AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene014786

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene014786.t1 MTR_3g107970 95.426 481 19 1 1 481 1 478 0.0 947
MS.gene014786.t1 MTR_1g011470 58.099 463 138 7 17 477 14 422 0.0 518
MS.gene014786.t1 MTR_2g102520 48.354 486 218 13 11 477 8 479 1.01e-130 387
MS.gene014786.t1 MTR_2g102550 44.000 475 202 7 3 469 2 420 9.68e-124 368
MS.gene014786.t1 MTR_3g088415 54.643 280 125 2 201 478 225 504 1.08e-103 319
MS.gene014786.t1 MTR_3g088405 53.704 270 123 1 200 467 227 496 3.71e-103 318
MS.gene014786.t1 MTR_1g018680 51.095 274 132 1 205 476 80 353 3.15e-91 282
MS.gene014786.t1 MTR_3g088415 58.986 217 89 0 200 416 224 440 2.11e-90 283
MS.gene014786.t1 MTR_3g102530 48.029 279 143 1 196 472 64 342 9.03e-86 268
MS.gene014786.t1 MTR_3g102510 46.212 264 142 0 209 472 67 330 8.32e-81 254
MS.gene014786.t1 MTR_3g102520 46.324 272 144 1 203 472 78 349 2.80e-79 251
MS.gene014786.t1 MTR_3g102560 50.787 254 118 2 221 472 69 317 1.10e-73 235
MS.gene014786.t1 MTR_3g102540 50.781 256 116 5 220 472 13 261 2.74e-72 230
MS.gene014786.t1 MTR_3g088415 62.805 164 61 0 200 363 224 387 2.44e-71 232
MS.gene014786.t1 MTR_5g023790 40.959 271 152 4 201 470 156 419 1.54e-57 196
MS.gene014786.t1 MTR_5g088980 40.590 271 152 6 202 470 150 413 2.58e-57 196
MS.gene014786.t1 MTR_5g023790 43.966 232 122 4 201 431 156 380 4.14e-55 189
MS.gene014786.t1 MTR_8g074000 39.608 255 147 3 216 470 176 423 6.32e-55 190
MS.gene014786.t1 MTR_7g089080 40.511 274 154 7 201 470 183 451 2.44e-54 197
MS.gene014786.t1 MTR_5g023790 44.643 168 91 2 201 367 156 322 1.56e-39 146
MS.gene014786.t1 MTR_3g060770 30.556 252 160 7 185 431 2 243 1.56e-25 106
MS.gene014786.t1 MTR_3g061680 30.638 235 149 6 202 431 8 233 8.05e-25 104
MS.gene014786.t1 MTR_3g060410 34.375 192 117 5 245 431 131 318 1.00e-24 105
MS.gene014786.t1 MTR_3g060400 31.250 224 140 6 213 431 25 239 1.27e-24 103
MS.gene014786.t1 MTR_3g460990 31.250 224 140 6 213 431 25 239 1.27e-24 103
MS.gene014786.t1 MTR_3g060820 30.204 245 151 7 192 431 4 233 7.76e-24 101
MS.gene014786.t1 MTR_1g032850 35.359 181 103 5 234 411 362 531 1.43e-18 89.0
MS.gene014786.t1 MTR_5g044040 40.260 77 46 0 271 347 7 83 8.53e-17 77.0
MS.gene014786.t1 MTR_5g011900 29.730 148 101 2 242 388 95 240 3.02e-15 75.9
MS.gene014786.t1 MTR_3g100710 28.571 182 117 4 228 400 74 251 2.83e-14 74.7
MS.gene014786.t1 MTR_6g045270 27.972 286 171 13 208 481 38 300 2.53e-13 71.2
MS.gene014786.t1 MTR_4g080990 26.816 179 124 4 228 400 69 246 1.92e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene014786.t1 AT5G25380 51.363 477 169 10 10 477 19 441 6.39e-147 427
MS.gene014786.t1 AT5G11300 51.489 470 166 10 13 477 22 434 6.70e-147 427
MS.gene014786.t1 AT5G25380 50.420 476 169 8 10 477 19 435 1.79e-145 424
MS.gene014786.t1 AT5G25380 50.420 476 169 8 10 477 19 435 1.79e-145 424
MS.gene014786.t1 AT5G25380 50.327 459 162 7 10 461 19 418 6.31e-141 411
MS.gene014786.t1 AT1G80370 47.072 444 195 6 31 469 42 450 6.78e-129 382
MS.gene014786.t1 AT1G15570 48.463 423 187 7 62 477 52 450 4.51e-126 374
MS.gene014786.t1 AT5G11300 49.392 411 147 9 13 419 22 375 8.64e-119 355
MS.gene014786.t1 AT1G44110 55.147 272 122 0 196 467 174 445 5.09e-110 334
MS.gene014786.t1 AT5G43080 52.399 271 129 0 202 472 73 343 6.86e-100 304
MS.gene014786.t1 AT5G43080 52.768 271 123 1 202 472 73 338 5.72e-99 301
MS.gene014786.t1 AT1G47210 49.324 296 146 2 179 472 67 360 3.32e-98 300
MS.gene014786.t1 AT1G77390 52.500 280 131 2 200 477 162 441 1.18e-96 299
MS.gene014786.t1 AT1G47220 52.416 269 126 1 202 468 42 310 1.45e-92 284
MS.gene014786.t1 AT1G47230 48.905 274 138 1 201 472 80 353 1.51e-90 280
MS.gene014786.t1 AT1G47230 48.727 275 138 2 201 472 80 354 1.06e-88 276
MS.gene014786.t1 AT5G06150 40.278 288 161 6 193 479 158 435 6.52e-59 201
MS.gene014786.t1 AT1G20610 39.114 271 157 4 201 470 161 424 1.24e-55 191
MS.gene014786.t1 AT1G76310 40.146 274 155 5 199 470 159 425 3.63e-55 190
MS.gene014786.t1 AT3G11520 40.959 271 151 5 201 470 143 405 1.73e-53 185
MS.gene014786.t1 AT1G76310 43.404 235 124 5 199 431 159 386 2.46e-52 182
MS.gene014786.t1 AT3G11520 44.351 239 124 5 201 438 143 373 2.69e-52 181
MS.gene014786.t1 AT2G26760 40.769 260 143 7 201 457 114 365 4.02e-52 181
MS.gene014786.t1 AT1G16330 39.216 255 148 3 216 470 395 642 1.04e-49 180
MS.gene014786.t1 AT1G76310 36.424 302 155 6 199 470 159 453 2.59e-49 175
MS.gene014786.t1 AT4G37490 37.050 278 160 8 200 470 148 417 5.99e-49 174
MS.gene014786.t1 AT2G17620 40.672 268 151 4 201 467 155 415 3.36e-48 172
MS.gene014786.t1 AT4G35620 39.700 267 153 4 201 466 156 415 1.63e-47 170
MS.gene014786.t1 AT4G35620 42.672 232 125 4 201 431 156 380 6.28e-46 164
MS.gene014786.t1 AT5G06150 42.045 176 99 3 193 367 158 331 4.67e-39 145
MS.gene014786.t1 AT1G76310 45.029 171 91 3 199 367 159 328 9.31e-39 144
MS.gene014786.t1 AT1G20590 43.312 157 83 2 275 431 63 213 3.91e-34 129
