Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71260.t1 | CAB46083.1 | 97.9 | 484 | 10 | 0 | 1 | 484 | 1 | 484 | 9.60E-263 | 915.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71260.t1 | Q9C968 | 51.5 | 470 | 198 | 7 | 16 | 484 | 19 | 459 | 1.3e-114 | 414.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71260.t1 | Q9XGI0 | 97.9 | 484 | 10 | 0 | 1 | 484 | 1 | 484 | 6.9e-263 | 915.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049230 | MS.gene71260 | -0.807367 | 5.23E-50 | -1.69E-46 |
MS.gene049378 | MS.gene71260 | -0.813332 | 2.70E-51 | -1.69E-46 |
MS.gene050508 | MS.gene71260 | -0.805955 | 1.04E-49 | -1.69E-46 |
MS.gene050642 | MS.gene71260 | -0.8449 | 5.68E-59 | -1.69E-46 |
MS.gene051983 | MS.gene71260 | -0.830633 | 2.63E-55 | -1.69E-46 |
MS.gene052077 | MS.gene71260 | -0.830448 | 2.92E-55 | -1.69E-46 |
MS.gene052176 | MS.gene71260 | -0.824753 | 6.80E-54 | -1.69E-46 |
MS.gene052309 | MS.gene71260 | 0.803855 | 2.86E-49 | -1.69E-46 |
MS.gene052389 | MS.gene71260 | -0.825187 | 5.37E-54 | -1.69E-46 |
MS.gene054930 | MS.gene71260 | -0.814672 | 1.37E-51 | -1.69E-46 |
MS.gene055701 | MS.gene71260 | -0.861351 | 1.09E-63 | -1.69E-46 |
MS.gene055946 | MS.gene71260 | -0.80609 | 9.74E-50 | -1.69E-46 |
MS.gene056979 | MS.gene71260 | -0.822118 | 2.81E-53 | -1.69E-46 |
MS.gene057156 | MS.gene71260 | 0.851369 | 9.28E-61 | -1.69E-46 |
MS.gene058435 | MS.gene71260 | -0.817269 | 3.60E-52 | -1.69E-46 |
MS.gene059710 | MS.gene71260 | -0.833229 | 6.01E-56 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene23970 | MS.gene71260 | PPI |
MS.gene71260 | MS.gene89575 | PPI |
MS.gene021632 | MS.gene71260 | PPI |
MS.gene072954 | MS.gene71260 | PPI |
MS.gene038078 | MS.gene71260 | PPI |
MS.gene014786 | MS.gene71260 | PPI |
MS.gene072963 | MS.gene71260 | PPI |
MS.gene072956 | MS.gene71260 | PPI |
MS.gene067144 | MS.gene71260 | PPI |
MS.gene072952 | MS.gene71260 | PPI |
MS.gene71482 | MS.gene71260 | PPI |
MS.gene015942 | MS.gene71260 | PPI |
MS.gene036055 | MS.gene71260 | PPI |
MS.gene067143 | MS.gene71260 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71260.t1 | MTR_2g102520 | 92.990 | 485 | 27 | 2 | 1 | 484 | 1 | 479 | 0.0 | 926 |
MS.gene71260.t1 | MTR_2g102550 | 66.874 | 483 | 101 | 6 | 3 | 484 | 5 | 429 | 0.0 | 605 |
MS.gene71260.t1 | MTR_3g107970 | 47.658 | 491 | 216 | 12 | 8 | 484 | 11 | 474 | 4.86e-129 | 383 |
MS.gene71260.t1 | MTR_1g011470 | 59.247 | 292 | 117 | 2 | 193 | 484 | 133 | 422 | 8.04e-115 | 345 |
MS.gene71260.t1 | MTR_3g088415 | 52.098 | 286 | 131 | 3 | 191 | 472 | 207 | 490 | 6.44e-97 | 301 |
MS.gene71260.t1 | MTR_1g018680 | 51.119 | 268 | 128 | 2 | 212 | 477 | 82 | 348 | 1.30e-90 | 281 |
MS.gene71260.t1 | MTR_3g088405 | 45.520 | 279 | 151 | 1 | 200 | 477 | 222 | 500 | 9.06e-86 | 273 |
MS.gene71260.t1 | MTR_3g088415 | 52.991 | 234 | 107 | 1 | 191 | 421 | 207 | 440 | 1.19e-84 | 268 |
MS.gene71260.t1 | MTR_3g102520 | 44.561 | 285 | 154 | 3 | 203 | 484 | 73 | 356 | 1.82e-75 | 242 |
MS.gene71260.t1 | MTR_3g102530 | 44.912 | 285 | 153 | 3 | 203 | 484 | 66 | 349 | 5.32e-75 | 240 |
MS.gene71260.t1 | MTR_3g102510 | 45.255 | 274 | 148 | 2 | 212 | 484 | 65 | 337 | 4.83e-73 | 234 |
MS.gene71260.t1 | MTR_3g102560 | 47.860 | 257 | 126 | 4 | 226 | 480 | 69 | 319 | 1.16e-66 | 217 |
MS.gene71260.t1 | MTR_3g102540 | 48.047 | 256 | 122 | 5 | 225 | 477 | 13 | 260 | 3.20e-66 | 214 |
MS.gene71260.t1 | MTR_3g088415 | 55.249 | 181 | 78 | 1 | 191 | 368 | 207 | 387 | 9.31e-66 | 217 |
MS.gene71260.t1 | MTR_5g023790 | 38.351 | 279 | 162 | 6 | 195 | 472 | 146 | 415 | 5.42e-53 | 184 |
MS.gene71260.t1 | MTR_5g088980 | 38.909 | 275 | 157 | 8 | 205 | 477 | 148 | 413 | 9.98e-53 | 184 |
MS.gene71260.t1 | MTR_5g023790 | 41.152 | 243 | 134 | 5 | 195 | 436 | 146 | 380 | 2.12e-52 | 182 |
MS.gene71260.t1 | MTR_7g089080 | 36.333 | 300 | 170 | 8 | 200 | 483 | 177 | 471 | 7.34e-49 | 181 |
MS.gene71260.t1 | MTR_8g074000 | 36.803 | 269 | 161 | 5 | 205 | 472 | 159 | 419 | 1.66e-48 | 172 |
MS.gene71260.t1 | MTR_5g023790 | 43.258 | 178 | 98 | 3 | 195 | 371 | 146 | 321 | 5.69e-41 | 150 |
MS.gene71260.t1 | MTR_3g060770 | 31.004 | 229 | 142 | 7 | 254 | 472 | 60 | 282 | 7.94e-24 | 101 |
