Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005292.t1 | XP_024638596.1 | 99.4 | 325 | 2 | 0 | 1 | 325 | 1 | 325 | 3.60E-165 | 590.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005292.t1 | Q9SUJ1 | 76.4 | 335 | 65 | 3 | 1 | 325 | 1 | 331 | 9.5e-130 | 464.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005292.t1 | A0A396JXD9 | 99.4 | 325 | 2 | 0 | 1 | 325 | 1 | 325 | 2.6e-165 | 590.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene65117 | MS.gene005292 | PPI |
| MS.gene005292 | MS.gene78212 | PPI |
| MS.gene013657 | MS.gene005292 | PPI |
| MS.gene02663 | MS.gene005292 | PPI |
| MS.gene66057 | MS.gene005292 | PPI |
| MS.gene005292 | MS.gene059227 | PPI |
| MS.gene005292 | MS.gene02757 | PPI |
| MS.gene005292 | MS.gene82750 | PPI |
| MS.gene005292 | MS.gene065513 | PPI |
| MS.gene052932 | MS.gene005292 | PPI |
| MS.gene005292 | MS.gene50365 | PPI |
| MS.gene005292 | MS.gene027060 | PPI |
| MS.gene22643 | MS.gene005292 | PPI |
| MS.gene005292 | MS.gene48916 | PPI |
| MS.gene005292 | MS.gene003352 | PPI |
| MS.gene77217 | MS.gene005292 | PPI |
| MS.gene038424 | MS.gene005292 | PPI |
| MS.gene45857 | MS.gene005292 | PPI |
| MS.gene90588 | MS.gene005292 | PPI |
| MS.gene005292 | MS.gene22645 | PPI |
| MS.gene48256 | MS.gene005292 | PPI |
| MS.gene005292 | MS.gene81965 | PPI |
| MS.gene005292 | MS.gene02144 | PPI |
| MS.gene005292 | MS.gene062285 | PPI |
| MS.gene005292 | MS.gene017190 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005292.t1 | MTR_1g083790 | 99.365 | 315 | 2 | 0 | 1 | 315 | 1 | 315 | 0.0 | 642 |
| MS.gene005292.t1 | MTR_7g109165 | 66.561 | 314 | 99 | 5 | 1 | 311 | 1 | 311 | 1.07e-135 | 391 |
| MS.gene005292.t1 | MTR_7g084590 | 25.097 | 259 | 157 | 7 | 83 | 320 | 21 | 263 | 1.63e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005292.t1 | AT3G05710 | 76.418 | 335 | 65 | 3 | 1 | 325 | 1 | 331 | 0.0 | 521 |
| MS.gene005292.t1 | AT3G05710 | 75.821 | 335 | 66 | 3 | 1 | 325 | 1 | 330 | 0.0 | 515 |
| MS.gene005292.t1 | AT5G26980 | 77.370 | 327 | 67 | 4 | 1 | 325 | 1 | 322 | 0.0 | 513 |
| MS.gene005292.t1 | AT5G26980 | 77.370 | 327 | 67 | 4 | 1 | 325 | 1 | 322 | 0.0 | 513 |
| MS.gene005292.t1 | AT5G26980 | 77.370 | 327 | 67 | 4 | 1 | 325 | 1 | 322 | 0.0 | 513 |
| MS.gene005292.t1 | AT4G02195 | 64.220 | 327 | 111 | 4 | 1 | 325 | 1 | 323 | 1.29e-151 | 428 |
Find 67 sgRNAs with CRISPR-Local
Find 319 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGACCTTCTGCAATTGTTTA+AGG | 0.154574 | 1.1:-62069914 | None:intergenic |
| GTTGGTTCTGTTAATCATTA+AGG | 0.187645 | 1.1:+62070101 | MS.gene005292:CDS |
| GGAGGCAGCCCCACAGTAAT+TGG | 0.282740 | 1.1:-62067426 | None:intergenic |
| GGCAGAGAGAACTCAGAAAA+AGG | 0.288965 | 1.1:+62070029 | MS.gene005292:intron |
| TATCATGTGCTTTGTTATGT+TGG | 0.361395 | 1.1:+62070083 | MS.gene005292:CDS |
| ATCTCCAAACGACGGCATTA+AGG | 0.369271 | 1.1:-62067538 | None:intergenic |
| CTGCGGAGACTTGCTTCTGC+AGG | 0.409691 | 1.1:+62067636 | MS.gene005292:CDS |
| AGATGATGACTTGGACAATA+TGG | 0.409826 | 1.1:+62069269 | MS.gene005292:CDS |
| TACCTCCTCTCGCGGTGGTC+CGG | 0.425809 | 1.1:+62065728 | MS.gene005292:CDS |
| TTCCATTCATGTTAATCTCC+AGG | 0.430908 | 1.1:-62069230 | None:intergenic |
| TGTGGGGCTGCCTCCAGCAT+GGG | 0.434854 | 1.1:+62067434 | MS.gene005292:CDS |
| CAACTTATTTGAAGCGCCTC+AGG | 0.446869 | 1.1:+62068711 | MS.gene005292:CDS |
| GTGCTGACCAATTCGATTAC+CGG | 0.448177 | 1.1:-62065747 | None:intergenic |
| AAGGCCTTAATGCCGTCGTT+TGG | 0.451834 | 1.1:+62067534 | MS.gene005292:CDS |
| CGAGCTTGCTCAGATTATGA+AGG | 0.465210 | 1.1:+62069719 | MS.gene005292:CDS |
| TAAGGCCTTCGCATGAGCCT+TGG | 0.469990 | 1.1:-62067520 | None:intergenic |
| CCGATGATCCTGGTGGTTCA+AGG | 0.471361 | 1.1:+62065811 | MS.gene005292:CDS |
| GGGGCTGCCTCCAGCATGGG+TGG | 0.473862 | 1.1:+62067437 | MS.gene005292:CDS |
| GGTTTAAATCCAATTACTGT+GGG | 0.477788 | 1.1:+62067417 | MS.gene005292:CDS |
| CGGTGGTCCGGTAATCGAAT+TGG | 0.480133 | 1.1:+62065740 | MS.gene005292:CDS |
| TGCTTCTGCAGGGCCTTCTG+AGG | 0.500982 | 1.1:+62067647 | MS.gene005292:CDS |
| AAGCGGAGCATAAGAGCGAT+TGG | 0.501678 | 1.1:-62065784 | None:intergenic |
| CTGTGGGGCTGCCTCCAGCA+TGG | 0.507201 | 1.1:+62067433 | MS.gene005292:CDS |
| TCAGATACATCCACCCATGC+TGG | 0.509293 | 1.1:-62067447 | None:intergenic |
| TGCGGAGACTTGCTTCTGCA+GGG | 0.519709 | 1.1:+62067637 | MS.gene005292:CDS |
| GCGAAGATGACGACGGAGCA+CGG | 0.523089 | 1.1:-62065698 | None:intergenic |
| CCGCTTAGTACCGATGATCC+TGG | 0.524029 | 1.1:+62065801 | MS.gene005292:CDS |
| CTTCTGAGGATTCCAATGTC+AGG | 0.540775 | 1.1:+62067661 | MS.gene005292:CDS |
| GCCGTCGTTTGGAGATGGTA+AGG | 0.544395 | 1.1:+62067545 | MS.gene005292:CDS |
| AGCGGAGCATAAGAGCGATT+GGG | 0.546694 | 1.1:-62065783 | None:intergenic |
| TTAATGCCGTCGTTTGGAGA+TGG | 0.553207 | 1.1:+62067540 | MS.gene005292:CDS |
| AACTGACTTGATAAAGAGAT+CGG | 0.558407 | 1.1:+62067605 | MS.gene005292:CDS |