MS.gene014786.t1 AT1G47210 49.219 128 61 2 179 304 67 192 3.57e-32 122
MS.gene014786.t1 AT1G34460 34.091 176 93 4 193 367 234 387 5.45e-22 99.0
MS.gene014786.t1 AT1G34460 34.091 176 93 4 193 367 248 401 6.08e-22 99.0
MS.gene014786.t1 AT1G34460 34.091 176 93 4 193 367 248 401 6.08e-22 99.0
MS.gene014786.t1 AT1G34460 34.091 176 93 4 193 367 248 401 6.08e-22 99.0
MS.gene014786.t1 AT1G34460 34.091 176 93 4 193 367 248 401 6.08e-22 99.0
MS.gene014786.t1 AT1G34460 34.091 176 93 4 193 367 248 401 6.36e-22 99.0
MS.gene014786.t1 AT1G34460 34.091 176 93 4 193 367 245 398 6.55e-22 99.0
MS.gene014786.t1 AT1G34460 34.091 176 93 4 193 367 245 398 6.55e-22 99.0
MS.gene014786.t1 AT1G34460 34.091 176 93 4 193 367 248 401 8.30e-22 98.6
MS.gene014786.t1 AT1G14750 34.969 163 96 4 247 405 384 540 6.52e-16 80.9
MS.gene014786.t1 AT1G14750 34.969 163 96 4 247 405 384 540 8.47e-16 80.5
MS.gene014786.t1 AT1G14750 34.969 163 96 4 247 405 216 372 9.17e-16 79.7
MS.gene014786.t1 AT1G14750 34.969 163 95 5 247 405 216 371 1.51e-14 75.9
MS.gene014786.t1 AT5G65420 25.957 235 157 8 182 403 5 235 8.98e-11 63.5

Find 94 sgRNAs with CRISPR-Local

Find 252 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTTAAAGGATTCTCAAATT+TGG 0.182649 3.1:+85736594 MS.gene014786:CDS
CAGATCAAGGGCAAAGGTTT+TGG 0.191093 3.1:+85735080 MS.gene014786:CDS
TGGGATTTATACCTGAAAAT+TGG 0.195568 3.1:-85735277 None:intergenic
CGAACTTTGTTGTATATATC+AGG 0.212202 3.1:-85736629 None:intergenic
AACAGTGACTGCACCGGTTT+TGG 0.269524 3.1:-85739506 None:intergenic
CTGCAACTTCTCCATGTAAT+TGG 0.276568 3.1:-85737007 None:intergenic
TACATACCTGAGAAATGTTT+TGG 0.301501 3.1:-85737988 None:intergenic
GAGTGGACGCTCTTCATCTT+TGG 0.302032 3.1:-85735049 None:intergenic
TATTGAAATAAACCTTTGTT+TGG 0.308273 3.1:-85736305 None:intergenic
TCTTGCTGAACTGGAATTCC+TGG 0.315133 3.1:+85738472 MS.gene014786:CDS
ACCGGTGCAGTCACTGTTCC+AGG 0.328369 3.1:+85739511 MS.gene014786:CDS
ACAGGTTCCTCTTGCTGAAC+TGG 0.342894 3.1:+85738463 MS.gene014786:intron
TTCTCCATGTAATTGGTTGA+TGG 0.359361 3.1:-85737000 None:intergenic
CACCATTGCTGCAGTAACTT+TGG 0.388234 3.1:+85736166 MS.gene014786:CDS
TGCAAGTAACACCAAGCAAC+TGG 0.415916 3.1:-85737459 None:intergenic
CAAAACCTTTGCCCTTGATC+TGG 0.423251 3.1:-85735079 None:intergenic
AATAAACCTTTGTTTGGACT+TGG 0.425078 3.1:-85736299 None:intergenic
TCTTCCAGTGCAAGAACAAC+TGG 0.426769 3.1:-85738751 None:intergenic
ACAGTAAGGTAAAGAGTGTC+TGG 0.432601 3.1:-85737385 None:intergenic
AAGAGCAACAGCTTCCAAAA+AGG 0.433513 3.1:+85735131 MS.gene014786:CDS
TGAGTGGTTGAGGGTCCATC+TGG 0.438657 3.1:-85738582 None:intergenic
TGCGTGGAATTCTGATTGAT+TGG 0.439226 3.1:+85737049 MS.gene014786:CDS
ATATATGCAGACTACAACTC+TGG 0.439974 3.1:+85738693 MS.gene014786:intron
GGCAAAACTGTCTCCAAAAC+CGG 0.446811 3.1:+85739493 MS.gene014786:CDS
TAGCTCTGAAGCTTTGTAGT+TGG 0.450188 3.1:-85738725 None:intergenic
AACATGGTCACTTATGTTGT+TGG 0.450701 3.1:-85736216 None:intergenic
TATCGATGTCTACAAAGGTC+AGG 0.459319 3.1:-85736568 None:intergenic
ATGGATGTTCTGAGTGGTTG+AGG 0.460808 3.1:-85738592 None:intergenic
CATAAATTTACACTTGAGCC+TGG 0.467011 3.1:-85739529 None:intergenic
CTGCTGTATTCCTTGCCAGA+TGG 0.472091 3.1:+85738567 MS.gene014786:CDS
CCACAACCAAAACATTTCTC+AGG 0.475913 3.1:+85737982 MS.gene014786:CDS
ATCAGAATTCCACGCATGCT+TGG 0.476428 3.1:-85737042 None:intergenic
CACTCAGAATTACCAGATCA+AGG 0.485115 3.1:+85735067 MS.gene014786:CDS
TTGTGCTGATGAAACTTCAA+TGG 0.487200 3.1:-85736081 None:intergenic
GATCAATGAGGTTCACAGTA+AGG 0.489451 3.1:-85737399 None:intergenic
TGCTTCATGTGACAGTTCAA+TGG 0.489558 3.1:+85739467 MS.gene014786:intron
TGTAAGAAGATTGTGCTGCT+TGG 0.497059 3.1:-85738104 None:intergenic
ATGTTCCTCACCGTAAAAGA+AGG 0.498778 3.1:+85735193 MS.gene014786:CDS
AAAACCAGTTGTTCTTGCAC+TGG 0.503437 3.1:+85738747 MS.gene014786:CDS
CCTCACCGTAAAAGAAGGGC+AGG 0.504738 3.1:+85735198 MS.gene014786:CDS
GGTTTCTGAGGAATATAAGC+TGG 0.509301 3.1:+85737360 MS.gene014786:intron
GAACTTTGTTGTATATATCA+GGG 0.514973 3.1:-85736628 None:intergenic
AATTCTGATTGATTGGCTTG+TGG 0.519075 3.1:+85737056 MS.gene014786:CDS
CATAAATATGATTTGTGAGA+AGG 0.520200 3.1:+85736529 MS.gene014786:CDS
TGAAGTTTCATCAGCACAAG+AGG 0.526624 3.1:+85736085 MS.gene014786:CDS
AGCATGGAGAGAACAACCTT+TGG 0.528068 3.1:-85738788 None:intergenic
TTACTGTGAACCTCATTGAT+CGG 0.529430 3.1:+85737401 MS.gene014786:CDS
TATATTTCTCACGTATAGCA+TGG 0.531941 3.1:-85738804 None:intergenic
TGGATGTTCTGAGTGGTTGA+GGG 0.532302 3.1:-85738591 None:intergenic
TCAACCACTCAGAACATCCA+TGG 0.534173 3.1:+85738594 MS.gene014786:CDS
AAACACAGGCTCCAGTTGCT+TGG 0.536048 3.1:+85737448 MS.gene014786:CDS
AGAATTGTCTACCATAAAGA+TGG 0.537932 3.1:+85736130 MS.gene014786:CDS
GCAGAAGCAGCCACACGAGA+AGG 0.540170 3.1:-85738548 None:intergenic
TTGGACATACAATGTTCAGT+TGG 0.549012 3.1:-85736197 None:intergenic
GGACCCTCTTCGGAAAATGA+AGG 0.550131 3.1:+85735105 MS.gene014786:CDS
