Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55865.t1 | XP_003630614.1 | 97.5 | 285 | 7 | 0 | 1 | 285 | 1 | 285 | 8.40E-150 | 539.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55865.t1 | Q9CAF5 | 71.9 | 249 | 70 | 0 | 34 | 282 | 89 | 337 | 3.3e-102 | 372.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55865.t1 | G7LIW2 | 97.5 | 285 | 7 | 0 | 1 | 285 | 1 | 285 | 6.1e-150 | 539.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene55865 | 0.823065 | 1.69E-53 | -1.69E-46 |
| MS.gene049171 | MS.gene55865 | 0.904034 | 1.87E-79 | -1.69E-46 |
| MS.gene049173 | MS.gene55865 | 0.901529 | 2.44E-78 | -1.69E-46 |
| MS.gene049217 | MS.gene55865 | 0.902169 | 1.28E-78 | -1.69E-46 |
| MS.gene049222 | MS.gene55865 | 0.891688 | 3.16E-74 | -1.69E-46 |
| MS.gene049232 | MS.gene55865 | 0.839321 | 1.70E-57 | -1.69E-46 |
| MS.gene049285 | MS.gene55865 | 0.921517 | 3.23E-88 | -1.69E-46 |
| MS.gene049320 | MS.gene55865 | 0.895385 | 1.01E-75 | -1.69E-46 |
| MS.gene04939 | MS.gene55865 | 0.849651 | 2.82E-60 | -1.69E-46 |
| MS.gene049427 | MS.gene55865 | 0.842374 | 2.69E-58 | -1.69E-46 |
| MS.gene049609 | MS.gene55865 | 0.860608 | 1.83E-63 | -1.69E-46 |
| MS.gene049627 | MS.gene55865 | 0.86838 | 6.81E-66 | -1.69E-46 |
| MS.gene049633 | MS.gene55865 | 0.898804 | 3.70E-77 | -1.69E-46 |
| MS.gene049805 | MS.gene55865 | 0.840513 | 8.31E-58 | -1.69E-46 |
| MS.gene049865 | MS.gene55865 | 0.816726 | 4.77E-52 | -1.69E-46 |
| MS.gene05010 | MS.gene55865 | 0.829488 | 5.01E-55 | -1.69E-46 |
| MS.gene050163 | MS.gene55865 | 0.917417 | 5.44E-86 | -1.69E-46 |
| MS.gene050165 | MS.gene55865 | 0.924464 | 6.80E-90 | -1.69E-46 |
| MS.gene050170 | MS.gene55865 | 0.813831 | 2.10E-51 | -1.69E-46 |
| MS.gene050323 | MS.gene55865 | 0.83741 | 5.28E-57 | -1.69E-46 |
| MS.gene050333 | MS.gene55865 | 0.938497 | 6.10E-99 | -1.69E-46 |
| MS.gene050444 | MS.gene55865 | 0.879467 | 1.22E-69 | -1.69E-46 |
| MS.gene050496 | MS.gene55865 | 0.82356 | 1.30E-53 | -1.69E-46 |
| MS.gene050504 | MS.gene55865 | 0.89381 | 4.44E-75 | -1.69E-46 |
| MS.gene050518 | MS.gene55865 | 0.903897 | 2.16E-79 | -1.69E-46 |
| MS.gene050538 | MS.gene55865 | 0.811425 | 7.05E-51 | -1.69E-46 |
| MS.gene050577 | MS.gene55865 | 0.858673 | 7.01E-63 | -1.69E-46 |
| MS.gene050593 | MS.gene55865 | 0.812278 | 4.59E-51 | -1.69E-46 |
| MS.gene050612 | MS.gene55865 | 0.914265 | 2.35E-84 | -1.69E-46 |
| MS.gene050675 | MS.gene55865 | 0.897851 | 9.41E-77 | -1.69E-46 |
| MS.gene050699 | MS.gene55865 | 0.888316 | 6.58E-73 | -1.69E-46 |
| MS.gene050747 | MS.gene55865 | 0.850709 | 1.42E-60 | -1.69E-46 |
| MS.gene050767 | MS.gene55865 | 0.814735 | 1.32E-51 | -1.69E-46 |
| MS.gene050770 | MS.gene55865 | 0.817642 | 2.97E-52 | -1.69E-46 |
| MS.gene050772 | MS.gene55865 | 0.900164 | 9.63E-78 | -1.69E-46 |
| MS.gene05079 | MS.gene55865 | -0.812518 | 4.07E-51 | -1.69E-46 |
| MS.gene05080 | MS.gene55865 | 0.871053 | 9.16E-67 | -1.69E-46 |
| MS.gene050868 | MS.gene55865 | 0.83971 | 1.35E-57 | -1.69E-46 |
| MS.gene050871 | MS.gene55865 | 0.835497 | 1.62E-56 | -1.69E-46 |
| MS.gene050876 | MS.gene55865 | 0.876587 | 1.24E-68 | -1.69E-46 |
| MS.gene05087 | MS.gene55865 | 0.830794 | 2.40E-55 | -1.69E-46 |
| MS.gene050904 | MS.gene55865 | 0.882796 | 7.71E-71 | -1.69E-46 |
| MS.gene050950 | MS.gene55865 | 0.850387 | 1.76E-60 | -1.69E-46 |
| MS.gene050986 | MS.gene55865 | 0.886831 | 2.43E-72 | -1.69E-46 |
| MS.gene05100 | MS.gene55865 | 0.873655 | 1.24E-67 | -1.69E-46 |
| MS.gene051138 | MS.gene55865 | -0.807526 | 4.84E-50 | -1.69E-46 |
| MS.gene051228 | MS.gene55865 | 0.872218 | 3.76E-67 | -1.69E-46 |
| MS.gene051268 | MS.gene55865 | 0.812476 | 4.16E-51 | -1.69E-46 |
| MS.gene051317 | MS.gene55865 | 0.877122 | 8.09E-69 | -1.69E-46 |
| MS.gene051366 | MS.gene55865 | -0.808756 | 2.65E-50 | -1.69E-46 |
| MS.gene051434 | MS.gene55865 | 0.853008 | 3.17E-61 | -1.69E-46 |
| MS.gene051551 | MS.gene55865 | 0.823427 | 1.39E-53 | -1.69E-46 |
| MS.gene051617 | MS.gene55865 | 0.823739 | 1.18E-53 | -1.69E-46 |
| MS.gene051651 | MS.gene55865 | -0.800687 | 1.28E-48 | -1.69E-46 |
| MS.gene051666 | MS.gene55865 | 0.834296 | 3.25E-56 | -1.69E-46 |
| MS.gene051694 | MS.gene55865 | 0.848223 | 7.03E-60 | -1.69E-46 |
| MS.gene051810 | MS.gene55865 | 0.907029 | 7.87E-81 | -1.69E-46 |
| MS.gene051838 | MS.gene55865 | 0.813157 | 2.95E-51 | -1.69E-46 |
| MS.gene051858 | MS.gene55865 | 0.882757 | 7.97E-71 | -1.69E-46 |
| MS.gene051874 | MS.gene55865 | 0.81229 | 4.57E-51 | -1.69E-46 |
| MS.gene051949 | MS.gene55865 | 0.89264 | 1.32E-74 | -1.69E-46 |
| MS.gene052129 | MS.gene55865 | -0.806717 | 7.18E-50 | -1.69E-46 |
| MS.gene052164 | MS.gene55865 | 0.859393 | 4.27E-63 | -1.69E-46 |
| MS.gene052271 | MS.gene55865 | 0.874826 | 4.98E-68 | -1.69E-46 |
| MS.gene052379 | MS.gene55865 | 0.857699 | 1.37E-62 | -1.69E-46 |
| MS.gene052482 | MS.gene55865 | 0.849116 | 3.97E-60 | -1.69E-46 |
| MS.gene052484 | MS.gene55865 | 0.819124 | 1.37E-52 | -1.69E-46 |
| MS.gene052486 | MS.gene55865 | 0.858616 | 7.29E-63 | -1.69E-46 |
| MS.gene052503 | MS.gene55865 | 0.812305 | 4.53E-51 | -1.69E-46 |
| MS.gene052506 | MS.gene55865 | 0.811029 | 8.59E-51 | -1.69E-46 |