| GGGTCAAGATGGAGTTGACC+TGG | 0.559696 | 1.1:+62069212 | MS.gene005292:intron |
| GATCTACAGAGAGGCTCTGA+AGG | 0.565812 | 1.1:-62068673 | None:intergenic |
| CCTTGAACCACCAGGATCAT+CGG | 0.569373 | 1.1:-62065811 | None:intergenic |
| GACCTGGAGATTAACATGAA+TGG | 0.572532 | 1.1:+62069228 | MS.gene005292:CDS |
| ACGATGATGCAGGGTCAAGA+TGG | 0.577379 | 1.1:+62069201 | MS.gene005292:intron |
| GATATTTAACGAGCATCAGA+TGG | 0.584575 | 1.1:+62069527 | MS.gene005292:intron |
| TAAATATGAAGATGATGACT+TGG | 0.585064 | 1.1:+62069260 | MS.gene005292:CDS |
| GGGTTTAAATCCAATTACTG+TGG | 0.588018 | 1.1:+62067416 | MS.gene005292:CDS |
| ATAGTCTATTCTATCAACAA+TGG | 0.590977 | 1.1:-62069856 | None:intergenic |
| GTTGTCCAAGGCTCATGCGA+AGG | 0.595799 | 1.1:+62067515 | MS.gene005292:CDS |
| AGACTATAACATTCAGAATG+TGG | 0.601971 | 1.1:+62069872 | MS.gene005292:CDS |
| CTGACATTGGAATCCTCAGA+AGG | 0.605361 | 1.1:-62067660 | None:intergenic |
| TACCGGACCACCGCGAGAGG+AGG | 0.619945 | 1.1:-62065730 | None:intergenic |
| TGGCCTTAAACAATTGCAGA+AGG | 0.633448 | 1.1:+62069911 | MS.gene005292:CDS |
| TTTAAGGCCATCCTCAACAG+TGG | 0.634395 | 1.1:-62069898 | None:intergenic |
| AAAGAGTACCTTGAACCACC+AGG | 0.637073 | 1.1:-62065819 | None:intergenic |
| GTGGCAACCACTGTTGAGGA+TGG | 0.644376 | 1.1:+62069891 | MS.gene005292:CDS |
| CTGTCTACCTCCTCTCGCGG+TGG | 0.646893 | 1.1:+62065723 | MS.gene005292:CDS |
| ATCAGTACTAGTCATAGACC+AGG | 0.646952 | 1.1:+62069746 | MS.gene005292:CDS |
| GAATGTGGCAACCACTGTTG+AGG | 0.651422 | 1.1:+62069887 | MS.gene005292:CDS |
| GATTACCGGACCACCGCGAG+AGG | 0.656759 | 1.1:-62065733 | None:intergenic |
| GATACATCCACCCATGCTGG+AGG | 0.661774 | 1.1:-62067444 | None:intergenic |
| TCGGAATCTGAATGGCGACG+AGG | 0.676673 | 1.1:+62065628 | None:intergenic |
| TTAGAGACTCAATAGCATGT+TGG | 0.680372 | 1.1:-62067572 | None:intergenic |
| AGAGATCGGAGAAGAGACTG+CGG | 0.681249 | 1.1:+62067619 | MS.gene005292:CDS |
| TCCTTACCATCTCCAAACGA+CGG | 0.691112 | 1.1:-62067546 | None:intergenic |
| CCAGGATCATCGGTACTAAG+CGG | 0.695962 | 1.1:-62065801 | None:intergenic |
| CCGCTGTCTACCTCCTCTCG+CGG | 0.701389 | 1.1:+62065720 | MS.gene005292:CDS |
| GTTTAAATCCAATTACTGTG+GGG | 0.707617 | 1.1:+62067418 | MS.gene005292:CDS |
| GCGATTGGGATTAAGAAGCG+AGG | 0.709817 | 1.1:-62065769 | None:intergenic |
| CTTAGTACCGATGATCCTGG+TGG | 0.710981 | 1.1:+62065804 | MS.gene005292:CDS |
| GACAGCGGCGAAGATGACGA+CGG | 0.727697 | 1.1:-62065705 | None:intergenic |
| CCGCGAGAGGAGGTAGACAG+CGG | 0.728811 | 1.1:-62065720 | None:intergenic |
| TCTTGCGAAGATCTACAGAG+AGG | 0.735622 | 1.1:-62068682 | None:intergenic |
| TATTGAGTCTCTAACACACG+AGG | 0.747213 | 1.1:+62067581 | MS.gene005292:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAAAATAAAATAACACA+CGG | - | chr1.1:62065929-62065948 | None:intergenic | 10.0% |
| !! | TATTAATAAATGAAAAATAG+TGG | - | chr1.1:62068773-62068792 | None:intergenic | 10.0% |
| !!! | AATAAAATTGCAATTTTTTT+AGG | + | chr1.1:62068798-62068817 | MS.gene005292:intron | 10.0% |
| !!! | ATAAAATTGCAATTTTTTTA+GGG | + | chr1.1:62068799-62068818 | MS.gene005292:intron | 10.0% |
| !!! | ATTTAATTTCATATTTTAAC+AGG | - | chr1.1:62066343-62066362 | None:intergenic | 10.0% |
| !!! | TATTTTATTCATCATTTTTT+GGG | + | chr1.1:62067231-62067250 | MS.gene005292:intron | 10.0% |
| !!! | TTATTTTATTCATCATTTTT+TGG | + | chr1.1:62067230-62067249 | MS.gene005292:intron | 10.0% |
| !! | AATATGAAATTAAATGCAAT+CGG | + | chr1.1:62066348-62066367 | MS.gene005292:intron | 15.0% |
| !! | ATATCTAGATATAAATGATT+TGG | - | chr1.1:62069512-62069531 | None:intergenic | 15.0% |
| !! | TCCAAATAAGAAAATATAAA+AGG | + | chr1.1:62067931-62067950 | MS.gene005292:intron | 15.0% |
| !! | TTTCACATAATACTTATAAA+TGG | + | chr1.1:62067715-62067734 | MS.gene005292:intron | 15.0% |
| !!! | ATGGTAATTATTTTGTTTAT+GGG | + | chr1.1:62070000-62070019 | MS.gene005292:intron | 15.0% |
| !!! | TAAAATTGCAATTTTTTTAG+GGG | + | chr1.1:62068800-62068819 | MS.gene005292:intron | 15.0% |
| !!! | TATGGTAATTATTTTGTTTA+TGG | + | chr1.1:62069999-62070018 | MS.gene005292:intron | 15.0% |
| !!! | TCCTTTTATATTTTCTTATT+TGG | - | chr1.1:62067935-62067954 | None:intergenic | 15.0% |
| !! | AAACACTAAAAAAAGAAACA+TGG | + | chr1.1:62067966-62067985 | MS.gene005292:intron | 20.0% |
| !! | AAATTAAAATGAGTCGAAAA+AGG | - | chr1.1:62068513-62068532 | None:intergenic | 20.0% |
| !! | AAATTAAGAGAAAAAAGATC+AGG | + | chr1.1:62066449-62066468 | MS.gene005292:intron | 20.0% |
| !! | AAATTTAGTTGACATTATTC+TGG | + | chr1.1:62068132-62068151 | MS.gene005292:intron | 20.0% |
| !! | AATCAAGTTAAAATCTTTGT+GGG | + | chr1.1:62067779-62067798 | MS.gene005292:intron | 20.0% |
| !! | AATCTATGTCAAAACAAAAA+TGG | + | chr1.1:62068451-62068470 | MS.gene005292:intron | 20.0% |
| !! | AGAATAATGTCAACTAAATT+TGG | - | chr1.1:62068133-62068152 | None:intergenic | 20.0% |