MS.gene71260.t1 | MTR_3g060410 | 32.812 | 192 | 120 | 5 | 250 | 436 | 131 | 318 | 1.59e-22 | 99.4 |
MS.gene71260.t1 | MTR_3g061680 | 31.441 | 229 | 140 | 9 | 254 | 472 | 50 | 271 | 3.36e-21 | 94.0 |
MS.gene71260.t1 | MTR_3g060820 | 29.694 | 229 | 144 | 8 | 254 | 472 | 50 | 271 | 9.93e-21 | 92.4 |
MS.gene71260.t1 | MTR_3g060400 | 29.185 | 233 | 148 | 8 | 250 | 472 | 52 | 277 | 1.04e-20 | 92.4 |
MS.gene71260.t1 | MTR_3g460990 | 29.185 | 233 | 148 | 8 | 250 | 472 | 52 | 277 | 1.04e-20 | 92.4 |
MS.gene71260.t1 | MTR_1g032850 | 35.870 | 184 | 101 | 6 | 241 | 419 | 364 | 535 | 4.20e-18 | 87.4 |
MS.gene71260.t1 | MTR_5g044040 | 39.706 | 68 | 41 | 0 | 276 | 343 | 7 | 74 | 1.58e-12 | 65.1 |
MS.gene71260.t1 | MTR_6g045270 | 27.313 | 227 | 142 | 8 | 255 | 472 | 75 | 287 | 5.53e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71260.t1 | AT1G80370 | 50.000 | 488 | 211 | 8 | 1 | 484 | 1 | 459 | 5.16e-152 | 441 |
MS.gene71260.t1 | AT1G15570 | 51.446 | 484 | 192 | 14 | 8 | 484 | 3 | 450 | 2.92e-148 | 431 |
MS.gene71260.t1 | AT5G11300 | 45.763 | 472 | 190 | 10 | 15 | 484 | 27 | 434 | 6.47e-129 | 381 |
MS.gene71260.t1 | AT5G25380 | 62.718 | 287 | 106 | 1 | 198 | 484 | 150 | 435 | 4.69e-126 | 374 |
MS.gene71260.t1 | AT5G25380 | 62.718 | 287 | 106 | 1 | 198 | 484 | 150 | 435 | 4.69e-126 | 374 |
MS.gene71260.t1 | AT5G25380 | 62.718 | 287 | 106 | 1 | 198 | 484 | 156 | 441 | 7.22e-126 | 374 |
MS.gene71260.t1 | AT5G25380 | 63.469 | 271 | 98 | 1 | 198 | 468 | 150 | 419 | 8.36e-121 | 360 |
MS.gene71260.t1 | AT5G11300 | 44.743 | 409 | 161 | 9 | 15 | 421 | 27 | 372 | 7.02e-104 | 317 |
MS.gene71260.t1 | AT1G44110 | 50.714 | 280 | 137 | 1 | 205 | 484 | 178 | 456 | 5.21e-96 | 298 |
MS.gene71260.t1 | AT5G43080 | 50.357 | 280 | 137 | 2 | 206 | 484 | 72 | 350 | 9.88e-96 | 293 |
MS.gene71260.t1 | AT1G47210 | 49.645 | 282 | 138 | 3 | 206 | 484 | 87 | 367 | 2.19e-95 | 293 |
MS.gene71260.t1 | AT5G43080 | 50.714 | 280 | 131 | 3 | 206 | 484 | 72 | 345 | 5.04e-94 | 289 |
MS.gene71260.t1 | AT1G77390 | 52.453 | 265 | 123 | 2 | 204 | 467 | 161 | 423 | 5.60e-92 | 287 |
MS.gene71260.t1 | AT1G47230 | 49.270 | 274 | 135 | 3 | 214 | 484 | 88 | 360 | 4.84e-91 | 282 |
MS.gene71260.t1 | AT1G47230 | 49.091 | 275 | 135 | 4 | 214 | 484 | 88 | 361 | 2.89e-89 | 277 |
MS.gene71260.t1 | AT1G47220 | 47.601 | 271 | 139 | 2 | 206 | 474 | 41 | 310 | 1.35e-84 | 264 |
MS.gene71260.t1 | AT5G06150 | 36.201 | 279 | 168 | 5 | 203 | 480 | 163 | 432 | 1.10e-49 | 176 |
MS.gene71260.t1 | AT1G20610 | 36.713 | 286 | 168 | 9 | 195 | 477 | 149 | 424 | 3.00e-48 | 172 |
MS.gene71260.t1 | AT1G76310 | 35.664 | 286 | 174 | 6 | 197 | 480 | 152 | 429 | 9.17e-47 | 168 |
MS.gene71260.t1 | AT3G11520 | 35.254 | 295 | 179 | 5 | 189 | 480 | 124 | 409 | 2.80e-46 | 166 |
MS.gene71260.t1 | AT4G37490 | 36.620 | 284 | 166 | 8 | 205 | 482 | 148 | 423 | 4.15e-46 | 166 |
MS.gene71260.t1 | AT1G76310 | 39.241 | 237 | 135 | 5 | 197 | 431 | 152 | 381 | 3.19e-45 | 162 |
MS.gene71260.t1 | AT3G11520 | 37.209 | 258 | 151 | 4 | 189 | 443 | 124 | 373 | 3.75e-45 | 162 |
MS.gene71260.t1 | AT2G26760 | 37.591 | 274 | 161 | 7 | 205 | 476 | 113 | 378 | 2.03e-44 | 160 |
MS.gene71260.t1 | AT2G17620 | 37.500 | 288 | 169 | 6 | 195 | 480 | 144 | 422 | 1.91e-43 | 159 |
MS.gene71260.t1 | AT4G35620 | 37.175 | 269 | 160 | 5 | 205 | 472 | 155 | 415 | 1.28e-41 | 154 |
MS.gene71260.t1 | AT1G76310 | 32.484 | 314 | 174 | 7 | 197 | 480 | 152 | 457 | 7.13e-41 | 152 |
MS.gene71260.t1 | AT1G16330 | 35.055 | 271 | 161 | 6 | 171 | 437 | 345 | 604 | 2.10e-40 | 154 |
MS.gene71260.t1 | AT4G35620 | 39.485 | 233 | 133 | 4 | 205 | 436 | 155 | 380 | 4.47e-39 | 146 |
MS.gene71260.t1 | AT1G47210 | 54.717 | 106 | 46 | 1 | 206 | 309 | 87 | 192 | 3.15e-35 | 130 |
MS.gene71260.t1 | AT1G76310 | 41.243 | 177 | 101 | 3 | 197 | 371 | 152 | 327 | 4.40e-35 | 134 |
MS.gene71260.t1 | AT5G06150 | 36.842 | 171 | 105 | 2 | 199 | 368 | 159 | 327 | 1.07e-33 | 130 |
MS.gene71260.t1 | AT1G20590 | 37.107 | 159 | 94 | 2 | 280 | 438 | 63 | 215 | 8.26e-28 | 112 |
MS.gene71260.t1 | AT1G14750 | 39.394 | 165 | 90 | 5 | 250 | 410 | 214 | 372 | 7.56e-20 | 92.0 |
MS.gene71260.t1 | AT1G14750 | 39.394 | 165 | 90 | 5 | 250 | 410 | 382 | 540 | 1.08e-19 | 92.4 |
