Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20177.t1 | XP_003630614.1 | 97.2 | 285 | 8 | 0 | 1 | 285 | 1 | 285 | 1.90E-149 | 538.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20177.t1 | Q9CAF5 | 71.9 | 249 | 70 | 0 | 34 | 282 | 89 | 337 | 3.3e-102 | 372.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20177.t1 | G7LIW2 | 97.2 | 285 | 8 | 0 | 1 | 285 | 1 | 285 | 1.4e-149 | 538.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene20177 | 0.830212 | 3.34E-55 | -1.69E-46 |
| MS.gene049171 | MS.gene20177 | 0.86019 | 2.45E-63 | -1.69E-46 |
| MS.gene049173 | MS.gene20177 | 0.852747 | 3.77E-61 | -1.69E-46 |
| MS.gene049217 | MS.gene20177 | 0.858736 | 6.71E-63 | -1.69E-46 |
| MS.gene049222 | MS.gene20177 | 0.862431 | 5.09E-64 | -1.69E-46 |
| MS.gene049232 | MS.gene20177 | 0.810097 | 1.37E-50 | -1.69E-46 |
| MS.gene049285 | MS.gene20177 | 0.878802 | 2.09E-69 | -1.69E-46 |
| MS.gene049320 | MS.gene20177 | 0.836724 | 7.91E-57 | -1.69E-46 |
| MS.gene049369 | MS.gene20177 | 0.823652 | 1.23E-53 | -1.69E-46 |
| MS.gene049427 | MS.gene20177 | 0.886444 | 3.40E-72 | -1.69E-46 |
| MS.gene049609 | MS.gene20177 | 0.848391 | 6.31E-60 | -1.69E-46 |
| MS.gene049614 | MS.gene20177 | 0.840034 | 1.11E-57 | -1.69E-46 |
| MS.gene049627 | MS.gene20177 | 0.834952 | 2.23E-56 | -1.69E-46 |
| MS.gene049633 | MS.gene20177 | 0.849438 | 3.23E-60 | -1.69E-46 |
| MS.gene049805 | MS.gene20177 | 0.879963 | 8.11E-70 | -1.69E-46 |
| MS.gene05010 | MS.gene20177 | 0.804446 | 2.15E-49 | -1.69E-46 |
| MS.gene050163 | MS.gene20177 | 0.85446 | 1.21E-61 | -1.69E-46 |
| MS.gene050165 | MS.gene20177 | 0.84229 | 2.83E-58 | -1.69E-46 |
| MS.gene050323 | MS.gene20177 | 0.804073 | 2.57E-49 | -1.69E-46 |
| MS.gene050333 | MS.gene20177 | 0.888991 | 3.61E-73 | -1.69E-46 |
| MS.gene050432 | MS.gene20177 | 0.812069 | 5.10E-51 | -1.69E-46 |
| MS.gene050444 | MS.gene20177 | 0.805872 | 1.08E-49 | -1.69E-46 |
| MS.gene050504 | MS.gene20177 | 0.840912 | 6.53E-58 | -1.69E-46 |
| MS.gene050518 | MS.gene20177 | 0.841421 | 4.80E-58 | -1.69E-46 |
| MS.gene050520 | MS.gene20177 | 0.803635 | 3.17E-49 | -1.69E-46 |
| MS.gene050538 | MS.gene20177 | 0.804407 | 2.19E-49 | -1.69E-46 |
| MS.gene050593 | MS.gene20177 | 0.858636 | 7.19E-63 | -1.69E-46 |
| MS.gene050612 | MS.gene20177 | 0.844444 | 7.53E-59 | -1.69E-46 |
| MS.gene050675 | MS.gene20177 | 0.810007 | 1.43E-50 | -1.69E-46 |
| MS.gene050699 | MS.gene20177 | 0.814088 | 1.84E-51 | -1.69E-46 |
| MS.gene050747 | MS.gene20177 | 0.870836 | 1.08E-66 | -1.69E-46 |
| MS.gene050767 | MS.gene20177 | 0.847417 | 1.17E-59 | -1.69E-46 |
| MS.gene050770 | MS.gene20177 | 0.850561 | 1.57E-60 | -1.69E-46 |
| MS.gene050772 | MS.gene20177 | 0.886322 | 3.78E-72 | -1.69E-46 |
| MS.gene05080 | MS.gene20177 | 0.826716 | 2.33E-54 | -1.69E-46 |
| MS.gene050812 | MS.gene20177 | 0.832827 | 7.57E-56 | -1.69E-46 |
| MS.gene05081 | MS.gene20177 | 0.816221 | 6.18E-52 | -1.69E-46 |
| MS.gene050868 | MS.gene20177 | 0.81768 | 2.91E-52 | -1.69E-46 |
| MS.gene050871 | MS.gene20177 | 0.81485 | 1.25E-51 | -1.69E-46 |
| MS.gene050950 | MS.gene20177 | 0.870786 | 1.12E-66 | -1.69E-46 |
| MS.gene050986 | MS.gene20177 | 0.815079 | 1.11E-51 | -1.69E-46 |
| MS.gene05100 | MS.gene20177 | 0.814634 | 1.39E-51 | -1.69E-46 |
| MS.gene05105 | MS.gene20177 | 0.811144 | 8.11E-51 | -1.69E-46 |
| MS.gene051228 | MS.gene20177 | 0.852724 | 3.83E-61 | -1.69E-46 |
| MS.gene051387 | MS.gene20177 | 0.85752 | 1.54E-62 | -1.69E-46 |
| MS.gene051434 | MS.gene20177 | 0.825082 | 5.69E-54 | -1.69E-46 |
| MS.gene051666 | MS.gene20177 | 0.858319 | 8.94E-63 | -1.69E-46 |
| MS.gene051692 | MS.gene20177 | 0.837871 | 4.03E-57 | -1.69E-46 |
| MS.gene051694 | MS.gene20177 | 0.858291 | 9.11E-63 | -1.69E-46 |
| MS.gene051734 | MS.gene20177 | 0.808373 | 3.20E-50 | -1.69E-46 |
| MS.gene051810 | MS.gene20177 | 0.838567 | 2.66E-57 | -1.69E-46 |
| MS.gene051838 | MS.gene20177 | 0.804492 | 2.10E-49 | -1.69E-46 |
| MS.gene051858 | MS.gene20177 | 0.866236 | 3.31E-65 | -1.69E-46 |
| MS.gene051874 | MS.gene20177 | 0.800433 | 1.44E-48 | -1.69E-46 |
| MS.gene051949 | MS.gene20177 | 0.800536 | 1.38E-48 | -1.69E-46 |
| MS.gene052164 | MS.gene20177 | 0.802489 | 5.47E-49 | -1.69E-46 |
| MS.gene052271 | MS.gene20177 | 0.869168 | 3.79E-66 | -1.69E-46 |
| MS.gene052310 | MS.gene20177 | 0.828999 | 6.58E-55 | -1.69E-46 |
| MS.gene052322 | MS.gene20177 | 0.81571 | 8.04E-52 | -1.69E-46 |
| MS.gene052379 | MS.gene20177 | 0.862619 | 4.46E-64 | -1.69E-46 |
| MS.gene052421 | MS.gene20177 | 0.839287 | 1.73E-57 | -1.69E-46 |
| MS.gene052481 | MS.gene20177 | 0.834373 | 3.11E-56 | -1.69E-46 |
| MS.gene052484 | MS.gene20177 | 0.857416 | 1.66E-62 | -1.69E-46 |
| MS.gene052485 | MS.gene20177 | 0.830463 | 2.89E-55 | -1.69E-46 |
| MS.gene052486 | MS.gene20177 | 0.804063 | 2.59E-49 | -1.69E-46 |
| MS.gene052506 | MS.gene20177 | 0.811234 | 7.75E-51 | -1.69E-46 |
| MS.gene052615 | MS.gene20177 | 0.855662 | 5.43E-62 | -1.69E-46 |
| MS.gene052670 | MS.gene20177 | 0.802865 | 4.58E-49 | -1.69E-46 |
| MS.gene052822 | MS.gene20177 | 0.820208 | 7.74E-53 | -1.69E-46 |
