! ATCCAGTGAAACAGTTGGTA+GGG - chr5.1:48096129-48096148 MS.gene010244:CDS 40.0%
! CCATCATTGATGGCTTAGAA+TGG + chr5.1:48093500-48093519 None:intergenic 40.0%
! CTCTATTAAAGGTGTGAGCA+TGG - chr5.1:48092909-48092928 MS.gene010244:CDS 40.0%
! GAAGAATTTTGTACGTGGGT+TGG + chr5.1:48091015-48091034 None:intergenic 40.0%
! GCACGGTCAATTTGAGATAT+GGG + chr5.1:48094193-48094212 None:intergenic 40.0%
! GGTGGTTATTTGTTGGTTGT+GGG - chr5.1:48096263-48096282 MS.gene010244:CDS 40.0%
! GTATTGAGTGGGTTCATACA+TGG - chr5.1:48091662-48091681 MS.gene010244:intron 40.0%
! TATCGTTCTGGATGTACTGA+TGG - chr5.1:48094532-48094551 MS.gene010244:CDS 40.0%
! TGGCTTGCCTCATATATATG+GGG + chr5.1:48093480-48093499 None:intergenic 40.0%
! TGGTATATGGTTTGAGACCT+TGG - chr5.1:48091620-48091639 MS.gene010244:intron 40.0%
! TTATTTGTTGGTTGTGGGAG+AGG - chr5.1:48096268-48096287 MS.gene010244:CDS 40.0%
!! ACTCCAAGGGTATTTACTCT+TGG + chr5.1:48094397-48094416 None:intergenic 40.0%
!! ACTGATTCGGTACCAAAGTT+TGG + chr5.1:48091291-48091310 None:intergenic 40.0%
!! ATGCACTAGCCAGTTTTGTA+GGG + chr5.1:48092242-48092261 None:intergenic 40.0%
!! CTGATTCGGTACCAAAGTTT+GGG + chr5.1:48091290-48091309 None:intergenic 40.0%
!! TATGCACTAGCCAGTTTTGT+AGG + chr5.1:48092243-48092262 None:intergenic 40.0%
!! TCTTTTGGGTACCATGTCAT+TGG + chr5.1:48095744-48095763 None:intergenic 40.0%
!!! CCATTTTTTCCTTGCCGTAT+TGG + chr5.1:48092664-48092683 None:intergenic 40.0%
!!! GTTTTCGAGTATCGAATGAG+TGG + chr5.1:48095952-48095971 None:intergenic 40.0%
AACCCTACCAACTGTTTCAC+TGG + chr5.1:48096134-48096153 None:intergenic 45.0%
AAGAGGACAAGAAACAGCTG+GGG - chr5.1:48091932-48091951 MS.gene010244:intron 45.0%
AAGGTCTACGAATTCGGCTA+TGG - chr5.1:48095855-48095874 MS.gene010244:intron 45.0%
ACAAAACTCGGGTATCTGCT+TGG + chr5.1:48091759-48091778 None:intergenic 45.0%
ACAATGCTGGACAAGCTCAA+GGG - chr5.1:48091859-48091878 MS.gene010244:intron 45.0%
ACATCAGCTACAACATCCTC+TGG + chr5.1:48093157-48093176 None:intergenic 45.0%
AGAACCTACCGTTTCTACAC+AGG - chr5.1:48095828-48095847 MS.gene010244:intron 45.0%
AGCCAGACACATTATCGTTC+TGG - chr5.1:48094520-48094539 MS.gene010244:intron 45.0%
ATGAGAGCTGATCCATCATC+AGG - chr5.1:48095795-48095814 MS.gene010244:intron 45.0%
ATGCCCATCATAGTCTCCAT+TGG - chr5.1:48093530-48093549 MS.gene010244:intron 45.0%