MS.gene71260.t1 | AT1G14750 | 39.394 | 165 | 90 | 5 | 250 | 410 | 382 | 540 | 1.35e-19 | 92.4 |
MS.gene71260.t1 | AT1G14750 | 39.394 | 165 | 89 | 6 | 250 | 410 | 214 | 371 | 1.10e-18 | 88.6 |
MS.gene71260.t1 | AT1G34460 | 26.042 | 192 | 117 | 4 | 176 | 366 | 225 | 392 | 8.81e-17 | 83.2 |
MS.gene71260.t1 | AT1G34460 | 26.042 | 192 | 117 | 4 | 176 | 366 | 225 | 392 | 8.81e-17 | 83.2 |
MS.gene71260.t1 | AT1G34460 | 26.425 | 193 | 118 | 4 | 176 | 366 | 225 | 395 | 1.19e-16 | 82.8 |
MS.gene71260.t1 | AT1G34460 | 26.425 | 193 | 118 | 4 | 176 | 366 | 225 | 395 | 1.25e-16 | 82.8 |
MS.gene71260.t1 | AT1G34460 | 26.425 | 193 | 118 | 4 | 176 | 366 | 225 | 395 | 1.25e-16 | 82.8 |
MS.gene71260.t1 | AT1G34460 | 26.425 | 193 | 118 | 4 | 176 | 366 | 225 | 395 | 1.25e-16 | 82.8 |
MS.gene71260.t1 | AT1G34460 | 26.425 | 193 | 118 | 4 | 176 | 366 | 225 | 395 | 1.25e-16 | 82.8 |
MS.gene71260.t1 | AT1G34460 | 26.425 | 193 | 118 | 4 | 176 | 366 | 211 | 381 | 1.34e-16 | 82.4 |
MS.gene71260.t1 | AT1G34460 | 26.425 | 193 | 118 | 4 | 176 | 366 | 225 | 395 | 1.34e-16 | 82.8 |
Find 92 sgRNAs with CRISPR-Local
Find 164 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCAGAAATGTTACCTTTCT+TGG | 0.133114 | 4.2:+64066870 | None:intergenic |
CTTAAATCCAACTGAAATTC+AGG | 0.218558 | 4.2:-64067461 | MS.gene71260:intron |
TTAGATCATCAGAAGATTTC+AGG | 0.248087 | 4.2:-64067182 | MS.gene71260:CDS |
TTCTTGCGGATGGCGGTTAA+AGG | 0.248838 | 4.2:+64064932 | None:intergenic |
AACAATGTTTCAAGCAGTTT+TGG | 0.255031 | 4.2:+64064705 | None:intergenic |
TGCTTCTGATTCTGAGTTCC+TGG | 0.256521 | 4.2:+64067601 | None:intergenic |
AGGTAACATTTCTGAACTTT+TGG | 0.265548 | 4.2:-64066863 | MS.gene71260:CDS |
CTTAAACTTCCTTCCTTCTA+TGG | 0.274701 | 4.2:-64065206 | MS.gene71260:CDS |
TTTCAGGTGCTTAGATGATT+TGG | 0.298761 | 4.2:-64067166 | MS.gene71260:CDS |
TCCAAGCATGCGTGCGATAC+TGG | 0.334324 | 4.2:-64066475 | MS.gene71260:CDS |
TGTACTGTTTCCATGAAGTT+AGG | 0.339878 | 4.2:+64066510 | None:intergenic |
TGGTTGGAACTCATCCTAAA+AGG | 0.349846 | 4.2:+64067132 | None:intergenic |
CAAATCTGATGCTTTGTAAG+AGG | 0.356045 | 4.2:+64065009 | None:intergenic |
CCTGGTGCTACCTCCTTCAT+TGG | 0.361989 | 4.2:+64067619 | None:intergenic |
GAAACACCTGAGGAAAGTTT+TGG | 0.367596 | 4.2:+64065525 | None:intergenic |
GCGTCTATGTCAGCGACATC+TGG | 0.374347 | 4.2:+64066826 | None:intergenic |
TCACTGTATATCTCATTGAT+TGG | 0.374427 | 4.2:-64066125 | MS.gene71260:CDS |
TAGCATTGAGTTGGAGTACT+TGG | 0.388611 | 4.2:-64065269 | MS.gene71260:CDS |
GAAGATGCAGCGACCATAGA+AGG | 0.394096 | 4.2:+64065193 | None:intergenic |
GAACTAACACTGATGAACTA+TGG | 0.399485 | 4.2:-64065232 | MS.gene71260:CDS |
TGATTGACAGGTAGTAAAAC+TGG | 0.408227 | 4.2:-64065596 | MS.gene71260:intron |
AAGGCCTTATCCTAACTTCA+TGG | 0.409072 | 4.2:-64066520 | MS.gene71260:CDS |
CAAATTGTTGCAGCCAAGAA+AGG | 0.441666 | 4.2:-64066883 | MS.gene71260:CDS |
CCTTTGAGTTCTCAGAAGAA+AGG | 0.448840 | 4.2:-64067054 | MS.gene71260:intron |
ACCAGTATCGCACGCATGCT+TGG | 0.449229 | 4.2:+64066474 | None:intergenic |
GGAACCTCATTTGAAACATC+AGG | 0.452258 | 4.2:+64067270 | None:intergenic |
GCTGTGGCTTTAAGTACATC+TGG | 0.460174 | 4.2:-64067652 | MS.gene71260:CDS |
TCTTGCGGATGGCGGTTAAA+GGG | 0.462277 | 4.2:+64064933 | None:intergenic |
CTCAAAACCGGTGAGTTCAA+TGG | 0.463382 | 4.2:-64067214 | MS.gene71260:CDS |
GTTTCCATGAAGTTAGGATA+AGG | 0.469825 | 4.2:+64066516 | None:intergenic |
TTTGAAACATCAGGTTGAGC+AGG | 0.471682 | 4.2:+64067279 | None:intergenic |
AAGAGTGTCACTCTGAAAGC+TGG | 0.489355 | 4.2:-64067706 | MS.gene71260:CDS |
CGCATTTCCATTGAACTCAC+CGG | 0.493862 | 4.2:+64067207 | None:intergenic |
ATGTCTGCCAGGCTAAGAAA+AGG | 0.496711 | 4.2:-64067314 | MS.gene71260:intron |
AAGAGAGAGACTTCAGCTAC+TGG | 0.497350 | 4.2:-64066079 | MS.gene71260:CDS |
GAGGCATACTGTTCAAGAGT+TGG | 0.504331 | 4.2:+64065028 | None:intergenic |
TCAACCTGATGTTTCAAATG+AGG | 0.507462 | 4.2:-64067274 | MS.gene71260:CDS |
TGCGTGCGATACTGGTTGAT+TGG | 0.508489 | 4.2:-64066467 | MS.gene71260:CDS |
GAGCAGATATTCGAGATGTC+TGG | 0.508698 | 4.2:+64067079 | None:intergenic |
TATGCAACCTGAATTTCAGT+TGG | 0.513953 | 4.2:+64067454 | None:intergenic |