| MS.gene052870 | MS.gene20177 | 0.862458 | 5.00E-64 | -1.69E-46 |
| MS.gene052872 | MS.gene20177 | 0.86492 | 8.59E-65 | -1.69E-46 |
| MS.gene052916 | MS.gene20177 | 0.837281 | 5.70E-57 | -1.69E-46 |
| MS.gene052966 | MS.gene20177 | 0.850482 | 1.65E-60 | -1.69E-46 |
| MS.gene053009 | MS.gene20177 | 0.816759 | 4.69E-52 | -1.69E-46 |
| MS.gene053103 | MS.gene20177 | 0.836442 | 9.34E-57 | -1.69E-46 |
| MS.gene053104 | MS.gene20177 | 0.842141 | 3.10E-58 | -1.69E-46 |
| MS.gene053107 | MS.gene20177 | 0.833303 | 5.76E-56 | -1.69E-46 |
| MS.gene053203 | MS.gene20177 | 0.832112 | 1.14E-55 | -1.69E-46 |
| MS.gene053207 | MS.gene20177 | 0.868294 | 7.27E-66 | -1.69E-46 |
| MS.gene053213 | MS.gene20177 | 0.867643 | 1.18E-65 | -1.69E-46 |
| MS.gene053284 | MS.gene20177 | 0.801816 | 7.53E-49 | -1.69E-46 |
| MS.gene053285 | MS.gene20177 | 0.806064 | 9.86E-50 | -1.69E-46 |
| MS.gene053286 | MS.gene20177 | 0.86149 | 9.89E-64 | -1.69E-46 |
| MS.gene053322 | MS.gene20177 | 0.880668 | 4.54E-70 | -1.69E-46 |
| MS.gene053384 | MS.gene20177 | 0.826989 | 2.00E-54 | -1.69E-46 |
| MS.gene053449 | MS.gene20177 | 0.823903 | 1.08E-53 | -1.69E-46 |
| MS.gene053479 | MS.gene20177 | 0.810712 | 1.01E-50 | -1.69E-46 |
| MS.gene053574 | MS.gene20177 | 0.847713 | 9.72E-60 | -1.69E-46 |
| MS.gene053579 | MS.gene20177 | 0.805633 | 1.21E-49 | -1.69E-46 |
| MS.gene053632 | MS.gene20177 | 0.824606 | 7.37E-54 | -1.69E-46 |
| MS.gene053813 | MS.gene20177 | 0.816608 | 5.07E-52 | -1.69E-46 |
| MS.gene053824 | MS.gene20177 | 0.853098 | 2.99E-61 | -1.69E-46 |
| MS.gene053916 | MS.gene20177 | 0.823465 | 1.36E-53 | -1.69E-46 |
| MS.gene054376 | MS.gene20177 | 0.818661 | 1.74E-52 | -1.69E-46 |
| MS.gene054408 | MS.gene20177 | 0.870431 | 1.47E-66 | -1.69E-46 |
| MS.gene054595 | MS.gene20177 | 0.83978 | 1.29E-57 | -1.69E-46 |
| MS.gene054600 | MS.gene20177 | 0.865518 | 5.57E-65 | -1.69E-46 |
| MS.gene054642 | MS.gene20177 | 0.874112 | 8.71E-68 | -1.69E-46 |
| MS.gene054802 | MS.gene20177 | 0.830535 | 2.78E-55 | -1.69E-46 |
| MS.gene054803 | MS.gene20177 | 0.829172 | 5.97E-55 | -1.69E-46 |
| MS.gene054804 | MS.gene20177 | 0.829721 | 4.39E-55 | -1.69E-46 |
| MS.gene054927 | MS.gene20177 | 0.813308 | 2.73E-51 | -1.69E-46 |
| MS.gene054954 | MS.gene20177 | 0.829713 | 4.41E-55 | -1.69E-46 |
| MS.gene05505 | MS.gene20177 | 0.841691 | 4.08E-58 | -1.69E-46 |
| MS.gene055206 | MS.gene20177 | 0.857605 | 1.46E-62 | -1.69E-46 |
| MS.gene055212 | MS.gene20177 | 0.800228 | 1.59E-48 | -1.69E-46 |
| MS.gene055224 | MS.gene20177 | 0.858286 | 9.14E-63 | -1.69E-46 |
| MS.gene055289 | MS.gene20177 | 0.810269 | 1.25E-50 | -1.69E-46 |
| MS.gene055362 | MS.gene20177 | 0.841256 | 5.31E-58 | -1.69E-46 |
| MS.gene055397 | MS.gene20177 | 0.82931 | 5.53E-55 | -1.69E-46 |
| MS.gene055412 | MS.gene20177 | 0.869608 | 2.72E-66 | -1.69E-46 |
| MS.gene055499 | MS.gene20177 | 0.830187 | 3.38E-55 | -1.69E-46 |
| MS.gene055502 | MS.gene20177 | 0.864987 | 8.19E-65 | -1.69E-46 |
| MS.gene055577 | MS.gene20177 | 0.842272 | 2.86E-58 | -1.69E-46 |
| MS.gene055605 | MS.gene20177 | 0.806996 | 6.27E-50 | -1.69E-46 |
| MS.gene055636 | MS.gene20177 | 0.891457 | 3.90E-74 | -1.69E-46 |
| MS.gene055638 | MS.gene20177 | 0.877682 | 5.17E-69 | -1.69E-46 |
| MS.gene055647 | MS.gene20177 | 0.883528 | 4.16E-71 | -1.69E-46 |
| MS.gene055722 | MS.gene20177 | 0.882505 | 9.85E-71 | -1.69E-46 |
| MS.gene055748 | MS.gene20177 | 0.820847 | 5.52E-53 | -1.69E-46 |
| MS.gene055750 | MS.gene20177 | 0.822138 | 2.78E-53 | -1.69E-46 |
| MS.gene055751 | MS.gene20177 | 0.816419 | 5.58E-52 | -1.69E-46 |
| MS.gene05592 | MS.gene20177 | 0.854882 | 9.15E-62 | -1.69E-46 |
| MS.gene055930 | MS.gene20177 | 0.801365 | 9.32E-49 | -1.69E-46 |
| MS.gene055941 | MS.gene20177 | 0.857617 | 1.44E-62 | -1.69E-46 |
| MS.gene056083 | MS.gene20177 | 0.826123 | 3.22E-54 | -1.69E-46 |
| MS.gene056166 | MS.gene20177 | 0.803482 | 3.41E-49 | -1.69E-46 |
| MS.gene056374 | MS.gene20177 | 0.864875 | 8.88E-65 | -1.69E-46 |
| MS.gene056409 | MS.gene20177 | 0.819507 | 1.12E-52 | -1.69E-46 |
| MS.gene056410 | MS.gene20177 | 0.822337 | 2.50E-53 | -1.69E-46 |
| MS.gene056422 | MS.gene20177 | 0.803281 | 3.76E-49 | -1.69E-46 |
| MS.gene056449 | MS.gene20177 | 0.820212 | 7.73E-53 | -1.69E-46 |
| MS.gene056504 | MS.gene20177 | 0.812175 | 4.84E-51 | -1.69E-46 |
| MS.gene056510 | MS.gene20177 | 0.844984 | 5.39E-59 | -1.69E-46 |
| MS.gene056511 | MS.gene20177 | 0.806738 | 7.11E-50 | -1.69E-46 |
| MS.gene056549 | MS.gene20177 | 0.883245 | 5.28E-71 | -1.69E-46 |
| MS.gene056609 | MS.gene20177 | 0.800639 | 1.31E-48 | -1.69E-46 |
| MS.gene056610 | MS.gene20177 | 0.814297 | 1.66E-51 | -1.69E-46 |
| MS.gene056657 | MS.gene20177 | 0.85006 | 2.17E-60 | -1.69E-46 |
| MS.gene056692 | MS.gene20177 | 0.83783 | 4.12E-57 | -1.69E-46 |
| MS.gene056897 | MS.gene20177 | 0.887926 | 9.29E-73 | -1.69E-46 |
| MS.gene056898 | MS.gene20177 | 0.810371 | 1.19E-50 | -1.69E-46 |
| MS.gene056946 | MS.gene20177 | 0.806969 | 6.35E-50 | -1.69E-46 |
| MS.gene057011 | MS.gene20177 | 0.894957 | 1.51E-75 | -1.69E-46 |
| MS.gene057076 | MS.gene20177 | 0.820133 | 8.06E-53 | -1.69E-46 |