| MS.gene052605 | MS.gene55865 | 0.81248 | 4.15E-51 | -1.69E-46 |
| MS.gene052615 | MS.gene55865 | 0.855481 | 6.13E-62 | -1.69E-46 |
| MS.gene052670 | MS.gene55865 | 0.839929 | 1.18E-57 | -1.69E-46 |
| MS.gene052822 | MS.gene55865 | 0.831993 | 1.22E-55 | -1.69E-46 |
| MS.gene052823 | MS.gene55865 | 0.800625 | 1.32E-48 | -1.69E-46 |
| MS.gene052870 | MS.gene55865 | 0.87063 | 1.26E-66 | -1.69E-46 |
| MS.gene052872 | MS.gene55865 | 0.885675 | 6.62E-72 | -1.69E-46 |
| MS.gene052916 | MS.gene55865 | 0.856805 | 2.51E-62 | -1.69E-46 |
| MS.gene052966 | MS.gene55865 | 0.872391 | 3.30E-67 | -1.69E-46 |
| MS.gene053009 | MS.gene55865 | 0.857437 | 1.63E-62 | -1.69E-46 |
| MS.gene053104 | MS.gene55865 | 0.804327 | 2.28E-49 | -1.69E-46 |
| MS.gene053203 | MS.gene55865 | 0.859198 | 4.88E-63 | -1.69E-46 |
| MS.gene053207 | MS.gene55865 | 0.868087 | 8.47E-66 | -1.69E-46 |
| MS.gene053213 | MS.gene55865 | 0.875509 | 2.91E-68 | -1.69E-46 |
| MS.gene053284 | MS.gene55865 | 0.856612 | 2.86E-62 | -1.69E-46 |
| MS.gene053285 | MS.gene55865 | 0.849278 | 3.58E-60 | -1.69E-46 |
| MS.gene053286 | MS.gene55865 | 0.874465 | 6.61E-68 | -1.69E-46 |
| MS.gene053322 | MS.gene55865 | 0.830614 | 2.66E-55 | -1.69E-46 |
| MS.gene053384 | MS.gene55865 | 0.812063 | 5.12E-51 | -1.69E-46 |
| MS.gene053420 | MS.gene55865 | -0.81798 | 2.49E-52 | -1.69E-46 |
| MS.gene053479 | MS.gene55865 | 0.820783 | 5.71E-53 | -1.69E-46 |
| MS.gene053480 | MS.gene55865 | 0.813346 | 2.68E-51 | -1.69E-46 |
| MS.gene053574 | MS.gene55865 | 0.848126 | 7.47E-60 | -1.69E-46 |
| MS.gene053632 | MS.gene55865 | 0.870884 | 1.04E-66 | -1.69E-46 |
| MS.gene053824 | MS.gene55865 | 0.854563 | 1.13E-61 | -1.69E-46 |
| MS.gene053916 | MS.gene55865 | 0.843768 | 1.14E-58 | -1.69E-46 |
| MS.gene054408 | MS.gene55865 | 0.823605 | 1.27E-53 | -1.69E-46 |
| MS.gene054595 | MS.gene55865 | 0.836026 | 1.19E-56 | -1.69E-46 |
| MS.gene054600 | MS.gene55865 | 0.89713 | 1.89E-76 | -1.69E-46 |
| MS.gene054642 | MS.gene55865 | 0.90927 | 6.86E-82 | -1.69E-46 |
| MS.gene05470 | MS.gene55865 | 0.853052 | 3.08E-61 | -1.69E-46 |
| MS.gene054927 | MS.gene55865 | 0.807911 | 4.01E-50 | -1.69E-46 |
| MS.gene054954 | MS.gene55865 | 0.897854 | 9.38E-77 | -1.69E-46 |
| MS.gene054959 | MS.gene55865 | -0.803069 | 4.16E-49 | -1.69E-46 |
| MS.gene05505 | MS.gene55865 | 0.813548 | 2.42E-51 | -1.69E-46 |
| MS.gene055154 | MS.gene55865 | -0.811049 | 8.50E-51 | -1.69E-46 |
| MS.gene055206 | MS.gene55865 | 0.858218 | 9.58E-63 | -1.69E-46 |
| MS.gene055212 | MS.gene55865 | 0.800183 | 1.62E-48 | -1.69E-46 |
| MS.gene055224 | MS.gene55865 | 0.818639 | 1.76E-52 | -1.69E-46 |
| MS.gene055362 | MS.gene55865 | 0.893921 | 4.00E-75 | -1.69E-46 |
| MS.gene055397 | MS.gene55865 | 0.847992 | 8.14E-60 | -1.69E-46 |
| MS.gene055499 | MS.gene55865 | 0.83308 | 6.55E-56 | -1.69E-46 |
| MS.gene055502 | MS.gene55865 | 0.895996 | 5.63E-76 | -1.69E-46 |
| MS.gene055577 | MS.gene55865 | 0.882482 | 1.00E-70 | -1.69E-46 |
| MS.gene055634 | MS.gene55865 | 0.859397 | 4.26E-63 | -1.69E-46 |
| MS.gene055636 | MS.gene55865 | 0.867885 | 9.83E-66 | -1.69E-46 |
| MS.gene055638 | MS.gene55865 | 0.886119 | 4.51E-72 | -1.69E-46 |
| MS.gene055647 | MS.gene55865 | 0.845271 | 4.51E-59 | -1.69E-46 |
| MS.gene055722 | MS.gene55865 | 0.880384 | 5.74E-70 | -1.69E-46 |
| MS.gene055748 | MS.gene55865 | 0.884198 | 2.35E-71 | -1.69E-46 |
| MS.gene055750 | MS.gene55865 | 0.862383 | 5.27E-64 | -1.69E-46 |
| MS.gene055751 | MS.gene55865 | 0.890685 | 7.88E-74 | -1.69E-46 |
| MS.gene055776 | MS.gene55865 | 0.841535 | 4.48E-58 | -1.69E-46 |
| MS.gene055849 | MS.gene55865 | 0.839881 | 1.21E-57 | -1.69E-46 |
| MS.gene05589 | MS.gene55865 | 0.862126 | 6.32E-64 | -1.69E-46 |
| MS.gene05592 | MS.gene55865 | 0.820172 | 7.89E-53 | -1.69E-46 |
| MS.gene055941 | MS.gene55865 | 0.860258 | 2.34E-63 | -1.69E-46 |
| MS.gene055956 | MS.gene55865 | -0.804683 | 1.92E-49 | -1.69E-46 |
| MS.gene056083 | MS.gene55865 | 0.858864 | 6.15E-63 | -1.69E-46 |
| MS.gene056374 | MS.gene55865 | 0.861147 | 1.26E-63 | -1.69E-46 |
| MS.gene056409 | MS.gene55865 | 0.842563 | 2.40E-58 | -1.69E-46 |
| MS.gene056449 | MS.gene55865 | 0.870245 | 1.69E-66 | -1.69E-46 |
| MS.gene056450 | MS.gene55865 | 0.815119 | 1.09E-51 | -1.69E-46 |
| MS.gene056487 | MS.gene55865 | 0.82141 | 4.10E-53 | -1.69E-46 |
| MS.gene056504 | MS.gene55865 | 0.869925 | 2.15E-66 | -1.69E-46 |
| MS.gene056510 | MS.gene55865 | 0.887964 | 8.98E-73 | -1.69E-46 |
| MS.gene056549 | MS.gene55865 | 0.876844 | 1.01E-68 | -1.69E-46 |
| MS.gene056550 | MS.gene55865 | -0.804178 | 2.45E-49 | -1.69E-46 |
| MS.gene056610 | MS.gene55865 | 0.839711 | 1.35E-57 | -1.69E-46 |
| MS.gene056657 | MS.gene55865 | 0.905399 | 4.47E-80 | -1.69E-46 |
| MS.gene056692 | MS.gene55865 | 0.904392 | 1.29E-79 | -1.69E-46 |
| MS.gene056856 | MS.gene55865 | -0.81429 | 1.66E-51 | -1.69E-46 |
| MS.gene056897 | MS.gene55865 | 0.837164 | 6.11E-57 | -1.69E-46 |
| MS.gene056898 | MS.gene55865 | 0.827158 | 1.83E-54 | -1.69E-46 |
| MS.gene056903 | MS.gene55865 | 0.830305 | 3.17E-55 | -1.69E-46 |
| MS.gene056910 | MS.gene55865 | 0.811642 | 6.32E-51 | -1.69E-46 |
| MS.gene056946 | MS.gene55865 | 0.825452 | 4.65E-54 | -1.69E-46 |