CATTAGGGCCTATAACTCCA+AGG + chr5.1:48094411-48094430 None:intergenic 45.0%
CCTCATATATATGGGGAGTG+GGG + chr5.1:48093473-48093492 None:intergenic 45.0%
CCTTTGGACCTGTGTAGAAA+CGG + chr5.1:48095839-48095858 None:intergenic 45.0%
GAAGAGGACAAGAAACAGCT+GGG - chr5.1:48091931-48091950 MS.gene010244:intron 45.0%
GAAGGTGGGAAACTAATTGG+AGG - chr5.1:48092020-48092039 MS.gene010244:intron 45.0%
GAGCCAAAGACATTGTGTCA+CGG - chr5.1:48091069-48091088 MS.gene010244:CDS 45.0%
GCAGCCGTAAGAATGATTTG+AGG + chr5.1:48091257-48091276 None:intergenic 45.0%
GCCTCATATATATGGGGAGT+GGG + chr5.1:48093474-48093493 None:intergenic 45.0%
GGTCCAAAGGTCTACGAATT+CGG - chr5.1:48095849-48095868 MS.gene010244:intron 45.0%
GGTTACATCTGGAGATTTGG+CGG - chr5.1:48094983-48095002 MS.gene010244:intron 45.0%
GTAGAAACGGTAGGTTCTAC+CGG + chr5.1:48095826-48095845 None:intergenic 45.0%
GTATCGAATGAGTGGTTGAC+TGG + chr5.1:48095944-48095963 None:intergenic 45.0%
GTGTTTCCGTCTCTTGACTT+TGG + chr5.1:48094642-48094661 None:intergenic 45.0%
TACAATGCTGGACAAGCTCA+AGG - chr5.1:48091858-48091877 MS.gene010244:intron 45.0%
TAGAAACGGTAGGTTCTACC+GGG + chr5.1:48095825-48095844 None:intergenic 45.0%
TAGCCGAATTCGTAGACCTT+TGG + chr5.1:48095855-48095874 None:intergenic 45.0%
TCTTGGAAGTGGGAGAATTG+AGG + chr5.1:48094380-48094399 None:intergenic 45.0%
TGCACGCAGTTATGTAGTTG+TGG - chr5.1:48095107-48095126 MS.gene010244:CDS 45.0%
TGCCTCATATATATGGGGAG+TGG + chr5.1:48093475-48093494 None:intergenic 45.0%
TGCTTACTAAATGGGTGCAC+AGG + chr5.1:48095286-48095305 None:intergenic 45.0%
TGGAGATGTCACAGGAGTAA+GGG + chr5.1:48090995-48091014 None:intergenic 45.0%
TGGCTCTTTGAGTGATGGTA+AGG + chr5.1:48091055-48091074 None:intergenic 45.0%
TGGTGGAATGAAGCTTTGCA+CGG - chr5.1:48091170-48091189 MS.gene010244:CDS 45.0%
TTCTTGCAGCTTCAAGAGCA+AGG + chr5.1:48094330-48094349 None:intergenic 45.0%
TTGGAGATGTCACAGGAGTA+AGG + chr5.1:48090996-48091015 None:intergenic 45.0%
! AAATGAGAGTGGTGTCAAGG+TGG - chr5.1:48096232-48096251 MS.gene010244:CDS 45.0%
! AAGCTCAAGGGATGACGTTT+TGG - chr5.1:48091871-48091890 MS.gene010244:intron 45.0%
! ACAAATACTGGAAGCATGGC+TGG - chr5.1:48096056-48096075 MS.gene010244:CDS 45.0%
! AGCAAATGAGAGTGGTGTCA+AGG - chr5.1:48096229-48096248 MS.gene010244:CDS 45.0%