AATTCATGTTCAGGTTTCTG+AGG | 0.514222 | 4.2:-64066178 | MS.gene71260:intron |
GGTGCTACCTCCTTCATTGG+TGG | 0.514272 | 4.2:+64067622 | None:intergenic |
GGAGTACTTGGCAAATTACC+TGG | 0.519674 | 4.2:-64065257 | MS.gene71260:CDS |
ATTGTGGCGAAAATACAAAC+AGG | 0.527010 | 4.2:-64067489 | MS.gene71260:CDS |
AGCAAATAGTTGATATGAAG+AGG | 0.537833 | 4.2:+64065555 | None:intergenic |
TGGACAGTTACCACCAATGA+AGG | 0.540275 | 4.2:-64067632 | MS.gene71260:CDS |
CGAGCACGAGTCAATCGACT+TGG | 0.540414 | 4.2:+64067676 | None:intergenic |
GTTCATAGCTGACTCAAAAC+CGG | 0.542331 | 4.2:-64067226 | MS.gene71260:CDS |
TCATCAGTGTTAGTTCAGCC+AGG | 0.544691 | 4.2:+64065239 | None:intergenic |
TTGTGTGTACTTCTTGCGGA+TGG | 0.546451 | 4.2:+64064922 | None:intergenic |
GCAGAGGCCTAGCATTGAGT+TGG | 0.548505 | 4.2:-64065278 | MS.gene71260:intron |
CCAATGAAGGAGGTAGCACC+AGG | 0.548598 | 4.2:-64067619 | MS.gene71260:CDS |
CTACTACCAAAACTTTCCTC+AGG | 0.552988 | 4.2:-64065531 | MS.gene71260:intron |
ATTCATGTTCAGGTTTCTGA+GGG | 0.554200 | 4.2:-64066177 | MS.gene71260:intron |
ATTGTTTGTGCCACACTGGT+TGG | 0.556087 | 4.2:+64067116 | None:intergenic |
CTTCCGTGTTTCTTGCACGA+TGG | 0.556981 | 4.2:-64065174 | MS.gene71260:CDS |
TAGATCAGTCAAGCCACCCA+TGG | 0.558247 | 4.2:-64065147 | MS.gene71260:CDS |
GGTGGTAGCTCAGCAGCTGA+TGG | 0.562864 | 4.2:+64067249 | None:intergenic |
AAGTACTCCAACTCAATGCT+AGG | 0.564248 | 4.2:+64065271 | None:intergenic |
CATATATATCAGCAGCATAG+TGG | 0.569484 | 4.2:+64066776 | None:intergenic |
TGTCTTGTGTGTACTTCTTG+CGG | 0.570627 | 4.2:+64064918 | None:intergenic |
ACTGGTTGATTGGCTTGTTG+AGG | 0.576476 | 4.2:-64066457 | MS.gene71260:intron |
AGCGGCACAAGCTTCCTACA+AGG | 0.577919 | 4.2:-64065393 | MS.gene71260:intron |
ATTGACTCGTGCTCGAGCTG+TGG | 0.579601 | 4.2:-64067668 | MS.gene71260:CDS |
GGATAACACATACACAAAAG+AGG | 0.584093 | 4.2:-64065893 | MS.gene71260:CDS |
AGAGAGAGACTTCAGCTACT+GGG | 0.585840 | 4.2:-64066078 | MS.gene71260:CDS |
CAAGATGTCACTAACAATTG+TGG | 0.589172 | 4.2:-64067505 | MS.gene71260:CDS |
CCTTTCTTCTGAGAACTCAA+AGG | 0.595834 | 4.2:+64067054 | None:intergenic |
GCATAGTGGCTGCATAGTTG+AGG | 0.597253 | 4.2:+64066790 | None:intergenic |
TTGTAGGAGGTTTCTTCGAG+CGG | 0.597311 | 4.2:-64065411 | MS.gene71260:intron |
TGACCACTTGCGTGTTGCTG+AGG | 0.600917 | 4.2:-64066755 | MS.gene71260:intron |
TAAAGACTTCTGCTTCATCA+CGG | 0.601348 | 4.2:-64065914 | MS.gene71260:CDS |
GATTATTGTTTGTGCCACAC+TGG | 0.602071 | 4.2:+64067112 | None:intergenic |
TGTGTACTTCTTGCGGATGG+CGG | 0.608917 | 4.2:+64064925 | None:intergenic |
ATGCAGCGACCATAGAAGGA+AGG | 0.622018 | 4.2:+64065197 | None:intergenic |
AGATCAGTCAAGCCACCCAT+GGG | 0.623354 | 4.2:-64065146 | MS.gene71260:intron |
AGCAGAAGTCTTTAATACGA+GGG | 0.626136 | 4.2:+64065923 | None:intergenic |
CAAGAAGTACACACAAGACA+AGG | 0.627309 | 4.2:-64064915 | MS.gene71260:intron |
AGACATCTCGAATATCTGCT+CGG | 0.628981 | 4.2:-64067077 | MS.gene71260:CDS |
CGGTGAGTTCAATGGAAATG+CGG | 0.632380 | 4.2:-64067206 | MS.gene71260:CDS |
TGTCCATCGTGCAAGAAACA+CGG | 0.632857 | 4.2:+64065171 | None:intergenic |
CCAGGCTAAGAAAAGGAAGG+TGG | 0.645605 | 4.2:-64067307 | MS.gene71260:intron |
AAACCTCAGCAACACGCAAG+TGG | 0.651996 | 4.2:+64066752 | None:intergenic |
GCAGAAGTCTTTAATACGAG+GGG | 0.653858 | 4.2:+64065924 | None:intergenic |
CTGCCAGGCTAAGAAAAGGA+AGG | 0.656987 | 4.2:-64067310 | MS.gene71260:intron |
AAGCAGAAGTCTTTAATACG+AGG | 0.678996 | 4.2:+64065922 | None:intergenic |
GAAAAGAACTAACCCATGGG+TGG | 0.679908 | 4.2:+64065134 | None:intergenic |
TAACACATACACAAAAGAGG+AGG | 0.680647 | 4.2:-64065890 | MS.gene71260:intron |
AGGATGAGTTCCAACCAGTG+TGG | 0.684018 | 4.2:-64067126 | MS.gene71260:CDS |
ACAGTTACCACCAATGAAGG+AGG | 0.688615 | 4.2:-64067629 | MS.gene71260:CDS |
TTTGAGTCAGCTATGAACGG+TGG | 0.693132 | 4.2:+64067231 | None:intergenic |
AATCAATGAGATATACAGTG+AGG | 0.724831 | 4.2:+64066127 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAACAGAAGTAGAAATTA+AGG | + | chr4.2:64067349-64067368 | None:intergenic | 20.0% |
!! | AACTAATATAATACACATCT+AGG | + | chr4.2:64066177-64066196 | None:intergenic | 20.0% |
!! | AGTTATGTTACAAAGTAAAT+AGG | + | chr4.2:64067613-64067632 | None:intergenic | 20.0% |
!! | GTTATGTTACAAAGTAAATA+GGG | + | chr4.2:64067612-64067631 | None:intergenic | 20.0% |