ACCTTTGTTTGGACTTGGAG+AGG 0.555698 3.1:-85736294 None:intergenic
AACCAAAGTTACTGCAGCAA+TGG 0.556672 3.1:-85736168 None:intergenic
AAGACCATCAACCAATTACA+TGG 0.561852 3.1:+85736996 MS.gene014786:CDS
TTGTGAGAAGGTAGGAGCCT+CGG 0.564379 3.1:+85736541 MS.gene014786:CDS
CAAGTTTGATTCAGAAACAC+AGG 0.567317 3.1:+85737434 MS.gene014786:CDS
ACAAGAGGATGTTAAAGAGA+AGG 0.567620 3.1:+85736100 MS.gene014786:CDS
AGCAGCACAATCTTCTTACA+AGG 0.568751 3.1:+85738107 MS.gene014786:CDS
GCTCTGCTAAATAATTTGCC+AGG 0.570353 3.1:-85738490 None:intergenic
AACTTTGTTGTATATATCAG+GGG 0.581055 3.1:-85736627 None:intergenic
TGTTTAACACGTTTATCATG+TGG 0.581458 3.1:-85735252 None:intergenic
TGAGAAATATAAACATGAGA+AGG 0.585853 3.1:+85738816 MS.gene014786:CDS
GCCTGGAACAGTGACTGCAC+CGG 0.595943 3.1:-85739512 None:intergenic
GACCCTCTTCGGAAAATGAA+GGG 0.596652 3.1:+85735106 MS.gene014786:CDS
GATCTGCAACTTAATACCAA+AGG 0.597942 3.1:+85738772 MS.gene014786:CDS
ACAGTTTCTACCTTCTCGTG+TGG 0.603003 3.1:+85738538 MS.gene014786:CDS
TCTGATTGATTGGCTTGTGG+AGG 0.610856 3.1:+85737059 MS.gene014786:CDS
TACAAAGGTCAGGCGATCCG+AGG 0.611523 3.1:-85736558 None:intergenic
TAATACATACACAAAAGAAG+AGG 0.613454 3.1:+85737905 MS.gene014786:CDS
GGTTGAGGGTCCATCTGGCA+AGG 0.616376 3.1:-85738577 None:intergenic
AATTACCAGATCAAGGGCAA+AGG 0.620424 3.1:+85735074 MS.gene014786:CDS
TTGAGAGAAACCGATCAATG+AGG 0.621952 3.1:-85737411 None:intergenic
AGGAATTCCAGTTCAGCAAG+AGG 0.623808 3.1:-85738470 None:intergenic
CAGATAACTGAAAACGCAGA+AGG 0.624641 3.1:-85737956 None:intergenic
ACTCAGAATTACCAGATCAA+GGG 0.628344 3.1:+85735068 MS.gene014786:CDS
ATGCAAGAATGTGTGAACTC+TGG 0.628364 3.1:+85736260 MS.gene014786:CDS
AAGCAAAATTCTTCCACTCG+AGG 0.634099 3.1:-85737873 None:intergenic
CAACCACTCAGAACATCCAT+GGG 0.636239 3.1:+85738595 MS.gene014786:CDS
ACATTCTTGCATTGAAAGTG+TGG 0.640397 3.1:-85736249 None:intergenic
TGTTCCTCACCGTAAAAGAA+GGG 0.641902 3.1:+85735194 MS.gene014786:CDS
AATATGATTTGTGAGAAGGT+AGG 0.642690 3.1:+85736533 MS.gene014786:CDS
GATATTTCTCCAAGCATGCG+TGG 0.654313 3.1:+85737033 MS.gene014786:CDS
CTTGATCTGGTAATTCTGAG+TGG 0.660376 3.1:-85735066 None:intergenic
ACCTCTCCAAGTCCAAACAA+AGG 0.667488 3.1:+85736293 MS.gene014786:CDS
ATACCCATGGATGTTCTGAG+TGG 0.668616 3.1:-85738598 None:intergenic
AGAGATGTGTGCTCCTCGAG+TGG 0.670751 3.1:+85737860 MS.gene014786:CDS
CATGTGACAGTTCAATGGTG+TGG 0.678244 3.1:+85739472 MS.gene014786:intron
GTGTGGTGTCTGTCATAACA+TGG 0.706964 3.1:-85736232 None:intergenic
CTCACCGTAAAAGAAGGGCA+GGG 0.713304 3.1:+85735199 MS.gene014786:CDS
CAACAAAGTTCGAGTCACCG+AGG 0.719869 3.1:+85736640 MS.gene014786:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATATAAAAAAAGTTACT+AGG + chr3.1:85736416-85736435 MS.gene014786:intron 10.0%
!!! TAATGAAAATTTTATGTTTT+GGG - chr3.1:85735706-85735725 None:intergenic 10.0%
!! GATTGTTTAATAATGAATTA+CGG - chr3.1:85736671-85736690 None:intergenic 15.0%
!! TATTTATATCTTCTAAACAA+AGG - chr3.1:85738648-85738667 None:intergenic 15.0%
!!! AATTGGTACATTTTATTTTA+TGG - chr3.1:85735600-85735619 None:intergenic 15.0%
!!! AATTTAACTTATTATGTGTT+TGG + chr3.1:85738156-85738175 MS.gene014786:intron 15.0%
!!! ACTTTTTTTATATTATCCAA+AGG - chr3.1:85736412-85736431 None:intergenic 15.0%
!!! CTTTTTTTATATTATCCAAA+GGG - chr3.1:85736411-85736430 None:intergenic 15.0%
!!! GTAATGAAAATTTTATGTTT+TGG - chr3.1:85735707-85735726 None:intergenic 15.0%
!!! TAAGTACTATTTTTTTGTAA+TGG + chr3.1:85737496-85737515 MS.gene014786:intron 15.0%
!! ATAAGTTAAATTGTAGATAG+TGG - chr3.1:85738148-85738167 None:intergenic 20.0%
!! ATCAATATCACCATATAATT+AGG + chr3.1:85735331-85735350 MS.gene014786:intron 20.0%
!! GATAAAATATCTTAGAAGTT+TGG + chr3.1:85736463-85736482 MS.gene014786:intron 20.0%
!! TATGATAGAATAGAACATTA+TGG + chr3.1:85735414-85735433 MS.gene014786:intron 20.0%
!! TATTGAAATAAACCTTTGTT+TGG - chr3.1:85736308-85736327 None:intergenic 20.0%
!! TCTATTCTTAGTACAAAAAT+AGG - chr3.1:85736908-85736927 None:intergenic 20.0%
!!! AAAACATTGATGATAAGTTT+TGG + chr3.1:85736951-85736970 MS.gene014786:intron 20.0%
!!! AAATCTTTCTGATAGTTTTT+AGG - chr3.1:85735364-85735383 None:intergenic 20.0%
!!! AAGATTTGAAATTAATGAGT+TGG + chr3.1:85735377-85735396 MS.gene014786:intron 20.0%
!!! ACTAGTATAAAACATGTTTT+AGG + chr3.1:85736345-85736364 MS.gene014786:intron 20.0%
!!! CATAGCTTTATTGAAAAAAA+AGG + chr3.1:85739415-85739434 MS.gene014786:intron 20.0%
!!! CTTTTTTTTCAATAAAGCTA+TGG - chr3.1:85739417-85739436 None:intergenic 20.0%
!!! TAAACTTTATCTTGTTATAC+AGG + chr3.1:85738445-85738464 MS.gene014786:intron 20.0%
! AAAAGAAGAGGTAGTAAAAA+TGG + chr3.1:85737917-85737936 MS.gene014786:CDS 25.0%
! AAATTGTAGAATCTCATCTT+AGG + chr3.1:85735784-85735803 MS.gene014786:intron 25.0%
! AATAGATTTGCCTTCAAATT+TGG + chr3.1:85735642-85735661 MS.gene014786:intron 25.0%
! ACTATCATTTCCTAATGATA+TGG - chr3.1:85735501-85735520 None:intergenic 25.0%
! ACTTCAACAAACTGTAATTA+AGG - chr3.1:85737288-85737307 None:intergenic 25.0%
! AGAATTCTTTGATAAGGTTA+TGG - chr3.1:85737152-85737171 None:intergenic 25.0%