! AGCTCAAGGGATGACGTTTT+GGG - chr5.1:48091872-48091891 MS.gene010244:intron 45.0%
! CAAATACTGGAAGCATGGCT+GGG - chr5.1:48096057-48096076 MS.gene010244:CDS 45.0%
! CAAGGAGATTCCTTTGAAGG+TGG - chr5.1:48092005-48092024 MS.gene010244:intron 45.0%
! GGCACGGTCAATTTGAGATA+TGG + chr5.1:48094194-48094213 None:intergenic 45.0%
! GTGTTTGGTGACTATAACCC+TGG - chr5.1:48094865-48094884 MS.gene010244:intron 45.0%
! TGGTTGACTGGTTGATGTGA+AGG + chr5.1:48095932-48095951 None:intergenic 45.0%
!! ATCATTTGGGCTGGTTATCC+TGG - chr5.1:48094811-48094830 MS.gene010244:intron 45.0%
!! ATGGAGACTATGATGGGCAT+TGG + chr5.1:48093530-48093549 None:intergenic 45.0%
!! GCGTACAAGAGTTGGTGAAT+CGG + chr5.1:48090973-48090992 None:intergenic 45.0%
!! GTAATTATAGGCGTCGGTGT+CGG + chr5.1:48091398-48091417 None:intergenic 45.0%
!! GTCTTTGGCTCTTTGAGTGA+TGG + chr5.1:48091060-48091079 None:intergenic 45.0%
!! TGGAGACTATGATGGGCATT+GGG + chr5.1:48093529-48093548 None:intergenic 45.0%
!!! TTTATTGTTTATTTTATATT+GGG - chr5.1:48095231-48095250 MS.gene010244:CDS 5.0%
!!! TTTTATTGTTTATTTTATAT+TGG - chr5.1:48095230-48095249 MS.gene010244:CDS 5.0%
AACAGCTGGGGAAGATCCTT+TGG - chr5.1:48091944-48091963 MS.gene010244:intron 50.0%
ATCCTGGTGAAACTGGTGGA+AGG - chr5.1:48094827-48094846 MS.gene010244:intron 50.0%
CAGCTTCAAGAGCAAGGTCT+AGG + chr5.1:48094324-48094343 None:intergenic 50.0%
CATAGACACCGAACACGACA+AGG + chr5.1:48091469-48091488 None:intergenic 50.0%
CATCGGAAAACCCCGAGATT+GGG + chr5.1:48091602-48091621 None:intergenic 50.0%
CATTGTGTCACGGCTCACAT+TGG - chr5.1:48091079-48091098 MS.gene010244:CDS 50.0%
CCCCACTCCCCATATATATG+AGG - chr5.1:48093470-48093489 MS.gene010244:intron 50.0%
CCGTTTCTACACAGGTCCAA+AGG - chr5.1:48095836-48095855 MS.gene010244:intron 50.0%
CTGACGTGACCGAATACTTC+AGG + chr5.1:48091733-48091752 None:intergenic 50.0%
GAATTGTAGGCCACACTCCA+AGG + chr5.1:48091640-48091659 None:intergenic 50.0%
GAGCCGTGACACAATGTCTT+TGG + chr5.1:48091075-48091094 None:intergenic 50.0%
GAGGGAGACTACCAATGACA+TGG - chr5.1:48095730-48095749 MS.gene010244:intron 50.0%
GAGGTGGAAAGGGTGAAGTT+GGG - chr5.1:48096174-48096193 MS.gene010244:CDS 50.0%
GATCCATCATCAGGCTATCC+CGG - chr5.1:48095804-48095823 MS.gene010244:intron 50.0%
