Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017190.t1 | XP_027187359.1 | 85.2 | 263 | 23 | 2 | 1 | 263 | 1 | 247 | 1.40E-120 | 442.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017190.t1 | Q946Y7 | 68.4 | 212 | 63 | 3 | 1 | 211 | 1 | 209 | 2.9e-74 | 280.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017190.t1 | A0A3Q7X0P4 | 85.2 | 263 | 23 | 2 | 1 | 263 | 1 | 247 | 1.0e-120 | 442.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene063476 | MS.gene017190 | PPI |
| MS.gene044431 | MS.gene017190 | PPI |
| MS.gene78212 | MS.gene017190 | PPI |
| MS.gene69311 | MS.gene017190 | PPI |
| MS.gene052932 | MS.gene017190 | PPI |
| MS.gene44169 | MS.gene017190 | PPI |
| MS.gene44168 | MS.gene017190 | PPI |
| MS.gene072972 | MS.gene017190 | PPI |
| MS.gene77217 | MS.gene017190 | PPI |
| MS.gene81965 | MS.gene017190 | PPI |
| MS.gene40807 | MS.gene017190 | PPI |
| MS.gene056096 | MS.gene017190 | PPI |
| MS.gene65117 | MS.gene017190 | PPI |
| MS.gene056094 | MS.gene017190 | PPI |
| MS.gene02663 | MS.gene017190 | PPI |
| MS.gene66057 | MS.gene017190 | PPI |
| MS.gene033077 | MS.gene017190 | PPI |
| MS.gene005292 | MS.gene017190 | PPI |
| MS.gene013657 | MS.gene017190 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017190.t1 | MTR_5g092870 | 99.526 | 211 | 1 | 0 | 1 | 211 | 1 | 211 | 6.70e-154 | 430 |
| MS.gene017190.t1 | MTR_3g052210 | 77.251 | 211 | 44 | 2 | 1 | 211 | 1 | 207 | 9.24e-116 | 333 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017190.t1 | AT1G28490 | 68.396 | 212 | 63 | 3 | 1 | 211 | 1 | 209 | 1.38e-100 | 294 |
| MS.gene017190.t1 | AT1G28490 | 68.790 | 157 | 46 | 2 | 55 | 211 | 11 | 164 | 2.47e-70 | 216 |
| MS.gene017190.t1 | AT1G28490 | 68.790 | 157 | 46 | 2 | 55 | 211 | 17 | 170 | 5.89e-70 | 215 |
Find 66 sgRNAs with CRISPR-Local
Find 313 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCTTTGACAACGTAAAA+TGG | 0.199042 | 5.3:+74446339 | None:intergenic |
| TCCAAGTGAGTTTCCGCTTT+TGG | 0.200310 | 5.3:-74441936 | MS.gene017190:CDS |
| TCTTGGTTGTAAATGCAAAA+AGG | 0.254892 | 5.3:-74441683 | MS.gene017190:CDS |
| TACCTGGGTGCGAGCATTGC+TGG | 0.310121 | 5.3:+74444703 | None:intergenic |
| TGAAGAATACCAAGATAAAA+AGG | 0.311255 | 5.3:+74441724 | None:intergenic |
| GGAAAAGATTCTAGATGAAC+TGG | 0.327556 | 5.3:-74441998 | MS.gene017190:CDS |
| TGATAGAAAGGTGGATGAAT+TGG | 0.340172 | 5.3:-74444807 | MS.gene017190:intron |
| GACGTACTTTGATGAGAATC+TGG | 0.370989 | 5.3:+74444387 | None:intergenic |
| CATTATCCCCAGAGGCATAT+TGG | 0.373000 | 5.3:+74444355 | None:intergenic |
| TAGCATCTAGAGATCCTTCT+TGG | 0.380240 | 5.3:-74444769 | MS.gene017190:CDS |
| TGGGAAAACACTTCTGATAC+TGG | 0.386415 | 5.3:-74445713 | MS.gene017190:CDS |
| GATGATGATATGTGGTTTGC+TGG | 0.410145 | 5.3:-74441760 | MS.gene017190:CDS |
| CATTGCTGGTCCACCTCCTC+CGG | 0.425273 | 5.3:+74444717 | None:intergenic |
| CAATACATGAAGAGCTCCTT+GGG | 0.426328 | 5.3:-74442212 | MS.gene017190:CDS |
| AAGTCTAACCAATATGCCTC+TGG | 0.429106 | 5.3:-74444363 | MS.gene017190:CDS |
| ATGAAGAAGGCCAGTGCAAA+GGG | 0.430950 | 5.3:-74441789 | MS.gene017190:CDS |
| CATCATCTGCCCCTTTGCAC+TGG | 0.444110 | 5.3:+74441779 | None:intergenic |
| AGTTTAAGTGTACAGAGAAT+CGG | 0.466460 | 5.3:-74442249 | MS.gene017190:CDS |
| CAGCAAGAACTTCCTTTGAA+AGG | 0.473857 | 5.3:+74445678 | None:intergenic |
| TTGTGGAAGTATTGAGTGGC+AGG | 0.474925 | 5.3:-74445654 | MS.gene017190:intron |
| AAGGAAGTTCTTGCTGCTTG+TGG | 0.475725 | 5.3:-74445671 | MS.gene017190:CDS |
| CTAGTATAAGTGGGATGCAC+AGG | 0.476219 | 5.3:-74444425 | MS.gene017190:CDS |
| ACAATACATGAAGAGCTCCT+TGG | 0.478003 | 5.3:-74442213 | MS.gene017190:CDS |
| CTAGTCGTTTCTGAATGTCT+TGG | 0.480262 | 5.3:-74441700 | MS.gene017190:CDS |
| ACAACTCATGCTAGTATAAG+TGG | 0.493222 | 5.3:-74444435 | MS.gene017190:CDS |
| ATTAAGAGAACAGTGGAAGC+TGG | 0.496755 | 5.3:-74444474 | MS.gene017190:CDS |
| TACTGCTATTGATAGGCAGC+AGG | 0.501024 | 5.3:-74442292 | MS.gene017190:intron |
| TCATAGAATCAGAATCAGAT+AGG | 0.505091 | 5.3:-74444326 | MS.gene017190:CDS |
| ATGAAGTGGAGATTGAAAAC+CGG | 0.508658 | 5.3:-74444736 | MS.gene017190:CDS |
| TCCAAAAGCGGAAACTCACT+TGG | 0.514277 | 5.3:+74441935 | None:intergenic |
| GAGAACAGTGGAAGCTGGAA+AGG | 0.519334 | 5.3:-74444469 | MS.gene017190:CDS |
| ACATGAAGAGCTCCTTGGGC+AGG | 0.525155 | 5.3:-74442208 | MS.gene017190:intron |
| AGTCTAACCAATATGCCTCT+GGG | 0.528315 | 5.3:-74444362 | MS.gene017190:CDS |
| AGATTGAAAACCGGAGGAGG+TGG | 0.529877 | 5.3:-74444727 | MS.gene017190:CDS |
| TTGGACAAAATCTAGACGAT+TGG | 0.532143 | 5.3:+74441954 | None:intergenic |
| GTACAGAGAATCGGAGGTGT+TGG | 0.534643 | 5.3:-74442240 | MS.gene017190:CDS |
| TCTAGAGATCCTTCTTGGTA+TGG | 0.537717 | 5.3:-74444764 | MS.gene017190:CDS |