| MS.gene057129 | MS.gene20177 | 0.869727 | 2.49E-66 | -1.69E-46 |
| MS.gene057146 | MS.gene20177 | 0.8569 | 2.35E-62 | -1.69E-46 |
| MS.gene057285 | MS.gene20177 | 0.846487 | 2.11E-59 | -1.69E-46 |
| MS.gene057331 | MS.gene20177 | 0.871332 | 7.41E-67 | -1.69E-46 |
| MS.gene057416 | MS.gene20177 | 0.887157 | 1.83E-72 | -1.69E-46 |
| MS.gene057831 | MS.gene20177 | 0.818787 | 1.63E-52 | -1.69E-46 |
| MS.gene057856 | MS.gene20177 | 0.817721 | 2.85E-52 | -1.69E-46 |
| MS.gene057926 | MS.gene20177 | 0.817039 | 4.06E-52 | -1.69E-46 |
| MS.gene058006 | MS.gene20177 | 0.819417 | 1.17E-52 | -1.69E-46 |
| MS.gene058019 | MS.gene20177 | 0.839985 | 1.14E-57 | -1.69E-46 |
| MS.gene058130 | MS.gene20177 | 0.806882 | 6.63E-50 | -1.69E-46 |
| MS.gene058293 | MS.gene20177 | 0.832211 | 1.08E-55 | -1.69E-46 |
| MS.gene058323 | MS.gene20177 | 0.86395 | 1.73E-64 | -1.69E-46 |
| MS.gene058338 | MS.gene20177 | 0.824002 | 1.02E-53 | -1.69E-46 |
| MS.gene05837 | MS.gene20177 | 0.850205 | 1.97E-60 | -1.69E-46 |
| MS.gene058419 | MS.gene20177 | 0.86581 | 4.51E-65 | -1.69E-46 |
| MS.gene058544 | MS.gene20177 | 0.839319 | 1.70E-57 | -1.69E-46 |
| MS.gene058660 | MS.gene20177 | 0.814952 | 1.19E-51 | -1.69E-46 |
| MS.gene058700 | MS.gene20177 | 0.805419 | 1.35E-49 | -1.69E-46 |
| MS.gene058773 | MS.gene20177 | 0.868721 | 5.29E-66 | -1.69E-46 |
| MS.gene058838 | MS.gene20177 | 0.836583 | 8.60E-57 | -1.69E-46 |
| MS.gene05883 | MS.gene20177 | 0.83451 | 2.88E-56 | -1.69E-46 |
| MS.gene059022 | MS.gene20177 | 0.840611 | 7.84E-58 | -1.69E-46 |
| MS.gene059023 | MS.gene20177 | 0.85868 | 6.98E-63 | -1.69E-46 |
| MS.gene059029 | MS.gene20177 | 0.847889 | 8.69E-60 | -1.69E-46 |
| MS.gene059079 | MS.gene20177 | 0.826133 | 3.21E-54 | -1.69E-46 |
| MS.gene059305 | MS.gene20177 | 0.840956 | 6.36E-58 | -1.69E-46 |
| MS.gene05934 | MS.gene20177 | 0.841396 | 4.88E-58 | -1.69E-46 |
| MS.gene059536 | MS.gene20177 | 0.881854 | 1.70E-70 | -1.69E-46 |
| MS.gene05959 | MS.gene20177 | 0.801047 | 1.08E-48 | -1.69E-46 |
| MS.gene059676 | MS.gene20177 | 0.843718 | 1.18E-58 | -1.69E-46 |
| MS.gene059677 | MS.gene20177 | 0.840359 | 9.12E-58 | -1.69E-46 |
| MS.gene059688 | MS.gene20177 | 0.813982 | 1.94E-51 | -1.69E-46 |
| MS.gene059692 | MS.gene20177 | 0.801101 | 1.06E-48 | -1.69E-46 |
| MS.gene059695 | MS.gene20177 | 0.800794 | 1.22E-48 | -1.69E-46 |
| MS.gene059711 | MS.gene20177 | 0.817147 | 3.83E-52 | -1.69E-46 |
| MS.gene059718 | MS.gene20177 | 0.859883 | 3.04E-63 | -1.69E-46 |
| MS.gene059756 | MS.gene20177 | 0.827715 | 1.34E-54 | -1.69E-46 |
| MS.gene059801 | MS.gene20177 | 0.854256 | 1.39E-61 | -1.69E-46 |
| MS.gene059865 | MS.gene20177 | 0.812977 | 3.23E-51 | -1.69E-46 |
| MS.gene059902 | MS.gene20177 | 0.860554 | 1.90E-63 | -1.69E-46 |
| MS.gene059960 | MS.gene20177 | 0.89193 | 2.53E-74 | -1.69E-46 |
| MS.gene060193 | MS.gene20177 | 0.862548 | 4.69E-64 | -1.69E-46 |
| MS.gene060482 | MS.gene20177 | 0.804344 | 2.26E-49 | -1.69E-46 |
| MS.gene060703 | MS.gene20177 | 0.804246 | 2.37E-49 | -1.69E-46 |
| MS.gene060727 | MS.gene20177 | 0.80731 | 5.38E-50 | -1.69E-46 |
| MS.gene060762 | MS.gene20177 | 0.864899 | 8.72E-65 | -1.69E-46 |
| MS.gene06077 | MS.gene20177 | 0.831483 | 1.63E-55 | -1.69E-46 |
| MS.gene060804 | MS.gene20177 | 0.834638 | 2.67E-56 | -1.69E-46 |
| MS.gene060818 | MS.gene20177 | 0.88677 | 2.56E-72 | -1.69E-46 |
| MS.gene060835 | MS.gene20177 | 0.816825 | 4.53E-52 | -1.69E-46 |
| MS.gene060837 | MS.gene20177 | 0.851986 | 6.21E-61 | -1.69E-46 |
| MS.gene06092 | MS.gene20177 | 0.876812 | 1.04E-68 | -1.69E-46 |
| MS.gene060982 | MS.gene20177 | 0.817578 | 3.07E-52 | -1.69E-46 |
| MS.gene061041 | MS.gene20177 | 0.820415 | 6.94E-53 | -1.69E-46 |
| MS.gene061134 | MS.gene20177 | 0.833236 | 5.99E-56 | -1.69E-46 |
| MS.gene061150 | MS.gene20177 | 0.89234 | 1.74E-74 | -1.69E-46 |
| MS.gene061171 | MS.gene20177 | 0.845531 | 3.83E-59 | -1.69E-46 |
| MS.gene061200 | MS.gene20177 | 0.894843 | 1.68E-75 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene013566 | MS.gene20177 | PPI |
| MS.gene06894 | MS.gene20177 | PPI |
| MS.gene06683 | MS.gene20177 | PPI |
| MS.gene057128 | MS.gene20177 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20177.t1 | MTR_8g101390 | 97.193 | 285 | 8 | 0 | 1 | 285 | 1 | 285 | 0.0 | 562 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20177.t1 | AT3G10670 | 71.888 | 249 | 70 | 0 | 34 | 282 | 89 | 337 | 3.40e-133 | 380 |
| MS.gene20177.t1 | AT5G06530 | 30.275 | 218 | 131 | 6 | 27 | 230 | 147 | 357 | 2.11e-12 | 67.8 |
| MS.gene20177.t1 | AT5G06530 | 29.817 | 218 | 132 | 6 | 27 | 230 | 147 | 357 | 2.29e-12 | 67.4 |
| MS.gene20177.t1 | AT5G06530 | 29.817 | 218 | 132 | 6 | 27 | 230 | 147 | 357 | 2.29e-12 | 67.4 |
| MS.gene20177.t1 | AT4G33460 | 28.571 | 231 | 128 | 11 | 53 | 275 | 59 | 260 | 4.90e-12 | 65.1 |
Find 70 sgRNAs with CRISPR-Local
Find 221 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATCTTGCAGCTTGCAGTTT+TGG | 0.164666 | 4.4:+4039696 | MS.gene20177:CDS |
| GGCATTGGATTCAACGATTT+TGG | 0.194740 | 4.4:-4038633 | None:intergenic |
| CAATCACCTGTTGCAATTCC+TGG | 0.224835 | 4.4:+4038866 | MS.gene20177:CDS |