! AGACATCGATAAAAAGTTAA+AGG + chr3.1:85736580-85736599 MS.gene014786:CDS 25.0%
! AGTTAAAGGATTCTCAAATT+TGG + chr3.1:85736594-85736613 MS.gene014786:CDS 25.0%
! ATAGATTTGCCTTCAAATTT+GGG + chr3.1:85735643-85735662 MS.gene014786:intron 25.0%
! ATAGGATATATACAATGTGA+TGG + chr3.1:85737208-85737227 MS.gene014786:intron 25.0%
! ATATTGGGAAAAAACATACA+TGG - chr3.1:85737790-85737809 None:intergenic 25.0%
! ATGAATTTCGTGACAAAATT+GGG - chr3.1:85735299-85735318 None:intergenic 25.0%
! CAAAAACATAGTTGAATGAT+AGG + chr3.1:85737190-85737209 MS.gene014786:intron 25.0%
! CTGTAAAATGGATAACTAAT+CGG - chr3.1:85736012-85736031 None:intergenic 25.0%
! GTACAAAAATAGGATTACTT+TGG - chr3.1:85736898-85736917 None:intergenic 25.0%
! TAAAATGTACCAATTGAACT+TGG + chr3.1:85735605-85735624 MS.gene014786:intron 25.0%
! TAATACATACACAAAAGAAG+AGG + chr3.1:85737905-85737924 MS.gene014786:CDS 25.0%
! TAGATGAGAATTCTTTGATA+AGG - chr3.1:85737158-85737177 None:intergenic 25.0%
! TCCAAATAGTGCTTATAAAT+AGG + chr3.1:85739119-85739138 MS.gene014786:intron 25.0%
! TCCTATTTATAAGCACTATT+TGG - chr3.1:85739123-85739142 None:intergenic 25.0%
! TGAGAAATATAAACATGAGA+AGG + chr3.1:85738816-85738835 MS.gene014786:CDS 25.0%
! TGTCAAAGATGCTTATAAAA+AGG - chr3.1:85738926-85738945 None:intergenic 25.0%
! TTGATCTATTATTGTCTTTC+AGG + chr3.1:85738073-85738092 MS.gene014786:intron 25.0%
!! AACTTTGTTGTATATATCAG+GGG - chr3.1:85736630-85736649 None:intergenic 25.0%
!! CATAAATATGATTTGTGAGA+AGG + chr3.1:85736529-85736548 MS.gene014786:CDS 25.0%
!! GAACTTTGTTGTATATATCA+GGG - chr3.1:85736631-85736650 None:intergenic 25.0%
!! TAAAGAGAAAAGTAGCATTT+TGG - chr3.1:85737683-85737702 None:intergenic 25.0%
!! TAATGAGTTGGACTAAAATA+TGG + chr3.1:85735389-85735408 MS.gene014786:intron 25.0%
!! TCTTTTTGAACTATGAACTA+AGG + chr3.1:85737574-85737593 MS.gene014786:intron 25.0%
!! TGTTAAACAATCCAATTTTC+AGG + chr3.1:85735266-85735285 MS.gene014786:CDS 25.0%
!! TTTGTTATCACCATATCATT+AGG + chr3.1:85735488-85735507 MS.gene014786:intron 25.0%
!! TTTTCAATAAAGCTATGGAT+AGG - chr3.1:85739412-85739431 None:intergenic 25.0%
!!! CAACTATGTTTTTGATTGAA+AGG - chr3.1:85737184-85737203 None:intergenic 25.0%
!!! TGTTTTTTCCCAATATCATT+CGG + chr3.1:85737794-85737813 MS.gene014786:intron 25.0%
!!! TTAGCTTTGTGTTTTTCTTT+TGG - chr3.1:85736049-85736068 None:intergenic 25.0%
AACATTGGTCAACTGAAAAA+AGG - chr3.1:85738862-85738881 None:intergenic 30.0%
AAGAATAGAGCAGAATCATT+AGG + chr3.1:85736919-85736938 MS.gene014786:intron 30.0%
AAGATTGTCCAATAGTTAAG+AGG + chr3.1:85735861-85735880 MS.gene014786:intron 30.0%
ACTATGAACTAAGGATATCT+AGG + chr3.1:85737583-85737602 MS.gene014786:intron 30.0%
ACTTACATACCCAAATTTGA+AGG - chr3.1:85735655-85735674 None:intergenic 30.0%
AGAATTGTCTACCATAAAGA+TGG + chr3.1:85736130-85736149 MS.gene014786:CDS 30.0%
AGACAACATGACAGTAATTA+TGG - chr3.1:85736492-85736511 None:intergenic 30.0%
AGGTCTTCTTCCTAATTATA+TGG - chr3.1:85735344-85735363 None:intergenic 30.0%
ATCTTAGACCGAATGATATT+GGG - chr3.1:85737805-85737824 None:intergenic 30.0%
CAAAAGATGTTTCCTCTAAA+GGG - chr3.1:85739348-85739367 None:intergenic 30.0%
CACTCAATAATTGAGAATGT+TGG - chr3.1:85739194-85739213 None:intergenic 30.0%
CATGAATTTCGTGACAAAAT+TGG - chr3.1:85735300-85735319 None:intergenic 30.0%
GATTGATCTATCTAGGTAAT+TGG + chr3.1:85735547-85735566 MS.gene014786:intron 30.0%
GGTTATAGTTGCATTTGAAA+TGG + chr3.1:85737257-85737276 MS.gene014786:intron 30.0%
TAACTATCACCAAATGCATT+CGG - chr3.1:85737741-85737760 None:intergenic 30.0%
TACAACTCTTTATGATGATC+AGG + chr3.1:85737236-85737255 MS.gene014786:intron 30.0%
TAGGAACAGAGATAGTATAT+AGG + chr3.1:85739138-85739157 MS.gene014786:intron 30.0%
TATATTTCTCACGTATAGCA+TGG - chr3.1:85738807-85738826 None:intergenic 30.0%
TCAATGTAAGCAAGTATTCT+AGG + chr3.1:85736798-85736817 MS.gene014786:intron 30.0%
TCATTTAATCCGAATGCATT+TGG + chr3.1:85737729-85737748 MS.gene014786:intron 30.0%
TGAAAGATGACTTACATTCA+GGG + chr3.1:85739083-85739102 MS.gene014786:intron 30.0%
TGACATTGCAATTTAGCATA+TGG - chr3.1:85736380-85736399 None:intergenic 30.0%
TGATAAGGTTATGGACAAAA+AGG - chr3.1:85737143-85737162 None:intergenic 30.0%
TGGGATTTATACCTGAAAAT+TGG - chr3.1:85735280-85735299 None:intergenic 30.0%
TGTTTAACACGTTTATCATG+TGG - chr3.1:85735255-85735274 None:intergenic 30.0%
TTGAAAGATGACTTACATTC+AGG + chr3.1:85739082-85739101 MS.gene014786:intron 30.0%
! AATAAACCTTTGTTTGGACT+TGG - chr3.1:85736302-85736321 None:intergenic 30.0%
! AATATGATTTGTGAGAAGGT+AGG + chr3.1:85736533-85736552 MS.gene014786:CDS 30.0%
! CGAACTTTGTTGTATATATC+AGG - chr3.1:85736632-85736651 None:intergenic 30.0%
! CTTTTTATCGATGTCTACAA+AGG - chr3.1:85736576-85736595 None:intergenic 30.0%
! TACATACCTGAGAAATGTTT+TGG - chr3.1:85737991-85738010 None:intergenic 30.0%
! TTATCTTTCTAGTGAGTTAG+TGG - chr3.1:85736448-85736467 None:intergenic 30.0%
! TTATTATGTGTTTGGTTTCG+TGG + chr3.1:85738164-85738183 MS.gene014786:intron 30.0%