| AGATGAACTGGGAAATGAGA+TGG | 0.539156 | 5.3:-74441986 | MS.gene017190:CDS |
| TATTGATAGGCAGCAGGACG+AGG | 0.542113 | 5.3:-74442286 | MS.gene017190:intron |
| AGTGGCAATGGTGATGAAGA+AGG | 0.556318 | 5.3:-74441802 | MS.gene017190:CDS |
| ATTTCAGAAAAGAGTGGCAA+TGG | 0.560428 | 5.3:-74441814 | MS.gene017190:intron |
| AGAACAGTGGAAGCTGGAAA+GGG | 0.568137 | 5.3:-74444468 | MS.gene017190:CDS |
| GATGAAGAAGGCCAGTGCAA+AGG | 0.571528 | 5.3:-74441790 | MS.gene017190:CDS |
| TGGAGATTGAAAACCGGAGG+AGG | 0.573238 | 5.3:-74444730 | MS.gene017190:CDS |
| TTGGTATGGCATTGATGAAG+TGG | 0.577534 | 5.3:-74444750 | MS.gene017190:CDS |
| TAAAATGGATCTTGAGCTGA+GGG | 0.587285 | 5.3:+74446354 | None:intergenic |
| CAAGACATTCAGAAACGACT+AGG | 0.594084 | 5.3:+74441701 | None:intergenic |
| TGAGCATTTGAACCTTTCAA+AGG | 0.596975 | 5.3:-74445690 | MS.gene017190:CDS |
| CTGCTTGTGGAAGTATTGAG+TGG | 0.603126 | 5.3:-74445658 | MS.gene017190:CDS |
| TCATCAATGCCATACCAAGA+AGG | 0.605775 | 5.3:+74444755 | None:intergenic |
| CAGAGAGCAAAATCCAAAAG+CGG | 0.608979 | 5.3:+74441923 | None:intergenic |
| GGATGCACAGGGAATTAATG+AGG | 0.609838 | 5.3:-74444413 | MS.gene017190:CDS |
| GACCAGCAATGCTCGCACCC+AGG | 0.617619 | 5.3:-74444705 | MS.gene017190:intron |
| CAACTCATGCTAGTATAAGT+GGG | 0.625213 | 5.3:-74444434 | MS.gene017190:CDS |
| ATATATCAGCTACCTGCCCA+AGG | 0.637394 | 5.3:+74442196 | None:intergenic |
| TTTATGATTTCAGAAAAGAG+TGG | 0.640500 | 5.3:-74441820 | MS.gene017190:intron |
| TAGTATAAGTGGGATGCACA+GGG | 0.644916 | 5.3:-74444424 | MS.gene017190:CDS |
| GTAAAATGGATCTTGAGCTG+AGG | 0.647163 | 5.3:+74446353 | None:intergenic |
| GTCTAACCAATATGCCTCTG+GGG | 0.647453 | 5.3:-74444361 | MS.gene017190:CDS |
| AAGTGGAGATTGAAAACCGG+AGG | 0.652309 | 5.3:-74444733 | MS.gene017190:CDS |
| GAAAAGATTCTAGATGAACT+GGG | 0.658756 | 5.3:-74441997 | MS.gene017190:CDS |
| GGGCAGATGATGATGATATG+TGG | 0.673837 | 5.3:-74441768 | MS.gene017190:CDS |
| TTAAGTGTACAGAGAATCGG+AGG | 0.688868 | 5.3:-74442246 | MS.gene017190:CDS |
| GCGCACAATTAAGAGAACAG+TGG | 0.704934 | 5.3:-74444481 | MS.gene017190:CDS |
| TGAAGAAGGCCAGTGCAAAG+GGG | 0.733851 | 5.3:-74441788 | MS.gene017190:CDS |
| GAAATCATCATTATCCCCAG+AGG | 0.750638 | 5.3:+74444347 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTTGTAAATATCATTAT+TGG | - | chr5.3:74442682-74442701 | MS.gene017190:intron | 10.0% |
| !! | TTCATTATCAATTATTATTT+GGG | - | chr5.3:74442204-74442223 | MS.gene017190:intron | 10.0% |
| !!! | TATAATATTTTCATAGTTTA+GGG | + | chr5.3:74442881-74442900 | None:intergenic | 10.0% |
| !!! | TGTCAATTTTTTTTTATATT+AGG | - | chr5.3:74445453-74445472 | MS.gene017190:intron | 10.0% |
| !!! | TTATAATATTTTCATAGTTT+AGG | + | chr5.3:74442882-74442901 | None:intergenic | 10.0% |
| !! | AGTAACTTTAACATAAATAT+AGG | - | chr5.3:74444155-74444174 | MS.gene017190:intron | 15.0% |
| !! | CTTCATTATCAATTATTATT+TGG | - | chr5.3:74442203-74442222 | MS.gene017190:intron | 15.0% |
| !!! | ATTTTATGGTTTTTTTTATG+TGG | - | chr5.3:74442241-74442260 | MS.gene017190:CDS | 15.0% |
| !!! | CAAATAATAATTGATAATGA+AGG | + | chr5.3:74442205-74442224 | None:intergenic | 15.0% |
| !!! | TTGGTTTTAAAAGTTAAATT+TGG | - | chr5.3:74444212-74444231 | MS.gene017190:intron | 15.0% |
| !! | AAACAATATAACTGAAATAG+TGG | - | chr5.3:74444070-74444089 | MS.gene017190:intron | 20.0% |
| !! | AAATATGTTTGGGTAAAATA+CGG | - | chr5.3:74444240-74444259 | MS.gene017190:intron | 20.0% |
| !! | AACAAATGTTGTTCATTAAT+AGG | - | chr5.3:74443506-74443525 | MS.gene017190:intron | 20.0% |
| !! | AATACAATGTTCAAGTATTT+AGG | - | chr5.3:74444183-74444202 | MS.gene017190:intron | 20.0% |
| !! | AATCAGAAAATGTATTTATG+TGG | + | chr5.3:74444317-74444336 | None:intergenic | 20.0% |
| !! | ATACTATATAAGATGAAGAA+AGG | + | chr5.3:74443741-74443760 | None:intergenic | 20.0% |
| !! | ATGGTTTATTCAAAATAAGA+AGG | - | chr5.3:74442984-74443003 | MS.gene017190:intron | 20.0% |
| !! | ATGTACACAAATTCAATTTA+AGG | + | chr5.3:74443781-74443800 | None:intergenic | 20.0% |
| !! | ATTTGGAAACAAAATATGTT+TGG | - | chr5.3:74444229-74444248 | MS.gene017190:intron | 20.0% |
| !! | CATCAATAAAAATAAGAACT+GGG | + | chr5.3:74442126-74442145 | None:intergenic | 20.0% |
| !! | CATCAATAAAAATAGGAATT+GGG | + | chr5.3:74441868-74441887 | None:intergenic | 20.0% |
| !! | TACATTGCATCAATAAAAAT+AGG | + | chr5.3:74441875-74441894 | None:intergenic | 20.0% |
| !! | TACTATATAAGATGAAGAAA+GGG | + | chr5.3:74443740-74443759 | None:intergenic | 20.0% |
| !! | TATATAATGAAAAAGCAACT+GGG | + | chr5.3:74445241-74445260 | None:intergenic | 20.0% |
| !! | TGGTTTATTCAAAATAAGAA+GGG | - | chr5.3:74442985-74443004 | MS.gene017190:intron | 20.0% |
| !! | TTCTTTAGCAAGAAAATTTA+AGG | - | chr5.3:74442622-74442641 | MS.gene017190:intron | 20.0% |
