Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40807.t1 | XP_024638596.1 | 99.7 | 325 | 1 | 0 | 1 | 325 | 1 | 325 | 2.50E-166 | 594.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40807.t1 | Q9SUJ1 | 76.4 | 335 | 65 | 3 | 1 | 325 | 1 | 331 | 9.5e-130 | 464.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40807.t1 | A0A396JXD9 | 99.7 | 325 | 1 | 0 | 1 | 325 | 1 | 325 | 1.8e-166 | 594.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene40807 | MS.gene027060 | PPI |
| MS.gene40807 | MS.gene48916 | PPI |
| MS.gene40807 | MS.gene003352 | PPI |
| MS.gene40807 | MS.gene45857 | PPI |
| MS.gene40807 | MS.gene22643 | PPI |
| MS.gene40807 | MS.gene02144 | PPI |
| MS.gene038424 | MS.gene40807 | PPI |
| MS.gene40807 | MS.gene062285 | PPI |
| MS.gene40807 | MS.gene02663 | PPI |
| MS.gene40807 | MS.gene78212 | PPI |
| MS.gene40807 | MS.gene22645 | PPI |
| MS.gene40807 | MS.gene90588 | PPI |
| MS.gene40807 | MS.gene81965 | PPI |
| MS.gene48256 | MS.gene40807 | PPI |
| MS.gene40807 | MS.gene017190 | PPI |
| MS.gene40807 | MS.gene059227 | PPI |
| MS.gene65117 | MS.gene40807 | PPI |
| MS.gene40807 | MS.gene77217 | PPI |
| MS.gene40807 | MS.gene052932 | PPI |
| MS.gene66057 | MS.gene40807 | PPI |
| MS.gene40807 | MS.gene82750 | PPI |
| MS.gene40807 | MS.gene065513 | PPI |
| MS.gene40807 | MS.gene50365 | PPI |
| MS.gene40807 | MS.gene02757 | PPI |
| MS.gene013657 | MS.gene40807 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40807.t1 | MTR_1g083790 | 99.683 | 315 | 1 | 0 | 1 | 315 | 1 | 315 | 0.0 | 645 |
| MS.gene40807.t1 | MTR_7g109165 | 66.561 | 314 | 99 | 5 | 1 | 311 | 1 | 311 | 1.22e-135 | 391 |
| MS.gene40807.t1 | MTR_7g084590 | 25.097 | 259 | 157 | 7 | 83 | 320 | 21 | 263 | 1.69e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40807.t1 | AT3G05710 | 76.418 | 335 | 65 | 3 | 1 | 325 | 1 | 331 | 0.0 | 522 |
| MS.gene40807.t1 | AT3G05710 | 75.821 | 335 | 66 | 3 | 1 | 325 | 1 | 330 | 0.0 | 516 |
| MS.gene40807.t1 | AT5G26980 | 77.982 | 327 | 65 | 5 | 1 | 325 | 1 | 322 | 0.0 | 510 |
| MS.gene40807.t1 | AT5G26980 | 77.982 | 327 | 65 | 5 | 1 | 325 | 1 | 322 | 0.0 | 510 |
| MS.gene40807.t1 | AT5G26980 | 77.982 | 327 | 65 | 5 | 1 | 325 | 1 | 322 | 0.0 | 510 |
| MS.gene40807.t1 | AT4G02195 | 64.220 | 327 | 111 | 4 | 1 | 325 | 1 | 323 | 1.52e-151 | 428 |
Find 68 sgRNAs with CRISPR-Local
Find 321 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGACCTTCTGCAATTGTTTA+AGG | 0.154574 | 1.2:+59673131 | None:intergenic |