! TTTCTTTTGGTAAACTCCTT+TGG - chr3.1:85736036-85736055 None:intergenic 30.0%
!! AAGCTATAAATCCTAGCTTT+TGG - chr3.1:85738297-85738316 None:intergenic 30.0%
!! ATGGATTTTGACATGTTTGA+TGG + chr3.1:85738219-85738238 MS.gene014786:intron 30.0%
!! CGATTAGTTATCCATTTTAC+AGG + chr3.1:85736010-85736029 MS.gene014786:intron 30.0%
!! CTATGTTTTTGATTGAAAGG+CGG - chr3.1:85737181-85737200 None:intergenic 30.0%
!! GACTAGTGGATTTAAAACAT+TGG - chr3.1:85738877-85738896 None:intergenic 30.0%
!! TTTTGACTCTACCATCTTTA+TGG - chr3.1:85736144-85736163 None:intergenic 30.0%
!!! CTATTTTTTTGTAATGGTCC+TGG + chr3.1:85737502-85737521 MS.gene014786:intron 30.0%
AACATGGTCACTTATGTTGT+TGG - chr3.1:85736219-85736238 None:intergenic 35.0%
AAGACCATCAACCAATTACA+TGG + chr3.1:85736996-85737015 MS.gene014786:CDS 35.0%
AATGAATTACGGACAAACCT+CGG - chr3.1:85736660-85736679 None:intergenic 35.0%
AATGTCATAAGATTGCCCTT+TGG + chr3.1:85736393-85736412 MS.gene014786:intron 35.0%
ACAAGAGGATGTTAAAGAGA+AGG + chr3.1:85736100-85736119 MS.gene014786:CDS 35.0%
ACATGCAGATTGATCTATCT+AGG + chr3.1:85735540-85735559 MS.gene014786:intron 35.0%
ACATTCTTGCATTGAAAGTG+TGG - chr3.1:85736252-85736271 None:intergenic 35.0%
ACTCAGAATTACCAGATCAA+GGG + chr3.1:85735068-85735087 MS.gene014786:CDS 35.0%
AGAATTCTAACTCTGAGCAA+CGG - chr3.1:85737541-85737560 None:intergenic 35.0%
AGAGGTAGTAAAAATGGAGA+AGG + chr3.1:85737923-85737942 MS.gene014786:CDS 35.0%
AGTGATTCTAACCAAAAGCT+AGG + chr3.1:85738283-85738302 MS.gene014786:intron 35.0%
AGTTGTATTGTACCCTTTAG+AGG + chr3.1:85739333-85739352 MS.gene014786:intron 35.0%
ATATATGCAGACTACAACTC+TGG + chr3.1:85738693-85738712 MS.gene014786:intron 35.0%
ATTATGGCGTAATTTGATCC+TGG + chr3.1:85735430-85735449 MS.gene014786:intron 35.0%
CAAGTTTGATTCAGAAACAC+AGG + chr3.1:85737434-85737453 MS.gene014786:CDS 35.0%
CATCTTAGACCGAATGATAT+TGG - chr3.1:85737806-85737825 None:intergenic 35.0%
CTAACCTACTCTCTTTACTA+GGG - chr3.1:85735837-85735856 None:intergenic 35.0%
GATCTGCAACTTAATACCAA+AGG + chr3.1:85738772-85738791 MS.gene014786:CDS 35.0%
GCAAAAGATGTTTCCTCTAA+AGG - chr3.1:85739349-85739368 None:intergenic 35.0%
TAGTCAACATTTCATACCCA+TGG - chr3.1:85738614-85738633 None:intergenic 35.0%
TATTCCTCAGAAACCTGAAA+AGG - chr3.1:85737355-85737374 None:intergenic 35.0%
TCAGAAACCTGAAAAGGAAT+AGG - chr3.1:85737349-85737368 None:intergenic 35.0%
TCTAACCTACTCTCTTTACT+AGG - chr3.1:85735838-85735857 None:intergenic 35.0%
TCTCTTCACCTCTTAACTAT+TGG - chr3.1:85735872-85735891 None:intergenic 35.0%
TCTGATTGAGGTTCATAAAC+CGG + chr3.1:85739370-85739389 MS.gene014786:intron 35.0%
TGCAAAATGAAATATGCTCC+TGG - chr3.1:85736828-85736847 None:intergenic 35.0%
TTACTGTGAACCTCATTGAT+CGG + chr3.1:85737401-85737420 MS.gene014786:CDS 35.0%
TTCTCCATGTAATTGGTTGA+TGG - chr3.1:85737003-85737022 None:intergenic 35.0%
TTGGACATACAATGTTCAGT+TGG - chr3.1:85736200-85736219 None:intergenic 35.0%
TTGGTTAGAATCACTTCTTG+AGG - chr3.1:85738278-85738297 None:intergenic 35.0%
TTGTAGAATCTCATCTTAGG+TGG + chr3.1:85735787-85735806 MS.gene014786:intron 35.0%
TTTGCTAGACCAAGTTCAAT+TGG - chr3.1:85735617-85735636 None:intergenic 35.0%
! ACATCTTTTGCATCTGATTG+AGG + chr3.1:85739358-85739377 MS.gene014786:intron 35.0%
! AGATGCACTTCTTTTCTTCA+TGG + chr3.1:85737821-85737840 MS.gene014786:intron 35.0%
! CTCAGAAGAAACAACCTTTT+TGG - chr3.1:85735148-85735167 None:intergenic 35.0%
! TCTAAAGGGTACAATACAAC+TGG - chr3.1:85739334-85739353 None:intergenic 35.0%
! TTACCATCAAGCTTTTGTTG+TGG + chr3.1:85737308-85737327 MS.gene014786:intron 35.0%
! TTATCCATTTTACAGGCCAA+AGG + chr3.1:85736017-85736036 MS.gene014786:intron 35.0%
! TTGTGCTGATGAAACTTCAA+TGG - chr3.1:85736084-85736103 None:intergenic 35.0%
!! AAGTGGTTCTAGACACAAAA+TGG + chr3.1:85738200-85738219 MS.gene014786:intron 35.0%
!! AATTCTGATTGATTGGCTTG+TGG + chr3.1:85737056-85737075 MS.gene014786:CDS 35.0%
!! AGGACAGCATATTATTTTGC+CGG - chr3.1:85739392-85739411 None:intergenic 35.0%
!! CTGGATTATTTTATGCTGAC+AGG + chr3.1:85738402-85738421 MS.gene014786:intron 35.0%
!! TTTGTGTCTAGAACCACTTT+TGG - chr3.1:85738199-85738218 None:intergenic 35.0%
!! TTTTGTTGTGGCTTTGCTAA+AGG + chr3.1:85737320-85737339 MS.gene014786:intron 35.0%
!!! AAGCTTTTTTCCACTAAGTG+GGG - chr3.1:85735463-85735482 None:intergenic 35.0%
!!! CAAGCTTTTTTCCACTAAGT+GGG - chr3.1:85735464-85735483 None:intergenic 35.0%
!!! CTGAGAAATGTTTTGGTTGT+GGG - chr3.1:85737984-85738003 None:intergenic 35.0%
!!! TATTCCTTTTCAGGTTTCTG+AGG + chr3.1:85737348-85737367 MS.gene014786:intron 35.0%
AAAACCAGTTGTTCTTGCAC+TGG + chr3.1:85738747-85738766 MS.gene014786:CDS 40.0%
AACCAAAGTTACTGCAGCAA+TGG - chr3.1:85736171-85736190 None:intergenic 40.0%
AACGGGAACTTATGTTAACC+AGG - chr3.1:85737523-85737542 None:intergenic 40.0%
AACTCCTTTGGCCTGTAAAA+TGG - chr3.1:85736024-85736043 None:intergenic 40.0%
AAGAGCAACAGCTTCCAAAA+AGG + chr3.1:85735131-85735150 MS.gene014786:CDS 40.0%
AAGCAAAATTCTTCCACTCG+AGG - chr3.1:85737876-85737895 None:intergenic 40.0%