| !! | TTTGGAAACAAAATATGTTT+GGG | - | chr5.3:74444230-74444249 | MS.gene017190:intron | 20.0% |
| !!! | AAATGTATTTATGTGGTTTT+TGG | + | chr5.3:74444310-74444329 | None:intergenic | 20.0% |
| !!! | AAATTTGCATTTTTTCTTCA+TGG | - | chr5.3:74441751-74441770 | MS.gene017190:CDS | 20.0% |
| !!! | AATGGAAAACTTTATTTTCT+TGG | + | chr5.3:74443455-74443474 | None:intergenic | 20.0% |
| !!! | AATTGTTTTACTTTGTTTGT+GGG | - | chr5.3:74445313-74445332 | MS.gene017190:intron | 20.0% |
| !!! | ATTAACTTCACTTCTTTTTT+TGG | + | chr5.3:74445514-74445533 | None:intergenic | 20.0% |
| !!! | CAATCTTGAAAAAGTTTTAA+GGG | - | chr5.3:74444281-74444300 | MS.gene017190:intron | 20.0% |
| !!! | CTTAAAACTTTTTCAAGATT+GGG | + | chr5.3:74444282-74444301 | None:intergenic | 20.0% |
| !!! | GTGTTAATTTTTTGATAGAA+AGG | - | chr5.3:74443192-74443211 | MS.gene017190:intron | 20.0% |
| !!! | TAATTGTTTTACTTTGTTTG+TGG | - | chr5.3:74445312-74445331 | MS.gene017190:intron | 20.0% |
| !!! | TGTGATTGATATTGATTTTA+TGG | - | chr5.3:74442227-74442246 | MS.gene017190:CDS | 20.0% |
| !!! | TTAATTTTTTGATAGAAAGG+TGG | - | chr5.3:74443195-74443214 | MS.gene017190:intron | 20.0% |
| !!! | TTGATTGATGATAGAAAATT+GGG | - | chr5.3:74445287-74445306 | MS.gene017190:intron | 20.0% |
| !!! | TTTAGAATTTCAAAAGTTTG+AGG | + | chr5.3:74444974-74444993 | None:intergenic | 20.0% |
| !!! | TTTATTTTCTTGGTTACAAA+AGG | + | chr5.3:74443445-74443464 | None:intergenic | 20.0% |
| !!! | TTTGATTGATGATAGAAAAT+TGG | - | chr5.3:74445286-74445305 | MS.gene017190:intron | 20.0% |
| ! | AAAATACATTGACCAAATTG+TGG | + | chr5.3:74442414-74442433 | None:intergenic | 25.0% |
| ! | AAAGCAAAAAGATAGAACAA+AGG | + | chr5.3:74445367-74445386 | None:intergenic | 25.0% |
| ! | AATTAATGGTTTCTGATTGA+TGG | - | chr5.3:74442965-74442984 | MS.gene017190:intron | 25.0% |
| ! | AATTCAATACACAATCAGAT+TGG | + | chr5.3:74441808-74441827 | None:intergenic | 25.0% |
| ! | ACAATTTATTGCAAGTACAA+AGG | + | chr5.3:74443931-74443950 | None:intergenic | 25.0% |
| ! | ACGAAGTTTCAAATACTAAA+GGG | + | chr5.3:74442910-74442929 | None:intergenic | 25.0% |
| ! | AGATAAAAAGGAAAATGAAC+AGG | + | chr5.3:74446278-74446297 | None:intergenic | 25.0% |
| ! | AGTAAAATAACTTCTGAACA+TGG | + | chr5.3:74442590-74442609 | None:intergenic | 25.0% |
| ! | ATTATAAAACTGACAACTTG+TGG | + | chr5.3:74445691-74445710 | None:intergenic | 25.0% |
| ! | CAACATTAAAACAATTAGCA+CGG | + | chr5.3:74444025-74444044 | None:intergenic | 25.0% |
| ! | CATCAACAAAAATAGGAATT+GGG | + | chr5.3:74442024-74442043 | None:intergenic | 25.0% |
| ! | CATCAATAAAAATAAGAGCT+GGG | + | chr5.3:74441972-74441991 | None:intergenic | 25.0% |
| ! | CCTATAGAAGATAAGAAAAT+CGG | - | chr5.3:74444108-74444127 | MS.gene017190:intron | 25.0% |
| ! | CTATAGAAGATAAGAAAATC+GGG | - | chr5.3:74444109-74444128 | MS.gene017190:intron | 25.0% |
| ! | CTATATAATGAAAAAGCAAC+TGG | + | chr5.3:74445242-74445261 | None:intergenic | 25.0% |
| ! | GATAAAAAGGAAAATGAACA+GGG | + | chr5.3:74446277-74446296 | None:intergenic | 25.0% |
| ! | GATACAATCAAAGAAAAACA+AGG | + | chr5.3:74442805-74442824 | None:intergenic | 25.0% |
| ! | GCATCAATAAAAATAAGAAC+TGG | + | chr5.3:74442127-74442146 | None:intergenic | 25.0% |
| ! | GCATCAATAAAAATAGGAAT+TGG | + | chr5.3:74441869-74441888 | None:intergenic | 25.0% |
| ! | GTAAAATAACTTCTGAACAT+GGG | + | chr5.3:74442589-74442608 | None:intergenic | 25.0% |
| ! | TACACAAATTCAATTTAAGG+TGG | + | chr5.3:74443778-74443797 | None:intergenic | 25.0% |
| ! | TCATCAATAAAAATAAGAGC+TGG | + | chr5.3:74441973-74441992 | None:intergenic | 25.0% |
| ! | TGAAGAATACCAAGATAAAA+AGG | + | chr5.3:74446290-74446309 | None:intergenic | 25.0% |
| ! | TGATATTTACTGCTATTGAT+AGG | - | chr5.3:74445712-74445731 | MS.gene017190:CDS | 25.0% |
| ! | TGGAAAAGTTTGTAAAAAAG+AGG | + | chr5.3:74445111-74445130 | None:intergenic | 25.0% |
| ! | TTTATGATTTCAGAAAAGAG+TGG | - | chr5.3:74446191-74446210 | MS.gene017190:intron | 25.0% |
| ! | TTTATTCAAAATAAGAAGGG+TGG | - | chr5.3:74442988-74443007 | MS.gene017190:intron | 25.0% |
| ! | TTTATTTATTCCTCCAACAT+TGG | - | chr5.3:74442448-74442467 | MS.gene017190:intron | 25.0% |
| ! | TTTGAGAAGACAAAAGATTA+AGG | - | chr5.3:74446359-74446378 | MS.gene017190:CDS | 25.0% |
| !! | ACACAAATTCAATTTAAGGT+GGG | + | chr5.3:74443777-74443796 | None:intergenic | 25.0% |
| !! | ACTAATTTGTATACCAATGT+TGG | + | chr5.3:74442464-74442483 | None:intergenic | 25.0% |
| !! | CCAATCTTGAAAAAGTTTTA+AGG | - | chr5.3:74444280-74444299 | MS.gene017190:intron | 25.0% |
| !! | GCAATCTAATTTTCATCAAT+GGG | - | chr5.3:74442279-74442298 | MS.gene017190:CDS | 25.0% |
| !! | GTTCATTTTCCTTTTTATCT+TGG | - | chr5.3:74446278-74446297 | MS.gene017190:intron | 25.0% |