| MS.gene057076 | MS.gene55865 | 0.846668 | 1.88E-59 | -1.69E-46 |
| MS.gene057129 | MS.gene55865 | 0.858103 | 1.04E-62 | -1.69E-46 |
| MS.gene057146 | MS.gene55865 | 0.809809 | 1.57E-50 | -1.69E-46 |
| MS.gene057246 | MS.gene55865 | 0.828723 | 7.67E-55 | -1.69E-46 |
| MS.gene057331 | MS.gene55865 | 0.855427 | 6.35E-62 | -1.69E-46 |
| MS.gene057416 | MS.gene55865 | 0.86772 | 1.11E-65 | -1.69E-46 |
| MS.gene057658 | MS.gene55865 | 0.838853 | 2.25E-57 | -1.69E-46 |
| MS.gene057775 | MS.gene55865 | 0.809167 | 2.16E-50 | -1.69E-46 |
| MS.gene057831 | MS.gene55865 | 0.893523 | 5.81E-75 | -1.69E-46 |
| MS.gene057857 | MS.gene55865 | 0.829479 | 5.03E-55 | -1.69E-46 |
| MS.gene057926 | MS.gene55865 | 0.81187 | 5.64E-51 | -1.69E-46 |
| MS.gene057986 | MS.gene55865 | 0.801008 | 1.10E-48 | -1.69E-46 |
| MS.gene058019 | MS.gene55865 | 0.82484 | 6.49E-54 | -1.69E-46 |
| MS.gene058130 | MS.gene55865 | 0.804425 | 2.17E-49 | -1.69E-46 |
| MS.gene058334 | MS.gene55865 | -0.813046 | 3.12E-51 | -1.69E-46 |
| MS.gene058335 | MS.gene55865 | 0.83663 | 8.36E-57 | -1.69E-46 |
| MS.gene058338 | MS.gene55865 | 0.837512 | 4.98E-57 | -1.69E-46 |
| MS.gene05837 | MS.gene55865 | 0.838083 | 3.55E-57 | -1.69E-46 |
| MS.gene058419 | MS.gene55865 | 0.908319 | 1.95E-81 | -1.69E-46 |
| MS.gene058544 | MS.gene55865 | 0.86098 | 1.41E-63 | -1.69E-46 |
| MS.gene058719 | MS.gene55865 | 0.841834 | 3.74E-58 | -1.69E-46 |
| MS.gene058723 | MS.gene55865 | 0.888654 | 4.87E-73 | -1.69E-46 |
| MS.gene058773 | MS.gene55865 | 0.9179 | 3.02E-86 | -1.69E-46 |
| MS.gene058838 | MS.gene55865 | 0.870039 | 1.97E-66 | -1.69E-46 |
| MS.gene05883 | MS.gene55865 | 0.83491 | 2.28E-56 | -1.69E-46 |
| MS.gene058978 | MS.gene55865 | -0.808137 | 3.59E-50 | -1.69E-46 |
| MS.gene059022 | MS.gene55865 | 0.901424 | 2.72E-78 | -1.69E-46 |
| MS.gene059023 | MS.gene55865 | 0.894006 | 3.70E-75 | -1.69E-46 |
| MS.gene059029 | MS.gene55865 | 0.895973 | 5.76E-76 | -1.69E-46 |
| MS.gene059079 | MS.gene55865 | 0.893464 | 6.14E-75 | -1.69E-46 |
| MS.gene059102 | MS.gene55865 | -0.812126 | 4.96E-51 | -1.69E-46 |
| MS.gene05912 | MS.gene55865 | 0.859977 | 2.85E-63 | -1.69E-46 |
| MS.gene05913 | MS.gene55865 | 0.837361 | 5.44E-57 | -1.69E-46 |
| MS.gene05914 | MS.gene55865 | 0.810372 | 1.19E-50 | -1.69E-46 |
| MS.gene059181 | MS.gene55865 | 0.820487 | 6.68E-53 | -1.69E-46 |
| MS.gene05934 | MS.gene55865 | 0.84308 | 1.75E-58 | -1.69E-46 |
| MS.gene059526 | MS.gene55865 | -0.823865 | 1.10E-53 | -1.69E-46 |
| MS.gene059536 | MS.gene55865 | 0.836294 | 1.02E-56 | -1.69E-46 |
| MS.gene059677 | MS.gene55865 | 0.921579 | 2.99E-88 | -1.69E-46 |
| MS.gene059718 | MS.gene55865 | 0.905703 | 3.24E-80 | -1.69E-46 |
| MS.gene059756 | MS.gene55865 | 0.867624 | 1.19E-65 | -1.69E-46 |
| MS.gene059801 | MS.gene55865 | 0.866567 | 2.59E-65 | -1.69E-46 |
| MS.gene059858 | MS.gene55865 | 0.805513 | 1.29E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene55865 | 0.877593 | 5.55E-69 | -1.69E-46 |
| MS.gene059902 | MS.gene55865 | 0.874771 | 5.20E-68 | -1.69E-46 |
| MS.gene059960 | MS.gene55865 | 0.863568 | 2.27E-64 | -1.69E-46 |
| MS.gene06000 | MS.gene55865 | 0.8113 | 7.50E-51 | -1.69E-46 |
| MS.gene060193 | MS.gene55865 | 0.821904 | 3.15E-53 | -1.69E-46 |
| MS.gene060337 | MS.gene55865 | -0.802114 | 6.54E-49 | -1.69E-46 |
| MS.gene060341 | MS.gene55865 | 0.807761 | 4.32E-50 | -1.69E-46 |
| MS.gene060703 | MS.gene55865 | 0.879025 | 1.74E-69 | -1.69E-46 |
| MS.gene060727 | MS.gene55865 | 0.804508 | 2.09E-49 | -1.69E-46 |
| MS.gene060728 | MS.gene55865 | 0.823257 | 1.53E-53 | -1.69E-46 |
| MS.gene060762 | MS.gene55865 | 0.922116 | 1.49E-88 | -1.69E-46 |
| MS.gene060778 | MS.gene55865 | 0.803846 | 2.87E-49 | -1.69E-46 |
| MS.gene06077 | MS.gene55865 | 0.86602 | 3.87E-65 | -1.69E-46 |
| MS.gene060804 | MS.gene55865 | 0.800136 | 1.66E-48 | -1.69E-46 |
| MS.gene060818 | MS.gene55865 | 0.844617 | 6.77E-59 | -1.69E-46 |
| MS.gene060823 | MS.gene55865 | -0.830682 | 2.56E-55 | -1.69E-46 |
| MS.gene060835 | MS.gene55865 | 0.808302 | 3.31E-50 | -1.69E-46 |
| MS.gene06092 | MS.gene55865 | 0.854207 | 1.44E-61 | -1.69E-46 |
| MS.gene060981 | MS.gene55865 | 0.817892 | 2.60E-52 | -1.69E-46 |
| MS.gene060982 | MS.gene55865 | 0.875224 | 3.65E-68 | -1.69E-46 |
| MS.gene06111 | MS.gene55865 | 0.833009 | 6.82E-56 | -1.69E-46 |
| MS.gene061134 | MS.gene55865 | 0.82946 | 5.08E-55 | -1.69E-46 |
| MS.gene061150 | MS.gene55865 | 0.919024 | 7.54E-87 | -1.69E-46 |
| MS.gene061171 | MS.gene55865 | 0.846093 | 2.70E-59 | -1.69E-46 |
| MS.gene061200 | MS.gene55865 | 0.86617 | 3.47E-65 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene013566 | MS.gene55865 | PPI |
| MS.gene06894 | MS.gene55865 | PPI |
| MS.gene06683 | MS.gene55865 | PPI |
| MS.gene057128 | MS.gene55865 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55865.t1 | MTR_8g101390 | 97.544 | 285 | 7 | 0 | 1 | 285 | 1 | 285 | 0.0 | 564 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55865.t1 | AT3G10670 | 71.888 | 249 | 70 | 0 | 34 | 282 | 89 | 337 | 2.76e-133 | 381 |
| MS.gene55865.t1 | AT5G06530 | 29.817 | 218 | 132 | 6 | 27 | 230 | 147 | 357 | 6.66e-12 | 66.2 |