!! | TAGTCATTAGATTTCATTTA+GGG | - | chr4.2:64066697-64066716 | MS.gene71260:intron | 20.0% |
!! | TTTATAAAATGCATGCTAAT+CGG | - | chr4.2:64065748-64065767 | MS.gene71260:intron | 20.0% |
!! | TTTCTTTGAGTAATTTCATA+TGG | + | chr4.2:64067320-64067339 | None:intergenic | 20.0% |
!!! | ATAAATGACTTTTAGTTAGT+TGG | - | chr4.2:64065463-64065482 | MS.gene71260:intron | 20.0% |
! | AAACAAGAACCATTTGATAT+TGG | + | chr4.2:64064988-64065007 | None:intergenic | 25.0% |
! | AAATGAAATCTAATGACTAG+AGG | + | chr4.2:64066696-64066715 | None:intergenic | 25.0% |
! | ACAATGTACTACATAAATAG+AGG | + | chr4.2:64065389-64065408 | None:intergenic | 25.0% |
! | ATGAGCATTACTAAACATAA+TGG | + | chr4.2:64066423-64066442 | None:intergenic | 25.0% |
! | CAATGTACTACATAAATAGA+GGG | + | chr4.2:64065388-64065407 | None:intergenic | 25.0% |
! | CAATTATCTTAGTACATTCT+TGG | - | chr4.2:64066977-64066996 | MS.gene71260:intron | 25.0% |
! | CTAGTCATTAGATTTCATTT+AGG | - | chr4.2:64066696-64066715 | MS.gene71260:intron | 25.0% |
! | TGCATATATCCAATATCAAA+TGG | - | chr4.2:64064976-64064995 | MS.gene71260:CDS | 25.0% |
! | TTTGAGTAATTTCATATGGA+AGG | + | chr4.2:64067316-64067335 | None:intergenic | 25.0% |
! | TTTGTCTTGAAATGTATTGA+AGG | - | chr4.2:64065007-64065026 | MS.gene71260:CDS | 25.0% |
!! | CTCTCTTTCAATACAATTTT+TGG | + | chr4.2:64066321-64066340 | None:intergenic | 25.0% |
!! | TCTTGAACAGATTTCTTTTA+TGG | + | chr4.2:64065433-64065452 | None:intergenic | 25.0% |
!! | TGATTAATACTAAAGTACCA+AGG | - | chr4.2:64066586-64066605 | MS.gene71260:intron | 25.0% |
!! | TTTCATTTAGGGTCTTAAAA+AGG | - | chr4.2:64066708-64066727 | MS.gene71260:intron | 25.0% |
!! | TTTTTGTAAAGACTACTGAA+CGG | + | chr4.2:64066932-64066951 | None:intergenic | 25.0% |
!!! | AACTTAGTTGTGGTTATTTT+TGG | - | chr4.2:64065496-64065515 | MS.gene71260:intron | 25.0% |
AAAGAAAAGAACTAACCCAT+GGG | + | chr4.2:64067285-64067304 | None:intergenic | 30.0% | |
AAGGATTCATATCTCAATAG+TGG | - | chr4.2:64065026-64065045 | MS.gene71260:CDS | 30.0% | |
AATCAATGAGATATACAGTG+AGG | + | chr4.2:64066289-64066308 | None:intergenic | 30.0% | |
AGTAATGCTCAATACAAATC+TGG | + | chr4.2:64067089-64067108 | None:intergenic | 30.0% | |
ATATCTTCCTCGTAAAAAGA+GGG | - | chr4.2:64064877-64064896 | MS.gene71260:intron | 30.0% | |
CAATTGAATAAAACATGCAG+AGG | - | chr4.2:64067119-64067138 | MS.gene71260:CDS | 30.0% | |
CTGAAAGTAGCAATTTCATA+TGG | - | chr4.2:64066625-64066644 | MS.gene71260:intron | 30.0% | |
CTTAAATCCAACTGAAATTC+AGG | - | chr4.2:64064952-64064971 | MS.gene71260:CDS | 30.0% | |
GACAAACAACTTAGCATAAA+AGG | + | chr4.2:64065846-64065865 | None:intergenic | 30.0% | |
TATGTGCAGTAAAGCAATAT+TGG | + | chr4.2:64065719-64065738 | None:intergenic | 30.0% | |
TCACTGTATATCTCATTGAT+TGG | - | chr4.2:64066288-64066307 | MS.gene71260:intron | 30.0% | |
TCATATTGTTCAGCTAAACT+TGG | + | chr4.2:64066034-64066053 | None:intergenic | 30.0% | |
TGAACATGAATTCAACACAT+GGG | + | chr4.2:64066227-64066246 | None:intergenic | 30.0% | |
TGTACTAAGATAATTGCAAG+AGG | + | chr4.2:64066973-64066992 | None:intergenic | 30.0% | |
TTAGATCATCAGAAGATTTC+AGG | - | chr4.2:64065231-64065250 | MS.gene71260:CDS | 30.0% | |
TTCAGAAATGTTACCTTTCT+TGG | + | chr4.2:64065546-64065565 | None:intergenic | 30.0% | |
! | AACAATGTTTCAAGCAGTTT+TGG | + | chr4.2:64067711-64067730 | None:intergenic | 30.0% |
! | AGCAAATAGTTGATATGAAG+AGG | + | chr4.2:64066861-64066880 | None:intergenic | 30.0% |
! | AGGTAACATTTCTGAACTTT+TGG | - | chr4.2:64065550-64065569 | MS.gene71260:CDS | 30.0% |
! | TAAACATAATGGAACACAAG+AGG | + | chr4.2:64066412-64066431 | None:intergenic | 30.0% |
!! | CTCTGCATGTTTTATTCAAT+TGG | + | chr4.2:64067121-64067140 | None:intergenic | 30.0% |
!! | TACTCAATGTATTGATTGAC+AGG | - | chr4.2:64066805-64066824 | MS.gene71260:CDS | 30.0% |
!! | TTCATATCTCAATAGTGGAT+AGG | - | chr4.2:64065031-64065050 | MS.gene71260:CDS | 30.0% |
!!! | TAGTACATTCTTGGTTTTGT+AGG | - | chr4.2:64066986-64067005 | MS.gene71260:intron | 30.0% |
!!! | TCTTTTAGAATTGGCTCTTA+GGG | + | chr4.2:64064840-64064859 | None:intergenic | 30.0% |
!!! | TGAAACTGCTCTTTTAGAAT+TGG | + | chr4.2:64064849-64064868 | None:intergenic | 30.0% |