| !! | TGCAATCTAATTTTCATCAA+TGG | - | chr5.3:74442278-74442297 | MS.gene017190:CDS | 25.0% |
| !! | TTTAGTATTTGAAACTTCGT+CGG | - | chr5.3:74442910-74442929 | MS.gene017190:intron | 25.0% |
| !! | TTTGTTGAGATATAGCTTTT+GGG | - | chr5.3:74444741-74444760 | MS.gene017190:CDS | 25.0% |
| !! | TTTTGTTGAGATATAGCTTT+TGG | - | chr5.3:74444740-74444759 | MS.gene017190:CDS | 25.0% |
| !!! | ATGCAAAGTTTTGATATTTG+AGG | - | chr5.3:74442096-74442115 | MS.gene017190:intron | 25.0% |
| !!! | ATTGTTTTACTTTGTTTGTG+GGG | - | chr5.3:74445314-74445333 | MS.gene017190:intron | 25.0% |
| !!! | CCTTAAAACTTTTTCAAGAT+TGG | + | chr5.3:74444283-74444302 | None:intergenic | 25.0% |
| !!! | TACAAAAAAGTGTCCATAAT+TGG | + | chr5.3:74443821-74443840 | None:intergenic | 25.0% |
| AAGAAAAAATCAACGCAAAC+AGG | + | chr5.3:74444694-74444713 | None:intergenic | 30.0% | |
| AAGAAGTGAAGTTAATAGAG+TGG | - | chr5.3:74445518-74445537 | MS.gene017190:intron | 30.0% | |
| AATAAGAAGGGTGGTAAAAA+TGG | - | chr5.3:74442997-74443016 | MS.gene017190:intron | 30.0% | |
| AATATCAGGGACTGAATTAA+TGG | - | chr5.3:74442951-74442970 | MS.gene017190:intron | 30.0% | |
| AATCAAAGAAAAACAAGGCT+GGG | + | chr5.3:74442800-74442819 | None:intergenic | 30.0% | |
| AATCTCTCAGCAATAAAATC+AGG | + | chr5.3:74445957-74445976 | None:intergenic | 30.0% | |
| AATTTGTATACCAATGTTGG+AGG | + | chr5.3:74442461-74442480 | None:intergenic | 30.0% | |
| ACAATGTTCAAGTATTTAGG+TGG | - | chr5.3:74444186-74444205 | MS.gene017190:intron | 30.0% | |
| ACACAACAAAAATATGCAGA+AGG | + | chr5.3:74444785-74444804 | None:intergenic | 30.0% | |
| ACCTATGTCAAACTTTAACA+AGG | - | chr5.3:74443336-74443355 | MS.gene017190:intron | 30.0% | |
| AGAAAAAATCAACGCAAACA+GGG | + | chr5.3:74444693-74444712 | None:intergenic | 30.0% | |
| AGTTATTAAACACGCACTTA+AGG | - | chr5.3:74442514-74442533 | MS.gene017190:intron | 30.0% | |
| AGTTTAAGTGTACAGAGAAT+CGG | - | chr5.3:74445762-74445781 | MS.gene017190:intron | 30.0% | |
| ATCAACAAAAAAAGGGAACT+GGG | + | chr5.3:74441920-74441939 | None:intergenic | 30.0% | |
| CAAAATCATGCAGAGATAAT+TGG | + | chr5.3:74445131-74445150 | None:intergenic | 30.0% | |
| CTTGGTTGTAAATGCAAAAA+GGG | - | chr5.3:74446329-74446348 | MS.gene017190:CDS | 30.0% | |
| GAAAAGATTCTAGATGAACT+GGG | - | chr5.3:74446014-74446033 | MS.gene017190:intron | 30.0% | |
| GAAAGGAAATCTAATATCTG+TGG | + | chr5.3:74443423-74443442 | None:intergenic | 30.0% | |
| GACGAAGTTTCAAATACTAA+AGG | + | chr5.3:74442911-74442930 | None:intergenic | 30.0% | |
| GCATCAACAAAAATAGGAAT+TGG | + | chr5.3:74442025-74442044 | None:intergenic | 30.0% | |
| GCATTGCATCAACAAAAAAA+GGG | + | chr5.3:74441927-74441946 | None:intergenic | 30.0% | |
| GCTGGTAATAAAGATATGAA+TGG | - | chr5.3:74446122-74446141 | MS.gene017190:intron | 30.0% | |
| GGAAAGAATAGTATAAACTC+TGG | - | chr5.3:74444130-74444149 | MS.gene017190:intron | 30.0% | |
| GTGATATCAAACTCCAATTA+TGG | - | chr5.3:74443805-74443824 | MS.gene017190:intron | 30.0% | |
| TAAATGAACAGCTGTAGATT+AGG | + | chr5.3:74443391-74443410 | None:intergenic | 30.0% | |
| TCATAGAATCAGAATCAGAT+AGG | - | chr5.3:74443685-74443704 | MS.gene017190:intron | 30.0% | |
| TCCCTAACATCTTAATATCA+GGG | - | chr5.3:74442938-74442957 | MS.gene017190:intron | 30.0% | |
| TCCCTGATATTAAGATGTTA+GGG | + | chr5.3:74442942-74442961 | None:intergenic | 30.0% | |
| TCTTCTTTGACAACGTAAAA+TGG | + | chr5.3:74441675-74441694 | None:intergenic | 30.0% | |
| TCTTGGTTGTAAATGCAAAA+AGG | - | chr5.3:74446328-74446347 | MS.gene017190:CDS | 30.0% | |
| TGAGATGGAAAATATTCTCT+TGG | - | chr5.3:74443841-74443860 | MS.gene017190:intron | 30.0% | |
| TGCAATGCATCAACAAAAAT+AGG | + | chr5.3:74442031-74442050 | None:intergenic | 30.0% | |
| TGCATTGCATCAACAAAAAA+AGG | + | chr5.3:74441928-74441947 | None:intergenic | 30.0% | |
| TGCATTGCATCAACAAAAAT+GGG | + | chr5.3:74442081-74442100 | None:intergenic | 30.0% | |
| TTCTAACAATTGCGAAATGA+AGG | + | chr5.3:74441729-74441748 | None:intergenic | 30.0% | |
| TTGCATTGCATCAACAAAAA+TGG | + | chr5.3:74441929-74441948 | None:intergenic | 30.0% | |
| TTTCTTGGTTACAAAAGGAA+AGG | + | chr5.3:74443440-74443459 | None:intergenic | 30.0% | |
| ! | AACTGTTTTGCATTACAACA+AGG | + | chr5.3:74444814-74444833 | None:intergenic | 30.0% |
| ! | ATCTTTTGTCTTCTCAAACT+TGG | + | chr5.3:74446357-74446376 | None:intergenic | 30.0% |
| ! | CATAATGGAAGCCTTAATTA+GGG | + | chr5.3:74444886-74444905 | None:intergenic | 30.0% |
| ! | CCGATTTTCTTATCTTCTAT+AGG | + | chr5.3:74444111-74444130 | None:intergenic | 30.0% |
| ! | TCAAGTATTTAGGTGGTTTT+TGG | - | chr5.3:74444193-74444212 | MS.gene017190:intron | 30.0% |
| ! | TCATAATGGAAGCCTTAATT+AGG | + | chr5.3:74444887-74444906 | None:intergenic | 30.0% |