| GTTGGTTCTGTTAATCATTA+AGG | 0.187645 | 1.2:-59672944 | MS.gene40807:CDS |
| GGAGGCAGCCCCACAGTAAT+TGG | 0.282740 | 1.2:+59675618 | None:intergenic |
| GGCAGAGAGAACTCAGAAAA+AGG | 0.288965 | 1.2:-59673016 | MS.gene40807:CDS |
| TATCATGTGCTTTGTTATGT+TGG | 0.361395 | 1.2:-59672962 | MS.gene40807:CDS |
| ATCTCCAAACGACGGCATTA+AGG | 0.369271 | 1.2:+59675506 | None:intergenic |
| CTGCGGAGACTTGCTTCTGC+AGG | 0.409691 | 1.2:-59675408 | MS.gene40807:CDS |
| AGATGATGACTTGGACAATA+TGG | 0.409826 | 1.2:-59673776 | MS.gene40807:intron |
| TACCTCCTCTCGCGGTGGTC+CGG | 0.424937 | 1.2:-59677360 | MS.gene40807:CDS |
| TTCCATTCATGTTAATCTCC+AGG | 0.430908 | 1.2:+59673815 | None:intergenic |
| TGTGGGGCTGCCTCCAGCAT+GGG | 0.434854 | 1.2:-59675610 | MS.gene40807:CDS |
| CAACTTATTTGAAGCGCCTC+AGG | 0.446869 | 1.2:-59674333 | MS.gene40807:CDS |
| GTGCTGACCAATTCGATTAC+CGG | 0.448177 | 1.2:+59677341 | None:intergenic |
| AAGGCCTTAATGCCGTCGTT+TGG | 0.451834 | 1.2:-59675510 | MS.gene40807:CDS |
| CGAGCTTGCTCAGATTATGA+AGG | 0.465210 | 1.2:-59673326 | MS.gene40807:CDS |
| TAAGGCCTTCGCATGAGCCT+TGG | 0.469990 | 1.2:+59675524 | None:intergenic |
| CCGATGATCCTGGTGGTTCA+AGG | 0.471361 | 1.2:-59677277 | MS.gene40807:intron |
| GGGGCTGCCTCCAGCATGGG+TGG | 0.473862 | 1.2:-59675607 | MS.gene40807:CDS |
| GGTTTAAATCCAATTACTGT+GGG | 0.477788 | 1.2:-59675627 | MS.gene40807:CDS |
| CGGTGGTCCGGTAATCGAAT+TGG | 0.480133 | 1.2:-59677348 | MS.gene40807:CDS |
| TGCTTCTGCAGGGCCTTCTG+AGG | 0.500982 | 1.2:-59675397 | MS.gene40807:CDS |
| AAGCGGAGCATAAGAGCGAT+TGG | 0.501678 | 1.2:+59677304 | None:intergenic |
| CTGTGGGGCTGCCTCCAGCA+TGG | 0.507201 | 1.2:-59675611 | MS.gene40807:CDS |
| TCAGATACATCCACCCATGC+TGG | 0.509293 | 1.2:+59675597 | None:intergenic |
| TGCGGAGACTTGCTTCTGCA+GGG | 0.519709 | 1.2:-59675407 | MS.gene40807:CDS |
| CCGCTTAGTACCGATGATCC+TGG | 0.524029 | 1.2:-59677287 | MS.gene40807:CDS |
| CTTCTGAGGATTCCAATGTC+AGG | 0.540775 | 1.2:-59675383 | MS.gene40807:CDS |
| GCCGTCGTTTGGAGATGGTA+AGG | 0.544395 | 1.2:-59675499 | MS.gene40807:CDS |
| AGCGGAGCATAAGAGCGATT+GGG | 0.546694 | 1.2:+59677305 | None:intergenic |
| TTAATGCCGTCGTTTGGAGA+TGG | 0.553207 | 1.2:-59675504 | MS.gene40807:CDS |
| AACTGACTTGATAAAGAGAT+CGG | 0.558407 | 1.2:-59675439 | MS.gene40807:CDS |
| GCGAAGATGACGACGGAGCG+CGG | 0.558751 | 1.2:+59677390 | None:intergenic |
| GGGTCAAGATGGAGTTGACC+TGG | 0.559696 | 1.2:-59673833 | MS.gene40807:CDS |