| MS.gene55865.t1 | AT5G06530 | 29.358 | 218 | 133 | 6 | 27 | 230 | 147 | 357 | 6.79e-12 | 66.2 |
| MS.gene55865.t1 | AT5G06530 | 29.358 | 218 | 133 | 6 | 27 | 230 | 147 | 357 | 6.79e-12 | 66.2 |
Find 72 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATCTTGCAGCTTGCAGTTT+TGG | 0.164666 | 4.3:+3772770 | MS.gene55865:CDS |
| GGCATTGGATTCAACGATTT+TGG | 0.194740 | 4.3:-3771724 | None:intergenic |
| CAATCACCTGTTGCAATTCC+TGG | 0.224835 | 4.3:+3771957 | MS.gene55865:CDS |
| CCTTCAAGGGCTCTTTCTTC+AGG | 0.248911 | 4.3:-3771918 | None:intergenic |
| AGGGGAAAATTTGCTTGAAA+TGG | 0.308468 | 4.3:+3771893 | MS.gene55865:CDS |
| AAATGATCAATTTCTTGTTA+TGG | 0.315799 | 4.3:+3771986 | MS.gene55865:CDS |
| ACCTCAAGGGGTCCAAGTTC+AGG | 0.361866 | 4.3:-3772041 | None:intergenic |
| TTGCGGCGAGTGTGTGATTT+GGG | 0.362619 | 4.3:-3771639 | None:intergenic |
| ATTAACGCCGCGGAGAATTT+CGG | 0.363663 | 4.3:-3771745 | None:intergenic |
| CCGCAAATTCGCCTGCTTTG+CGG | 0.385979 | 4.3:+3771656 | MS.gene55865:CDS |
| GGAGAAGAACGGAATTGAAA+TGG | 0.406711 | 4.3:-3771618 | None:intergenic |
| TTTGCGGCGAGTGTGTGATT+TGG | 0.406874 | 4.3:-3771640 | None:intergenic |
| GATTGGATGTTGATGCGCTC+AGG | 0.409831 | 4.3:+3772829 | MS.gene55865:CDS |
| CCACTAGTAACTTCATAATC+TGG | 0.412502 | 4.3:-3771855 | None:intergenic |
| CTCGAAGATCGTTGACTTGG+AGG | 0.414656 | 4.3:-3771701 | None:intergenic |
| CACTTTCGCTAAGGTTCTTG+TGG | 0.418543 | 4.3:+3771827 | MS.gene55865:CDS |
| CCGCAAAGCAGGCGAATTTG+CGG | 0.425082 | 4.3:-3771656 | None:intergenic |
| AAACTTGGTCTTCCTGAACT+TGG | 0.426220 | 4.3:+3772029 | MS.gene55865:CDS |
| GGTGCTCGCCGCCGCAAAGC+AGG | 0.429445 | 4.3:-3771667 | None:intergenic |
| ACCCTCCCATGTCCATGTTA+TGG | 0.431294 | 4.3:+3772941 | MS.gene55865:CDS |
| ACATTTCTATTGAGAAAGTC+AGG | 0.433555 | 4.3:-3772708 | None:intergenic |
| AGGCGAAATTCACGCTATCA+TGG | 0.454010 | 4.3:+3771782 | MS.gene55865:CDS |
| AACTCATGAAAAGACCTTCA+AGG | 0.456874 | 4.3:-3771932 | None:intergenic |
| AATGTCAACGAAGGGTTTAG+TGG | 0.459977 | 4.3:+3772726 | MS.gene55865:CDS |
| ACTTTCGCTAAGGTTCTTGT+GGG | 0.463802 | 4.3:+3771828 | MS.gene55865:CDS |
| AAGGACAGGCGACCTATCTA+TGG | 0.465705 | 4.3:+3774504 | MS.gene55865:CDS |
| GAAACACCAGGAATTGCAAC+AGG | 0.465860 | 4.3:-3771963 | None:intergenic |
| ATCATCAACAGAGAATTCTC+TGG | 0.472195 | 4.3:-3772885 | None:intergenic |
| GGATGAAATTGATTCGGGAT+TGG | 0.478013 | 4.3:+3772812 | MS.gene55865:CDS |
| CCTGAAGAAAGAGCCCTTGA+AGG | 0.481223 | 4.3:+3771918 | MS.gene55865:CDS |
| TGAGGCAGATGGATATGAAC+TGG | 0.490578 | 4.3:+3774537 | MS.gene55865:CDS |
| TTGTTATGGCTTATAATGCT+CGG | 0.498223 | 4.3:+3772000 | MS.gene55865:CDS |
| GCCGCGGAGAATTTCGGCAT+TGG | 0.498807 | 4.3:-3771739 | None:intergenic |
| TCCTGAACTTGGACCCCTTG+AGG | 0.506534 | 4.3:+3772040 | MS.gene55865:CDS |
| TGGCTCGAAGATCGTTGACT+TGG | 0.513953 | 4.3:-3771704 | None:intergenic |
| CAAATTCGCCTGCTTTGCGG+CGG | 0.518445 | 4.3:+3771659 | MS.gene55865:CDS |
| TGTTGATGCGCTCAGGGATG+TGG | 0.524984 | 4.3:+3772836 | MS.gene55865:CDS |
| TGGTAAAAGCACTTTCGCTA+AGG | 0.531262 | 4.3:+3771818 | MS.gene55865:CDS |
| CTCAATAGAAATGTCAACGA+AGG | 0.535504 | 4.3:+3772717 | MS.gene55865:CDS |
| TCATCAACAGAGAATTCTCT+GGG | 0.539796 | 4.3:-3772884 | None:intergenic |
| CAATTGCATCTACCATAGAT+AGG | 0.540712 | 4.3:-3774516 | None:intergenic |
| AACGGAAGAATTGCAAGGAC+AGG | 0.551372 | 4.3:+3774490 | MS.gene55865:CDS |
| ACTCATGAAAAGACCTTCAA+GGG | 0.552552 | 4.3:-3771931 | None:intergenic |
| ATCTATGGTAGATGCAATTG+AGG | 0.552780 | 4.3:+3774519 | MS.gene55865:CDS |
| GACTTGGAGGAGGGGAACCT+CGG | 0.553003 | 4.3:-3771688 | None:intergenic |
| AAATGAATAATGAACCTCAA+GGG | 0.553158 | 4.3:-3772054 | None:intergenic |
| TCAATAGAAATGTCAACGAA+GGG | 0.553262 | 4.3:+3772718 | MS.gene55865:CDS |
| TGTTGATGATTACTCACTAT+CGG | 0.557313 | 4.3:+3772898 | MS.gene55865:CDS |
| GAAGATCGTTGACTTGGAGG+AGG | 0.561738 | 4.3:-3771698 | None:intergenic |
| GGCGAAATTCACGCTATCAT+GGG | 0.562057 | 4.3:+3771783 | MS.gene55865:CDS |
| AATTGATCATTTGAAACACC+AGG | 0.564779 | 4.3:-3771975 | None:intergenic |
| GTAGATGCAATTGAGGCAGA+TGG | 0.567240 | 4.3:+3774526 | MS.gene55865:CDS |
| AACTTACCATAACATGGACA+TGG | 0.572749 | 4.3:-3772947 | None:intergenic |
| AAGATCGTTGACTTGGAGGA+GGG | 0.579227 | 4.3:-3771697 | None:intergenic |
| ATTGGATGTTGATGCGCTCA+GGG | 0.588735 | 4.3:+3772830 | MS.gene55865:CDS |
| ACCATAACATGGACATGGGA+GGG | 0.592038 | 4.3:-3772942 | None:intergenic |
| CTTTGCGGCGGCGAGCACCG+AGG | 0.592980 | 4.3:+3771671 | MS.gene55865:CDS |
| AATGCTCGGAGAAAGAAACT+TGG | 0.594310 | 4.3:+3772014 | MS.gene55865:CDS |
| AGATCGTTGACTTGGAGGAG+GGG | 0.602773 | 4.3:-3771696 | None:intergenic |
| AATGAATAATGAACCTCAAG+GGG | 0.611116 | 4.3:-3772053 | None:intergenic |
| CCAGATTATGAAGTTACTAG+TGG | 0.621960 | 4.3:+3771855 | MS.gene55865:CDS |
| TACCATAACATGGACATGGG+AGG | 0.624925 | 4.3:-3772943 | None:intergenic |
| CTTCTAAACTATCAGGACAA+CGG | 0.631876 | 4.3:+3774472 | MS.gene55865:intron |
| ACTTACCATAACATGGACAT+GGG | 0.633255 | 4.3:-3772946 | None:intergenic |
| GCTCAGGGATGTGGCAAGTG+CGG | 0.643242 | 4.3:+3772845 | MS.gene55865:CDS |
| GTCAACGAAGGGTTTAGTGG+AGG | 0.664376 | 4.3:+3772729 | MS.gene55865:CDS |