| ! | TTGTTGAGATATAGCTTTTG+GGG | - | chr5.3:74444742-74444761 | MS.gene017190:CDS | 30.0% |
| ! | TTTTATGTGGCAAGATTGAT+AGG | - | chr5.3:74442254-74442273 | MS.gene017190:CDS | 30.0% |
| !! | CTCTCTGATTTTAATATTGC+TGG | - | chr5.3:74446104-74446123 | MS.gene017190:intron | 30.0% |
| !! | TGACATAGGTTATTTTACCT+GGG | + | chr5.3:74443326-74443345 | None:intergenic | 30.0% |
| !! | TGCATATTTTTGTTGTGTGT+GGG | - | chr5.3:74444787-74444806 | MS.gene017190:CDS | 30.0% |
| !! | TTGACATAGGTTATTTTACC+TGG | + | chr5.3:74443327-74443346 | None:intergenic | 30.0% |
| !!! | TGCGTTGATTTTTTCTTACT+TGG | - | chr5.3:74444697-74444716 | MS.gene017190:intron | 30.0% |
| AAAGAACATCCATTCCTAGA+AGG | + | chr5.3:74445661-74445680 | None:intergenic | 35.0% | |
| ACAACTCATGCTAGTATAAG+TGG | - | chr5.3:74443576-74443595 | MS.gene017190:intron | 35.0% | |
| ACTTAAGGTATGTCTGAGTT+TGG | - | chr5.3:74442529-74442548 | MS.gene017190:intron | 35.0% | |
| AGACTGAGAAACTGTATTGA+AGG | + | chr5.3:74444638-74444657 | None:intergenic | 35.0% | |
| AGCATTGCTAATATTTGACG+TGG | - | chr5.3:74443127-74443146 | MS.gene017190:intron | 35.0% | |
| AGTACAAAGGATCTTACATC+TGG | + | chr5.3:74443918-74443937 | None:intergenic | 35.0% | |
| AGTTTGAACAGATTGTATCG+CGG | + | chr5.3:74443164-74443183 | None:intergenic | 35.0% | |
| ATCAAAGAAAAACAAGGCTG+GGG | + | chr5.3:74442799-74442818 | None:intergenic | 35.0% | |
| ATGAAGTGGAGATTGAAAAC+CGG | - | chr5.3:74443275-74443294 | MS.gene017190:intron | 35.0% | |
| ATGGAGTCTAGTGAAAATGT+TGG | - | chr5.3:74443016-74443035 | MS.gene017190:intron | 35.0% | |
| ATTTCAGAAAAGAGTGGCAA+TGG | - | chr5.3:74446197-74446216 | MS.gene017190:intron | 35.0% | |
| CAACTCATGCTAGTATAAGT+GGG | - | chr5.3:74443577-74443596 | MS.gene017190:intron | 35.0% | |
| CAATCAAAGAAAAACAAGGC+TGG | + | chr5.3:74442801-74442820 | None:intergenic | 35.0% | |
| CATAGTTACAGATCAGAACT+GGG | + | chr5.3:74442180-74442199 | None:intergenic | 35.0% | |
| CATCAACAAAAAAAGGGAAC+TGG | + | chr5.3:74441921-74441940 | None:intergenic | 35.0% | |
| CATCAACAAAAATGGGAACT+GGG | + | chr5.3:74442074-74442093 | None:intergenic | 35.0% | |
| CTCTTTACTACACTGTTGAA+TGG | - | chr5.3:74445178-74445197 | MS.gene017190:intron | 35.0% | |
| CTTCTGTTGAAAACACTTGA+AGG | + | chr5.3:74445912-74445931 | None:intergenic | 35.0% | |
| GGAAAAGATTCTAGATGAAC+TGG | - | chr5.3:74446013-74446032 | MS.gene017190:intron | 35.0% | |
| GTCAAACTTTAACAAGGCTA+AGG | - | chr5.3:74443342-74443361 | MS.gene017190:intron | 35.0% | |
| GTCCCTAACATCTTAATATC+AGG | - | chr5.3:74442937-74442956 | MS.gene017190:intron | 35.0% | |
| GTCCCTGATATTAAGATGTT+AGG | + | chr5.3:74442943-74442962 | None:intergenic | 35.0% | |
| TAAAATGGATCTTGAGCTGA+GGG | + | chr5.3:74441660-74441679 | None:intergenic | 35.0% | |
| TAATGCAAAACAGTTGCTGT+TGG | - | chr5.3:74444819-74444838 | MS.gene017190:intron | 35.0% | |
| TACATTGACCAAATTGTGGA+AGG | + | chr5.3:74442410-74442429 | None:intergenic | 35.0% | |
| TACTGTTGAAAATCAACTGC+AGG | + | chr5.3:74445214-74445233 | None:intergenic | 35.0% | |
| TATAATGCACTCTGCTTAAG+AGG | + | chr5.3:74443882-74443901 | None:intergenic | 35.0% | |
| TATCTCAACAAAAGAAGCCA+CGG | + | chr5.3:74444733-74444752 | None:intergenic | 35.0% | |
| TCATAGTTACAGATCAGAAC+TGG | + | chr5.3:74442181-74442200 | None:intergenic | 35.0% | |
| TGAACATGTGTGATAAAGAG+AGG | + | chr5.3:74443108-74443127 | None:intergenic | 35.0% | |
| TGAGCATTTGAACCTTTCAA+AGG | - | chr5.3:74442321-74442340 | MS.gene017190:intron | 35.0% | |
| TGATAGAAAGGTGGATGAAT+TGG | - | chr5.3:74443204-74443223 | MS.gene017190:intron | 35.0% | |
| TGGATCATGCAATAAAGTGA+TGG | + | chr5.3:74441788-74441807 | None:intergenic | 35.0% | |
| TGTCAAAATCTTGATGCTTC+AGG | - | chr5.3:74445992-74446011 | MS.gene017190:intron | 35.0% | |
| TTAAGGCTTCCATTATGAGT+TGG | - | chr5.3:74444889-74444908 | MS.gene017190:intron | 35.0% | |
| TTGGACAAAATCTAGACGAT+TGG | + | chr5.3:74446060-74446079 | None:intergenic | 35.0% | |
| ! | AACAATTAGCACGGATTACA+AGG | + | chr5.3:74444016-74444035 | None:intergenic | 35.0% |
| ! | AATGCAAAACAGTTGCTGTT+GGG | - | chr5.3:74444820-74444839 | MS.gene017190:intron | 35.0% |
| ! | GCCTTGTTAAAGTTTGACAT+AGG | + | chr5.3:74443340-74443359 | None:intergenic | 35.0% |
| ! | TGTTGAGATATAGCTTTTGG+GGG | - | chr5.3:74444743-74444762 | MS.gene017190:CDS | 35.0% |
| ! | TTCAAAAGTTTGAGGTGCAT+GGG | + | chr5.3:74444966-74444985 | None:intergenic | 35.0% |
| ! | TTTACTTTGTTTGTGGGGTT+GGG | - | chr5.3:74445319-74445338 | MS.gene017190:intron | 35.0% |
| ! | TTTCAAAAGTTTGAGGTGCA+TGG | + | chr5.3:74444967-74444986 | None:intergenic | 35.0% |
| !! | CTGCATATTTTTGTTGTGTG+TGG | - | chr5.3:74444786-74444805 | MS.gene017190:CDS | 35.0% |