AAGCCACAACAAAAGCTTGA+TGG - chr3.1:85737314-85737333 None:intergenic 40.0%
AAGTCAGCTGAAATTGCTAG+AGG + chr3.1:85735671-85735690 MS.gene014786:intron 40.0%
AATTACCAGATCAAGGGCAA+AGG + chr3.1:85735074-85735093 MS.gene014786:CDS 40.0%
ACAGTAAACTGAGGATCGAA+AGG - chr3.1:85737642-85737661 None:intergenic 40.0%
AGCAGCACAATCTTCTTACA+AGG + chr3.1:85738107-85738126 MS.gene014786:CDS 40.0%
AGTCAGCTGAAATTGCTAGA+GGG + chr3.1:85735672-85735691 MS.gene014786:intron 40.0%
ATCATCTCCACAGTAAACTG+AGG - chr3.1:85737651-85737670 None:intergenic 40.0%
ATGCAAGAATGTGTGAACTC+TGG + chr3.1:85736260-85736279 MS.gene014786:CDS 40.0%
ATGTTCCTCACCGTAAAAGA+AGG + chr3.1:85735193-85735212 MS.gene014786:CDS 40.0%
CACTCAGAATTACCAGATCA+AGG + chr3.1:85735067-85735086 MS.gene014786:CDS 40.0%
CAGATAACTGAAAACGCAGA+AGG - chr3.1:85737959-85737978 None:intergenic 40.0%
CATTGCAAAATCAAACACGC+TGG + chr3.1:85738383-85738402 MS.gene014786:intron 40.0%
CCACAACCAAAACATTTCTC+AGG + chr3.1:85737982-85738001 MS.gene014786:CDS 40.0%
CCACTTAGTGGAAAAAAGCT+TGG + chr3.1:85735462-85735481 MS.gene014786:intron 40.0%
CTGCAACTTCTCCATGTAAT+TGG - chr3.1:85737010-85737029 None:intergenic 40.0%
CTTGATCTGGTAATTCTGAG+TGG - chr3.1:85735069-85735088 None:intergenic 40.0%
GAATTCTAACTCTGAGCAAC+GGG - chr3.1:85737540-85737559 None:intergenic 40.0%
GATCAATGAGGTTCACAGTA+AGG - chr3.1:85737402-85737421 None:intergenic 40.0%
GTGGTAGAGATAACCAAAAG+TGG + chr3.1:85738183-85738202 MS.gene014786:intron 40.0%
TATCGATGTCTACAAAGGTC+AGG - chr3.1:85736571-85736590 None:intergenic 40.0%
TGAAGTTTCATCAGCACAAG+AGG + chr3.1:85736085-85736104 MS.gene014786:CDS 40.0%
TGCGTGGAATTCTGATTGAT+TGG + chr3.1:85737049-85737068 MS.gene014786:CDS 40.0%
TGCTTCATGTGACAGTTCAA+TGG + chr3.1:85739467-85739486 MS.gene014786:intron 40.0%
TGTTCCTCACCGTAAAAGAA+GGG + chr3.1:85735194-85735213 MS.gene014786:CDS 40.0%
TTGAGAGAAACCGATCAATG+AGG - chr3.1:85737414-85737433 None:intergenic 40.0%
TTTCGATCCTCAGTTTACTG+TGG + chr3.1:85737641-85737660 MS.gene014786:intron 40.0%
! AGATCAAGGGCAAAGGTTTT+GGG + chr3.1:85735081-85735100 MS.gene014786:CDS 40.0%
! GCTCTGCTAAATAATTTGCC+AGG - chr3.1:85738493-85738512 None:intergenic 40.0%
! GGTTTCTGAGGAATATAAGC+TGG + chr3.1:85737360-85737379 MS.gene014786:intron 40.0%
! TGTAAGAAGATTGTGCTGCT+TGG - chr3.1:85738107-85738126 None:intergenic 40.0%
! TTCCCTTCATTTTCCGAAGA+GGG - chr3.1:85735111-85735130 None:intergenic 40.0%
! TTTCCCTTCATTTTCCGAAG+AGG - chr3.1:85735112-85735131 None:intergenic 40.0%
!! AAGGTGTCCTATTCCTTTTC+AGG + chr3.1:85737339-85737358 MS.gene014786:intron 40.0%
!! ACAGTAAGGTAAAGAGTGTC+TGG - chr3.1:85737388-85737407 None:intergenic 40.0%
!! TAGCTCTGAAGCTTTGTAGT+TGG - chr3.1:85738728-85738747 None:intergenic 40.0%
!! TGCTTATAAAAAGGCACCGA+TGG - chr3.1:85738917-85738936 None:intergenic 40.0%
!! TGGAGAAGTACTTGTACACA+CGG - chr3.1:85739314-85739333 None:intergenic 40.0%
!!! CCAAGCTTTTTTCCACTAAG+TGG - chr3.1:85735465-85735484 None:intergenic 40.0%
!!! CCTGAGAAATGTTTTGGTTG+TGG - chr3.1:85737985-85738004 None:intergenic 40.0%
!!! TTTTTTCCACTAAGTGGGGT+CGG - chr3.1:85735459-85735478 None:intergenic 40.0%
ACAGTTTCTACCTTCTCGTG+TGG + chr3.1:85738538-85738557 MS.gene014786:CDS 45.0%
ACCTCTCCAAGTCCAAACAA+AGG + chr3.1:85736293-85736312 MS.gene014786:CDS 45.0%
AGCATGGAGAGAACAACCTT+TGG - chr3.1:85738791-85738810 None:intergenic 45.0%
AGGAATTCCAGTTCAGCAAG+AGG - chr3.1:85738473-85738492 None:intergenic 45.0%
ATCAGAATTCCACGCATGCT+TGG - chr3.1:85737045-85737064 None:intergenic 45.0%
CAAAACCTTTGCCCTTGATC+TGG - chr3.1:85735082-85735101 None:intergenic 45.0%
CAACCACTCAGAACATCCAT+GGG + chr3.1:85738595-85738614 MS.gene014786:CDS 45.0%
CACCATTGCTGCAGTAACTT+TGG + chr3.1:85736166-85736185 MS.gene014786:CDS 45.0%
CACCGAAAATGCTACTCCAT+CGG + chr3.1:85738898-85738917 MS.gene014786:intron 45.0%
CATGTGACAGTTCAATGGTG+TGG + chr3.1:85739472-85739491 MS.gene014786:intron 45.0%
GACCCTCTTCGGAAAATGAA+GGG + chr3.1:85735106-85735125 MS.gene014786:CDS 45.0%
GAGACCCTAGTAAAGAGAGT+AGG + chr3.1:85735830-85735849 MS.gene014786:intron 45.0%
GATATTTCTCCAAGCATGCG+TGG + chr3.1:85737033-85737052 MS.gene014786:CDS 45.0%
GGCAAAACTGTCTCCAAAAC+CGG + chr3.1:85739493-85739512 MS.gene014786:CDS 45.0%
GTCAGCTGAAATTGCTAGAG+GGG + chr3.1:85735673-85735692 MS.gene014786:intron 45.0%
GTGTGGTGTCTGTCATAACA+TGG - chr3.1:85736235-85736254 None:intergenic 45.0%
TCAACCACTCAGAACATCCA+TGG + chr3.1:85738594-85738613 MS.gene014786:CDS 45.0%
TCTTCCAGTGCAAGAACAAC+TGG - chr3.1:85738754-85738773 None:intergenic 45.0%
TCTTGCTGAACTGGAATTCC+TGG + chr3.1:85738472-85738491 MS.gene014786:CDS 45.0%
TGCAAGTAACACCAAGCAAC+TGG - chr3.1:85737462-85737481 None:intergenic 45.0%
TTAGGTGGTAGAGACATGTG+TGG + chr3.1:85735802-85735821 MS.gene014786:intron 45.0%
! ACCTTTGTTTGGACTTGGAG+AGG - chr3.1:85736297-85736316 None:intergenic 45.0%
! ATACCCATGGATGTTCTGAG+TGG - chr3.1:85738601-85738620 None:intergenic 45.0%