!!! | TTTGCTGTTTTGTAAGTATG+TGG | - | chr4.2:64066756-64066775 | MS.gene71260:CDS | 30.0% |
AAGCAGAAGTCTTTAATACG+AGG | + | chr4.2:64066494-64066513 | None:intergenic | 35.0% | |
ACAAGGTAAAAAGATCGATC+TGG | - | chr4.2:64067037-64067056 | MS.gene71260:intron | 35.0% | |
AGCAGAAGTCTTTAATACGA+GGG | + | chr4.2:64066493-64066512 | None:intergenic | 35.0% | |
ATTGTGGCGAAAATACAAAC+AGG | - | chr4.2:64064924-64064943 | MS.gene71260:CDS | 35.0% | |
CAAATCTGATGCTTTGTAAG+AGG | + | chr4.2:64067407-64067426 | None:intergenic | 35.0% | |
CAAGATGTCACTAACAATTG+TGG | - | chr4.2:64064908-64064927 | MS.gene71260:intron | 35.0% | |
CAAGGTAAAAAGATCGATCT+GGG | - | chr4.2:64067038-64067057 | MS.gene71260:intron | 35.0% | |
CACGTAAGTTCTCAACTTAA+GGG | - | chr4.2:64066379-64066398 | MS.gene71260:intron | 35.0% | |
CATATATATCAGCAGCATAG+TGG | + | chr4.2:64065640-64065659 | None:intergenic | 35.0% | |
CATATCTTCCTCGTAAAAAG+AGG | - | chr4.2:64064876-64064895 | MS.gene71260:intron | 35.0% | |
CATGTGTTGAATTCATGTTC+AGG | - | chr4.2:64066226-64066245 | MS.gene71260:intron | 35.0% | |
CTGAACATGAATTCAACACA+TGG | + | chr4.2:64066228-64066247 | None:intergenic | 35.0% | |
CTTAAACTTCCTTCCTTCTA+TGG | - | chr4.2:64067207-64067226 | MS.gene71260:CDS | 35.0% | |
GAAAGAAAAGAACTAACCCA+TGG | + | chr4.2:64067286-64067305 | None:intergenic | 35.0% | |
GAACTAACACTGATGAACTA+TGG | - | chr4.2:64067181-64067200 | MS.gene71260:CDS | 35.0% | |
GGATAACACATACACAAAAG+AGG | - | chr4.2:64066520-64066539 | MS.gene71260:CDS | 35.0% | |
GTTTCCATGAAGTTAGGATA+AGG | + | chr4.2:64065900-64065919 | None:intergenic | 35.0% | |
TAAAGACTTCTGCTTCATCA+CGG | - | chr4.2:64066499-64066518 | MS.gene71260:CDS | 35.0% | |
TAACACATACACAAAAGAGG+AGG | - | chr4.2:64066523-64066542 | MS.gene71260:CDS | 35.0% | |
TATGCAACCTGAATTTCAGT+TGG | + | chr4.2:64064962-64064981 | None:intergenic | 35.0% | |
TCAACCTGATGTTTCAAATG+AGG | - | chr4.2:64065139-64065158 | MS.gene71260:intron | 35.0% | |
TGATTGACAGGTAGTAAAAC+TGG | - | chr4.2:64066817-64066836 | MS.gene71260:CDS | 35.0% | |
TGTACTGTTTCCATGAAGTT+AGG | + | chr4.2:64065906-64065925 | None:intergenic | 35.0% | |
! | AATTCATGTTCAGGTTTCTG+AGG | - | chr4.2:64066235-64066254 | MS.gene71260:intron | 35.0% |
! | ATTCATGTTCAGGTTTCTGA+GGG | - | chr4.2:64066236-64066255 | MS.gene71260:intron | 35.0% |
! | GATCGATCTTTTTACCTTGT+AGG | + | chr4.2:64067037-64067056 | None:intergenic | 35.0% |
! | TTTCAGGTGCTTAGATGATT+TGG | - | chr4.2:64065247-64065266 | MS.gene71260:CDS | 35.0% |
!! | GTTTTGATGTATGCTTTCCT+TGG | + | chr4.2:64066606-64066625 | None:intergenic | 35.0% |
!!! | ACTTTTAGTTAGTTGGTGAC+TGG | - | chr4.2:64065470-64065489 | MS.gene71260:intron | 35.0% |
!!! | CATTTTTTCAGCTGTCAAGA+AGG | - | chr4.2:64065874-64065893 | MS.gene71260:intron | 35.0% |
!!! | CTCTTTTAGAATTGGCTCTT+AGG | + | chr4.2:64064841-64064860 | None:intergenic | 35.0% |
!!! | CTTTTAGAATTGGCTCTTAG+GGG | + | chr4.2:64064839-64064858 | None:intergenic | 35.0% |
!!! | TACATTCTTGGTTTTGTAGG+AGG | - | chr4.2:64066989-64067008 | MS.gene71260:intron | 35.0% |
AAGTACTCCAACTCAATGCT+AGG | + | chr4.2:64067145-64067164 | None:intergenic | 40.0% | |
AAGTTGACAAGAAACACCTG+AGG | + | chr4.2:64066901-64066920 | None:intergenic | 40.0% | |
ACAAGGTATGTCAGAAAGAG+AGG | - | chr4.2:64067515-64067534 | MS.gene71260:CDS | 40.0% | |
AGACATCTCGAATATCTGCT+CGG | - | chr4.2:64065336-64065355 | MS.gene71260:intron | 40.0% | |
CAAATTGTTGCAGCCAAGAA+AGG | - | chr4.2:64065530-64065549 | MS.gene71260:intron | 40.0% | |
CCACGTAAGTTCTCAACTTA+AGG | - | chr4.2:64066378-64066397 | MS.gene71260:intron | 40.0% | |
CTACTACCAAAACTTTCCTC+AGG | - | chr4.2:64066882-64066901 | MS.gene71260:CDS | 40.0% | |
GAGATTCTATGTTCTCGTGT+TGG | + | chr4.2:64066656-64066675 | None:intergenic | 40.0% | |
GATTATTGTTTGTGCCACAC+TGG | + | chr4.2:64065304-64065323 | None:intergenic | 40.0% | |
GCAGAAGTCTTTAATACGAG+GGG | + | chr4.2:64066492-64066511 | None:intergenic | 40.0% | |
GTTCTCAACTTAAGGGAAGT+TGG | - | chr4.2:64066386-64066405 | MS.gene71260:intron | 40.0% | |
TGACTGGTGTAACTTAGTTG+TGG | - | chr4.2:64065486-64065505 | MS.gene71260:intron | 40.0% | |
TGGTAGAGACAATTGTGACA+GGG | + | chr4.2:64065699-64065718 | None:intergenic | 40.0% | |