| CCTTCAAGTGCTCTTTCTTC+AGG | 0.255369 | 4.4:-4038827 | None:intergenic |
| AAATGATCAATTTCTTGTTA+TGG | 0.315799 | 4.4:+4038895 | MS.gene20177:CDS |
| ACCTCAAGGGGTCCAAGTTC+AGG | 0.361866 | 4.4:-4038950 | None:intergenic |
| TTGCGGCGAGTGTGTGATTT+GGG | 0.362619 | 4.4:-4038548 | None:intergenic |
| ATTAACGCCGCGGAGAATTT+CGG | 0.363663 | 4.4:-4038654 | None:intergenic |
| CCGCAAATTCGCCTGCTTTG+CGG | 0.385979 | 4.4:+4038565 | MS.gene20177:CDS |
| GGAGAAGAACGGAATTGAAA+TGG | 0.406711 | 4.4:-4038527 | None:intergenic |
| TTTGCGGCGAGTGTGTGATT+TGG | 0.406874 | 4.4:-4038549 | None:intergenic |
| GATTGGATGTTGATGCGCTC+AGG | 0.409831 | 4.4:+4039755 | MS.gene20177:CDS |
| CCACTAGTAACTTCATAATC+TGG | 0.412502 | 4.4:-4038764 | None:intergenic |
| CTCGAAGATCGTTGACTTGG+AGG | 0.414656 | 4.4:-4038610 | None:intergenic |
| CACTTTCGCTAAGGTTCTTG+TGG | 0.423769 | 4.4:+4038736 | MS.gene20177:CDS |
| CCGCAAAGCAGGCGAATTTG+CGG | 0.425082 | 4.4:-4038565 | None:intergenic |
| AAACTTGGTCTTCCTGAACT+TGG | 0.426220 | 4.4:+4038938 | MS.gene20177:CDS |
| GGTGCTCGCCGCCGCAAAGC+AGG | 0.429445 | 4.4:-4038576 | None:intergenic |
| ACCCTCCCATGTCCATGTTA+TGG | 0.431294 | 4.4:+4039867 | MS.gene20177:CDS |
| ACATTTCTATTGAGAAAGTC+AGG | 0.433555 | 4.4:-4039634 | None:intergenic |
| AGGCGAAATTCACGCTATCA+TGG | 0.454010 | 4.4:+4038691 | MS.gene20177:CDS |
| AATGTCAACGAAGGGTTTAG+TGG | 0.459977 | 4.4:+4039652 | MS.gene20177:CDS |
| AAGGACAGGCGACCTATCTA+TGG | 0.465705 | 4.4:+4041443 | MS.gene20177:CDS |
| GAAACACCAGGAATTGCAAC+AGG | 0.465860 | 4.4:-4038872 | None:intergenic |
| ATCATCAACAGAGAATTCTC+TGG | 0.472195 | 4.4:-4039811 | None:intergenic |
| ACTTTCGCTAAGGTTCTTGT+GGG | 0.475186 | 4.4:+4038737 | MS.gene20177:CDS |
| GGATGAAATTGATTCGGGAT+TGG | 0.478013 | 4.4:+4039738 | MS.gene20177:CDS |
| CCTGAAGAAAGAGCACTTGA+AGG | 0.485744 | 4.4:+4038827 | MS.gene20177:CDS |
| TGAGGCAGATGGATATGAAC+TGG | 0.490578 | 4.4:+4041476 | MS.gene20177:CDS |
| TTGTTATGGCTTATAATGCT+CGG | 0.498223 | 4.4:+4038909 | MS.gene20177:CDS |
| GCCGCGGAGAATTTCGGCAT+TGG | 0.498807 | 4.4:-4038648 | None:intergenic |
| TCCTGAACTTGGACCCCTTG+AGG | 0.506534 | 4.4:+4038949 | MS.gene20177:CDS |
| TGGCTCGAAGATCGTTGACT+TGG | 0.513953 | 4.4:-4038613 | None:intergenic |
| CAAATTCGCCTGCTTTGCGG+CGG | 0.518445 | 4.4:+4038568 | MS.gene20177:CDS |
| TGTTGATGCGCTCAGGGATG+TGG | 0.524984 | 4.4:+4039762 | MS.gene20177:CDS |
| TGGTAAAAGCACTTTCGCTA+AGG | 0.531262 | 4.4:+4038727 | MS.gene20177:CDS |
| CTCAATAGAAATGTCAACGA+AGG | 0.535504 | 4.4:+4039643 | MS.gene20177:CDS |
| TCATCAACAGAGAATTCTCT+GGG | 0.539796 | 4.4:-4039810 | None:intergenic |
| CAATTGCATCTACCATAGAT+AGG | 0.540712 | 4.4:-4041455 | None:intergenic |
| AACGGAAGAATTGCAAGGAC+AGG | 0.551372 | 4.4:+4041429 | MS.gene20177:CDS |
| ATCTATGGTAGATGCAATTG+AGG | 0.552780 | 4.4:+4041458 | MS.gene20177:CDS |
| GACTTGGAGGAGGGGAACCT+CGG | 0.553003 | 4.4:-4038597 | None:intergenic |
| AAATGAATAATGAACCTCAA+GGG | 0.553158 | 4.4:-4038963 | None:intergenic |
| TCAATAGAAATGTCAACGAA+GGG | 0.553262 | 4.4:+4039644 | MS.gene20177:CDS |
| TGTTGATGATTACTCACTAT+CGG | 0.557313 | 4.4:+4039824 | MS.gene20177:CDS |
| GAAGATCGTTGACTTGGAGG+AGG | 0.561738 | 4.4:-4038607 | None:intergenic |
| GGCGAAATTCACGCTATCAT+GGG | 0.562057 | 4.4:+4038692 | MS.gene20177:CDS |
| AATTGATCATTTGAAACACC+AGG | 0.564779 | 4.4:-4038884 | None:intergenic |
| GTAGATGCAATTGAGGCAGA+TGG | 0.567240 | 4.4:+4041465 | MS.gene20177:CDS |
| AACTTACCATAACATGGACA+TGG | 0.572749 | 4.4:-4039873 | None:intergenic |
| AAGATCGTTGACTTGGAGGA+GGG | 0.579227 | 4.4:-4038606 | None:intergenic |
| ATTGGATGTTGATGCGCTCA+GGG | 0.588735 | 4.4:+4039756 | MS.gene20177:CDS |
| ACCATAACATGGACATGGGA+GGG | 0.592038 | 4.4:-4039868 | None:intergenic |
| CTTTGCGGCGGCGAGCACCG+AGG | 0.592980 | 4.4:+4038580 | MS.gene20177:CDS |
| AATGCTCGGAGAAAGAAACT+TGG | 0.594310 | 4.4:+4038923 | MS.gene20177:CDS |
| TAGTAACTTCATAATCTGGA+TGG | 0.601861 | 4.4:-4038760 | None:intergenic |
| AGATCGTTGACTTGGAGGAG+GGG | 0.602773 | 4.4:-4038605 | None:intergenic |
| AATGAATAATGAACCTCAAG+GGG | 0.611116 | 4.4:-4038962 | None:intergenic |
| CCAGATTATGAAGTTACTAG+TGG | 0.621960 | 4.4:+4038764 | MS.gene20177:CDS |
| TACCATAACATGGACATGGG+AGG | 0.624925 | 4.4:-4039869 | None:intergenic |
| CTTCTAAACTATCAGGACAA+CGG | 0.631876 | 4.4:+4041411 | MS.gene20177:intron |
| ACTTACCATAACATGGACAT+GGG | 0.633255 | 4.4:-4039872 | None:intergenic |
| GCTCAGGGATGTGGCAAGTG+CGG | 0.643242 | 4.4:+4039771 | MS.gene20177:CDS |
| GTCAACGAAGGGTTTAGTGG+AGG | 0.664376 | 4.4:+4039655 | MS.gene20177:CDS |
| AGGACAACGGAAGAATTGCA+AGG | 0.667405 | 4.4:+4041424 | MS.gene20177:intron |
| TGTGTGATTTGGGAGAAGAA+CGG | 0.680750 | 4.4:-4038538 | None:intergenic |
| GTTAATCTCACTATCAACAG+AGG | 0.703089 | 4.4:+4038671 | MS.gene20177:CDS |
| TGATAGTGAGATTAACGCCG+CGG | 0.730942 | 4.4:-4038664 | None:intergenic |
| TCCAATGCCGAAATTCTCCG+CGG | 0.749562 | 4.4:+4038647 | MS.gene20177:CDS |
| CATCAACAGAGAATTCTCTG+GGG | 0.787412 | 4.4:-4039809 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AACTTCTTTTTTTTTTAAAA+CGG | + | chr4.4:4039283-4039302 | MS.gene20177:intron | 10.0% |