GCTCTTGAAGCTGCAAGAAG+TGG - chr5.1:48094331-48094350 MS.gene010244:intron 50.0%
GCTGGTTATCCTGGTGAAAC+TGG - chr5.1:48094820-48094839 MS.gene010244:intron 50.0%
GGAAGAGGACAAGAAACAGC+TGG - chr5.1:48091930-48091949 MS.gene010244:intron 50.0%
GGCTTCACAAACAGCAACAC+AGG + chr5.1:48096089-48096108 None:intergenic 50.0%
GGTGTCAAGGTGGTTGAAGA+AGG - chr5.1:48096242-48096261 MS.gene010244:CDS 50.0%
GGTTATCCTGGTGAAACTGG+TGG - chr5.1:48094823-48094842 MS.gene010244:intron 50.0%
GTAGCTGATGTACTTCGAGC+TGG - chr5.1:48093166-48093185 MS.gene010244:intron 50.0%
GTCAAGGTGGTTGAAGAAGG+TGG - chr5.1:48096245-48096264 MS.gene010244:CDS 50.0%
GTCAGTGTCCTTGTCGTGTT+CGG - chr5.1:48091458-48091477 MS.gene010244:CDS 50.0%
GTGAATCGGCATGAACGAGT+TGG + chr5.1:48090959-48090978 None:intergenic 50.0%
GTGAGCATGGCCTACTTAGT+TGG - chr5.1:48092922-48092941 MS.gene010244:CDS 50.0%
GTGATTGGAACTGAGGCTAG+AGG - chr5.1:48091831-48091850 MS.gene010244:intron 50.0%
TAACTCGGTATACCGAGTCG+AGG + chr5.1:48091146-48091165 None:intergenic 50.0%
TCCTGGTGAAACTGGTGGAA+GGG - chr5.1:48094828-48094847 MS.gene010244:intron 50.0%
TCTTGTCCTCTTCCCCATCT+TGG + chr5.1:48091924-48091943 None:intergenic 50.0%
TGAGGGAAACTAGTTGCAGC+TGG + chr5.1:48091239-48091258 None:intergenic 50.0%
TGGACCTGTGTAGAAACGGT+AGG + chr5.1:48095835-48095854 None:intergenic 50.0%
TGGGCCATGACCATCATTGA+TGG + chr5.1:48093510-48093529 None:intergenic 50.0%
! CGGGGTTTTCCGATGGTATA+TGG - chr5.1:48091607-48091626 MS.gene010244:intron 50.0%
! GAGTAAGGGCGTACAAGAGT+TGG + chr5.1:48090981-48091000 None:intergenic 50.0%
! GCTAGAGGAGTGTACAATGC+TGG - chr5.1:48091846-48091865 MS.gene010244:intron 50.0%
! GGTAGGGTTTGAGAGTGTGA+CGG - chr5.1:48096145-48096164 MS.gene010244:CDS 50.0%
! TAGTGTTACTGCACGCAGTC+AGG - chr5.1:48094962-48094981 MS.gene010244:intron 50.0%
! TCAGGGATGGATCTAGAGTG+TGG - chr5.1:48094118-48094137 MS.gene010244:intron 50.0%
! TGGTTTGAGACCTTGGAGTG+TGG - chr5.1:48091627-48091646 MS.gene010244:intron 50.0%
! TTTGAGAGTGTGACGGTGGA+AGG - chr5.1:48096152-48096171 MS.gene010244:CDS 50.0%
!! ATTGGAGGCATCATTTGGGC+TGG - chr5.1:48094802-48094821 MS.gene010244:intron 50.0%
ACGGTGGAAGGAGGTGGAAA+GGG - chr5.1:48096164-48096183 MS.gene010244:CDS 55.0%
AGGGATCCAAGATGGGGAAG+AGG - chr5.1:48091915-48091934 MS.gene010244:intron 55.0%