| AGGACAACGGAAGAATTGCA+AGG | 0.667405 | 4.3:+3774485 | MS.gene55865:intron |
| TGTGTGATTTGGGAGAAGAA+CGG | 0.680750 | 4.3:-3771629 | None:intergenic |
| GTTAATCTCACTATCAACAG+AGG | 0.703089 | 4.3:+3771762 | MS.gene55865:CDS |
| TGATAGTGAGATTAACGCCG+CGG | 0.730942 | 4.3:-3771755 | None:intergenic |
| TCCAATGCCGAAATTCTCCG+CGG | 0.749562 | 4.3:+3771738 | MS.gene55865:CDS |
| CATCAACAGAGAATTCTCTG+GGG | 0.787412 | 4.3:-3772883 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTATTTTTTATGGTAA+TGG | - | chr4.3:3773438-3773457 | None:intergenic | 10.0% |
| !! | CAAAAGAAAATTAGTAAAAA+AGG | - | chr4.3:3773303-3773322 | None:intergenic | 15.0% |
| !!! | AACTTCTTTGTTTTTTAAAA+CGG | + | chr4.3:3772374-3772393 | MS.gene55865:intron | 15.0% |
| !! | AAATGATCAATTTCTTGTTA+TGG | + | chr4.3:3771986-3772005 | MS.gene55865:CDS | 20.0% |
| !! | AACTATTTAGATAGATTTAG+AGG | + | chr4.3:3773605-3773624 | MS.gene55865:intron | 20.0% |
| !! | CTAAATCTATCTAAATAGTT+AGG | - | chr4.3:3773605-3773624 | None:intergenic | 20.0% |
| !! | TACATTATATGCTCATTTAT+TGG | + | chr4.3:3774132-3774151 | MS.gene55865:intron | 20.0% |
| !! | TGATAGTTTAGAAGAAAAAA+AGG | - | chr4.3:3774466-3774485 | None:intergenic | 20.0% |
| !!! | AATGTTTTGTTTAATGGTTT+AGG | + | chr4.3:3773937-3773956 | MS.gene55865:intron | 20.0% |
| !!! | ACCTTTTTAAATGAAATCAA+TGG | - | chr4.3:3774333-3774352 | None:intergenic | 20.0% |
| !!! | ATTTCATTTAAAAAGGTACA+TGG | + | chr4.3:3774336-3774355 | MS.gene55865:intron | 20.0% |
| !!! | GACTTATTTTAGCTTATTTA+TGG | + | chr4.3:3772240-3772259 | MS.gene55865:intron | 20.0% |
| !!! | TATTTTGGATGAAATTGATT+CGG | + | chr4.3:3772806-3772825 | MS.gene55865:CDS | 20.0% |
| !!! | TTTTTTTCTTCTAAACTATC+AGG | + | chr4.3:3774465-3774484 | MS.gene55865:intron | 20.0% |
| ! | AAATGAATAATGAACCTCAA+GGG | - | chr4.3:3772057-3772076 | None:intergenic | 25.0% |
| ! | AACTAAAATTGCAAGTTAGT+GGG | - | chr4.3:3774305-3774324 | None:intergenic | 25.0% |
| ! | AAGTCAGAAACCATAAAAAA+GGG | - | chr4.3:3772617-3772636 | None:intergenic | 25.0% |
| ! | AATGATTCTCCAAAATATCA+AGG | - | chr4.3:3772200-3772219 | None:intergenic | 25.0% |
| ! | ACGTTAAAATAAAATGTGAG+AGG | - | chr4.3:3774209-3774228 | None:intergenic | 25.0% |
| ! | ATGTATATACTTGCATCTTA+TGG | + | chr4.3:3773254-3773273 | MS.gene55865:intron | 25.0% |
| ! | TAAATGAATAATGAACCTCA+AGG | - | chr4.3:3772058-3772077 | None:intergenic | 25.0% |
| ! | TATGATAGTCTAATAGTTAG+AGG | + | chr4.3:3773558-3773577 | MS.gene55865:intron | 25.0% |
| ! | TGTATATACTTGCATCTTAT+GGG | + | chr4.3:3773255-3773274 | MS.gene55865:intron | 25.0% |
| ! | TTGAAATTGATGAATGCTTT+GGG | + | chr4.3:3773392-3773411 | MS.gene55865:intron | 25.0% |
| !! | ATTCTAAGTTTTCAACTTGA+AGG | + | chr4.3:3772997-3773016 | MS.gene55865:intron | 25.0% |
| !! | TTCTAAGTTTTCAACTTGAA+GGG | + | chr4.3:3772998-3773017 | MS.gene55865:intron | 25.0% |
| !! | TTTGAAATTGATGAATGCTT+TGG | + | chr4.3:3773391-3773410 | MS.gene55865:intron | 25.0% |
| !! | TTTTCATACACTGTCTATAA+CGG | - | chr4.3:3774403-3774422 | None:intergenic | 25.0% |
| !! | TTTTCTTAGAAAATGGATGT+AGG | + | chr4.3:3774174-3774193 | MS.gene55865:intron | 25.0% |
| !!! | AGATTGCTTTTCTTAGAAAA+TGG | + | chr4.3:3774167-3774186 | MS.gene55865:intron | 25.0% |
| !!! | ATTTTGGATGAAATTGATTC+GGG | + | chr4.3:3772807-3772826 | MS.gene55865:CDS | 25.0% |
| !!! | GCAGTGTTTTTCTTATTTAA+TGG | + | chr4.3:3772659-3772678 | MS.gene55865:intron | 25.0% |
| !!! | GCCATTGATTTCATTTAAAA+AGG | + | chr4.3:3774329-3774348 | MS.gene55865:intron | 25.0% |
| !!! | GTTCTGAATGTTTTGTTTAA+TGG | + | chr4.3:3773931-3773950 | MS.gene55865:intron | 25.0% |
| !!! | GTTTTTAACTTACCATAACA+TGG | - | chr4.3:3772956-3772975 | None:intergenic | 25.0% |
| AAAAGCAATCTTCTACCAAA+TGG | - | chr4.3:3774158-3774177 | None:intergenic | 30.0% | |
| AAAATAAGTCGATCCAATCA+AGG | - | chr4.3:3772230-3772249 | None:intergenic | 30.0% | |
| AAGCTATCTTGGATAACTTA+GGG | - | chr4.3:3772346-3772365 | None:intergenic | 30.0% | |
| AAGTGTGTGTTATGTAATAC+AGG | - | chr4.3:3773889-3773908 | None:intergenic | 30.0% | |
| AATGAATAATGAACCTCAAG+GGG | - | chr4.3:3772056-3772075 | None:intergenic | 30.0% | |
| ACATTTCTATTGAGAAAGTC+AGG | - | chr4.3:3772711-3772730 | None:intergenic | 30.0% | |
| AGAAAAGACCTACTTTCTTT+AGG | - | chr4.3:3773738-3773757 | None:intergenic | 30.0% | |
| AGAAAATGGATGTAGGTATT+AGG | + | chr4.3:3774181-3774200 | MS.gene55865:intron | 30.0% | |
| ATCATTGTTAAAGCCTTGAT+TGG | + | chr4.3:3772214-3772233 | MS.gene55865:intron | 30.0% | |
| CAAGTCAGAAACCATAAAAA+AGG | - | chr4.3:3772618-3772637 | None:intergenic | 30.0% | |
| CCAAAATATCAAGGATTATG+AGG | - | chr4.3:3772191-3772210 | None:intergenic | 30.0% | |
| CCAATACTATGAATTAACCA+CGG | - | chr4.3:3773862-3773881 | None:intergenic | 30.0% | |
| CTATTGTCTTCTCAACTATA+GGG | - | chr4.3:3773472-3773491 | None:intergenic | 30.0% | |
| CTTGATATTGTGGTAAAATG+TGG | + | chr4.3:3772096-3772115 | MS.gene55865:intron | 30.0% | |
| GAACTAAAATTGCAAGTTAG+TGG | - | chr4.3:3774306-3774325 | None:intergenic | 30.0% | |
| GCTATAACATTATCCTTTGA+GGG | - | chr4.3:3773782-3773801 | None:intergenic | 30.0% | |
| GTAGCTAGCAGAAAATATAT+GGG | - | chr4.3:3773990-3774009 | None:intergenic | 30.0% | |