| !! | CCACAAAAAATAAAATAAAA+TGG | + | chr4.4:4040367-4040386 | MS.gene20177:intron | 15.0% |
| !!! | CCATTTTATTTTATTTTTTG+TGG | - | chr4.4:4040370-4040389 | None:intergenic | 15.0% |
| !!! | TATTTTATTTTTTGTGGTAA+TGG | - | chr4.4:4040364-4040383 | None:intergenic | 15.0% |
| !! | AAATGATCAATTTCTTGTTA+TGG | + | chr4.4:4038895-4038914 | MS.gene20177:CDS | 20.0% |
| !! | AACTATTTAGATAGATTTAG+AGG | + | chr4.4:4040531-4040550 | MS.gene20177:intron | 20.0% |
| !! | CTAAATCTATCTAAATAGTT+AGG | - | chr4.4:4040531-4040550 | None:intergenic | 20.0% |
| !! | TACATTATATGCTCATTTAT+TGG | + | chr4.4:4041053-4041072 | MS.gene20177:intron | 20.0% |
| !! | TGATAGTTTAGAAGAAAAAA+AGG | - | chr4.4:4041405-4041424 | None:intergenic | 20.0% |
| !!! | AATGTTTTGTTTAATGGTTT+AGG | + | chr4.4:4040863-4040882 | MS.gene20177:intron | 20.0% |
| !!! | ACCTTTTTAAATGAAATCAA+TGG | - | chr4.4:4041254-4041273 | None:intergenic | 20.0% |
| !!! | ATTTCATTTAAAAAGGTACA+TGG | + | chr4.4:4041257-4041276 | MS.gene20177:intron | 20.0% |
| !!! | GACTTATTTTAGCTTATTTA+TGG | + | chr4.4:4039149-4039168 | MS.gene20177:intron | 20.0% |
| !!! | TATTTTGGATGAAATTGATT+CGG | + | chr4.4:4039732-4039751 | MS.gene20177:CDS | 20.0% |
| !!! | TTTTTTTCTTCTAAACTATC+AGG | + | chr4.4:4041404-4041423 | MS.gene20177:intron | 20.0% |
| ! | AAATGAATAATGAACCTCAA+GGG | - | chr4.4:4038966-4038985 | None:intergenic | 25.0% |
| ! | AACTAAAATTGCAAGTTAGT+GGG | - | chr4.4:4041226-4041245 | None:intergenic | 25.0% |
| ! | AAGGATCTTATTACAAAAAC+TGG | + | chr4.4:4040204-4040223 | MS.gene20177:intron | 25.0% |
| ! | AAGTCAGAAACCATAAAAAA+GGG | - | chr4.4:4039543-4039562 | None:intergenic | 25.0% |
| ! | AATGATTCTCCAAAATATCA+AGG | - | chr4.4:4039109-4039128 | None:intergenic | 25.0% |
| ! | ATGTATATACTTGCATCTTA+TGG | + | chr4.4:4040180-4040199 | MS.gene20177:intron | 25.0% |
| ! | TAAATGAATAATGAACCTCA+AGG | - | chr4.4:4038967-4038986 | None:intergenic | 25.0% |
| ! | TATGATAGTCTAATAGTTAG+AGG | + | chr4.4:4040484-4040503 | MS.gene20177:intron | 25.0% |
| ! | TGTATATACTTGCATCTTAT+GGG | + | chr4.4:4040181-4040200 | MS.gene20177:intron | 25.0% |
| ! | TTGAAATTGATGAATGCTTT+GGG | + | chr4.4:4040318-4040337 | MS.gene20177:intron | 25.0% |
| !! | ATTCTAAGTTTTCAACTTGA+AGG | + | chr4.4:4039923-4039942 | MS.gene20177:intron | 25.0% |
| !! | TTCTAAGTTTTCAACTTGAA+GGG | + | chr4.4:4039924-4039943 | MS.gene20177:intron | 25.0% |
| !! | TTTGAAATTGATGAATGCTT+TGG | + | chr4.4:4040317-4040336 | MS.gene20177:intron | 25.0% |
| !! | TTTTCATACACTGTCTATAA+CGG | - | chr4.4:4041342-4041361 | None:intergenic | 25.0% |
| !! | TTTTCTTAGAAAATGGATGT+AGG | + | chr4.4:4041095-4041114 | MS.gene20177:intron | 25.0% |
| !!! | AGATTGCTTTTCTTAGAAAA+TGG | + | chr4.4:4041088-4041107 | MS.gene20177:intron | 25.0% |
| !!! | ATTTTGGATGAAATTGATTC+GGG | + | chr4.4:4039733-4039752 | MS.gene20177:CDS | 25.0% |
| !!! | GCAGTGTTTTTCTTATTTAA+TGG | + | chr4.4:4039585-4039604 | MS.gene20177:intron | 25.0% |
| !!! | GCCATTGATTTCATTTAAAA+AGG | + | chr4.4:4041250-4041269 | MS.gene20177:intron | 25.0% |
| !!! | GTTCTGAATGTTTTGTTTAA+TGG | + | chr4.4:4040857-4040876 | MS.gene20177:intron | 25.0% |
| !!! | GTTTTTAACTTACCATAACA+TGG | - | chr4.4:4039882-4039901 | None:intergenic | 25.0% |
| AAAAGCAATCTTCTACCAAA+TGG | - | chr4.4:4041079-4041098 | None:intergenic | 30.0% | |
| AAAATAAGTCGATCCAAACA+AGG | - | chr4.4:4039139-4039158 | None:intergenic | 30.0% | |
| AAGCTATCTTGGATAACTTA+GGG | - | chr4.4:4039255-4039274 | None:intergenic | 30.0% | |
| AAGTGTGTGTTATGTAATAC+AGG | - | chr4.4:4040815-4040834 | None:intergenic | 30.0% | |
| AATGAATAATGAACCTCAAG+GGG | - | chr4.4:4038965-4038984 | None:intergenic | 30.0% | |
| ACATTTCTATTGAGAAAGTC+AGG | - | chr4.4:4039637-4039656 | None:intergenic | 30.0% | |
| ACGTTAAAATAACATGTGAG+AGG | - | chr4.4:4041130-4041149 | None:intergenic | 30.0% | |
| AGAAAAGACCTACTTTCTTT+AGG | - | chr4.4:4040664-4040683 | None:intergenic | 30.0% | |
| AGAAAATGGATGTAGGTATT+AGG | + | chr4.4:4041102-4041121 | MS.gene20177:intron | 30.0% | |
| CAAGTCAGAAACCATAAAAA+AGG | - | chr4.4:4039544-4039563 | None:intergenic | 30.0% | |
| CCAATACTATGAATTAACCA+CGG | - | chr4.4:4040788-4040807 | None:intergenic | 30.0% | |
| CTATTGTCTTCTCAACTATA+GGG | - | chr4.4:4040398-4040417 | None:intergenic | 30.0% | |
| GAACTAAAATTGCAAGTTAG+TGG | - | chr4.4:4041227-4041246 | None:intergenic | 30.0% | |
| GCTATAACATTATCCTTTGA+GGG | - | chr4.4:4040708-4040727 | None:intergenic | 30.0% | |
| GTAGCTAGCAGAAAATATAT+GGG | - | chr4.4:4040916-4040935 | None:intergenic | 30.0% | |
| TAAGCTATCTTGGATAACTT+AGG | - | chr4.4:4039256-4039275 | None:intergenic | 30.0% | |
| TAATAGTTAGAGGTAGATCA+AGG | + | chr4.4:4040494-4040513 | MS.gene20177:intron | 30.0% | |
| TAGTAACTTCATAATCTGGA+TGG | - | chr4.4:4038763-4038782 | None:intergenic | 30.0% | |
| TATCTAAATAGTTAGGCCAA+TGG | - | chr4.4:4040524-4040543 | None:intergenic | 30.0% | |
| TATTGTCTTCTCAACTATAG+GGG | - | chr4.4:4040397-4040416 | None:intergenic | 30.0% | |
| TCAATAGAAATGTCAACGAA+GGG | + | chr4.4:4039644-4039663 | MS.gene20177:CDS | 30.0% | |
| TCTATTGTCTTCTCAACTAT+AGG | - | chr4.4:4040399-4040418 | None:intergenic | 30.0% | |