ATACCGAGTCGAGGAATGGC+AGG + chr5.1:48091137-48091156 None:intergenic 55.0%
CCATCGGAAAACCCCGAGAT+TGG + chr5.1:48091603-48091622 None:intergenic 55.0%
CGGTATACCGAGTCGAGGAA+TGG + chr5.1:48091141-48091160 None:intergenic 55.0%
CTACCGGGATAGCCTGATGA+TGG + chr5.1:48095810-48095829 None:intergenic 55.0%
GCACGCAGTCAGGTTACATC+TGG - chr5.1:48094972-48094991 MS.gene010244:intron 55.0%
GGAGGTGGAAAGGGTGAAGT+TGG - chr5.1:48096173-48096192 MS.gene010244:CDS 55.0%
TGAAACTGGTGGAAGGGCTC+TGG - chr5.1:48094834-48094853 MS.gene010244:intron 55.0%
! AGGGTTTGAGAGTGTGACGG+TGG - chr5.1:48096148-48096167 MS.gene010244:CDS 55.0%
! CCAATCTCGGGGTTTTCCGA+TGG - chr5.1:48091600-48091619 MS.gene010244:intron 55.0%
! GCTCTGGCTCAGGTTGTGTT+TGG - chr5.1:48094850-48094869 MS.gene010244:intron 55.0%
!! ACGTGGGTTGGAGATGTCAC+AGG + chr5.1:48091003-48091022 None:intergenic 55.0%
AGTGTGACGGTGGAAGGAGG+TGG - chr5.1:48096158-48096177 MS.gene010244:CDS 60.0%
GACGGTGGAAGGAGGTGGAA+AGG - chr5.1:48096163-48096182 MS.gene010244:CDS 60.0%
GCCCTTCCACCAGTTTCACC+AGG + chr5.1:48094832-48094851 None:intergenic 60.0%
GCTCCTGCCATTCCTCGACT+CGG - chr5.1:48091131-48091150 MS.gene010244:CDS 60.0%
! GAGAGTGTGACGGTGGAAGG+AGG - chr5.1:48096155-48096174 MS.gene010244:CDS 60.0%
! TGGTGGAAGGGCTCTGGCTC+AGG - chr5.1:48094840-48094859 MS.gene010244:intron 65.0%
!! GTCGGTGTCGGACACGACAC+AGG + chr5.1:48091386-48091405 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 48090900 48096319 48090900 ID=MS.gene010244
chr5.1 mRNA 48090900 48096319 48090900 ID=MS.gene010244.t1;Parent=MS.gene010244
chr5.1 exon 48095906 48096319 48095906 ID=MS.gene010244.t1.exon1;Parent=MS.gene010244.t1
chr5.1 CDS 48095906 48096319 48095906 ID=cds.MS.gene010244.t1;Parent=MS.gene010244.t1
chr5.1 exon 48095086 48095388 48095086 ID=MS.gene010244.t1.exon2;Parent=MS.gene010244.t1
chr5.1 CDS 48095086 48095388 48095086 ID=cds.MS.gene010244.t1;Parent=MS.gene010244.t1
chr5.1 exon 48094525 48094694 48094525 ID=MS.gene010244.t1.exon3;Parent=MS.gene010244.t1
chr5.1 CDS 48094525 48094694 48094525 ID=cds.MS.gene010244.t1;Parent=MS.gene010244.t1
chr5.1 exon 48094032 48094129 48094032 ID=MS.gene010244.t1.exon4;Parent=MS.gene010244.t1
chr5.1 CDS 48094032 48094129 48094032 ID=cds.MS.gene010244.t1;Parent=MS.gene010244.t1