! ATGGATGTTCTGAGTGGTTG+AGG - chr3.1:85738595-85738614 None:intergenic 45.0%
! CACCGATGGAGTAGCATTTT+CGG - chr3.1:85738903-85738922 None:intergenic 45.0%
! CAGATCAAGGGCAAAGGTTT+TGG + chr3.1:85735080-85735099 MS.gene014786:CDS 45.0%
! CTTTTACGGTGAGGAACATC+AGG - chr3.1:85735192-85735211 None:intergenic 45.0%
! TAAGCCCTGCCCTTCTTTTA+CGG - chr3.1:85735206-85735225 None:intergenic 45.0%
! TGGATGTTCTGAGTGGTTGA+GGG - chr3.1:85738594-85738613 None:intergenic 45.0%
!! AGCATTTTCGGTGTGACTAG+TGG - chr3.1:85738891-85738910 None:intergenic 45.0%
!! GCAAGTATTCTAGGATAGCC+AGG + chr3.1:85736807-85736826 MS.gene014786:intron 45.0%
!! TCTGATTGATTGGCTTGTGG+AGG + chr3.1:85737059-85737078 MS.gene014786:CDS 45.0%
!! ATTATTATTACTTTATAATA+GGG + chr3.1:85736751-85736770 MS.gene014786:intron 5.0%
!! TATTATTATTACTTTATAAT+AGG + chr3.1:85736750-85736769 MS.gene014786:intron 5.0%
AAACACAGGCTCCAGTTGCT+TGG + chr3.1:85737448-85737467 MS.gene014786:CDS 50.0%
ACAGGTTCCTCTTGCTGAAC+TGG + chr3.1:85738463-85738482 MS.gene014786:intron 50.0%
CAACAAAGTTCGAGTCACCG+AGG + chr3.1:85736640-85736659 MS.gene014786:CDS 50.0%
CTCACCGTAAAAGAAGGGCA+GGG + chr3.1:85735199-85735218 MS.gene014786:CDS 50.0%
CTGCTGTATTCCTTGCCAGA+TGG + chr3.1:85738567-85738586 MS.gene014786:CDS 50.0%
GAGTGGACGCTCTTCATCTT+TGG - chr3.1:85735052-85735071 None:intergenic 50.0%
GGACCCTCTTCGGAAAATGA+AGG + chr3.1:85735105-85735124 MS.gene014786:CDS 50.0%
TTGTGAGAAGGTAGGAGCCT+CGG + chr3.1:85736541-85736560 MS.gene014786:CDS 50.0%
!!! AACAGTGACTGCACCGGTTT+TGG - chr3.1:85739509-85739528 None:intergenic 50.0%
!!! TCAAGGGCAAAGGTTTTGGG+AGG + chr3.1:85735084-85735103 MS.gene014786:CDS 50.0%
AGAGATGTGTGCTCCTCGAG+TGG + chr3.1:85737860-85737879 MS.gene014786:CDS 55.0%
CCTCACCGTAAAAGAAGGGC+AGG + chr3.1:85735198-85735217 MS.gene014786:CDS 55.0%
GCTTGTGGAGGTCAGTCTTG+TGG + chr3.1:85737071-85737090 MS.gene014786:intron 55.0%
TACAAAGGTCAGGCGATCCG+AGG - chr3.1:85736561-85736580 None:intergenic 55.0%
TGAGTGGTTGAGGGTCCATC+TGG - chr3.1:85738585-85738604 None:intergenic 55.0%
! CCTGCCCTTCTTTTACGGTG+AGG - chr3.1:85735201-85735220 None:intergenic 55.0%
! GGAGGTCAGTCTTGTGGCAT+TGG + chr3.1:85737077-85737096 MS.gene014786:intron 55.0%
!!! GGTTTTGGGAGGACCCTCTT+CGG + chr3.1:85735095-85735114 MS.gene014786:CDS 55.0%
ACCGGTGCAGTCACTGTTCC+AGG + chr3.1:85739511-85739530 MS.gene014786:CDS 60.0%
ACTAAGTGGGGTCGGCTACC+AGG - chr3.1:85735451-85735470 None:intergenic 60.0%
GCAGAAGCAGCCACACGAGA+AGG - chr3.1:85738551-85738570 None:intergenic 60.0%
GCCTGGAACAGTGACTGCAC+CGG - chr3.1:85739515-85739534 None:intergenic 60.0%
GGTTGAGGGTCCATCTGGCA+AGG - chr3.1:85738580-85738599 None:intergenic 60.0%
TGGTAGCCGACCCCACTTAG+TGG + chr3.1:85735450-85735469 MS.gene014786:intron 60.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 85735021 85739544 85735021 ID=MS.gene014786
chr3.1 mRNA 85735021 85739544 85735021 ID=MS.gene014786.t1;Parent=MS.gene014786
chr3.1 exon 85735021 85735287 85735021 ID=MS.gene014786.t1.exon1;Parent=MS.gene014786.t1
chr3.1 CDS 85735021 85735287 85735021 ID=cds.MS.gene014786.t1;Parent=MS.gene014786.t1
chr3.1 exon 85736032 85736314 85736032 ID=MS.gene014786.t1.exon2;Parent=MS.gene014786.t1
chr3.1 CDS 85736032 85736314 85736032 ID=cds.MS.gene014786.t1;Parent=MS.gene014786.t1
chr3.1 exon 85736528 85736661 85736528 ID=MS.gene014786.t1.exon3;Parent=MS.gene014786.t1
chr3.1 CDS 85736528 85736661 85736528 ID=cds.MS.gene014786.t1;Parent=MS.gene014786.t1
chr3.1 exon 85736988 85737080 85736988 ID=MS.gene014786.t1.exon4;Parent=MS.gene014786.t1
chr3.1 CDS 85736988 85737080 85736988 ID=cds.MS.gene014786.t1;Parent=MS.gene014786.t1
chr3.1 exon 85737361 85737494 85737361 ID=MS.gene014786.t1.exon5;Parent=MS.gene014786.t1
chr3.1 CDS 85737361 85737494 85737361 ID=cds.MS.gene014786.t1;Parent=MS.gene014786.t1
chr3.1 exon 85737851 85738003 85737851 ID=MS.gene014786.t1.exon6;Parent=MS.gene014786.t1
chr3.1 CDS 85737851 85738003 85737851 ID=cds.MS.gene014786.t1;Parent=MS.gene014786.t1
chr3.1 exon 85738095 85738128 85738095 ID=MS.gene014786.t1.exon7;Parent=MS.gene014786.t1
chr3.1 CDS 85738095 85738128 85738095 ID=cds.MS.gene014786.t1;Parent=MS.gene014786.t1
chr3.1 exon 85738467 85738616 85738467 ID=MS.gene014786.t1.exon8;Parent=MS.gene014786.t1
chr3.1 CDS 85738467 85738616 85738467 ID=cds.MS.gene014786.t1;Parent=MS.gene014786.t1
chr3.1 exon 85738703 85738837 85738703 ID=MS.gene014786.t1.exon9;Parent=MS.gene014786.t1
chr3.1 CDS 85738703 85738837 85738703 ID=cds.MS.gene014786.t1;Parent=MS.gene014786.t1
chr3.1 exon 85739482 85739544 85739482 ID=MS.gene014786.t1.exon10;Parent=MS.gene014786.t1
chr3.1 CDS 85739482 85739544 85739482 ID=cds.MS.gene014786.t1;Parent=MS.gene014786.t1
Gene Sequence

>MS.gene014786