| TGAGATGTATTCACATAATG+TGG | - | chr4.4:4041155-4041174 | None:intergenic | 30.0% | |
| TGCTATAACATTATCCTTTG+AGG | - | chr4.4:4040709-4040728 | None:intergenic | 30.0% | |
| TTCCATTTCCTAAAGAAAGT+AGG | + | chr4.4:4040653-4040672 | MS.gene20177:intron | 30.0% | |
| TTGTTATGGCTTATAATGCT+CGG | + | chr4.4:4038909-4038928 | MS.gene20177:CDS | 30.0% | |
| TTTAAATGAAATCAATGGCG+TGG | - | chr4.4:4041249-4041268 | None:intergenic | 30.0% | |
| TTTAAGAATAAAGGCAGCTT+TGG | + | chr4.4:4040946-4040965 | MS.gene20177:intron | 30.0% | |
| TTTCATACACTGTCTATAAC+GGG | - | chr4.4:4041341-4041360 | None:intergenic | 30.0% | |
| TTTGCGACTTAATTGGATTT+GGG | + | chr4.4:4039492-4039511 | MS.gene20177:intron | 30.0% | |
| ! | AATTGATCATTTGAAACACC+AGG | - | chr4.4:4038887-4038906 | None:intergenic | 30.0% |
| ! | AATTTTATCACGACATCACT+TGG | - | chr4.4:4040299-4040318 | None:intergenic | 30.0% |
| ! | AGGGAAAAATTTGCTTGAAA+TGG | + | chr4.4:4038802-4038821 | MS.gene20177:CDS | 30.0% |
| ! | ATGAAGATTTTACAGCTTGT+TGG | + | chr4.4:4040146-4040165 | MS.gene20177:intron | 30.0% |
| ! | ATGATTTTCAATTTACTCCG+TGG | + | chr4.4:4040768-4040787 | MS.gene20177:intron | 30.0% |
| ! | TAAACAACGTATAGCTTGTA+TGG | + | chr4.4:4039314-4039333 | MS.gene20177:intron | 30.0% |
| ! | TTTTGCGACTTAATTGGATT+TGG | + | chr4.4:4039491-4039510 | MS.gene20177:intron | 30.0% |
| !! | ATCATTGTTAAAGCCTTGTT+TGG | + | chr4.4:4039123-4039142 | MS.gene20177:intron | 30.0% |
| !! | TGTTGATGATTACTCACTAT+CGG | + | chr4.4:4039824-4039843 | MS.gene20177:CDS | 30.0% |
| !!! | CCTTAAGTTTTGAGGAAAAT+GGG | + | chr4.4:4040003-4040022 | MS.gene20177:intron | 30.0% |
| !!! | CTTAAGTTTTGAGGAAAATG+GGG | + | chr4.4:4040004-4040023 | MS.gene20177:intron | 30.0% |
| !!! | GTTGTTTTGATAAGCTATCT+TGG | - | chr4.4:4039266-4039285 | None:intergenic | 30.0% |
| !!! | TCCTTAAGTTTTGAGGAAAA+TGG | + | chr4.4:4040002-4040021 | MS.gene20177:intron | 30.0% |
| AACTTACCATAACATGGACA+TGG | - | chr4.4:4039876-4039895 | None:intergenic | 35.0% | |
| ACAAATGGAAAGTAGCTGAA+GGG | - | chr4.4:4040056-4040075 | None:intergenic | 35.0% | |
| ACAATAGAACACCGTTGTTT+AGG | + | chr4.4:4040411-4040430 | MS.gene20177:intron | 35.0% | |
| ACTTACCATAACATGGACAT+GGG | - | chr4.4:4039875-4039894 | None:intergenic | 35.0% | |
| ATAAAAAAGGGCTACACTCA+GGG | - | chr4.4:4039531-4039550 | None:intergenic | 35.0% | |
| ATAAAGGCCAGACATATACT+AGG | - | chr4.4:4040576-4040595 | None:intergenic | 35.0% | |
| ATCATCAACAGAGAATTCTC+TGG | - | chr4.4:4039814-4039833 | None:intergenic | 35.0% | |
| ATCTATGGTAGATGCAATTG+AGG | + | chr4.4:4041458-4041477 | MS.gene20177:CDS | 35.0% | |
| ATGCTCATTTATTGGCCATT+TGG | + | chr4.4:4041061-4041080 | MS.gene20177:intron | 35.0% | |
| ATTAAGCTGGTTATCCAGAT+AGG | + | chr4.4:4039410-4039429 | MS.gene20177:intron | 35.0% | |
| CAATTGCATCTACCATAGAT+AGG | - | chr4.4:4041458-4041477 | None:intergenic | 35.0% | |
| CCAAAATATCAAGGATTACG+AGG | - | chr4.4:4039100-4039119 | None:intergenic | 35.0% | |
| CCAATTAAGTCGCAAAATCA+AGG | - | chr4.4:4039488-4039507 | None:intergenic | 35.0% | |
| CCACTAGTAACTTCATAATC+TGG | - | chr4.4:4038767-4038786 | None:intergenic | 35.0% | |
| CCAGATTATGAAGTTACTAG+TGG | + | chr4.4:4038764-4038783 | MS.gene20177:CDS | 35.0% | |
| CCGTGGTTAATTCATAGTAT+TGG | + | chr4.4:4040785-4040804 | MS.gene20177:intron | 35.0% | |
| CGTAGCTAGCAGAAAATATA+TGG | - | chr4.4:4040917-4040936 | None:intergenic | 35.0% | |
| CTCAATAGAAATGTCAACGA+AGG | + | chr4.4:4039643-4039662 | MS.gene20177:CDS | 35.0% | |
| CTTCTAAACTATCAGGACAA+CGG | + | chr4.4:4041411-4041430 | MS.gene20177:intron | 35.0% | |
| CTTGATACTGTGGTAAAATG+TGG | + | chr4.4:4039005-4039024 | MS.gene20177:intron | 35.0% | |
| GCATAAGTACTTGATTAAGC+TGG | + | chr4.4:4039397-4039416 | MS.gene20177:intron | 35.0% | |
| GTATACAGACGATCTAATTC+AGG | - | chr4.4:4041036-4041055 | None:intergenic | 35.0% | |
| GTCTATCTCAAATCATGCTA+TGG | - | chr4.4:4041198-4041217 | None:intergenic | 35.0% | |
| GTTAATCTCACTATCAACAG+AGG | + | chr4.4:4038671-4038690 | MS.gene20177:CDS | 35.0% | |
| TATACTTGCATCTTATGGGA+AGG | + | chr4.4:4040185-4040204 | MS.gene20177:intron | 35.0% | |
| TCATCAACAGAGAATTCTCT+GGG | - | chr4.4:4039813-4039832 | None:intergenic | 35.0% | |
| TCCATTTGTGTGAATGTACT+CGG | + | chr4.4:4040067-4040086 | MS.gene20177:intron | 35.0% | |
| TCTCATAGATGCCTAAACAA+CGG | - | chr4.4:4040425-4040444 | None:intergenic | 35.0% | |
| TTAAGCTGGTTATCCAGATA+GGG | + | chr4.4:4039411-4039430 | MS.gene20177:intron | 35.0% | |
| TTATGGACGTAAACATCTGT+GGG | + | chr4.4:4039166-4039185 | MS.gene20177:intron | 35.0% | |
| TTCATACACTGTCTATAACG+GGG | - | chr4.4:4041340-4041359 | None:intergenic | 35.0% | |
| TTTATGGACGTAAACATCTG+TGG | + | chr4.4:4039165-4039184 | MS.gene20177:intron | 35.0% | |
| TTTCCTCAAAACTTAAGGAG+AGG | - | chr4.4:4040001-4040020 | None:intergenic | 35.0% | |
| ! | AAACATCTGTGGGATTGTTT+TGG | + | chr4.4:4039176-4039195 | MS.gene20177:intron | 35.0% |
| ! | CACATTTTACCACAGTATCA+AGG | - | chr4.4:4039007-4039026 | None:intergenic | 35.0% |
| ! | CCCATTTTCCTCAAAACTTA+AGG | - | chr4.4:4040006-4040025 | None:intergenic | 35.0% |