chr5.1 exon 48092333 48093097 48092333 ID=MS.gene010244.t1.exon5;Parent=MS.gene010244.t1
chr5.1 CDS 48092333 48093097 48092333 ID=cds.MS.gene010244.t1;Parent=MS.gene010244.t1
chr5.1 exon 48090900 48091489 48090900 ID=MS.gene010244.t1.exon6;Parent=MS.gene010244.t1
chr5.1 CDS 48090900 48091489 48090900 ID=cds.MS.gene010244.t1;Parent=MS.gene010244.t1
Gene Sequence

>MS.gene010244

ATGGCCCAATTTTCCATCACCATTACTTTCATTTTTCTCTTCTTAACTCGCTACAACCAACTCGTTCATGCCGATTCACCAACTCTTGTACGCCCTTACTCCTGTGACATCTCCAACCCACGTACAAAATTCTTCCCCTTTTGCAATCTCAACCTTACCATCACTCAAAGAGCCAAAGACATTGTGTCACGGCTCACATTGGATGAGAAAATCTCTCAACTCGTTAACACAGCTCCTGCCATTCCTCGACTCGGTATACCGAGTTATCAATGGTGGAATGAAGCTTTGCACGGTGTTTCTTATGTTGGTAAGGGGATAATATTGAATGGTAGTATTCCAGCTGCAACTAGTTTCCCTCAAATCATTCTTACGGCTGCTTCTTTTGATCCCAAACTTTGGTACCGAATCAGTAAGGTCAGTAACTCTTTTAACCCATGTTTGACAAAATGTTGTTGGTTGAAACACTTCTTGAATTAGGCGTGTCCTGTGTCGTGTCCGACACCGACGCCTATAATTACATTGAATTATGTGATTTTCTCAAATTATTAGCGTGTCGGGGTCAGTGTCCTTGTCGTGTTCGGTGTCTATGTCCGTATCTGTGCTTCGTTTCATTCAAATCATTTAACCCATATTTGGATTTTTTTGAAGATTAAAATTATATTTTTCATTTAGTATTTAGTAAATAAGTTTTAGTACTTACCCAATCTCGGGGTTTTCCGATGGTATATGGTTTGAGACCTTGGAGTGTGGCCTACAATTCTAGTATTGAGTGGGTTCATACATGGTTATGATTTCAAATAAATTCTACTACTGGGCGGTGAGATTAGTCTCCTGAAGTATTCGGTCACGTCAGTCACCAAGCAGATACCCGAGTTTTGTTTGTATTGTAATTTGTAATTTGTAATTATTATTATGTGTTGTATGAATGAAGGTGATTGGAACTGAGGCTAGAGGAGTGTACAATGCTGGACAAGCTCAAGGGATGACGTTTTGGGCACCAAACATAAACATATTTAGGGATCCAAGATGGGGAAGAGGACAAGAAACAGCTGGGGAAGATCCTTTGGTAAATTCAAAGTATGGTGTTTCTTATGTGAGAGGTCTTCAAGGAGATTCCTTTGAAGGTGGGAAACTAATTGGAGGTCGTCTTAAAGCTTCTGCTTGTTGCAAACACTTTACTGCCTATGATTTGGAAAATTGGAAGGGTGTGAATCGTTATGTTTTTGATGCCAAAGTAAGTTTTCTTTTCTCTATGGTTTAGTCCTAGGGTGATTAATTCTATGGTGAACAAATAAGATAAGTCTAGTATTCTTAAAATCGTGGTTGGAGTCTAACACAACCCTACAAAACTGGCTAGTGCATATTAGACAATGTCGTCCTCGACTTTGTCTTTTAGTTTTGTTTGTTGTGTTGTGCAGACTGCAAAGCATGCTTTGTTTTATGTCGTTGTTGAATCCTTGGAAATTGAATCATGACTTGCAAAAGAACAGTTAATTTAATTTTGAAATTCAAAAATTATATGAAACCTTTTCTATATACTGTTATGCTAATGATTCTTATTCTTATATTCTTCAACTTTTAACTTTTTTCCATTTTAATAATCCAAATCCATTCTAATAATTCAGGTTACTTTACAAGATTTGGCGGATACGTATCAACCCTCGTTTCATAGTTGCATAGAACAAGGACGATCTAGTGGAATAATGTGTGCTTACAACCGTGTTAATGGAGTTCCAAACTGTGCAGATTACAATCTTTTAACCAATACGGCAAGGAAAAAATGGAATTTCAATGGGTATATATAATTATTTCAATTTTTTTTTGTTAATTCTTTAATCTACTTTTTAGTTCTTATAAATTACAAAAGTGGAAACACAAAATATGTAGTTTTGTAATTTTTAGATATTTAAAAGTGAGTACAAAAATGTAAATTTTATAAGAATTCAACAATATATTTAAAAACATATCTTCTATTAAACAATATCTCCTTTATGAAACAATGTTTTCCACTCTATTAAAGGTGTGAGCATGGCCTACTTAGTTGGTGAAACAGTTTTCAATTCAAACTTTTCAGTTTTCTCTCCTCTTTTTGAAGCTACATATTTATAATGTATGATTCATCAAAATGTGAAATTGAAATTTAATTTTTAATTACTTGATTAGTATGAATGATTTTGGCCGTTAAATCAGGTATATTGCGTCGGATTGTGACGCAGTTCGATACATATATGAGAAACAAGGTTATGCAAAAACACCAGAGGATGTTGTAGCTGATGTACTTCGAGCTGGTATACTTTCACTCTTCCTTTGTTTATGTCATAATCAGAAGTAGATAAATAGAATTATTATGTGTTTACGGATTCTTATCAAAATTTACTTGAACTTTTATGTGTTTTAGAATTGATTTATAACTCTAAATGAAATCACAGCAATGACAATGTGACCTTAAAATATCGTTATCTTACTTTATCAATGGTCTCAATGTAAGGTACTTTTCTCATTAGTATTTTTGTCGGTTTACAATTTTTGCTTATATTAAGTCACATGGTTTGGCCTACATTTTCATTAGACCCCACTCCCCATATATATGAGGCAAGCCATTCTAAGCCATCAATGATGGTCATGGCCCAATGCCCATCATAGTCTCCATTGGAAAAAAGTTGGTGATAATGTAGATTTGTAAACAATTTATATGTGTATTTTCAGCATAGTTTGTAGTATAGGTTGCAGACAAAGATGTAACATAATTAGAGGTATGTTCGTAAATAAATAAATAATGAACATAATTAGATAGTATTTTGATCGTCATCACTTAGTTGTTTCAGTTCTGGTTTAGTTAAAGTTGTGACTTCCTTCTTCTTTTGTATTCTGTTTGCAACTGTCTAAGATAAATTAAGATTCATTCATGCACTCTAAAGTTTTATGATTGCATACTTGTCTTAATTTTACTCAATTTGGACATTTACTACTAAGCTTTATAATCACCCTTTCTTTGCCTTAGTTATCTTTATTTTGCAACAGAACCTCAGAATTAGCCTATGTTTAGGAGAATCATGTTGTACTACCGTTATTTCGGCACATGATATACTTTAGAACTTTTCAACAAAATCATAGTATCATTGTAATTTTGTCAAACTCGCCATAATTTCAAACATACACAAGTAATATTATAATTTTGATGAACCGTGGCAATTTACATGTTGCGTGATCAAAAATTTTCAGGGATGGATCTAGAGTGTGGTGATTACATGACAAAGTATGCAAAGTCAGTAGTATTACAAAAAAAAATTCCCATATCTCAAATTGACCGTGCCCTACACAATCTGTTTACCATTAGAATAAGACTAGGTTTGTTTGATGGGAATCCAACCAAACTTCAATATGGCAGAATTGGTCCAAATCAAGTATGCTCTAAAGAAAACCTAGACCTTGCTCTTGAAGCTGCAAGAAGTGGCATTGTACTTTTAAAAAACACTGCCTCAATTCTCCCACTTCCAAGAGTAAATACCCTTGGAGTTATAGGCCCTAATGCCAATAAATCATCAATAGTTCTTTTAGCAAACTATTTTGGTCCTCCTTGTAAACAAGTATCCATATTAAAAGGCTTTTACAGTTATGCTAGCCAGACACATTATCGTTCTGGATGTACTGATGGAGTAAAGTGTGCTTCAGCTGAAATTGACCGAGCAGTTGAAGTTGCTAAAATAAGTGATTATGTTATTTTGGTTATGGGATTGGACCAAAGTCAAGAGACGGAAACACTTGATAGAGTTCATTTAGAGTTACCTGGTAAGCAACAGAAACTTATTAACAGTGTTGCTAAAGCTTCTAAGAAGCCTGTTATTTTGGTAATTTTGTGTGGTGGTCCTGTTGATATTACTTTTGCTAAGAATAATGACAAAATTGGAGGCATCATTTGGGCTGGTTATCCTGGTGAAACTGGTGGAAGGGCTCTGGCTCAGGTTGTGTTTGGTGACTATAACCCTGGTTAGTTTTCTTCTGTCTTATCCATGAACAAATAAACATACATAATGTGGTAAAAAAATGGATTTGGATTGTTTGTAGTGTTACTGCACGCAGTCAGGTTACATCTGGAGATTTGGCGGTTCAGATTTCAATGACGATTTTGATTTTTTTTAAAATGTAAAATATCAAGTTTGAAATGTAGACCGCTCAATCTTGATTGAATGGTTCACGTCTTGCTAACTGCACGCAGTTATGTAGTTGTGGCTGCGCATGACCAAGATCCTTTAAACATGTATAAACTTCATAGATTCTGAAAAGTCTTAATTATTAAATGAGAGAATATTTAGTTAGGCAAAAAGAATTTTTTTATTGTTTATTTTATATTGGGAAACAAGAGTCTGAAAAATTAGCTTCGATCCTGTGCACCCATTTAGTAAGCACAACTAAATCTCAATTACTGGATGCGGAATGAACCTTGAACCAACGATAGAGATTTGGTTGAATTGACTAGATGGCAGCAGAGTATCCAGATTCCAAGAAAATAGTTAAGGTCGCAACCACAATTGCAGCTACAAAGTCTTCATGTCATAGTATTTAAAAATTGTCTGCAACTGTGATTGTGACCGCAAACAAACACTATTTTCTATACCATGTATGTAGCAATTTGATATATATTCAACAAATGTTTTCAATGTTACTTAAAAGTGTCCACAATTGAAAACATTGATTATAGTGTTGTATGATTTGTCTTGTTGACCGAAATACATTGTATATATCCCCCAAATAACTTTTTCTAGTATATTTTCCTAAAACTACTATTTCTCAACTAATGTGATGCTTTGATATTTTATCATTGCAATGCAGGAGGGAGACTACCAATGACATGGTACCCAAAAGATTTCATCAAAATACCAATGACAGACATGAGAATGAGAGCTGATCCATCATCAGGCTATCCCGGTAGAACCTACCGTTTCTACACAGGTCCAAAGGTCTACGAATTCGGCTATGGCCTAAGCTTCTCAAATTATTCCTACAACTTCATTTCCGTCAAAAACAACAACCTTCACATCAACCAGTCAACCACTCATTCGATACTCGAAAACTCTGAAACAATCCGTTACAAACTTGTTTCAGAGTTAGGCAAAAAAGCATGTAAAACCATGTCCATTTCTGTAACATTGGGAATTACAAATACTGGAAGCATGGCTGGGAAACATCCTGTGTTGCTGTTTGTGAAGCCAAAGAAAGGTAGAAATGGAAATCCAGTGAAACAGTTGGTAGGGTTTGAGAGTGTGACGGTGGAAGGAGGTGGAAAGGGTGAAGTTGGGTTCGAAGTTAGTGTTTGTGAGCATCTTAGTAGAGCAAATGAGAGTGGTGTCAAGGTGGTTGAAGAAGGTGGTTATTTGTTGGTTGTGGGAGAGGAAGAGTACTCAATAAGTATCACTCTTTGA
Protein sequence

>MS.gene010244.t1

MAQFSITITFIFLFLTRYNQLVHADSPTLVRPYSCDISNPRTKFFPFCNLNLTITQRAKDIVSRLTLDEKISQLVNTAPAIPRLGIPSYQWWNEALHGVSYVGKGIILNGSIPAATSFPQIILTAASFDPKLWYRISKVIGTEARGVYNAGQAQGMTFWAPNINIFRDPRWGRGQETAGEDPLVNSKYGVSYVRGLQGDSFEGGKLIGGRLKASACCKHFTAYDLENWKGVNRYVFDAKVTLQDLADTYQPSFHSCIEQGRSSGIMCAYNRVNGVPNCADYNLLTNTARKKWNFNGYIASDCDAVRYIYEKQGYAKTPEDVVADVLRAGMDLECGDYMTKYAKSVVLQKKIPISQIDRALHNLFTIRIRLGLFDGNPTKLQYGRIGPNQVCSKENLDLALEAARSGIVLLKNTASILPLPRVNTLGVIGPNANKSSIVLLANYFGPPCKQVSILKGFYSYASQTHYRSGCTDGVKCASAEIDRAVEVAKISDYVILVMGLDQSQETETLDRVHLELPGKQQKLINSVAKASKKPVILVILCGGPVDITFAKNNDKIGGIIWAGYPGETGGRALAQVVFGDYNPGGRLPMTWYPKDFIKIPMTDMRMRADPSSGYPGRTYRFYTGPKVYEFGYGLSFSNYSYNFISVKNNNLHINQSTTHSILENSETIRYKLVSELGKKACKTMSISVTLGITNTGSMAGKHPVLLFVKPKKGRNGNPVKQLVGFESVTVEGGGKGEVGFEVSVCEHLSRANESGVKVVEEGGYLLVVGEEEYSISITL