| !! | GCTTTGAAAAGTAGTAGACT+AGG | - | chr5.3:74445865-74445884 | MS.gene017190:intron | 35.0% |
| !! | TTTTACTTTGTTTGTGGGGT+TGG | - | chr5.3:74445318-74445337 | MS.gene017190:intron | 35.0% |
| !!! | GGACACTTTTTTGTATGAGA+TGG | - | chr5.3:74443826-74443845 | MS.gene017190:intron | 35.0% |
| AAAACAATGTCGCACAGGAA+CGG | + | chr5.3:74444483-74444502 | None:intergenic | 40.0% | |
| AAAACAGAAAACCACCTACG+AGG | - | chr5.3:74445625-74445644 | MS.gene017190:intron | 40.0% | |
| AAGTCTAACCAATATGCCTC+TGG | - | chr5.3:74443648-74443667 | MS.gene017190:intron | 40.0% | |
| ACAATACATGAAGAGCTCCT+TGG | - | chr5.3:74445798-74445817 | MS.gene017190:intron | 40.0% | |
| AGATGAACTGGGAAATGAGA+TGG | - | chr5.3:74446025-74446044 | MS.gene017190:intron | 40.0% | |
| AGTCTAACCAATATGCCTCT+GGG | - | chr5.3:74443649-74443668 | MS.gene017190:intron | 40.0% | |
| ATCTCAACAAAAGAAGCCAC+GGG | + | chr5.3:74444732-74444751 | None:intergenic | 40.0% | |
| ATTAAGAGAACAGTGGAAGC+TGG | - | chr5.3:74443537-74443556 | MS.gene017190:intron | 40.0% | |
| ATTATGCTCAACAGTGTGAC+TGG | - | chr5.3:74445030-74445049 | MS.gene017190:intron | 40.0% | |
| CAAGACATTCAGAAACGACT+AGG | + | chr5.3:74446313-74446332 | None:intergenic | 40.0% | |
| CAATACATGAAGAGCTCCTT+GGG | - | chr5.3:74445799-74445818 | MS.gene017190:intron | 40.0% | |
| CAGAGAGCAAAATCCAAAAG+CGG | + | chr5.3:74446091-74446110 | None:intergenic | 40.0% | |
| CAGCAAGAACTTCCTTTGAA+AGG | + | chr5.3:74442336-74442355 | None:intergenic | 40.0% | |
| CAGCAGATAGAGAAAAGGAA+TGG | + | chr5.3:74443473-74443492 | None:intergenic | 40.0% | |
| CTAGTCGTTTCTGAATGTCT+TGG | - | chr5.3:74446311-74446330 | MS.gene017190:intron | 40.0% | |
| GAAATCATCATTATCCCCAG+AGG | + | chr5.3:74443667-74443686 | None:intergenic | 40.0% | |
| GACGTACTTTGATGAGAATC+TGG | + | chr5.3:74443627-74443646 | None:intergenic | 40.0% | |
| GCATCAACAAAAATGGGAAC+TGG | + | chr5.3:74442075-74442094 | None:intergenic | 40.0% | |
| GCGTCAAAAGAGAATACACA+CGG | + | chr5.3:74444382-74444401 | None:intergenic | 40.0% | |
| GGAGTTTAATCTAGATCAGC+CGG | - | chr5.3:74442550-74442569 | MS.gene017190:intron | 40.0% | |
| GTAAAATGGATCTTGAGCTG+AGG | + | chr5.3:74441661-74441680 | None:intergenic | 40.0% | |
| GTCCACAATTGTTCCAGTTA+CGG | - | chr5.3:74444447-74444466 | MS.gene017190:CDS | 40.0% | |
| TAGCATCTAGAGATCCTTCT+TGG | - | chr5.3:74443242-74443261 | MS.gene017190:intron | 40.0% | |
| TAGTATAAGTGGGATGCACA+GGG | - | chr5.3:74443587-74443606 | MS.gene017190:intron | 40.0% | |
| TAGTGAAGCCTTCCACAATT+TGG | - | chr5.3:74442399-74442418 | MS.gene017190:intron | 40.0% | |
| TATCATCGCTTGCATGAACT+GGG | - | chr5.3:74442484-74442503 | MS.gene017190:intron | 40.0% | |
| TCAAAAGAGAATACACACGG+TGG | + | chr5.3:74444379-74444398 | None:intergenic | 40.0% | |
| TCATCAATGCCATACCAAGA+AGG | + | chr5.3:74443259-74443278 | None:intergenic | 40.0% | |
| TCATGCAGCAGATAGAGAAA+AGG | + | chr5.3:74443478-74443497 | None:intergenic | 40.0% | |
| TCTAGAGATCCTTCTTGGTA+TGG | - | chr5.3:74443247-74443266 | MS.gene017190:intron | 40.0% | |
| TGCATCTCATGTTTAAGCCA+GGG | - | chr5.3:74444851-74444870 | MS.gene017190:intron | 40.0% | |
| TGGGAAAACACTTCTGATAC+TGG | - | chr5.3:74442298-74442317 | MS.gene017190:intron | 40.0% | |
| TTAAGTGTACAGAGAATCGG+AGG | - | chr5.3:74445765-74445784 | MS.gene017190:intron | 40.0% | |
| TTATCATCGCTTGCATGAAC+TGG | - | chr5.3:74442483-74442502 | MS.gene017190:intron | 40.0% | |
| ! | AAAACAGTTGCTGTTGGGTT+GGG | - | chr5.3:74444825-74444844 | MS.gene017190:intron | 40.0% |
| ! | GATGATGATATGTGGTTTGC+TGG | - | chr5.3:74446251-74446270 | MS.gene017190:intron | 40.0% |
| ! | TCCATTATGAGTTGGCAGTA+GGG | - | chr5.3:74444897-74444916 | MS.gene017190:intron | 40.0% |
| ! | TTCCATTATGAGTTGGCAGT+AGG | - | chr5.3:74444896-74444915 | MS.gene017190:intron | 40.0% |
| ! | TTTTCACCTTTCCTACCACA+GGG | + | chr5.3:74442832-74442851 | None:intergenic | 40.0% |
| ! | TTTTTCACCTTTCCTACCAC+AGG | + | chr5.3:74442833-74442852 | None:intergenic | 40.0% |
| !! | TTGGTATGGCATTGATGAAG+TGG | - | chr5.3:74443261-74443280 | MS.gene017190:intron | 40.0% |
| AAAGAAAAACAAGGCTGGGG+AGG | + | chr5.3:74442796-74442815 | None:intergenic | 45.0% | |
| AAGTGGAGATTGAAAACCGG+AGG | - | chr5.3:74443278-74443297 | MS.gene017190:intron | 45.0% | |
| AGAACAGTGGAAGCTGGAAA+GGG | - | chr5.3:74443543-74443562 | MS.gene017190:intron | 45.0% | |
| AGGAACGTTACTCACAGGAA+AGG | + | chr5.3:74444533-74444552 | None:intergenic | 45.0% | |
| ATATATCAGCTACCTGCCCA+AGG | + | chr5.3:74445818-74445837 | None:intergenic | 45.0% | |
| ATCTCATGTTTAAGCCAGGG+AGG | - | chr5.3:74444854-74444873 | MS.gene017190:intron | 45.0% | |
| ATGAAGAAGGCCAGTGCAAA+GGG | - | chr5.3:74446222-74446241 | MS.gene017190:intron | 45.0% | |