| !! | ATCAATCTAATTATTTGGAA+TGG | - | chr1.1:62066135-62066154 | None:intergenic | 20.0% |
| !! | TAATCAAGTTAAAATCTTTG+TGG | + | chr1.1:62067778-62067797 | MS.gene005292:intron | 20.0% |
| !! | TCGAGATCAAAATTAATAAT+AGG | + | chr1.1:62066836-62066855 | MS.gene005292:intron | 20.0% |
| !! | TTTAAGGAATATTATACTGA+AGG | + | chr1.1:62069074-62069093 | MS.gene005292:intron | 20.0% |
| !!! | ATTAATAATAGGTTTTCAGT+AGG | + | chr1.1:62066847-62066866 | MS.gene005292:intron | 20.0% |
| !!! | GTTTCTTTTTTTAGTGTTTA+TGG | - | chr1.1:62067965-62067984 | None:intergenic | 20.0% |
| !!! | TAGGATATTAATTGTTTTTG+CGG | + | chr1.1:62067384-62067403 | MS.gene005292:intron | 20.0% |
| !!! | TTTCGACTCATTTTAATTTA+TGG | + | chr1.1:62068514-62068533 | MS.gene005292:intron | 20.0% |
| ! | AAGAGAGAAATTATAATGAG+TGG | + | chr1.1:62067889-62067908 | MS.gene005292:intron | 25.0% |
| ! | AATAATAAGTCACAGAAACT+AGG | - | chr1.1:62068293-62068312 | None:intergenic | 25.0% |
| ! | AGAGAGAAATTATAATGAGT+GGG | + | chr1.1:62067890-62067909 | MS.gene005292:intron | 25.0% |
| ! | AGTACTCTAAATTTGAATTG+AGG | - | chr1.1:62068927-62068946 | None:intergenic | 25.0% |
| ! | AGTAGAAAAACAAGAGAAAA+AGG | - | chr1.1:62069938-62069957 | None:intergenic | 25.0% |
| ! | ATAGTCTATTCTATCAACAA+TGG | - | chr1.1:62069859-62069878 | None:intergenic | 25.0% |
| ! | ATATGAGACTTAGTAATTGT+AGG | + | chr1.1:62067365-62067384 | MS.gene005292:intron | 25.0% |
| ! | ATGAAAATCCATATACTTAG+TGG | - | chr1.1:62069178-62069197 | None:intergenic | 25.0% |
| ! | ATTGAAAGATGAAGTCATAT+TGG | + | chr1.1:62065998-62066017 | MS.gene005292:intron | 25.0% |
| ! | CAATTAATGATCAAAACTTC+CGG | - | chr1.1:62069405-62069424 | None:intergenic | 25.0% |
| ! | GATGGATCAATCTAATTATT+TGG | - | chr1.1:62066140-62066159 | None:intergenic | 25.0% |
| ! | GCTTCAAAACAATTGTATTT+AGG | + | chr1.1:62066191-62066210 | MS.gene005292:intron | 25.0% |
| ! | GTACTCTAAATTTGAATTGA+GGG | - | chr1.1:62068926-62068945 | None:intergenic | 25.0% |
| ! | GTGAATAAGTAGGTAATAAA+CGG | - | chr1.1:62069383-62069402 | None:intergenic | 25.0% |
| ! | TAAAAGTAAAGCAAAAGGAA+TGG | + | chr1.1:62067029-62067048 | MS.gene005292:intron | 25.0% |
| ! | TAAATATGAAGATGATGACT+TGG | + | chr1.1:62069260-62069279 | MS.gene005292:CDS | 25.0% |
| ! | TAAGTTCTCACTTACAATTA+AGG | + | chr1.1:62068477-62068496 | MS.gene005292:intron | 25.0% |
| ! | TACCATAAAAGTAAAGCAAA+AGG | + | chr1.1:62067024-62067043 | MS.gene005292:intron | 25.0% |
| ! | TCATTATATCCATCTATTAC+TGG | - | chr1.1:62067189-62067208 | None:intergenic | 25.0% |
| ! | TTAACAAAGCACAAAACTAA+GGG | - | chr1.1:62068338-62068357 | None:intergenic | 25.0% |
| ! | TTACACACAATCTAAAAAGA+TGG | - | chr1.1:62066158-62066177 | None:intergenic | 25.0% |
| ! | TTTAACAAAGCACAAAACTA+AGG | - | chr1.1:62068339-62068358 | None:intergenic | 25.0% |
| ! | TTTATTACCTACTTATTCAC+CGG | + | chr1.1:62069383-62069402 | MS.gene005292:intron | 25.0% |
| !!! | ATTTCATAAACAAGTATCGA+AGG | - | chr1.1:62067287-62067306 | None:intergenic | 25.0% |
| !!! | CTCTTGTTTTTCTACTATTT+TGG | + | chr1.1:62069942-62069961 | MS.gene005292:intron | 25.0% |
| !!! | TTCCTTTTGCTTTACTTTTA+TGG | - | chr1.1:62067029-62067048 | None:intergenic | 25.0% |
| !!! | TTTCATAAACAAGTATCGAA+GGG | - | chr1.1:62067286-62067305 | None:intergenic | 25.0% |
| AATATGATCATTCCATGTAC+TGG | + | chr1.1:62069439-62069458 | MS.gene005292:intron | 30.0% | |
| AATTAGAATTGCCTTGGAAA+GGG | + | chr1.1:62067254-62067273 | MS.gene005292:intron | 30.0% | |
| AATTGACATCCTCTATATAC+AGG | + | chr1.1:62069830-62069849 | MS.gene005292:intron | 30.0% | |
| ACTATAAGAGTGATCACATT+TGG | + | chr1.1:62065960-62065979 | MS.gene005292:intron | 30.0% | |
| AGACTATAACATTCAGAATG+TGG | + | chr1.1:62069872-62069891 | MS.gene005292:CDS | 30.0% | |
| AGATTCTTCCAACAACATAT+GGG | - | chr1.1:62068578-62068597 | None:intergenic | 30.0% | |
| ATCAGCATGTACATTTAGTT+AGG | - | chr1.1:62067143-62067162 | None:intergenic | 30.0% | |
| ATGAAATTAAATGCAATCGG+TGG | + | chr1.1:62066351-62066370 | MS.gene005292:intron | 30.0% | |
| ATTCTGACAATATCTCCATT+GGG | + | chr1.1:62066621-62066640 | MS.gene005292:intron | 30.0% | |
| ATTGACATCCTCTATATACA+GGG | + | chr1.1:62069831-62069850 | MS.gene005292:intron | 30.0% | |
| CTAAAATGTAACACACTTGA+AGG | - | chr1.1:62068158-62068177 | None:intergenic | 30.0% | |
| CTAAGGCAATAACTGAATTA+AGG | - | chr1.1:62066594-62066613 | None:intergenic | 30.0% | |
| GAGAGAAATTATAATGAGTG+GGG | + | chr1.1:62067891-62067910 | MS.gene005292:intron | 30.0% | |
| GGTTTAAATCCAATTACTGT+GGG | + | chr1.1:62067417-62067436 | MS.gene005292:CDS | 30.0% | |
| GTTACATACCACTAAGTATA+TGG | + | chr1.1:62069167-62069186 | MS.gene005292:intron | 30.0% | |
| GTTGTTGGAAGAATCTATAA+TGG | + | chr1.1:62068582-62068601 | MS.gene005292:intron | 30.0% | |
| GTTTAAATCCAATTACTGTG+GGG | + | chr1.1:62067418-62067437 | MS.gene005292:CDS | 30.0% | |
| TACAGTTTCTGTGAATATAC+TGG | - | chr1.1:62066073-62066092 | None:intergenic | 30.0% | |