| TAAGCTATCTTGGATAACTT+AGG | - | chr4.3:3772347-3772366 | None:intergenic | 30.0% | |
| TAATAGTTAGAGGTAGATCA+AGG | + | chr4.3:3773568-3773587 | MS.gene55865:intron | 30.0% | |
| TATCTAAATAGTTAGGCCAA+TGG | - | chr4.3:3773598-3773617 | None:intergenic | 30.0% | |
| TATTGTCTTCTCAACTATAG+GGG | - | chr4.3:3773471-3773490 | None:intergenic | 30.0% | |
| TCAATAGAAATGTCAACGAA+GGG | + | chr4.3:3772718-3772737 | MS.gene55865:CDS | 30.0% | |
| TCTATTGTCTTCTCAACTAT+AGG | - | chr4.3:3773473-3773492 | None:intergenic | 30.0% | |
| TGAGATGTATTCACATAATG+TGG | - | chr4.3:3774234-3774253 | None:intergenic | 30.0% | |
| TGCTATAACATTATCCTTTG+AGG | - | chr4.3:3773783-3773802 | None:intergenic | 30.0% | |
| TTCCATTTCCTAAAGAAAGT+AGG | + | chr4.3:3773727-3773746 | MS.gene55865:intron | 30.0% | |
| TTGTTATGGCTTATAATGCT+CGG | + | chr4.3:3772000-3772019 | MS.gene55865:CDS | 30.0% | |
| TTTAAATGAAATCAATGGCG+TGG | - | chr4.3:3774328-3774347 | None:intergenic | 30.0% | |
| TTTAAGAATAAAGGCAGCTT+TGG | + | chr4.3:3774025-3774044 | MS.gene55865:intron | 30.0% | |
| TTTCATACACTGTCTATAAC+GGG | - | chr4.3:3774402-3774421 | None:intergenic | 30.0% | |
| ! | AATTGATCATTTGAAACACC+AGG | - | chr4.3:3771978-3771997 | None:intergenic | 30.0% |
| ! | AATTTTATCACGACATCACT+TGG | - | chr4.3:3773373-3773392 | None:intergenic | 30.0% |
| ! | ATGAAGATTTTACAGCTTGT+TGG | + | chr4.3:3773220-3773239 | MS.gene55865:intron | 30.0% |
| ! | ATGATTTTCAATTTACTCCG+TGG | + | chr4.3:3773842-3773861 | MS.gene55865:intron | 30.0% |
| ! | CACATTTTACCACAATATCA+AGG | - | chr4.3:3772098-3772117 | None:intergenic | 30.0% |
| ! | CCTCATAATCCTTGATATTT+TGG | + | chr4.3:3772188-3772207 | MS.gene55865:intron | 30.0% |
| ! | TAAACAACGTATAGCTTGTA+TGG | + | chr4.3:3772405-3772424 | MS.gene55865:intron | 30.0% |
| !! | TGTTGATGATTACTCACTAT+CGG | + | chr4.3:3772898-3772917 | MS.gene55865:CDS | 30.0% |
| !!! | CCTTAAGTTTTGAGGAAAAT+GGG | + | chr4.3:3773077-3773096 | MS.gene55865:intron | 30.0% |
| !!! | CTTAAGTTTTGAGGAAAATG+GGG | + | chr4.3:3773078-3773097 | MS.gene55865:intron | 30.0% |
| !!! | GTTGTTTTGATAAGCTATCT+TGG | - | chr4.3:3772357-3772376 | None:intergenic | 30.0% |
| !!! | TCCTTAAGTTTTGAGGAAAA+TGG | + | chr4.3:3773076-3773095 | MS.gene55865:intron | 30.0% |
| AACTCATGAAAAGACCTTCA+AGG | - | chr4.3:3771935-3771954 | None:intergenic | 35.0% | |
| AACTTACCATAACATGGACA+TGG | - | chr4.3:3772950-3772969 | None:intergenic | 35.0% | |
| ACAAATGGAAAGTAGCTGAA+GGG | - | chr4.3:3773130-3773149 | None:intergenic | 35.0% | |
| ACAATAGAACACCGTTGTTT+AGG | + | chr4.3:3773485-3773504 | MS.gene55865:intron | 35.0% | |
| ACTCATGAAAAGACCTTCAA+GGG | - | chr4.3:3771934-3771953 | None:intergenic | 35.0% | |
| ACTTACCATAACATGGACAT+GGG | - | chr4.3:3772949-3772968 | None:intergenic | 35.0% | |
| ATAAAGGCCAGACATATACT+AGG | - | chr4.3:3773650-3773669 | None:intergenic | 35.0% | |
| ATCATCAACAGAGAATTCTC+TGG | - | chr4.3:3772888-3772907 | None:intergenic | 35.0% | |
| ATCTATGGTAGATGCAATTG+AGG | + | chr4.3:3774519-3774538 | MS.gene55865:CDS | 35.0% | |
| ATGCTCATTTATTGGCCATT+TGG | + | chr4.3:3774140-3774159 | MS.gene55865:intron | 35.0% | |
| ATTAAGCTGGTTATCCAGAT+AGG | + | chr4.3:3772501-3772520 | MS.gene55865:intron | 35.0% | |
| CAATTGCATCTACCATAGAT+AGG | - | chr4.3:3774519-3774538 | None:intergenic | 35.0% | |
| CCACTAGTAACTTCATAATC+TGG | - | chr4.3:3771858-3771877 | None:intergenic | 35.0% | |
| CCAGATTATGAAGTTACTAG+TGG | + | chr4.3:3771855-3771874 | MS.gene55865:CDS | 35.0% | |
| CCGTGGTTAATTCATAGTAT+TGG | + | chr4.3:3773859-3773878 | MS.gene55865:intron | 35.0% | |
| CGTAGCTAGCAGAAAATATA+TGG | - | chr4.3:3773991-3774010 | None:intergenic | 35.0% | |
| CGTTGTTATCCTTGATATTG+TGG | + | chr4.3:3772086-3772105 | MS.gene55865:intron | 35.0% | |
| CTCAATAGAAATGTCAACGA+AGG | + | chr4.3:3772717-3772736 | MS.gene55865:CDS | 35.0% | |
| CTTCTAAACTATCAGGACAA+CGG | + | chr4.3:3774472-3774491 | MS.gene55865:intron | 35.0% | |
| GCATAAGTACTTGATTAAGC+TGG | + | chr4.3:3772488-3772507 | MS.gene55865:intron | 35.0% | |
| GTATACAGACGATCTAATTC+AGG | - | chr4.3:3774115-3774134 | None:intergenic | 35.0% | |
| GTCTATCTCAAATCATGCTA+TGG | - | chr4.3:3774277-3774296 | None:intergenic | 35.0% | |
| GTTAATCTCACTATCAACAG+AGG | + | chr4.3:3771762-3771781 | MS.gene55865:CDS | 35.0% | |
| TATACTTGCATCTTATGGGA+AGG | + | chr4.3:3773259-3773278 | MS.gene55865:intron | 35.0% | |
| TCATCAACAGAGAATTCTCT+GGG | - | chr4.3:3772887-3772906 | None:intergenic | 35.0% | |
| TCCATTTGTGTGAATGTACT+CGG | + | chr4.3:3773141-3773160 | MS.gene55865:intron | 35.0% | |
| TCTCATAGATGCCTAAACAA+CGG | - | chr4.3:3773499-3773518 | None:intergenic | 35.0% | |
| TGGAAAAAGTCGCAAAATCA+AGG | - | chr4.3:3772579-3772598 | None:intergenic | 35.0% | |
| TTAAGCTGGTTATCCAGATA+GGG | + | chr4.3:3772502-3772521 | MS.gene55865:intron | 35.0% | |
| TTATGGACGTAAACATCTGT+GGG | + | chr4.3:3772257-3772276 | MS.gene55865:intron | 35.0% | |
| TTCATACACTGTCTATAACG+GGG | - | chr4.3:3774401-3774420 | None:intergenic | 35.0% | |
| TTTATGGACGTAAACATCTG+TGG | + | chr4.3:3772256-3772275 | MS.gene55865:intron | 35.0% | |
| TTTCCTCAAAACTTAAGGAG+AGG | - | chr4.3:3773075-3773094 | None:intergenic | 35.0% | |