| CAATTGTGGACGAACGGAAA+TGG | + | chr5.3:74444438-74444457 | None:intergenic | 45.0% | |
| CATGTGTGATAAAGAGAGGC+TGG | + | chr5.3:74443104-74443123 | None:intergenic | 45.0% | |
| CTAGTATAAGTGGGATGCAC+AGG | - | chr5.3:74443586-74443605 | MS.gene017190:intron | 45.0% | |
| CTGCATCTCATGTTTAAGCC+AGG | - | chr5.3:74444850-74444869 | MS.gene017190:intron | 45.0% | |
| CTGGAACAATTGTGGACGAA+CGG | + | chr5.3:74444444-74444463 | None:intergenic | 45.0% | |
| GCGCACAATTAAGAGAACAG+TGG | - | chr5.3:74443530-74443549 | MS.gene017190:intron | 45.0% | |
| GGAGGGTGATTCCCTAATTA+AGG | - | chr5.3:74444872-74444891 | MS.gene017190:intron | 45.0% | |
| GGATGCACAGGGAATTAATG+AGG | - | chr5.3:74443598-74443617 | MS.gene017190:intron | 45.0% | |
| GGTCGATACAGTGAAGGTTA+CGG | + | chr5.3:74444584-74444603 | None:intergenic | 45.0% | |
| GTAGACTAAGTGTGTGCTTG+TGG | + | chr5.3:74443065-74443084 | None:intergenic | 45.0% | |
| GTCTAACCAATATGCCTCTG+GGG | - | chr5.3:74443650-74443669 | MS.gene017190:intron | 45.0% | |
| GTTTAATCTAGATCAGCCGG+AGG | - | chr5.3:74442553-74442572 | MS.gene017190:intron | 45.0% | |
| TAAGTGTGTGCTTGTGGAGT+TGG | + | chr5.3:74443059-74443078 | None:intergenic | 45.0% | |
| TACTGCTATTGATAGGCAGC+AGG | - | chr5.3:74445719-74445738 | MS.gene017190:CDS | 45.0% | |
| TACTTGGCATTGTTATCCCG+TGG | - | chr5.3:74444713-74444732 | MS.gene017190:CDS | 45.0% | |
| TCAACGCAAACAGGGTAACA+TGG | + | chr5.3:74444685-74444704 | None:intergenic | 45.0% | |
| TCCAAAAGCGGAAACTCACT+TGG | + | chr5.3:74446079-74446098 | None:intergenic | 45.0% | |
| TCCCTACTGCCAACTCATAA+TGG | + | chr5.3:74444901-74444920 | None:intergenic | 45.0% | |
| TCTCATGTTTAAGCCAGGGA+GGG | - | chr5.3:74444855-74444874 | MS.gene017190:intron | 45.0% | |
| TGCCGTAACTGGAACAATTG+TGG | + | chr5.3:74444452-74444471 | None:intergenic | 45.0% | |
| TTGATTGTATCCCTTCCCTG+TGG | - | chr5.3:74442814-74442833 | MS.gene017190:intron | 45.0% | |
| TTGCGCAACATCGTTTCTGT+CGG | - | chr5.3:74444502-74444521 | MS.gene017190:intron | 45.0% | |
| ! | AAACAGTTGCTGTTGGGTTG+GGG | - | chr5.3:74444826-74444845 | MS.gene017190:intron | 45.0% |
| ! | AAGGAAGTTCTTGCTGCTTG+TGG | - | chr5.3:74442340-74442359 | MS.gene017190:intron | 45.0% |
| ! | AGTGGCAATGGTGATGAAGA+AGG | - | chr5.3:74446209-74446228 | MS.gene017190:intron | 45.0% |
| ! | CAAAACAGTTGCTGTTGGGT+TGG | - | chr5.3:74444824-74444843 | MS.gene017190:intron | 45.0% |
| ! | CATTATCCCCAGAGGCATAT+TGG | + | chr5.3:74443659-74443678 | None:intergenic | 45.0% |
| ! | GGGCAGATGATGATGATATG+TGG | - | chr5.3:74446243-74446262 | MS.gene017190:intron | 45.0% |
| ! | TATGAGTTGGCAGTAGGGAA+GGG | - | chr5.3:74444902-74444921 | MS.gene017190:intron | 45.0% |
| ! | TCCAAGTGAGTTTCCGCTTT+TGG | - | chr5.3:74446075-74446094 | MS.gene017190:intron | 45.0% |
| ! | TTATGAGTTGGCAGTAGGGA+AGG | - | chr5.3:74444901-74444920 | MS.gene017190:intron | 45.0% |
| !! | CTGCTTGTGGAAGTATTGAG+TGG | - | chr5.3:74442353-74442372 | MS.gene017190:intron | 45.0% |
| !! | TAAAGCGTCGCACACAATGA+AGG | + | chr5.3:74444612-74444631 | None:intergenic | 45.0% |
| !! | TGAGATATAGCTTTTGGGGG+TGG | - | chr5.3:74444746-74444765 | MS.gene017190:CDS | 45.0% |
| !! | TTGTGGAAGTATTGAGTGGC+AGG | - | chr5.3:74442357-74442376 | MS.gene017190:intron | 45.0% |
| !! | TTGTGGGGTTGGGTTTGTTT+TGG | - | chr5.3:74445329-74445348 | MS.gene017190:intron | 45.0% |
| AATTAGGGAATCACCCTCCC+TGG | + | chr5.3:74444871-74444890 | None:intergenic | 50.0% | |
| ACCTTTCCTACCACAGGGAA+GGG | + | chr5.3:74442827-74442846 | None:intergenic | 50.0% | |
| AGATTGAAAACCGGAGGAGG+TGG | - | chr5.3:74443284-74443303 | MS.gene017190:intron | 50.0% | |
| CATGGGAAGATCACTTCCTC+CGG | + | chr5.3:74442572-74442591 | None:intergenic | 50.0% | |
| GAGAACAGTGGAAGCTGGAA+AGG | - | chr5.3:74443542-74443561 | MS.gene017190:intron | 50.0% | |
| GATGAAGAAGGCCAGTGCAA+AGG | - | chr5.3:74446221-74446240 | MS.gene017190:intron | 50.0% | |
| GCGCAAAAACAATGTCGCAC+AGG | + | chr5.3:74444488-74444507 | None:intergenic | 50.0% | |
| GTCGCACACAATGAAGGCTA+GGG | + | chr5.3:74444606-74444625 | None:intergenic | 50.0% | |
| TATTGATAGGCAGCAGGACG+AGG | - | chr5.3:74445725-74445744 | MS.gene017190:CDS | 50.0% | |
| TCGCACACAATGAAGGCTAG+GGG | + | chr5.3:74444605-74444624 | None:intergenic | 50.0% | |
| TGAAGAAGGCCAGTGCAAAG+GGG | - | chr5.3:74446223-74446242 | MS.gene017190:intron | 50.0% | |
| TGGAGATTGAAAACCGGAGG+AGG | - | chr5.3:74443281-74443300 | MS.gene017190:intron | 50.0% | |
| TGTGATAAAGAGAGGCTGGC+AGG | + | chr5.3:74443100-74443119 | None:intergenic | 50.0% | |
| TTGTATCCCTTCCCTGTGGT+AGG | - | chr5.3:74442818-74442837 | MS.gene017190:intron | 50.0% | |