| TAGATTCTTCCAACAACATA+TGG | - | chr1.1:62068579-62068598 | None:intergenic | 30.0% | |
| TCAGCATGTACATTTAGTTA+GGG | - | chr1.1:62067142-62067161 | None:intergenic | 30.0% | |
| TGAAATTAAATGCAATCGGT+GGG | + | chr1.1:62066352-62066371 | MS.gene005292:intron | 30.0% | |
| TTCACTATTAGCTGATGATT+GGG | - | chr1.1:62069024-62069043 | None:intergenic | 30.0% | |
| TTCTTATTCTTCGAAACCAT+TGG | + | chr1.1:62066801-62066820 | MS.gene005292:intron | 30.0% | |
| TTTCTCCGATTGCATTTAAA+GGG | - | chr1.1:62066426-62066445 | None:intergenic | 30.0% | |
| TTTCTGTGAATATACTGGTA+TGG | - | chr1.1:62066068-62066087 | None:intergenic | 30.0% | |
| ! | AGAGGATGTCAATTTTCATA+AGG | - | chr1.1:62069824-62069843 | None:intergenic | 30.0% |
| ! | GAGGATGTCAATTTTCATAA+GGG | - | chr1.1:62069823-62069842 | None:intergenic | 30.0% |
| ! | GCAGATATGTGTTTTATATG+TGG | - | chr1.1:62068061-62068080 | None:intergenic | 30.0% |
| ! | TATCATGTGCTTTGTTATGT+TGG | + | chr1.1:62070083-62070102 | MS.gene005292:CDS | 30.0% |
| ! | TCAATGCATCTCTGTATTTT+CGG | - | chr1.1:62065671-62065690 | None:intergenic | 30.0% |
| ! | TGAGCATTTTCTTATTCTGT+TGG | + | chr1.1:62068622-62068641 | MS.gene005292:intron | 30.0% |
| ! | TTTCATTTTACGATGATGCA+GGG | + | chr1.1:62069192-62069211 | MS.gene005292:intron | 30.0% |
| ! | TTTTCAGTAGGATGAAATAC+TGG | + | chr1.1:62066859-62066878 | MS.gene005292:intron | 30.0% |
| ! | TTTTCATTTTACGATGATGC+AGG | + | chr1.1:62069191-62069210 | MS.gene005292:intron | 30.0% |
| ! | TTTTCTCCGATTGCATTTAA+AGG | - | chr1.1:62066427-62066446 | None:intergenic | 30.0% |
| !! | AACTGACTTGATAAAGAGAT+CGG | + | chr1.1:62067605-62067624 | MS.gene005292:CDS | 30.0% |
| !! | CTCAATTGATTCACAGTTTT+TGG | + | chr1.1:62069664-62069683 | MS.gene005292:intron | 30.0% |
| !! | GTTGGTTCTGTTAATCATTA+AGG | + | chr1.1:62070101-62070120 | MS.gene005292:CDS | 30.0% |
| !! | TACTTGGCATTTTGCTTTTA+AGG | + | chr1.1:62069058-62069077 | MS.gene005292:intron | 30.0% |
| !!! | AGCTTCACTTTTTTTAAGCT+TGG | - | chr1.1:62069553-62069572 | None:intergenic | 30.0% |
| !!! | CAATTTTTTTAGGGGTTTAC+TGG | + | chr1.1:62068808-62068827 | MS.gene005292:intron | 30.0% |
| !!! | TGGTGATGCATTTTAGTTTT+TGG | + | chr1.1:62067735-62067754 | MS.gene005292:intron | 30.0% |
| !!! | TTTTTGGTGTTTGCTTTTAC+AGG | + | chr1.1:62069680-62069699 | MS.gene005292:intron | 30.0% |
| AAAAAGAGATCCAACAGGTA+AGG | + | chr1.1:62069589-62069608 | MS.gene005292:intron | 35.0% | |
| AAAACTTCCGGTGAATAAGT+AGG | - | chr1.1:62069393-62069412 | None:intergenic | 35.0% | |
| AAGAGAAAAAAGATCAGGAG+AGG | + | chr1.1:62066454-62066473 | MS.gene005292:intron | 35.0% | |
| AAGAGAAAAAGAGATCCAAC+AGG | + | chr1.1:62069584-62069603 | MS.gene005292:CDS | 35.0% | |
| AAGTAAAGCAAAAGGAATGG+AGG | + | chr1.1:62067032-62067051 | MS.gene005292:intron | 35.0% | |
| ACACCAAATAATCTGTTCTG+AGG | + | chr1.1:62068031-62068050 | MS.gene005292:intron | 35.0% | |
| AGTAGGTAATAAACGGCATA+AGG | - | chr1.1:62069376-62069395 | None:intergenic | 35.0% | |
| ATATCATACCAGTGATACCA+TGG | - | chr1.1:62067833-62067852 | None:intergenic | 35.0% | |
| ATCAGCTAATAGTGAACAAG+CGG | + | chr1.1:62069028-62069047 | MS.gene005292:intron | 35.0% | |
| ATGGATTCTCCATTCAAAAG+TGG | + | chr1.1:62067985-62068004 | MS.gene005292:intron | 35.0% | |
| ATTAGAATTGCCTTGGAAAG+GGG | + | chr1.1:62067255-62067274 | MS.gene005292:intron | 35.0% | |
| ATTCTCCATTCAAAAGTGGA+AGG | + | chr1.1:62067989-62068008 | MS.gene005292:intron | 35.0% | |
| CACAATCATCCAGTAATAGA+TGG | + | chr1.1:62067177-62067196 | MS.gene005292:intron | 35.0% | |
| CACCAAATAATCTGTTCTGA+GGG | + | chr1.1:62068032-62068051 | MS.gene005292:intron | 35.0% | |
| CTTATAAAGTGAACTTCGCA+AGG | + | chr1.1:62068189-62068208 | MS.gene005292:intron | 35.0% | |
| GAAAGATGAAGTCATATTGG+AGG | + | chr1.1:62066001-62066020 | MS.gene005292:intron | 35.0% | |
| GAAATTATAATGAGTGGGGT+AGG | + | chr1.1:62067895-62067914 | MS.gene005292:intron | 35.0% | |
| GAATTAGAATTGCCTTGGAA+AGG | + | chr1.1:62067253-62067272 | MS.gene005292:intron | 35.0% | |
| GATATTTAACGAGCATCAGA+TGG | + | chr1.1:62069527-62069546 | MS.gene005292:intron | 35.0% | |
| GATTCTGACAATATCTCCAT+TGG | + | chr1.1:62066620-62066639 | MS.gene005292:intron | 35.0% | |
| GATTTGGATTGCATTGTTGA+CGG | + | chr1.1:62066254-62066273 | MS.gene005292:intron | 35.0% | |
| GGGTTTAAATCCAATTACTG+TGG | + | chr1.1:62067416-62067435 | MS.gene005292:CDS | 35.0% | |
| GTAACATGTCATTGTCAGTT+GGG | - | chr1.1:62067116-62067135 | None:intergenic | 35.0% | |
| GTTCACTATTAGCTGATGAT+TGG | - | chr1.1:62069025-62069044 | None:intergenic | 35.0% | |
| TACCAAGCAGCACTAAAAAT+AGG | - | chr1.1:62068103-62068122 | None:intergenic | 35.0% | |
| TAGACTTTAAGTGGTTGAAG+TGG | + | chr1.1:62066689-62066708 | MS.gene005292:intron | 35.0% | |
| TGTAACATGTCATTGTCAGT+TGG | - | chr1.1:62067117-62067136 | None:intergenic | 35.0% | |