| ! | AAACATCTGTGGGATTGTTT+TGG | + | chr4.3:3772267-3772286 | MS.gene55865:intron | 35.0% |
| ! | AGGGGAAAATTTGCTTGAAA+TGG | + | chr4.3:3771893-3771912 | MS.gene55865:CDS | 35.0% |
| ! | CCCATTTTCCTCAAAACTTA+AGG | - | chr4.3:3773080-3773099 | None:intergenic | 35.0% |
| ! | GACCTACTTTCTTTAGGAAA+TGG | - | chr4.3:3773732-3773751 | None:intergenic | 35.0% |
| ! | TAGTATATGTCTGGCCTTTA+TGG | + | chr4.3:3773649-3773668 | MS.gene55865:intron | 35.0% |
| ! | TTTCCTCTCCTTAAGTTTTG+AGG | + | chr4.3:3773069-3773088 | MS.gene55865:intron | 35.0% |
| !! | AATGTACTCGGTTTTAGCAA+AGG | + | chr4.3:3773153-3773172 | MS.gene55865:intron | 35.0% |
| !! | TAATGGTTTAGGTGCTGATT+TGG | + | chr4.3:3773948-3773967 | MS.gene55865:intron | 35.0% |
| !!! | AGTGGTAGTGTTGTTTTCAA+AGG | + | chr4.3:3771873-3771892 | MS.gene55865:CDS | 35.0% |
| !!! | GTGGTAGTGTTGTTTTCAAA+GGG | + | chr4.3:3771874-3771893 | MS.gene55865:CDS | 35.0% |
| !!! | TGGTAGTGTTGTTTTCAAAG+GGG | + | chr4.3:3771875-3771894 | MS.gene55865:CDS | 35.0% |
| AATGCTCGGAGAAAGAAACT+TGG | + | chr4.3:3772014-3772033 | MS.gene55865:CDS | 40.0% | |
| AATGTCAACGAAGGGTTTAG+TGG | + | chr4.3:3772726-3772745 | MS.gene55865:CDS | 40.0% | |
| ACCGAGTACATTCACACAAA+TGG | - | chr4.3:3773145-3773164 | None:intergenic | 40.0% | |
| ACTTCAGCTGATAATCCTCT+AGG | - | chr4.3:3773703-3773722 | None:intergenic | 40.0% | |
| ACTTTCGCTAAGGTTCTTGT+GGG | + | chr4.3:3771828-3771847 | MS.gene55865:CDS | 40.0% | |
| ATCATGGGAAAAAACGGTTC+TGG | + | chr4.3:3771798-3771817 | MS.gene55865:CDS | 40.0% | |
| ATCTGATCTTCTCTCCCTAT+CGG | - | chr4.3:3773537-3773556 | None:intergenic | 40.0% | |
| CACAAATGGAAAGTAGCTGA+AGG | - | chr4.3:3773131-3773150 | None:intergenic | 40.0% | |
| CACGCTATCATGGGAAAAAA+CGG | + | chr4.3:3771792-3771811 | MS.gene55865:CDS | 40.0% | |
| CATCAACAGAGAATTCTCTG+GGG | - | chr4.3:3772886-3772905 | None:intergenic | 40.0% | |
| CTCTGATCCTAGTATATGTC+TGG | + | chr4.3:3773640-3773659 | MS.gene55865:intron | 40.0% | |
| GGAGAAGAACGGAATTGAAA+TGG | - | chr4.3:3771621-3771640 | None:intergenic | 40.0% | |
| GGTAGATCAAGGAAAACCAT+TGG | + | chr4.3:3773579-3773598 | MS.gene55865:intron | 40.0% | |
| GTGGGTTCATCTACATTGAA+GGG | - | chr4.3:3773681-3773700 | None:intergenic | 40.0% | |
| GTTGTTTAGGCATCTATGAG+AGG | + | chr4.3:3773498-3773517 | MS.gene55865:intron | 40.0% | |
| TAAAAAAGGGCTACACACAG+TGG | - | chr4.3:3772604-3772623 | None:intergenic | 40.0% | |
| TCAGTCTCAGACTTTAAGTG+AGG | + | chr4.3:3773027-3773046 | MS.gene55865:intron | 40.0% | |
| ! | AAACTTGGTCTTCCTGAACT+TGG | + | chr4.3:3772029-3772048 | MS.gene55865:CDS | 40.0% |
| ! | AACATTATCCTTTGAGGGAC+TGG | - | chr4.3:3773777-3773796 | None:intergenic | 40.0% |
| ! | ACATTATCCTTTGAGGGACT+GGG | - | chr4.3:3773776-3773795 | None:intergenic | 40.0% |
| ! | ATCTTGCAGCTTGCAGTTTT+GGG | + | chr4.3:3772771-3772790 | MS.gene55865:CDS | 40.0% |
| ! | GGGTTCAGGTGCTTAATTTT+AGG | + | chr4.3:3773098-3773117 | MS.gene55865:intron | 40.0% |
| ! | TGTGTGATTTGGGAGAAGAA+CGG | - | chr4.3:3771632-3771651 | None:intergenic | 40.0% |
| !! | CTGATTTGGCAACTTTAGCA+GGG | + | chr4.3:3773962-3773981 | MS.gene55865:intron | 40.0% |
| !! | GGATGAAATTGATTCGGGAT+TGG | + | chr4.3:3772812-3772831 | MS.gene55865:CDS | 40.0% |
| !! | GGCATTGGATTCAACGATTT+TGG | - | chr4.3:3771727-3771746 | None:intergenic | 40.0% |
| !! | TGGTAAAAGCACTTTCGCTA+AGG | + | chr4.3:3771818-3771837 | MS.gene55865:CDS | 40.0% |
| !! | TTTTGAGGAAAATGGGGTTC+AGG | + | chr4.3:3773084-3773103 | MS.gene55865:intron | 40.0% |
| !!! | CTGTGTGTAGCCCTTTTTTA+TGG | + | chr4.3:3772604-3772623 | MS.gene55865:intron | 40.0% |
| !!! | GGATTGTTTTGGAGAGCTTT+TGG | + | chr4.3:3772278-3772297 | MS.gene55865:intron | 40.0% |
| AACGGAAGAATTGCAAGGAC+AGG | + | chr4.3:3774490-3774509 | MS.gene55865:CDS | 45.0% | |
| AACTGCATTTAGGCCCTATC+TGG | - | chr4.3:3772518-3772537 | None:intergenic | 45.0% | |
| ACCATAACATGGACATGGGA+GGG | - | chr4.3:3772945-3772964 | None:intergenic | 45.0% | |
| AGGACAACGGAAGAATTGCA+AGG | + | chr4.3:3774485-3774504 | MS.gene55865:intron | 45.0% | |
| AGGCGAAATTCACGCTATCA+TGG | + | chr4.3:3771782-3771801 | MS.gene55865:CDS | 45.0% | |
| ATGTAGATGAACCCACCTAG+AGG | + | chr4.3:3773685-3773704 | MS.gene55865:intron | 45.0% | |
| ATTAACGCCGCGGAGAATTT+CGG | - | chr4.3:3771748-3771767 | None:intergenic | 45.0% | |
| ATTGGATGTTGATGCGCTCA+GGG | + | chr4.3:3772830-3772849 | MS.gene55865:CDS | 45.0% | |
| CAATCACCTGTTGCAATTCC+TGG | + | chr4.3:3771957-3771976 | MS.gene55865:CDS | 45.0% | |
| CACGACATCACTTGGTACAA+TGG | - | chr4.3:3773365-3773384 | None:intergenic | 45.0% | |
| CACTTTCGCTAAGGTTCTTG+TGG | + | chr4.3:3771827-3771846 | MS.gene55865:CDS | 45.0% | |
| CAGCTGATAATCCTCTAGGT+GGG | - | chr4.3:3773699-3773718 | None:intergenic | 45.0% | |
| GAAACACCAGGAATTGCAAC+AGG | - | chr4.3:3771966-3771985 | None:intergenic | 45.0% | |
| GGCGAAATTCACGCTATCAT+GGG | + | chr4.3:3771783-3771802 | MS.gene55865:CDS | 45.0% | |
| GTAGATGCAATTGAGGCAGA+TGG | + | chr4.3:3774526-3774545 | MS.gene55865:CDS | 45.0% | |
| GTTCATCTACATTGAAGGGC+CGG | - | chr4.3:3773677-3773696 | None:intergenic | 45.0% | |
| TACCATAACATGGACATGGG+AGG | - | chr4.3:3772946-3772965 | None:intergenic | 45.0% | |