TGGTTGGAACTCATCCTAAA+AGG | + | chr4.2:64065284-64065303 | None:intergenic | 40.0% | |
TGTCTTGTGTGTACTTCTTG+CGG | + | chr4.2:64067498-64067517 | None:intergenic | 40.0% | |
TTGGTAGAGACAATTGTGAC+AGG | + | chr4.2:64065700-64065719 | None:intergenic | 40.0% | |
! | AAGGCCTTATCCTAACTTCA+TGG | - | chr4.2:64065893-64065912 | MS.gene71260:CDS | 40.0% |
! | AGAATTGCCCTCTTTTTACG+AGG | + | chr4.2:64064887-64064906 | None:intergenic | 40.0% |
! | CAAGAAGTACACACAAGACA+AGG | - | chr4.2:64067498-64067517 | MS.gene71260:CDS | 40.0% |
! | CCTTTCTTCTGAGAACTCAA+AGG | + | chr4.2:64065362-64065381 | None:intergenic | 40.0% |
! | CCTTTGAGTTCTCAGAAGAA+AGG | - | chr4.2:64065359-64065378 | MS.gene71260:intron | 40.0% |
! | GAAACACCTGAGGAAAGTTT+TGG | + | chr4.2:64066891-64066910 | None:intergenic | 40.0% |
! | GGAACCTCATTTGAAACATC+AGG | + | chr4.2:64065146-64065165 | None:intergenic | 40.0% |
! | GTTCATAGCTGACTCAAAAC+CGG | - | chr4.2:64065187-64065206 | MS.gene71260:CDS | 40.0% |
! | TGGAAGACAATGCACCTTTT+AGG | - | chr4.2:64065267-64065286 | MS.gene71260:CDS | 40.0% |
!! | CCTTAAGTTGAGAACTTACG+TGG | + | chr4.2:64066381-64066400 | None:intergenic | 40.0% |
!! | CTGAGGAAAGTTTTGGTAGT+AGG | + | chr4.2:64066884-64066903 | None:intergenic | 40.0% |
!! | TAGCATTGAGTTGGAGTACT+TGG | - | chr4.2:64067144-64067163 | MS.gene71260:CDS | 40.0% |
!! | TTTGAAACATCAGGTTGAGC+AGG | + | chr4.2:64065137-64065156 | None:intergenic | 40.0% |
!!! | CTGTTACTTTTATGTCTGCC+AGG | - | chr4.2:64065088-64065107 | MS.gene71260:intron | 40.0% |
!!! | GGTTTTGAGTCAGCTATGAA+CGG | + | chr4.2:64065188-64065207 | None:intergenic | 40.0% |
AAGAGAGAGACTTCAGCTAC+TGG | - | chr4.2:64066334-64066353 | MS.gene71260:intron | 45.0% | |
ACAGTTACCACCAATGAAGG+AGG | - | chr4.2:64064784-64064803 | MS.gene71260:intron | 45.0% | |
AGAGAGAGACTTCAGCTACT+GGG | - | chr4.2:64066335-64066354 | MS.gene71260:intron | 45.0% | |
ATGTCTGCCAGGCTAAGAAA+AGG | - | chr4.2:64065099-64065118 | MS.gene71260:intron | 45.0% | |
ATTGTTTGTGCCACACTGGT+TGG | + | chr4.2:64065300-64065319 | None:intergenic | 45.0% | |
CGCATTTCCATTGAACTCAC+CGG | + | chr4.2:64065209-64065228 | None:intergenic | 45.0% | |
CGGTGAGTTCAATGGAAATG+CGG | - | chr4.2:64065207-64065226 | MS.gene71260:CDS | 45.0% | |
CTCAAAACCGGTGAGTTCAA+TGG | - | chr4.2:64065199-64065218 | MS.gene71260:CDS | 45.0% | |
GAAAAGAACTAACCCATGGG+TGG | + | chr4.2:64067282-64067301 | None:intergenic | 45.0% | |
GAGCAGATATTCGAGATGTC+TGG | + | chr4.2:64065337-64065356 | None:intergenic | 45.0% | |
GAGGCATACTGTTCAAGAGT+TGG | + | chr4.2:64067388-64067407 | None:intergenic | 45.0% | |
TCATCAGTGTTAGTTCAGCC+AGG | + | chr4.2:64067177-64067196 | None:intergenic | 45.0% | |
TGCTTCTGATTCTGAGTTCC+TGG | + | chr4.2:64064815-64064834 | None:intergenic | 45.0% | |
TGGACAGTTACCACCAATGA+AGG | - | chr4.2:64064781-64064800 | MS.gene71260:intron | 45.0% | |
TGTCCATCGTGCAAGAAACA+CGG | + | chr4.2:64067245-64067264 | None:intergenic | 45.0% | |
TTGTAGGAGGTTTCTTCGAG+CGG | - | chr4.2:64067002-64067021 | MS.gene71260:intron | 45.0% | |
TTGTGTGTACTTCTTGCGGA+TGG | + | chr4.2:64067494-64067513 | None:intergenic | 45.0% | |
TTTGAGTCAGCTATGAACGG+TGG | + | chr4.2:64065185-64065204 | None:intergenic | 45.0% | |
! | GGAGTACTTGGCAAATTACC+TGG | - | chr4.2:64067156-64067175 | MS.gene71260:CDS | 45.0% |
!! | AAGAGTGTCACTCTGAAAGC+TGG | - | chr4.2:64064707-64064726 | MS.gene71260:CDS | 45.0% |
!! | ACTGGTTGATTGGCTTGTTG+AGG | - | chr4.2:64065956-64065975 | MS.gene71260:intron | 45.0% |
!! | GCTGTGGCTTTAAGTACATC+TGG | - | chr4.2:64064761-64064780 | MS.gene71260:intron | 45.0% |
AAACCTCAGCAACACGCAAG+TGG | + | chr4.2:64065664-64065683 | None:intergenic | 50.0% | |
AGATCAGTCAAGCCACCCAT+GGG | - | chr4.2:64067267-64067286 | MS.gene71260:CDS | 50.0% | |
AGGATGAGTTCCAACCAGTG+TGG | - | chr4.2:64065287-64065306 | MS.gene71260:intron | 50.0% | |
ATGCAGCGACCATAGAAGGA+AGG | + | chr4.2:64067219-64067238 | None:intergenic | 50.0% | |
CCAGGCTAAGAAAAGGAAGG+TGG | - | chr4.2:64065106-64065125 | MS.gene71260:intron | 50.0% | |
CTGCCAGGCTAAGAAAAGGA+AGG | - | chr4.2:64065103-64065122 | MS.gene71260:intron | 50.0% | |
CTTCCGTGTTTCTTGCACGA+TGG | - | chr4.2:64067239-64067258 | MS.gene71260:CDS | 50.0% | |