| TTAGAGACTCAATAGCATGT+TGG | - | chr1.1:62067575-62067594 | None:intergenic | 35.0% | |
| TTCAACCACTTAAAGTCTAC+AGG | - | chr1.1:62066688-62066707 | None:intergenic | 35.0% | |
| TTCACATGTATGCATGTTAC+AGG | + | chr1.1:62067340-62067359 | MS.gene005292:intron | 35.0% | |
| TTCCATTCATGTTAATCTCC+AGG | - | chr1.1:62069233-62069252 | None:intergenic | 35.0% | |
| TTTGGGAATTAGAATTGCCT+TGG | + | chr1.1:62067248-62067267 | MS.gene005292:intron | 35.0% | |
| ! | AGATGATGACTTGGACAATA+TGG | + | chr1.1:62069269-62069288 | MS.gene005292:CDS | 35.0% |
| ! | ATGGTATCAAATCTCCCTTT+TGG | - | chr1.1:62067010-62067029 | None:intergenic | 35.0% |
| ! | CATTTGTTCCTTGGCATTTT+TGG | + | chr1.1:62066961-62066980 | MS.gene005292:intron | 35.0% |
| ! | TGAAGGAAAGATTTTCCCAA+TGG | - | chr1.1:62066639-62066658 | None:intergenic | 35.0% |
| ! | TGCTACATTTTCAATCGTGA+TGG | - | chr1.1:62066903-62066922 | None:intergenic | 35.0% |
| ! | TGGTATCAAATCTCCCTTTT+GGG | - | chr1.1:62067009-62067028 | None:intergenic | 35.0% |
| ! | TGTCAATTTTCATAAGGGTG+TGG | - | chr1.1:62069818-62069837 | None:intergenic | 35.0% |
| !! | AAATGATTTGGTAGCATCAG+TGG | - | chr1.1:62069500-62069519 | None:intergenic | 35.0% |
| !! | TATTTTGTTTATGGGCATGC+AGG | + | chr1.1:62070008-62070027 | MS.gene005292:intron | 35.0% |
| !! | TGCAGAAATCAAGGCATTTT+TGG | - | chr1.1:62068555-62068574 | None:intergenic | 35.0% |
| !!! | ATCCTATTTTTAGTGCTGCT+TGG | + | chr1.1:62068098-62068117 | MS.gene005292:intron | 35.0% |
| !!! | CATATTTTAACAGGAGCTCA+TGG | - | chr1.1:62066334-62066353 | None:intergenic | 35.0% |
| !!! | GACTTGTCACTTTTTTTTCC+TGG | + | chr1.1:62068968-62068987 | MS.gene005292:intron | 35.0% |
| !!! | GTCACTTTTTTTTCCTGGTA+CGG | + | chr1.1:62068973-62068992 | MS.gene005292:intron | 35.0% |
| !!! | TCACTTTTTTTTCCTGGTAC+GGG | + | chr1.1:62068974-62068993 | MS.gene005292:intron | 35.0% |
| AAAAATGGCAGAGTTGTCCA+AGG | + | chr1.1:62067503-62067522 | MS.gene005292:CDS | 40.0% | |
| AACAAGCGGTGAAGTATACT+TGG | + | chr1.1:62069042-62069061 | MS.gene005292:intron | 40.0% | |
| AATGCCAAGGAACAAATGTG+TGG | - | chr1.1:62066959-62066978 | None:intergenic | 40.0% | |
| ACATATGGGTGCAGAAATCA+AGG | - | chr1.1:62068564-62068583 | None:intergenic | 40.0% | |
| AGAGAGCAAGGGAATAAGTA+AGG | - | chr1.1:62069115-62069134 | None:intergenic | 40.0% | |
| AGATTGAAGAGAACATGGAG+TGG | - | chr1.1:62068260-62068279 | None:intergenic | 40.0% | |
| ATCAGTACTAGTCATAGACC+AGG | + | chr1.1:62069746-62069765 | MS.gene005292:CDS | 40.0% | |
| ATTTCAGAAGTTGCACCTTC+TGG | + | chr1.1:62066926-62066945 | MS.gene005292:intron | 40.0% | |
| CAATGGTTCCCTGTATATAG+AGG | - | chr1.1:62069842-62069861 | None:intergenic | 40.0% | |
| CAATGTCAGGAAAAATGTGC+AGG | + | chr1.1:62067674-62067693 | MS.gene005292:CDS | 40.0% | |
| CACTTCCTGTAGACTTTAAG+TGG | + | chr1.1:62066680-62066699 | MS.gene005292:intron | 40.0% | |
| CTGAGCTTAAGATCCAAGAA+CGG | + | chr1.1:62066715-62066734 | MS.gene005292:intron | 40.0% | |
| GACCTGGAGATTAACATGAA+TGG | + | chr1.1:62069228-62069247 | MS.gene005292:CDS | 40.0% | |
| GAGGTGTGAAATCATCAATG+AGG | + | chr1.1:62066227-62066246 | MS.gene005292:intron | 40.0% | |
| GATTGAAGAGAACATGGAGT+GGG | - | chr1.1:62068259-62068278 | None:intergenic | 40.0% | |
| GCAGAGAGAACTCAGAAAAA+GGG | + | chr1.1:62070030-62070049 | MS.gene005292:CDS | 40.0% | |
| GGACCTTCTGCAATTGTTTA+AGG | - | chr1.1:62069917-62069936 | None:intergenic | 40.0% | |
| GGATGCCCTTTAAATGCAAT+CGG | + | chr1.1:62066418-62066437 | MS.gene005292:intron | 40.0% | |
| GTAATAACCTTGTCCGTTCT+TGG | - | chr1.1:62066731-62066750 | None:intergenic | 40.0% | |
| GTCAGAATTGCTGACAAAGT+TGG | - | chr1.1:62066564-62066583 | None:intergenic | 40.0% | |
| GTCCCTCAGAACAGATTATT+TGG | - | chr1.1:62068037-62068056 | None:intergenic | 40.0% | |
| GTCTAGTCCCATGGTATAAT+CGG | - | chr1.1:62066110-62066129 | None:intergenic | 40.0% | |
| GTGAAATCATCAATGAGGAG+CGG | + | chr1.1:62066232-62066251 | MS.gene005292:intron | 40.0% | |
| TATTGAGTCTCTAACACACG+AGG | + | chr1.1:62067581-62067600 | MS.gene005292:CDS | 40.0% | |
| TCGATTGATGAAGAGACCAA+TGG | - | chr1.1:62066820-62066839 | None:intergenic | 40.0% | |
| TTAAGATCCAAGAACGGACA+AGG | + | chr1.1:62066721-62066740 | MS.gene005292:intron | 40.0% | |
| TTATAATGAGTGGGGTAGGT+CGG | + | chr1.1:62067899-62067918 | MS.gene005292:intron | 40.0% | |
| TTTCTGCACCCATATGTTGT+TGG | + | chr1.1:62068567-62068586 | MS.gene005292:intron | 40.0% | |
| ! | ATACTGGTTGAAATCCGTGT+TGG | + | chr1.1:62066875-62066894 | MS.gene005292:intron | 40.0% |
| ! | ATCTCTTGCATTGAGTTGCA+TGG | + | chr1.1:62068368-62068387 | MS.gene005292:intron | 40.0% |
| ! | CTGCACATTTTTCCTGACAT+TGG | - | chr1.1:62067676-62067695 | None:intergenic | 40.0% |
| ! | GGTATCAAATCTCCCTTTTG+GGG | - | chr1.1:62067008-62067027 | None:intergenic | 40.0% |
| ! | TACTGGTTGAAATCCGTGTT+GGG | + | chr1.1:62066876-62066895 | MS.gene005292:intron | 40.0% |