| ! | CCTCGTAATCCTTGATATTT+TGG | + | chr4.4:4039097-4039116 | MS.gene20177:intron | 35.0% |
| ! | CCTTGATTTTGCGACTTAAT+TGG | + | chr4.4:4039485-4039504 | MS.gene20177:intron | 35.0% |
| ! | GACCTACTTTCTTTAGGAAA+TGG | - | chr4.4:4040658-4040677 | None:intergenic | 35.0% |
| ! | TAGTATATGTCTGGCCTTTA+TGG | + | chr4.4:4040575-4040594 | MS.gene20177:intron | 35.0% |
| ! | TTTCCTCTCCTTAAGTTTTG+AGG | + | chr4.4:4039995-4040014 | MS.gene20177:intron | 35.0% |
| !! | AATGTACTCGGTTTTAGCAA+AGG | + | chr4.4:4040079-4040098 | MS.gene20177:intron | 35.0% |
| !! | TAATGGTTTAGGTGCTGATT+TGG | + | chr4.4:4040874-4040893 | MS.gene20177:intron | 35.0% |
| !!! | AGTGGTAGTGTTGTTTTCAA+AGG | + | chr4.4:4038782-4038801 | MS.gene20177:CDS | 35.0% |
| !!! | GGATTGTTTTGGAAAGCTTT+TGG | + | chr4.4:4039187-4039206 | MS.gene20177:intron | 35.0% |
| !!! | GTGGTAGTGTTGTTTTCAAA+GGG | + | chr4.4:4038783-4038802 | MS.gene20177:CDS | 35.0% |
| AATGCTCGGAGAAAGAAACT+TGG | + | chr4.4:4038923-4038942 | MS.gene20177:CDS | 40.0% | |
| AATGTCAACGAAGGGTTTAG+TGG | + | chr4.4:4039652-4039671 | MS.gene20177:CDS | 40.0% | |
| ACCGAGTACATTCACACAAA+TGG | - | chr4.4:4040071-4040090 | None:intergenic | 40.0% | |
| ACTTCAGCTGATAATCCTCT+AGG | - | chr4.4:4040629-4040648 | None:intergenic | 40.0% | |
| ACTTTCGCTAAGGTTCTTGT+GGG | + | chr4.4:4038737-4038756 | MS.gene20177:CDS | 40.0% | |
| ATCATGGGAAAAAACGGTTC+TGG | + | chr4.4:4038707-4038726 | MS.gene20177:CDS | 40.0% | |
| ATCTGATCTTCTCTCCCTAT+CGG | - | chr4.4:4040463-4040482 | None:intergenic | 40.0% | |
| CACAAATGGAAAGTAGCTGA+AGG | - | chr4.4:4040057-4040076 | None:intergenic | 40.0% | |
| CACGCTATCATGGGAAAAAA+CGG | + | chr4.4:4038701-4038720 | MS.gene20177:CDS | 40.0% | |
| CATAAAAAAGGGCTACACTC+AGG | - | chr4.4:4039532-4039551 | None:intergenic | 40.0% | |
| CATCAACAGAGAATTCTCTG+GGG | - | chr4.4:4039812-4039831 | None:intergenic | 40.0% | |
| CGTTGTTATCCTTGATACTG+TGG | + | chr4.4:4038995-4039014 | MS.gene20177:intron | 40.0% | |
| CTCTGATCCTAGTATATGTC+TGG | + | chr4.4:4040566-4040585 | MS.gene20177:intron | 40.0% | |
| GGAGAAGAACGGAATTGAAA+TGG | - | chr4.4:4038530-4038549 | None:intergenic | 40.0% | |
| GGTAGATCAAGGAAAACCAT+TGG | + | chr4.4:4040505-4040524 | MS.gene20177:intron | 40.0% | |
| GTGGGTTCATCTACATTGAA+GGG | - | chr4.4:4040607-4040626 | None:intergenic | 40.0% | |
| GTTGTTTAGGCATCTATGAG+AGG | + | chr4.4:4040424-4040443 | MS.gene20177:intron | 40.0% | |
| TAAAAAAGGGCTACACTCAG+GGG | - | chr4.4:4039530-4039549 | None:intergenic | 40.0% | |
| TCAGTCTCAGACTTTAAGTG+AGG | + | chr4.4:4039953-4039972 | MS.gene20177:intron | 40.0% | |
| ! | AAACTTGGTCTTCCTGAACT+TGG | + | chr4.4:4038938-4038957 | MS.gene20177:CDS | 40.0% |
| ! | AACATTATCCTTTGAGGGAC+TGG | - | chr4.4:4040703-4040722 | None:intergenic | 40.0% |
| ! | ACATTATCCTTTGAGGGACT+GGG | - | chr4.4:4040702-4040721 | None:intergenic | 40.0% |
| ! | ATCTTGCAGCTTGCAGTTTT+GGG | + | chr4.4:4039697-4039716 | MS.gene20177:CDS | 40.0% |
| ! | GGGTTCAGGTGCTTAATTTT+AGG | + | chr4.4:4040024-4040043 | MS.gene20177:intron | 40.0% |
| ! | TGTGTGATTTGGGAGAAGAA+CGG | - | chr4.4:4038541-4038560 | None:intergenic | 40.0% |
| !! | CTGATTTGGCAACTTTAGCA+GGG | + | chr4.4:4040888-4040907 | MS.gene20177:intron | 40.0% |
| !! | GGATGAAATTGATTCGGGAT+TGG | + | chr4.4:4039738-4039757 | MS.gene20177:CDS | 40.0% |
| !! | GGCATTGGATTCAACGATTT+TGG | - | chr4.4:4038636-4038655 | None:intergenic | 40.0% |
| !! | TGGTAAAAGCACTTTCGCTA+AGG | + | chr4.4:4038727-4038746 | MS.gene20177:CDS | 40.0% |
| !! | TTTTGAGGAAAATGGGGTTC+AGG | + | chr4.4:4040010-4040029 | MS.gene20177:intron | 40.0% |
| !!! | CTGAGTGTAGCCCTTTTTTA+TGG | + | chr4.4:4039530-4039549 | MS.gene20177:intron | 40.0% |
| AACGGAAGAATTGCAAGGAC+AGG | + | chr4.4:4041429-4041448 | MS.gene20177:CDS | 45.0% | |
| AACTGCATTTAGGCCCTATC+TGG | - | chr4.4:4039427-4039446 | None:intergenic | 45.0% | |
| ACCATAACATGGACATGGGA+GGG | - | chr4.4:4039871-4039890 | None:intergenic | 45.0% | |
| AGGACAACGGAAGAATTGCA+AGG | + | chr4.4:4041424-4041443 | MS.gene20177:intron | 45.0% | |
| AGGCGAAATTCACGCTATCA+TGG | + | chr4.4:4038691-4038710 | MS.gene20177:CDS | 45.0% | |
| ATGTAGATGAACCCACCTAG+AGG | + | chr4.4:4040611-4040630 | MS.gene20177:intron | 45.0% | |
| ATTAACGCCGCGGAGAATTT+CGG | - | chr4.4:4038657-4038676 | None:intergenic | 45.0% | |
| ATTGGATGTTGATGCGCTCA+GGG | + | chr4.4:4039756-4039775 | MS.gene20177:CDS | 45.0% | |
| CAATCACCTGTTGCAATTCC+TGG | + | chr4.4:4038866-4038885 | MS.gene20177:CDS | 45.0% | |
| CACGACATCACTTGGTACAA+TGG | - | chr4.4:4040291-4040310 | None:intergenic | 45.0% | |
| CACTTTCGCTAAGGTTCTTG+TGG | + | chr4.4:4038736-4038755 | MS.gene20177:CDS | 45.0% | |
| CAGCTGATAATCCTCTAGGT+GGG | - | chr4.4:4040625-4040644 | None:intergenic | 45.0% | |
| CCTTCAAGTGCTCTTTCTTC+AGG | - | chr4.4:4038830-4038849 | None:intergenic | 45.0% | |
| GAAACACCAGGAATTGCAAC+AGG | - | chr4.4:4038875-4038894 | None:intergenic | 45.0% | |
| GGCGAAATTCACGCTATCAT+GGG | + | chr4.4:4038692-4038711 | MS.gene20177:CDS | 45.0% | |
| GTAGATGCAATTGAGGCAGA+TGG | + | chr4.4:4041465-4041484 | MS.gene20177:CDS | 45.0% | |
| GTTCATCTACATTGAAGGGC+CGG | - | chr4.4:4040603-4040622 | None:intergenic | 45.0% | |
| TACCATAACATGGACATGGG+AGG | - | chr4.4:4039872-4039891 | None:intergenic | 45.0% | |
| TCAGCTGATAATCCTCTAGG+TGG | - | chr4.4:4040626-4040645 | None:intergenic | 45.0% | |
| TGAGGCAGATGGATATGAAC+TGG | + | chr4.4:4041476-4041495 | MS.gene20177:CDS | 45.0% | |
| TGCATGCCTGACTGCAATTA+AGG | - | chr4.4:4039457-4039476 | None:intergenic | 45.0% | |
| TTAGTTTCCCAGTCCCTCAA+AGG | + | chr4.4:4040692-4040711 | MS.gene20177:intron | 45.0% | |
| ! | GATCTTGCAGCTTGCAGTTT+TGG | + | chr4.4:4039696-4039715 | MS.gene20177:CDS | 45.0% |
| ! | GGTGGGTTCATCTACATTGA+AGG | - | chr4.4:4040608-4040627 | None:intergenic | 45.0% |
| ! | TCTTGCAGCTTGCAGTTTTG+GGG | + | chr4.4:4039698-4039717 | MS.gene20177:CDS | 45.0% |
| ! | TGATAGTGAGATTAACGCCG+CGG | - | chr4.4:4038667-4038686 | None:intergenic | 45.0% |
| !! | AAGATCGTTGACTTGGAGGA+GGG | - | chr4.4:4038609-4038628 | None:intergenic | 45.0% |
| !! | CCTGAAGAAAGAGCACTTGA+AGG | + | chr4.4:4038827-4038846 | MS.gene20177:CDS | 45.0% |
| !! | GCTGATTTGGCAACTTTAGC+AGG | + | chr4.4:4040887-4040906 | MS.gene20177:intron | 45.0% |
| !!! | TTTTTTTTTTTTAAGAATAA+AGG | + | chr4.4:4040937-4040956 | MS.gene20177:intron | 5.0% |
| AAGGACAGGCGACCTATCTA+TGG | + | chr4.4:4041443-4041462 | MS.gene20177:CDS | 50.0% | |
| ACCCTCCCATGTCCATGTTA+TGG | + | chr4.4:4039867-4039886 | MS.gene20177:CDS | 50.0% | |
| AGGCCGCATCAACTGCATTT+AGG | - | chr4.4:4039437-4039456 | None:intergenic | 50.0% | |
| ATGCGGCCTTAATTGCAGTC+AGG | + | chr4.4:4039448-4039467 | MS.gene20177:intron | 50.0% | |
| GATTGGATGTTGATGCGCTC+AGG | + | chr4.4:4039755-4039774 | MS.gene20177:CDS | 50.0% | |
| GGCATCTATGAGAGGACATG+TGG | + | chr4.4:4040432-4040451 | MS.gene20177:intron | 50.0% | |
| GTCAACGAAGGGTTTAGTGG+AGG | + | chr4.4:4039655-4039674 | MS.gene20177:CDS | 50.0% | |
| TCCAATGCCGAAATTCTCCG+CGG | + | chr4.4:4038647-4038666 | MS.gene20177:CDS | 50.0% | |
| TTGCGGCGAGTGTGTGATTT+GGG | - | chr4.4:4038551-4038570 | None:intergenic | 50.0% | |
| TTTGCGGCGAGTGTGTGATT+TGG | - | chr4.4:4038552-4038571 | None:intergenic | 50.0% | |
| ! | ATGTCTGGCCTTTATGGCAC+CGG | + | chr4.4:4040581-4040600 | MS.gene20177:intron | 50.0% |
| ! | CACTGTCTATAACGGGGATC+AGG | - | chr4.4:4041334-4041353 | None:intergenic | 50.0% |
| ! | GGGCCTAAATGCAGTTGATG+CGG | + | chr4.4:4039431-4039450 | MS.gene20177:intron | 50.0% |
| ! | GGGGGCAGATTTGGCTATTT+TGG | + | chr4.4:4039717-4039736 | MS.gene20177:CDS | 50.0% |
| ! | TGGCTCGAAGATCGTTGACT+TGG | - | chr4.4:4038616-4038635 | None:intergenic | 50.0% |
| !! | AGATCGTTGACTTGGAGGAG+GGG | - | chr4.4:4038608-4038627 | None:intergenic | 50.0% |
| !! | CTCGAAGATCGTTGACTTGG+AGG | - | chr4.4:4038613-4038632 | None:intergenic | 50.0% |
| !! | CTTGCAGCTTGCAGTTTTGG+GGG | + | chr4.4:4039699-4039718 | MS.gene20177:CDS | 50.0% |
| !! | GAAGATCGTTGACTTGGAGG+AGG | - | chr4.4:4038610-4038629 | None:intergenic | 50.0% |
| !! | GACATGTGGAAGCACCGATA+GGG | + | chr4.4:4040446-4040465 | MS.gene20177:intron | 50.0% |
| !!! | TGCAGTTTTGGGGGCAGATT+TGG | + | chr4.4:4039708-4039727 | MS.gene20177:CDS | 50.0% |
| AAGGGCTACACTCAGGGGTT+TGG | - | chr4.4:4039525-4039544 | None:intergenic | 55.0% | |
| ACCTCAAGGGGTCCAAGTTC+AGG | - | chr4.4:4038953-4038972 | None:intergenic | 55.0% | |
| CAAATTCGCCTGCTTTGCGG+CGG | + | chr4.4:4038568-4038587 | MS.gene20177:CDS | 55.0% | |
| CCGCAAAGCAGGCGAATTTG+CGG | - | chr4.4:4038568-4038587 | None:intergenic | 55.0% | |
| CCGCAAATTCGCCTGCTTTG+CGG | + | chr4.4:4038565-4038584 | MS.gene20177:CDS | 55.0% | |
| TCCTGAACTTGGACCCCTTG+AGG | + | chr4.4:4038949-4038968 | MS.gene20177:CDS | 55.0% | |
| TGTTGATGCGCTCAGGGATG+TGG | + | chr4.4:4039762-4039781 | MS.gene20177:CDS | 55.0% | |
| !! | GGACATGTGGAAGCACCGAT+AGG | + | chr4.4:4040445-4040464 | MS.gene20177:intron | 55.0% |
| !! | TTGAAGGGCCGGTGCCATAA+AGG | - | chr4.4:4040592-4040611 | None:intergenic | 55.0% |
| GACTTGGAGGAGGGGAACCT+CGG | - | chr4.4:4038600-4038619 | None:intergenic | 60.0% | |
| GCCGCGGAGAATTTCGGCAT+TGG | - | chr4.4:4038651-4038670 | None:intergenic | 60.0% | |
| GCTCAGGGATGTGGCAAGTG+CGG | + | chr4.4:4039771-4039790 | MS.gene20177:CDS | 60.0% | |
| GGTGCTCGCCGCCGCAAAGC+AGG | - | chr4.4:4038579-4038598 | None:intergenic | 75.0% | |
| ! | CTTTGCGGCGGCGAGCACCG+AGG | + | chr4.4:4038580-4038599 | MS.gene20177:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 4038503 | 4041515 | 4038503 | ID=MS.gene20177 |
| chr4.4 | mRNA | 4038503 | 4041515 | 4038503 | ID=MS.gene20177.t1;Parent=MS.gene20177 |
| chr4.4 | exon | 4038503 | 4038970 | 4038503 | ID=MS.gene20177.t1.exon1;Parent=MS.gene20177.t1 |
| chr4.4 | CDS | 4038503 | 4038970 | 4038503 | ID=cds.MS.gene20177.t1;Parent=MS.gene20177.t1 |
| chr4.4 | exon | 4039589 | 4039888 | 4039589 | ID=MS.gene20177.t1.exon2;Parent=MS.gene20177.t1 |
| chr4.4 | CDS | 4039589 | 4039888 | 4039589 | ID=cds.MS.gene20177.t1;Parent=MS.gene20177.t1 |
| chr4.4 | exon | 4041426 | 4041515 | 4041426 | ID=MS.gene20177.t1.exon3;Parent=MS.gene20177.t1 |
| chr4.4 | CDS | 4041426 | 4041515 | 4041426 | ID=cds.MS.gene20177.t1;Parent=MS.gene20177.t1 |
| Gene Sequence |
| Protein sequence |