| TCAGCTGATAATCCTCTAGG+TGG | - | chr4.3:3773700-3773719 | None:intergenic | 45.0% | |
| TGAGGCAGATGGATATGAAC+TGG | + | chr4.3:3774537-3774556 | MS.gene55865:CDS | 45.0% | |
| TGCATGCCTGACTGCAATTA+AGG | - | chr4.3:3772548-3772567 | None:intergenic | 45.0% | |
| TTAGTTTCCCAGTCCCTCAA+AGG | + | chr4.3:3773766-3773785 | MS.gene55865:intron | 45.0% | |
| ! | GATCTTGCAGCTTGCAGTTT+TGG | + | chr4.3:3772770-3772789 | MS.gene55865:CDS | 45.0% |
| ! | GGTGGGTTCATCTACATTGA+AGG | - | chr4.3:3773682-3773701 | None:intergenic | 45.0% |
| ! | TCTTGCAGCTTGCAGTTTTG+GGG | + | chr4.3:3772772-3772791 | MS.gene55865:CDS | 45.0% |
| ! | TGATAGTGAGATTAACGCCG+CGG | - | chr4.3:3771758-3771777 | None:intergenic | 45.0% |
| !! | AAGATCGTTGACTTGGAGGA+GGG | - | chr4.3:3771700-3771719 | None:intergenic | 45.0% |
| !! | GCTGATTTGGCAACTTTAGC+AGG | + | chr4.3:3773961-3773980 | MS.gene55865:intron | 45.0% |
| !!! | TCATTTTATTTTATTTTTTA+TGG | - | chr4.3:3773444-3773463 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTAAGAATAA+AGG | + | chr4.3:3774016-3774035 | MS.gene55865:intron | 5.0% |
| AAGGACAGGCGACCTATCTA+TGG | + | chr4.3:3774504-3774523 | MS.gene55865:CDS | 50.0% | |
| AAGGGCTACACACAGTGGTT+TGG | - | chr4.3:3772599-3772618 | None:intergenic | 50.0% | |
| ACCCTCCCATGTCCATGTTA+TGG | + | chr4.3:3772941-3772960 | MS.gene55865:CDS | 50.0% | |
| AGGCCGCATCAACTGCATTT+AGG | - | chr4.3:3772528-3772547 | None:intergenic | 50.0% | |
| ATGCGGCCTTAATTGCAGTC+AGG | + | chr4.3:3772539-3772558 | MS.gene55865:intron | 50.0% | |
| CCTGAAGAAAGAGCCCTTGA+AGG | + | chr4.3:3771918-3771937 | MS.gene55865:CDS | 50.0% | |
| CCTTCAAGGGCTCTTTCTTC+AGG | - | chr4.3:3771921-3771940 | None:intergenic | 50.0% | |
| GATTGGATGTTGATGCGCTC+AGG | + | chr4.3:3772829-3772848 | MS.gene55865:CDS | 50.0% | |
| GGCATCTATGAGAGGACATG+TGG | + | chr4.3:3773506-3773525 | MS.gene55865:intron | 50.0% | |
| GTCAACGAAGGGTTTAGTGG+AGG | + | chr4.3:3772729-3772748 | MS.gene55865:CDS | 50.0% | |
| TCCAATGCCGAAATTCTCCG+CGG | + | chr4.3:3771738-3771757 | MS.gene55865:CDS | 50.0% | |
| TTGCGGCGAGTGTGTGATTT+GGG | - | chr4.3:3771642-3771661 | None:intergenic | 50.0% | |
| TTTGCGGCGAGTGTGTGATT+TGG | - | chr4.3:3771643-3771662 | None:intergenic | 50.0% | |
| ! | ATGTCTGGCCTTTATGGCAC+CGG | + | chr4.3:3773655-3773674 | MS.gene55865:intron | 50.0% |
| ! | CACTGTCTATAACGGGGATC+AGG | - | chr4.3:3774395-3774414 | None:intergenic | 50.0% |
| ! | GGGCCTAAATGCAGTTGATG+CGG | + | chr4.3:3772522-3772541 | MS.gene55865:intron | 50.0% |
| ! | GGGGGCAGATTTGGCTATTT+TGG | + | chr4.3:3772791-3772810 | MS.gene55865:CDS | 50.0% |
| ! | TGGCTCGAAGATCGTTGACT+TGG | - | chr4.3:3771707-3771726 | None:intergenic | 50.0% |
| !! | AGATCGTTGACTTGGAGGAG+GGG | - | chr4.3:3771699-3771718 | None:intergenic | 50.0% |
| !! | CTCGAAGATCGTTGACTTGG+AGG | - | chr4.3:3771704-3771723 | None:intergenic | 50.0% |
| !! | CTTGCAGCTTGCAGTTTTGG+GGG | + | chr4.3:3772773-3772792 | MS.gene55865:CDS | 50.0% |
| !! | GAAGATCGTTGACTTGGAGG+AGG | - | chr4.3:3771701-3771720 | None:intergenic | 50.0% |
| !! | GACATGTGGAAGCACCGATA+GGG | + | chr4.3:3773520-3773539 | MS.gene55865:intron | 50.0% |
| !!! | TGCAGTTTTGGGGGCAGATT+TGG | + | chr4.3:3772782-3772801 | MS.gene55865:CDS | 50.0% |
| ACCTCAAGGGGTCCAAGTTC+AGG | - | chr4.3:3772044-3772063 | None:intergenic | 55.0% | |
| CAAATTCGCCTGCTTTGCGG+CGG | + | chr4.3:3771659-3771678 | MS.gene55865:CDS | 55.0% | |
| CCGCAAAGCAGGCGAATTTG+CGG | - | chr4.3:3771659-3771678 | None:intergenic | 55.0% | |
| CCGCAAATTCGCCTGCTTTG+CGG | + | chr4.3:3771656-3771675 | MS.gene55865:CDS | 55.0% | |
| TCCTGAACTTGGACCCCTTG+AGG | + | chr4.3:3772040-3772059 | MS.gene55865:CDS | 55.0% | |
| TGTTGATGCGCTCAGGGATG+TGG | + | chr4.3:3772836-3772855 | MS.gene55865:CDS | 55.0% | |
| !! | GGACATGTGGAAGCACCGAT+AGG | + | chr4.3:3773519-3773538 | MS.gene55865:intron | 55.0% |
| !! | TTGAAGGGCCGGTGCCATAA+AGG | - | chr4.3:3773666-3773685 | None:intergenic | 55.0% |
| GACTTGGAGGAGGGGAACCT+CGG | - | chr4.3:3771691-3771710 | None:intergenic | 60.0% | |
| GCCGCGGAGAATTTCGGCAT+TGG | - | chr4.3:3771742-3771761 | None:intergenic | 60.0% | |
| GCTCAGGGATGTGGCAAGTG+CGG | + | chr4.3:3772845-3772864 | MS.gene55865:CDS | 60.0% | |
| GGTGCTCGCCGCCGCAAAGC+AGG | - | chr4.3:3771670-3771689 | None:intergenic | 75.0% | |
| ! | CTTTGCGGCGGCGAGCACCG+AGG | + | chr4.3:3771671-3771690 | MS.gene55865:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 3771594 | 3774576 | 3771594 | ID=MS.gene55865 |
| chr4.3 | mRNA | 3771594 | 3774576 | 3771594 | ID=MS.gene55865.t1;Parent=MS.gene55865 |
| chr4.3 | exon | 3771594 | 3772061 | 3771594 | ID=MS.gene55865.t1.exon1;Parent=MS.gene55865.t1 |
| chr4.3 | CDS | 3771594 | 3772061 | 3771594 | ID=cds.MS.gene55865.t1;Parent=MS.gene55865.t1 |
| chr4.3 | exon | 3772663 | 3772962 | 3772663 | ID=MS.gene55865.t1.exon2;Parent=MS.gene55865.t1 |
| chr4.3 | CDS | 3772663 | 3772962 | 3772663 | ID=cds.MS.gene55865.t1;Parent=MS.gene55865.t1 |
| chr4.3 | exon | 3774487 | 3774576 | 3774487 | ID=MS.gene55865.t1.exon3;Parent=MS.gene55865.t1 |
| chr4.3 | CDS | 3774487 | 3774576 | 3774487 | ID=cds.MS.gene55865.t1;Parent=MS.gene55865.t1 |
| Gene Sequence |
| Protein sequence |