| ! | TCTGTGTCTCTTTTGCTCTA+TGG | + | chr1.1:62069981-62070000 | MS.gene005292:intron | 40.0% |
| ! | TGCAACTTTTCCTTACCTGT+TGG | - | chr1.1:62069602-62069621 | None:intergenic | 40.0% |
| ! | TGGCCTTAAACAATTGCAGA+AGG | + | chr1.1:62069911-62069930 | MS.gene005292:CDS | 40.0% |
| ! | TTGCATTGAGTTGCATGGTT+GGG | + | chr1.1:62068373-62068392 | MS.gene005292:intron | 40.0% |
| ! | TTTTAACAGGAGCTCATGGT+GGG | - | chr1.1:62066330-62066349 | None:intergenic | 40.0% |
| !! | ATTTTAACAGGAGCTCATGG+TGG | - | chr1.1:62066331-62066350 | None:intergenic | 40.0% |
| !! | TGTTTTTGCGGATGCAGTAA+GGG | + | chr1.1:62067396-62067415 | MS.gene005292:intron | 40.0% |
| !! | TTCGTCCTTCCACTTTTGAA+TGG | - | chr1.1:62067997-62068016 | None:intergenic | 40.0% |
| !!! | TTGTTTTTGCGGATGCAGTA+AGG | + | chr1.1:62067395-62067414 | MS.gene005292:intron | 40.0% |
| AAAGTGAACTTCGCAAGGAG+AGG | + | chr1.1:62068194-62068213 | MS.gene005292:intron | 45.0% | |
| AACTCAGAAAAAGGGAGGCA+TGG | + | chr1.1:62070038-62070057 | MS.gene005292:CDS | 45.0% | |
| AACTTCGCAAGGAGAGGATT+AGG | + | chr1.1:62068200-62068219 | MS.gene005292:intron | 45.0% | |
| AAGGAACAAATGTGTGGAGC+TGG | - | chr1.1:62066953-62066972 | None:intergenic | 45.0% | |
| AAGGGAAAAACCCCTTTCCA+AGG | - | chr1.1:62067268-62067287 | None:intergenic | 45.0% | |
| ACCTTTGTGCTTCTCGTGAA+GGG | + | chr1.1:62069326-62069345 | MS.gene005292:intron | 45.0% | |
| AGCTCCACACATTTGTTCCT+TGG | + | chr1.1:62066952-62066971 | MS.gene005292:intron | 45.0% | |
| AGGAGAGAGAAAACTCCACA+TGG | + | chr1.1:62066510-62066529 | MS.gene005292:intron | 45.0% | |
| AGTCACAGAAACTAGGACAG+AGG | - | chr1.1:62068286-62068305 | None:intergenic | 45.0% | |
| AGTTGTTATCTCCTCGCAGA+AGG | - | chr1.1:62069786-62069805 | None:intergenic | 45.0% | |
| ATCATTCCATGTACTGGACG+TGG | + | chr1.1:62069445-62069464 | MS.gene005292:intron | 45.0% | |
| ATCTCCAAACGACGGCATTA+AGG | - | chr1.1:62067541-62067560 | None:intergenic | 45.0% | |
| CTAAACGAGTGACTCTACCA+TGG | + | chr1.1:62067813-62067832 | MS.gene005292:intron | 45.0% | |
| CTGACATTGGAATCCTCAGA+AGG | - | chr1.1:62067663-62067682 | None:intergenic | 45.0% | |
| CTTCAGATTCTTCCACACTC+CGG | + | chr1.1:62066654-62066673 | MS.gene005292:intron | 45.0% | |
| GACCAGTTTGATCCATGCTT+CGG | - | chr1.1:62066768-62066787 | None:intergenic | 45.0% | |
| GAGAGAACTCAGAAAAAGGG+AGG | + | chr1.1:62070033-62070052 | MS.gene005292:CDS | 45.0% | |
| GCAAGGAGAGGATTAGGAAA+AGG | + | chr1.1:62068206-62068225 | MS.gene005292:intron | 45.0% | |
| GGCAGAGAGAACTCAGAAAA+AGG | + | chr1.1:62070029-62070048 | MS.gene005292:intron | 45.0% | |
| GGTGGAGATTGAAGAGAACA+TGG | - | chr1.1:62068265-62068284 | None:intergenic | 45.0% | |
| TACCTTTGTGCTTCTCGTGA+AGG | + | chr1.1:62069325-62069344 | MS.gene005292:intron | 45.0% | |
| TCCTTACCATCTCCAAACGA+CGG | - | chr1.1:62067549-62067568 | None:intergenic | 45.0% | |
| TCTGAGAGAGGATATGCAGA+AGG | - | chr1.1:62066296-62066315 | None:intergenic | 45.0% | |
| TCTTGCGAAGATCTACAGAG+AGG | - | chr1.1:62068685-62068704 | None:intergenic | 45.0% | |
| TGACTCTACCATGGTATCAC+TGG | + | chr1.1:62067822-62067841 | MS.gene005292:intron | 45.0% | |
| TTAATGCCGTCGTTTGGAGA+TGG | + | chr1.1:62067540-62067559 | MS.gene005292:CDS | 45.0% | |
| TTGTCAGAATCGCTGAGCTA+AGG | - | chr1.1:62066611-62066630 | None:intergenic | 45.0% | |
| TTTAACAGGAGCTCATGGTG+GGG | - | chr1.1:62066329-62066348 | None:intergenic | 45.0% | |
| TTTAGGCTACGTACGATGAG+AGG | + | chr1.1:62066208-62066227 | MS.gene005292:intron | 45.0% | |
| ! | CAACTTATTTGAAGCGCCTC+AGG | + | chr1.1:62068711-62068730 | MS.gene005292:CDS | 45.0% |
| ! | CCATCTGCCGATTATACCAT+GGG | + | chr1.1:62066100-62066119 | MS.gene005292:intron | 45.0% |
| ! | CGAGCTTGCTCAGATTATGA+AGG | + | chr1.1:62069719-62069738 | MS.gene005292:CDS | 45.0% |
| ! | CTTCTGAGGATTCCAATGTC+AGG | + | chr1.1:62067661-62067680 | MS.gene005292:CDS | 45.0% |
| ! | CTTGCATTGAGTTGCATGGT+TGG | + | chr1.1:62068372-62068391 | MS.gene005292:intron | 45.0% |
| ! | GTGCTGACCAATTCGATTAC+CGG | - | chr1.1:62065750-62065769 | None:intergenic | 45.0% |
| ! | TCATCAATGAGGAGCGGATT+TGG | + | chr1.1:62066238-62066257 | MS.gene005292:intron | 45.0% |
| ! | TCCATCTGCCGATTATACCA+TGG | + | chr1.1:62066099-62066118 | MS.gene005292:intron | 45.0% |
| ! | TGCATTGAGTTGCATGGTTG+GGG | + | chr1.1:62068374-62068393 | MS.gene005292:intron | 45.0% |
| ! | TTTAAGGCCATCCTCAACAG+TGG | - | chr1.1:62069901-62069920 | None:intergenic | 45.0% |
| !! | AAAGAGTACCTTGAACCACC+AGG | - | chr1.1:62065822-62065841 | None:intergenic | 45.0% |
| !! | CCTTGGCATTTTTGGAAGCA+GGG | + | chr1.1:62066969-62066988 | MS.gene005292:intron | 45.0% |
| !! | GGGTTGACTTGAATAGAAGC+AGG | - | chr1.1:62068318-62068337 | None:intergenic | 45.0% |
| !! | TCCTTGGCATTTTTGGAAGC+AGG | + | chr1.1:62066968-62066987 | MS.gene005292:intron | 45.0% |