GAAGATGCAGCGACCATAGA+AGG | + | chr4.2:64067223-64067242 | None:intergenic | 50.0% | |
GCATAGTGGCTGCATAGTTG+AGG | + | chr4.2:64065626-64065645 | None:intergenic | 50.0% | |
TAGATCAGTCAAGCCACCCA+TGG | - | chr4.2:64067266-64067285 | MS.gene71260:CDS | 50.0% | |
TGTGTACTTCTTGCGGATGG+CGG | + | chr4.2:64067491-64067510 | None:intergenic | 50.0% | |
! | CCACCTTCCTTTTCTTAGCC+TGG | + | chr4.2:64065109-64065128 | None:intergenic | 50.0% |
! | TCTTGCGGATGGCGGTTAAA+GGG | + | chr4.2:64067483-64067502 | None:intergenic | 50.0% |
! | TGCGTGCGATACTGGTTGAT+TGG | - | chr4.2:64065946-64065965 | MS.gene71260:CDS | 50.0% |
! | TTCTTGCGGATGGCGGTTAA+AGG | + | chr4.2:64067484-64067503 | None:intergenic | 50.0% |
ACCAGTATCGCACGCATGCT+TGG | + | chr4.2:64065942-64065961 | None:intergenic | 55.0% | |
AGCGGCACAAGCTTCCTACA+AGG | - | chr4.2:64067020-64067039 | MS.gene71260:intron | 55.0% | |
CCAATGAAGGAGGTAGCACC+AGG | - | chr4.2:64064794-64064813 | MS.gene71260:intron | 55.0% | |
CGAGCACGAGTCAATCGACT+TGG | + | chr4.2:64064740-64064759 | None:intergenic | 55.0% | |
GCGTCTATGTCAGCGACATC+TGG | + | chr4.2:64065590-64065609 | None:intergenic | 55.0% | |
TCCAAGCATGCGTGCGATAC+TGG | - | chr4.2:64065938-64065957 | MS.gene71260:CDS | 55.0% | |
! | GCAGAGGCCTAGCATTGAGT+TGG | - | chr4.2:64067135-64067154 | MS.gene71260:CDS | 55.0% |
! | GGTGCTACCTCCTTCATTGG+TGG | + | chr4.2:64064794-64064813 | None:intergenic | 55.0% |
! | TGACCACTTGCGTGTTGCTG+AGG | - | chr4.2:64065658-64065677 | MS.gene71260:intron | 55.0% |
!! | ATTGACTCGTGCTCGAGCTG+TGG | - | chr4.2:64064745-64064764 | MS.gene71260:intron | 55.0% |
!! | CCTGGTGCTACCTCCTTCAT+TGG | + | chr4.2:64064797-64064816 | None:intergenic | 55.0% |
GGTGGTAGCTCAGCAGCTGA+TGG | + | chr4.2:64065167-64065186 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 64064701 | 64067734 | 64064701 | ID=MS.gene71260 |
chr4.2 | mRNA | 64064701 | 64067734 | 64064701 | ID=MS.gene71260.t1;Parent=MS.gene71260 |
chr4.2 | exon | 64067462 | 64067734 | 64067462 | ID=MS.gene71260.t1.exon1;Parent=MS.gene71260.t1 |
chr4.2 | CDS | 64067462 | 64067734 | 64067462 | ID=cds.MS.gene71260.t1;Parent=MS.gene71260.t1 |
chr4.2 | exon | 64067055 | 64067325 | 64067055 | ID=MS.gene71260.t1.exon2;Parent=MS.gene71260.t1 |
chr4.2 | CDS | 64067055 | 64067325 | 64067055 | ID=cds.MS.gene71260.t1;Parent=MS.gene71260.t1 |
chr4.2 | exon | 64066756 | 64066910 | 64066756 | ID=MS.gene71260.t1.exon3;Parent=MS.gene71260.t1 |
chr4.2 | CDS | 64066756 | 64066910 | 64066756 | ID=cds.MS.gene71260.t1;Parent=MS.gene71260.t1 |
chr4.2 | exon | 64066458 | 64066550 | 64066458 | ID=MS.gene71260.t1.exon4;Parent=MS.gene71260.t1 |
chr4.2 | CDS | 64066458 | 64066550 | 64066458 | ID=cds.MS.gene71260.t1;Parent=MS.gene71260.t1 |
chr4.2 | exon | 64066054 | 64066187 | 64066054 | ID=MS.gene71260.t1.exon5;Parent=MS.gene71260.t1 |
chr4.2 | CDS | 64066054 | 64066187 | 64066054 | ID=cds.MS.gene71260.t1;Parent=MS.gene71260.t1 |
chr4.2 | exon | 64065891 | 64065966 | 64065891 | ID=MS.gene71260.t1.exon6;Parent=MS.gene71260.t1 |
chr4.2 | CDS | 64065891 | 64065966 | 64065891 | ID=cds.MS.gene71260.t1;Parent=MS.gene71260.t1 |
chr4.2 | exon | 64065532 | 64065608 | 64065532 | ID=MS.gene71260.t1.exon7;Parent=MS.gene71260.t1 |
chr4.2 | CDS | 64065532 | 64065608 | 64065532 | ID=cds.MS.gene71260.t1;Parent=MS.gene71260.t1 |
chr4.2 | exon | 64065394 | 64065427 | 64065394 | ID=MS.gene71260.t1.exon8;Parent=MS.gene71260.t1 |
chr4.2 | CDS | 64065394 | 64065427 | 64065394 | ID=cds.MS.gene71260.t1;Parent=MS.gene71260.t1 |
chr4.2 | exon | 64065147 | 64065296 | 64065147 | ID=MS.gene71260.t1.exon9;Parent=MS.gene71260.t1 |
chr4.2 | CDS | 64065147 | 64065296 | 64065147 | ID=cds.MS.gene71260.t1;Parent=MS.gene71260.t1 |
chr4.2 | exon | 64064916 | 64065053 | 64064916 | ID=MS.gene71260.t1.exon10;Parent=MS.gene71260.t1 |
chr4.2 | CDS | 64064916 | 64065053 | 64064916 | ID=cds.MS.gene71260.t1;Parent=MS.gene71260.t1 |
chr4.2 | exon | 64064701 | 64064754 | 64064701 | ID=MS.gene71260.t1.exon11;Parent=MS.gene71260.t1 |
chr4.2 | CDS | 64064701 | 64064754 | 64064701 | ID=cds.MS.gene71260.t1;Parent=MS.gene71260.t1 |
Gene Sequence |
Protein sequence |