ATGAGTAAAGCAAATAGTACATTGTGTGCCAAAGATGAAGAGCGTCCACTCAGAATTACCAGATCAAGGGCAAAGGTTTTGGGAGGACCCTCTTCGGAAAATGAAGGGAAAAGAGCAACAGCTTCCAAAAAGGTTGTTTCTTCTGAGAATAAAACATGTGTTGCTGTTCCTGATGTTCCTCACCGTAAAAGAAGGGCAGGGCTTACTGATGTAACTAACATCACTGCAAAACCACATGATAAACGTGTTAAACAATCCAATTTTCAGGTATAAATCCCAATTTTGTCACGAAATTCATGTTTTAAATTATATCAATATCACCATATAATTAGGAAGAAGACCTAAAAACTATCAGAAAGATTTGAAATTAATGAGTTGGACTAAAATATGGTTTATGATAGAATAGAACATTATGGCGTAATTTGATCCTGGTAGCCGACCCCACTTAGTGGAAAAAAGCTTGGCTGTTTGTTATCACCATATCATTAGGAAATGATAGTTTTTTTTTTTTTTTTACAAACATGCAGATTGATCTATCTAGGTAATTGGAATGAAAAATTATTAGTGTCATATATGCCATAAAATAAAATGTACCAATTGAACTTGGTCTAGCAAACTCTTAATAGATTTGCCTTCAAATTTGGGTATGTAAGTCAGCTGAAATTGCTAGAGGGGTTTAGTACCCAAAACATAAAATTTTCATTACACAGCTATAAGACTTGCAATGTTATATGAAAGATACAAAATGCTCTCAATTTTATATAAATTGTAGAATCTCATCTTAGGTGGTAGAGACATGTGTGGAAGCAGAGACCCTAGTAAAGAGAGTAGGTTAGACGAAAGATTGTCCAATAGTTAAGAGGTGAAGAGAACTATTGCAAATAACTCACAACAGATCGAAATAGTTTGTTTTTAGACATGATTCACAATAGAACACTATGACATAATTGTTACTTAGTAGAAAACTTTGTTGCTGTGATTGTTAATGCCGATTAGTTATCCATTTTACAGGCCAAAGGAGTTTACCAAAAGAAAAACACAAAGCTAACTTCAGATGTCTCCATTGAAGTTTCATCAGCACAAGAGGATGTTAAAGAGAAGGTAGCTGAAGAATTGTCTACCATAAAGATGGTAGAGTCAAAAGACACCATTGCTGCAGTAACTTTGGTTGATGAACCAACTGAACATTGTATGTCCAACAACATAAGTGACCATGTTATGACAGACACCACACTTTCAATGCAAGAATGTGTGAACTCTGGTGAACTCGCTACCTCTCCAAGTCCAAACAAAGGTTTATTTCAATAATCTCATATATTTTACTACTAGTATAAAACATGTTTTAGGTATATAATACCATATGCTAAATTGCAATGTCATAAGATTGCCCTTTGGATAATATAAAAAAAGTTACTAGGTGTAAGCCACTAACTCACTAGAAAGATAAAATATCTTAGAAGTTTGGATACCATAATTACTGTCATGTTGTCTTGATTGTATTGTGCAGACATAAATATGATTTGTGAGAAGGTAGGAGCCTCGGATCGCCTGACCTTTGTAGACATCGATAAAAAGTTAAAGGATTCTCAAATTTGGAGTGCTTATGCCCCTGATATATACAACAAAGTTCGAGTCACCGAGGTTTGTCCGTAATTCATTATTAAACAATCTTATGCTGCACATCTCAACTGCTTCTGCTTTCTTCTTTGTCATAATCTGACTGCATTATTATTATTATTACTTTATAATAGGGTTCTTCAGTTTTAGAGTATAACTTTCAATGTAAGCAAGTATTCTAGGATAGCCAGGAGCATATTTCATTTTGCAATATTTTATATTATTATAATGTCAGTTTTGCTGCATAAGAGAACATTCCAAAGTAATCCTATTTTTGTACTAAGAATAGAGCAGAATCATTAGGTTCACTACAAAAACATTGATGATAAGTTTTGGTGAAATCTCTTCAGCTTGAGAAAAGACCATCAACCAATTACATGGAGAAGTTGCAGCAAGATATTTCTCCAAGCATGCGTGGAATTCTGATTGATTGGCTTGTGGAGGTCAGTCTTGTGGCATTGGCTTCGTGTACATTTATATATTTGAGCAATCTTTAGCTTTTCCTTTTTGTCCATAACCTTATCAAAGAATTCTCATCTACCGCCTTTCAATCAAAAACATAGTTGAATGATAGGATATATACAATGTGATGGATAACTACAACTCTTTATGATGATCAGGTTATAGTTGCATTTGAAATGGAGAATCCTTAATTACAGTTTGTTGAAGTTTACCATCAAGCTTTTGTTGTGGCTTTGCTAAAGGTGTCCTATTCCTTTTCAGGTTTCTGAGGAATATAAGCTGGTTCCAGACACTCTTTACCTTACTGTGAACCTCATTGATCGGTTTCTCTCAACAAGTTTGATTCAGAAACACAGGCTCCAGTTGCTTGGTGTTACTTGCATGTTCATTGCATCGTAAGTACTATTTTTTTGTAATGGTCCTGGTTAACATAAGTTCCCGTTGCTCAGAGTTAGAATTCTAGATGATATGTCTTCTTTTTGAACTATGAACTAAGGATATCTAGGCTTTCAAAATGATAAAGCAGATAATGTCAATCACCTTTCGATCCTCAGTTTACTGTGGAGATGATAATTATTTTCCAAAATGCTACTTTTCTCTTTAACTTGTATTTGTTGATTATTCATGAATCATTTAATCCGAATGCATTTGGTGATAGTTACAAGTGATTATCTATTATCTAAGATACCATGTATGTTTTTTCCCAATATCATTCGGTCTAAGATGCACTTCTTTTCTTCATGGCTTAAAGAAAATATGAAGAGATGTGTGCTCCTCGAGTGGAAGAATTTTGCTTCATCACAGATAATACATACACAAAAGAAGAGGTAGTAAAAATGGAGAAGGAAGTTTTAAACCTTCTGCGTTTTCAGTTATCTGTTCCCACAACCAAAACATTTCTCAGGTATGTAGTGTACTGTTTATTTATTAACACTTTGTTAGAAAATACTACTTAAAACTTCATTGAACTAAGTTGATCTATTATTGTCTTTCAGGAGATTCATCCAAGCAGCACAATCTTCTTACAAGGTACTATAGTTGTTATCCACTATCTACAATTTAACTTATTATGTGTTTGGTTTCGTGGTAGAGATAACCAAAAGTGGTTCTAGACACAAAATGGATTTTGACATGTTTGATGGATGTCAGTTGTAATTGATTTTTATTTTTTTTTGCCTCAAGAAGTGATTCTAACCAAAAGCTAGGATTTATAGCTTTTGACTCTAAATGTGATTTTTACATACAAATTTGCTGTTCAACTTACGTCTAGAATCGATTTTTGACATTGCAAAATCAAACACGCTGGATTATTTTATGCTGACAGGAAAAATGCAACTCAATGCGTTAAACTTTATCTTGTTATACAGGTTCCTCTTGCTGAACTGGAATTCCTGGCAAATTATTTAGCAGAGCTCGCTCTTGTTGAATACAGCTTCTTACAGTTTCTACCTTCTCGTGTGGCTGCTTCTGCTGTATTCCTTGCCAGATGGACCCTCAACCACTCAGAACATCCATGGGTATGAAATGTTGACTAGTATCAAGTTACCTTTGTTTAGAAGATATAAATAGAAATTTGAAGAGTCGCATGCATTTATATATGCAGACTACAACTCTGGAGCATTTTACCAACTACAAAGCTTCAGAGCTAAAACCAGTTGTTCTTGCACTGGAAGATCTGCAACTTAATACCAAAGGTTGTTCTCTCCATGCTATACGTGAGAAATATAAACATGAGAAGGTTAGAATAACAAACTCTTATCCTTTTTTCAGTTGACCAATGTTTTAAATCCACTAGTCACACCGAAAATGCTACTCCATCGGTGCCTTTTTATAAGCATCTTTGACACTTTTCACATATATTAAGAAAAGTTGATAGTGTGATTGATGTATATTCTGTGTATGACTATCACTAAATTGTCCATTATAATTAGTAGTATTAATTTGAGATATATTTTAAAAATAACAAAAATCTATCTAGTAGTTTGAAAGATGACTTACATTCAGGGACACTTTTTTCTCTCCAAATAGTGCTTATAAATAGGAACAGAGATAGTATATAGGAGCAGCAATAGCAATACACTCTTTTTAATTCCAACATTCTCAATTATTGAGTGAAATTCATGTAAGTTTCGTCATTTTAAAAATAAGTCTCGCATAAAGTGATGAGACACATGAATTTCACTAAAAGAGTAATGAAAAGAGAGTGCTAGACCGTGTGTACAAGTACTTCTCCAGTTGTATTGTACCCTTTAGAGGAAACATCTTTTGCATCTGATTGAGGTTCATAAACCGGCAAAATAATATGCTGTCCTATCCATAGCTTTATTGAAAAAAAAGGTATATACATAATTACACAAAATTGACTTTTGCTTCATGTGACAGTTCAATGGTGTGGCAAAACTGTCTCCAAAACCGGTGCAGTCACTGTTCCAGGCTCAAGTGTAA
Protein sequence

>MS.gene014786.t1

MSKANSTLCAKDEERPLRITRSRAKVLGGPSSENEGKRATASKKVVSSENKTCVAVPDVPHRKRRAGLTDVTNITAKPHDKRVKQSNFQAKGVYQKKNTKLTSDVSIEVSSAQEDVKEKVAEELSTIKMVESKDTIAAVTLVDEPTEHCMSNNISDHVMTDTTLSMQECVNSGELATSPSPNKDINMICEKVGASDRLTFVDIDKKLKDSQIWSAYAPDIYNKVRVTELEKRPSTNYMEKLQQDISPSMRGILIDWLVEVSEEYKLVPDTLYLTVNLIDRFLSTSLIQKHRLQLLGVTCMFIASKYEEMCAPRVEEFCFITDNTYTKEEVVKMEKEVLNLLRFQLSVPTTKTFLRRFIQAAQSSYKVPLAELEFLANYLAELALVEYSFLQFLPSRVAASAVFLARWTLNHSEHPWTTTLEHFTNYKASELKPVVLALEDLQLNTKGCSLHAIREKYKHEKFNGVAKLSPKPVQSLFQAQV