| AAGCGGAGCATAAGAGCGAT+TGG | - | chr1.1:62065787-62065806 | None:intergenic | 50.0% | |
| AAGGCCTTAATGCCGTCGTT+TGG | + | chr1.1:62067534-62067553 | MS.gene005292:CDS | 50.0% | |
| AATCGACCACGTCCAGTACA+TGG | - | chr1.1:62069454-62069473 | None:intergenic | 50.0% | |
| ACGATGATGCAGGGTCAAGA+TGG | + | chr1.1:62069201-62069220 | MS.gene005292:intron | 50.0% | |
| AGAGATCGGAGAAGAGACTG+CGG | + | chr1.1:62067619-62067638 | MS.gene005292:CDS | 50.0% | |
| AGCGGAGCATAAGAGCGATT+GGG | - | chr1.1:62065786-62065805 | None:intergenic | 50.0% | |
| AGCTCAGTTGCATTCGCTAG+TGG | - | chr1.1:62066540-62066559 | None:intergenic | 50.0% | |
| CACAGAAACTAGGACAGAGG+TGG | - | chr1.1:62068283-62068302 | None:intergenic | 50.0% | |
| CACCGAAGCATGGATCAAAC+TGG | + | chr1.1:62066763-62066782 | MS.gene005292:intron | 50.0% | |
| CAGGCAGCAAAAAGAGGTGA+GGG | + | chr1.1:62068730-62068749 | MS.gene005292:intron | 50.0% | |
| CCAGGATCATCGGTACTAAG+CGG | - | chr1.1:62065804-62065823 | None:intergenic | 50.0% | |
| CCCATGGTATAATCGGCAGA+TGG | - | chr1.1:62066103-62066122 | None:intergenic | 50.0% | |
| CCCTGCTTCCAAAAATGCCA+AGG | - | chr1.1:62066972-62066991 | None:intergenic | 50.0% | |
| CCTTGAACCACCAGGATCAT+CGG | - | chr1.1:62065814-62065833 | None:intergenic | 50.0% | |
| CCTTGCTCTCTGTCTCTTGT+CGG | + | chr1.1:62069124-62069143 | MS.gene005292:intron | 50.0% | |
| CCTTTGTGCTTCTCGTGAAG+GGG | + | chr1.1:62069327-62069346 | MS.gene005292:intron | 50.0% | |
| CGACAAGAGACAGAGAGCAA+GGG | - | chr1.1:62069126-62069145 | None:intergenic | 50.0% | |
| CGGAGTGTGGAAGAATCTGA+AGG | - | chr1.1:62066656-62066675 | None:intergenic | 50.0% | |
| CTAAAGCTCTCGCATGCACA+TGG | - | chr1.1:62066391-62066410 | None:intergenic | 50.0% | |
| CTTGCTCTCTGTCTCTTGTC+GGG | + | chr1.1:62069125-62069144 | MS.gene005292:intron | 50.0% | |
| CTTTGTGCTTCTCGTGAAGG+GGG | + | chr1.1:62069328-62069347 | MS.gene005292:intron | 50.0% | |
| GAATGTGGCAACCACTGTTG+AGG | + | chr1.1:62069887-62069906 | MS.gene005292:CDS | 50.0% | |
| GCAACGTGCACGCACAAAAA+TGG | + | chr1.1:62067488-62067507 | MS.gene005292:CDS | 50.0% | |
| GCAGCAAGAGAGTGAAGAGA+AGG | + | chr1.1:62066490-62066509 | MS.gene005292:intron | 50.0% | |
| GCGATTGGGATTAAGAAGCG+AGG | - | chr1.1:62065772-62065791 | None:intergenic | 50.0% | |
| GGAATGGTAGTCTAGTCCCA+TGG | - | chr1.1:62066119-62066138 | None:intergenic | 50.0% | |
| GGGAAAGAGATCTCGAGTCT+TGG | + | chr1.1:62068994-62069013 | MS.gene005292:intron | 50.0% | |
| GGTATAATCGGCAGATGGAG+AGG | - | chr1.1:62066098-62066117 | None:intergenic | 50.0% | |
| TCAGATACATCCACCCATGC+TGG | - | chr1.1:62067450-62067469 | None:intergenic | 50.0% | |
| TCAGGCAGCAAAAAGAGGTG+AGG | + | chr1.1:62068729-62068748 | MS.gene005292:intron | 50.0% | |
| TGATCCATGCTTCGGTGAGT+GGG | - | chr1.1:62066760-62066779 | None:intergenic | 50.0% | |
| TGTGCAGTAGTGCCCCAAAA+GGG | + | chr1.1:62066993-62067012 | MS.gene005292:intron | 50.0% | |
| TTAACAGGAGCTCATGGTGG+GGG | - | chr1.1:62066328-62066347 | None:intergenic | 50.0% | |
| TTATCTCCTCGCAGAAGGAG+AGG | - | chr1.1:62069781-62069800 | None:intergenic | 50.0% | |
| TTGATCCATGCTTCGGTGAG+TGG | - | chr1.1:62066761-62066780 | None:intergenic | 50.0% | |
| ! | GATCTACAGAGAGGCTCTGA+AGG | - | chr1.1:62068676-62068695 | None:intergenic | 50.0% |
| ! | TCACCTCTTTTTGCTGCCTG+AGG | - | chr1.1:62068730-62068749 | None:intergenic | 50.0% |
| ! | TGCGAGAGCTTTAGTGCACT+AGG | + | chr1.1:62066397-62066416 | MS.gene005292:intron | 50.0% |
| !! | AAGTCTACAGGAAGTGCTGC+CGG | - | chr1.1:62066676-62066695 | None:intergenic | 50.0% |
| !! | CAATCGTGATGGACCCAACA+CGG | - | chr1.1:62066892-62066911 | None:intergenic | 50.0% |
| !! | CTTAGTACCGATGATCCTGG+TGG | + | chr1.1:62065804-62065823 | MS.gene005292:CDS | 50.0% |
| AAGGAGAGGATCTGCTGACC+TGG | - | chr1.1:62069767-62069786 | None:intergenic | 55.0% | |
| ATGTGTGGAGCTGGACCAGA+AGG | - | chr1.1:62066944-62066963 | None:intergenic | 55.0% | |
| CAGTTGCATTCGCTAGTGGC+AGG | - | chr1.1:62066536-62066555 | None:intergenic | 55.0% | |
| CATGCACATGGTCCGGGAAA+GGG | - | chr1.1:62066379-62066398 | None:intergenic | 55.0% | |
| CATGCTTCGGTGAGTGGGAA+CGG | - | chr1.1:62066755-62066774 | None:intergenic | 55.0% | |
| CCGACAAGAGACAGAGAGCA+AGG | - | chr1.1:62069127-62069146 | None:intergenic | 55.0% | |
| CCGATGATCCTGGTGGTTCA+AGG | + | chr1.1:62065811-62065830 | MS.gene005292:CDS | 55.0% | |
| CGAGATCTCTTTCCCGTACC+AGG | - | chr1.1:62068989-62069008 | None:intergenic | 55.0% | |
| CGGTGGTCCGGTAATCGAAT+TGG | + | chr1.1:62065740-62065759 | MS.gene005292:CDS | 55.0% | |
| CTGTGCAGTAGTGCCCCAAA+AGG | + | chr1.1:62066992-62067011 | MS.gene005292:intron | 55.0% | |
| GATACATCCACCCATGCTGG+AGG | - | chr1.1:62067447-62067466 | None:intergenic | 55.0% | |
| GCCGTCGTTTGGAGATGGTA+AGG | + | chr1.1:62067545-62067564 | MS.gene005292:CDS | 55.0% | |
| GGGTCAAGATGGAGTTGACC+TGG | + | chr1.1:62069212-62069231 | MS.gene005292:intron | 55.0% | |
| GTGGCAACCACTGTTGAGGA+TGG | + | chr1.1:62069891-62069910 | MS.gene005292:CDS | 55.0% | |
| GTTGTCCAAGGCTCATGCGA+AGG | + | chr1.1:62067515-62067534 | MS.gene005292:CDS | 55.0% | |
| TAAGGCCTTCGCATGAGCCT+TGG | - | chr1.1:62067523-62067542 | None:intergenic | 55.0% | |
| ! | CCCCTTCACGAGAAGCACAA+AGG | - | chr1.1:62069330-62069349 | None:intergenic | 55.0% |
| ! | TGCGGAGACTTGCTTCTGCA+GGG | + | chr1.1:62067637-62067656 | MS.gene005292:CDS | 55.0% |
| !! | CCGCTTAGTACCGATGATCC+TGG | + | chr1.1:62065801-62065820 | MS.gene005292:CDS | 55.0% |
| CAATCGGTGGGACCCTTTCC+CGG | + | chr1.1:62066364-62066383 | MS.gene005292:intron | 60.0% | |
| CGTTCCCACTCACCGAAGCA+TGG | + | chr1.1:62066753-62066772 | MS.gene005292:intron | 60.0% | |
| CTCTCGCATGCACATGGTCC+GGG | - | chr1.1:62066385-62066404 | None:intergenic | 60.0% | |
| CTTCTCGTGAAGGGGGTGGT+GGG | + | chr1.1:62069335-62069354 | MS.gene005292:intron | 60.0% | |
| GACAGCGGCGAAGATGACGA+CGG | - | chr1.1:62065708-62065727 | None:intergenic | 60.0% | |
| GCAGATCCTCTCCTTCTGCG+AGG | + | chr1.1:62069772-62069791 | MS.gene005292:intron | 60.0% | |
| GCATGCACATGGTCCGGGAA+AGG | - | chr1.1:62066380-62066399 | None:intergenic | 60.0% | |
| GCGAAGATGACGACGGAGCA+CGG | - | chr1.1:62065701-62065720 | None:intergenic | 60.0% | |
| GCGCCTCAGGCAGCAAAAAG+AGG | + | chr1.1:62068724-62068743 | MS.gene005292:CDS | 60.0% | |
| GCTCTCGCATGCACATGGTC+CGG | - | chr1.1:62066386-62066405 | None:intergenic | 60.0% | |
| GGAGGCAGCCCCACAGTAAT+TGG | - | chr1.1:62067429-62067448 | None:intergenic | 60.0% | |
| TGCTTCTGCAGGGCCTTCTG+AGG | + | chr1.1:62067647-62067666 | MS.gene005292:CDS | 60.0% | |
| TGTGCTTCTCGTGAAGGGGG+TGG | + | chr1.1:62069331-62069350 | MS.gene005292:intron | 60.0% | |
| TTCGCTAGTGGCAGGCCATG+TGG | - | chr1.1:62066528-62066547 | None:intergenic | 60.0% | |
| ! | CTGCGGAGACTTGCTTCTGC+AGG | + | chr1.1:62067636-62067655 | MS.gene005292:CDS | 60.0% |
| !! | GGGTTGCAGAGCTCTGAGAG+AGG | - | chr1.1:62066308-62066327 | None:intergenic | 60.0% |
| CCGCGAGAGGAGGTAGACAG+CGG | - | chr1.1:62065723-62065742 | None:intergenic | 65.0% | |
| CCGCTGTCTACCTCCTCTCG+CGG | + | chr1.1:62065720-62065739 | MS.gene005292:CDS | 65.0% | |
| CTGTCTACCTCCTCTCGCGG+TGG | + | chr1.1:62065723-62065742 | MS.gene005292:CDS | 65.0% | |
| GATTACCGGACCACCGCGAG+AGG | - | chr1.1:62065736-62065755 | None:intergenic | 65.0% | |
| GCTTCTCGTGAAGGGGGTGG+TGG | + | chr1.1:62069334-62069353 | MS.gene005292:intron | 65.0% | |
| TACCTCCTCTCGCGGTGGTC+CGG | + | chr1.1:62065728-62065747 | MS.gene005292:CDS | 65.0% | |
| TGTGGGGCTGCCTCCAGCAT+GGG | + | chr1.1:62067434-62067453 | MS.gene005292:CDS | 65.0% | |
| !! | CAGGAAGTGCTGCCGGAGTG+TGG | - | chr1.1:62066669-62066688 | None:intergenic | 65.0% |
| CTGTGGGGCTGCCTCCAGCA+TGG | + | chr1.1:62067433-62067452 | MS.gene005292:CDS | 70.0% | |
| TACCGGACCACCGCGAGAGG+AGG | - | chr1.1:62065733-62065752 | None:intergenic | 70.0% | |
| GGGGCTGCCTCCAGCATGGG+TGG | + | chr1.1:62067437-62067456 | MS.gene005292:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 62065639 | 62070137 | 62065639 | ID=MS.gene005292 |
| chr1.1 | mRNA | 62065639 | 62070137 | 62065639 | ID=MS.gene005292.t1;Parent=MS.gene005292 |
| chr1.1 | exon | 62065639 | 62065832 | 62065639 | ID=MS.gene005292.t1.exon1;Parent=MS.gene005292.t1 |
| chr1.1 | CDS | 62065639 | 62065832 | 62065639 | ID=cds.MS.gene005292.t1;Parent=MS.gene005292.t1 |
| chr1.1 | exon | 62067413 | 62067695 | 62067413 | ID=MS.gene005292.t1.exon2;Parent=MS.gene005292.t1 |
| chr1.1 | CDS | 62067413 | 62067695 | 62067413 | ID=cds.MS.gene005292.t1;Parent=MS.gene005292.t1 |
| chr1.1 | exon | 62068656 | 62068745 | 62068656 | ID=MS.gene005292.t1.exon3;Parent=MS.gene005292.t1 |
| chr1.1 | CDS | 62068656 | 62068745 | 62068656 | ID=cds.MS.gene005292.t1;Parent=MS.gene005292.t1 |
| chr1.1 | exon | 62069213 | 62069290 | 62069213 | ID=MS.gene005292.t1.exon4;Parent=MS.gene005292.t1 |
| chr1.1 | CDS | 62069213 | 62069290 | 62069213 | ID=cds.MS.gene005292.t1;Parent=MS.gene005292.t1 |
| chr1.1 | exon | 62069528 | 62069605 | 62069528 | ID=MS.gene005292.t1.exon5;Parent=MS.gene005292.t1 |
| chr1.1 | CDS | 62069528 | 62069605 | 62069528 | ID=cds.MS.gene005292.t1;Parent=MS.gene005292.t1 |
| chr1.1 | exon | 62069702 | 62069767 | 62069702 | ID=MS.gene005292.t1.exon6;Parent=MS.gene005292.t1 |
| chr1.1 | CDS | 62069702 | 62069767 | 62069702 | ID=cds.MS.gene005292.t1;Parent=MS.gene005292.t1 |
| chr1.1 | exon | 62069852 | 62069932 | 62069852 | ID=MS.gene005292.t1.exon7;Parent=MS.gene005292.t1 |
| chr1.1 | CDS | 62069852 | 62069932 | 62069852 | ID=cds.MS.gene005292.t1;Parent=MS.gene005292.t1 |
| chr1.1 | exon | 62070030 | 62070137 | 62070030 | ID=MS.gene005292.t1.exon8;Parent=MS.gene005292.t1 |
| chr1.1 | CDS | 62070030 | 62070137 | 62070030 | ID=cds.MS.gene005292.t1;Parent=MS.gene005292.t1 |
| Gene Sequence |
| Protein sequence |