| ! | GTACAGAGAATCGGAGGTGT+TGG | - | chr5.3:74445771-74445790 | MS.gene017190:intron | 50.0% |
| !! | AACAGTTGCTGTTGGGTTGG+GGG | - | chr5.3:74444827-74444846 | MS.gene017190:intron | 50.0% |
| AAAAACAAGGCTGGGGAGGC+GGG | + | chr5.3:74442792-74442811 | None:intergenic | 55.0% | |
| AACAGGGTAACATGGAGCGC+AGG | + | chr5.3:74444677-74444696 | None:intergenic | 55.0% | |
| AAGGTTACGGCATCACGAGC+AGG | + | chr5.3:74444571-74444590 | None:intergenic | 55.0% | |
| ACAATGTCGCACAGGAACGG+TGG | + | chr5.3:74444480-74444499 | None:intergenic | 55.0% | |
| ACATGAAGAGCTCCTTGGGC+AGG | - | chr5.3:74445803-74445822 | MS.gene017190:intron | 55.0% | |
| AGGTTACGGCATCACGAGCA+GGG | + | chr5.3:74444570-74444589 | None:intergenic | 55.0% | |
| CACCTTTCCTACCACAGGGA+AGG | + | chr5.3:74442828-74442847 | None:intergenic | 55.0% | |
| CATCATCTGCCCCTTTGCAC+TGG | + | chr5.3:74446235-74446254 | None:intergenic | 55.0% | |
| CCTGCAGGAACGTTACTCAC+AGG | + | chr5.3:74444538-74444557 | None:intergenic | 55.0% | |
| CCTGTGAGTAACGTTCCTGC+AGG | - | chr5.3:74444535-74444554 | MS.gene017190:intron | 55.0% | |
| CGTCGCACACAATGAAGGCT+AGG | + | chr5.3:74444607-74444626 | None:intergenic | 55.0% | |
| GAAAAACAAGGCTGGGGAGG+CGG | + | chr5.3:74442793-74442812 | None:intergenic | 55.0% | |
| GCTAGGGGTCGATACAGTGA+AGG | + | chr5.3:74444590-74444609 | None:intergenic | 55.0% | |
| GGTAACATGGAGCGCAGGAA+GGG | + | chr5.3:74444672-74444691 | None:intergenic | 55.0% | |
| GTGGACGAACGGAAATGGCA+GGG | + | chr5.3:74444433-74444452 | None:intergenic | 55.0% | |
| TCCCTTCCCTGTGGTAGGAA+AGG | - | chr5.3:74442823-74442842 | MS.gene017190:intron | 55.0% | |
| TGGACGAACGGAAATGGCAG+GGG | + | chr5.3:74444432-74444451 | None:intergenic | 55.0% | |
| TGTGGACGAACGGAAATGGC+AGG | + | chr5.3:74444434-74444453 | None:intergenic | 55.0% | |
| AAAACAAGGCTGGGGAGGCG+GGG | + | chr5.3:74442791-74442810 | None:intergenic | 60.0% | |
| AGCGCAGGAAGGGAATGGTG+TGG | + | chr5.3:74444662-74444681 | None:intergenic | 60.0% | |
| ATGTCGCACAGGAACGGTGG+CGG | + | chr5.3:74444477-74444496 | None:intergenic | 60.0% | |
| CATGGAGCGCAGGAAGGGAA+TGG | + | chr5.3:74444667-74444686 | None:intergenic | 60.0% | |
| CATTGCTGGTCCACCTCCTC+CGG | + | chr5.3:74443297-74443316 | None:intergenic | 60.0% | |
| GACGAACGGAAATGGCAGGG+GGG | + | chr5.3:74444430-74444449 | None:intergenic | 60.0% | |
| GGACGAACGGAAATGGCAGG+GGG | + | chr5.3:74444431-74444450 | None:intergenic | 60.0% | |
| GGGTAACATGGAGCGCAGGA+AGG | + | chr5.3:74444673-74444692 | None:intergenic | 60.0% | |
| TACGGCATCACGAGCAGGGA+AGG | + | chr5.3:74444566-74444585 | None:intergenic | 60.0% | |
| ! | TACCTGGGTGCGAGCATTGC+TGG | + | chr5.3:74443311-74443330 | None:intergenic | 60.0% |
| GACCAGCAATGCTCGCACCC+AGG | - | chr5.3:74443306-74443325 | MS.gene017190:intron | 65.0% | |
| AAGGCTGGGGAGGCGGGGAA+AGG | + | chr5.3:74442786-74442805 | None:intergenic | 70.0% | |
| GCAGGGAAGGCTGTGCCTGC+AGG | + | chr5.3:74444553-74444572 | None:intergenic | 70.0% | |
| ! | CGGTGGCGGCGTGCCGTAAC+TGG | + | chr5.3:74444463-74444482 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 74441654 | 74446379 | 74441654 | ID=MS.gene017190 |
| chr5.3 | mRNA | 74441654 | 74446379 | 74441654 | ID=MS.gene017190.t1;Parent=MS.gene017190 |
| chr5.3 | exon | 74446326 | 74446379 | 74446326 | ID=MS.gene017190.t1.exon1;Parent=MS.gene017190.t1 |
| chr5.3 | CDS | 74446326 | 74446379 | 74446326 | ID=cds.MS.gene017190.t1;Parent=MS.gene017190.t1 |
| chr5.3 | exon | 74445655 | 74445765 | 74445655 | ID=MS.gene017190.t1.exon2;Parent=MS.gene017190.t1 |
| chr5.3 | CDS | 74445655 | 74445765 | 74445655 | ID=cds.MS.gene017190.t1;Parent=MS.gene017190.t1 |
| chr5.3 | exon | 74444706 | 74444819 | 74444706 | ID=MS.gene017190.t1.exon3;Parent=MS.gene017190.t1 |
| chr5.3 | CDS | 74444706 | 74444819 | 74444706 | ID=cds.MS.gene017190.t1;Parent=MS.gene017190.t1 |
| chr5.3 | exon | 74444309 | 74444505 | 74444309 | ID=MS.gene017190.t1.exon4;Parent=MS.gene017190.t1 |
| chr5.3 | CDS | 74444309 | 74444505 | 74444309 | ID=cds.MS.gene017190.t1;Parent=MS.gene017190.t1 |
| chr5.3 | exon | 74442209 | 74442299 | 74442209 | ID=MS.gene017190.t1.exon5;Parent=MS.gene017190.t1 |
| chr5.3 | CDS | 74442209 | 74442299 | 74442209 | ID=cds.MS.gene017190.t1;Parent=MS.gene017190.t1 |
| chr5.3 | exon | 74441908 | 74442019 | 74441908 | ID=MS.gene017190.t1.exon6;Parent=MS.gene017190.t1 |
| chr5.3 | CDS | 74441908 | 74442019 | 74441908 | ID=cds.MS.gene017190.t1;Parent=MS.gene017190.t1 |
| chr5.3 | exon | 74441654 | 74441829 | 74441654 | ID=MS.gene017190.t1.exon7;Parent=MS.gene017190.t1 |
| chr5.3 | CDS | 74441654 | 74441829 | 74441654 | ID=cds.MS.gene017190.t1;Parent=MS.gene017190.t1 |
| Gene Sequence |
| Protein sequence |