| GATCTACAGAGAGGCTCTGA+AGG | 0.565812 | 1.2:+59674371 | None:intergenic |
| CCTTGAACCACCAGGATCAT+CGG | 0.569373 | 1.2:+59677277 | None:intergenic |
| GACCTGGAGATTAACATGAA+TGG | 0.572532 | 1.2:-59673817 | MS.gene40807:CDS |
| ACGATGATGCAGGGTCAAGA+TGG | 0.577379 | 1.2:-59673844 | MS.gene40807:intron |
| GATATTTAACGAGCATCAGA+TGG | 0.584575 | 1.2:-59673518 | MS.gene40807:CDS |
| TAAATATGAAGATGATGACT+TGG | 0.585064 | 1.2:-59673785 | MS.gene40807:CDS |
| GGGTTTAAATCCAATTACTG+TGG | 0.588018 | 1.2:-59675628 | MS.gene40807:CDS |
| TTTAAGGCCGTCCTCAACTG+TGG | 0.590483 | 1.2:+59673147 | None:intergenic |
| ATAGTCTATTCTATCAACAA+TGG | 0.590977 | 1.2:+59673189 | None:intergenic |
| GTTGTCCAAGGCTCATGCGA+AGG | 0.595799 | 1.2:-59675529 | MS.gene40807:CDS |
| AGACTATAACATTCAGAATG+TGG | 0.601971 | 1.2:-59673173 | MS.gene40807:CDS |
| CTGACATTGGAATCCTCAGA+AGG | 0.605361 | 1.2:+59675384 | None:intergenic |
| GAATGTGGCAACCACAGTTG+AGG | 0.615918 | 1.2:-59673158 | MS.gene40807:CDS |
| TACCGGACCACCGCGAGAGG+AGG | 0.619945 | 1.2:+59677358 | None:intergenic |
| CCACCGCGAGAGGAGGTAGA+CGG | 0.620622 | 1.2:+59677365 | None:intergenic |
| CGGCCTTAAACAATTGCAGA+AGG | 0.629080 | 1.2:-59673134 | MS.gene40807:intron |
| AAAGAGTACCTTGAACCACC+AGG | 0.637073 | 1.2:+59677269 | None:intergenic |
| CCGTCTACCTCCTCTCGCGG+TGG | 0.646893 | 1.2:-59677365 | MS.gene40807:CDS |
| ATCAGTACTAGTCATAGACC+AGG | 0.646952 | 1.2:-59673299 | MS.gene40807:intron |
| GTGGCAACCACAGTTGAGGA+CGG | 0.650209 | 1.2:-59673154 | MS.gene40807:CDS |
| GATTACCGGACCACCGCGAG+AGG | 0.656759 | 1.2:+59677355 | None:intergenic |
| GATACATCCACCCATGCTGG+AGG | 0.661774 | 1.2:+59675600 | None:intergenic |
| CCGCCGTCTACCTCCTCTCG+CGG | 0.666831 | 1.2:-59677368 | MS.gene40807:CDS |
| TCGGAATCTGAATGGCGACG+AGG | 0.676673 | 1.2:-59677460 | None:intergenic |
| TTAGAGACTCAATAGCATGT+TGG | 0.680372 | 1.2:+59675472 | None:intergenic |
| AGAGATCGGAGAAGAGACTG+CGG | 0.681249 | 1.2:-59675425 | MS.gene40807:CDS |
| TCCTTACCATCTCCAAACGA+CGG | 0.691112 | 1.2:+59675498 | None:intergenic |
| CCAGGATCATCGGTACTAAG+CGG | 0.695962 | 1.2:+59677287 | None:intergenic |
| GTTTAAATCCAATTACTGTG+GGG | 0.707617 | 1.2:-59675626 | MS.gene40807:CDS |
| GCGATTGGGATTAAGAAGCG+AGG | 0.709817 | 1.2:+59677319 | None:intergenic |
| CTTAGTACCGATGATCCTGG+TGG | 0.710981 | 1.2:-59677284 | MS.gene40807:CDS |
| GACGGCGGCGAAGATGACGA+CGG | 0.733957 | 1.2:+59677383 | None:intergenic |
| CCGCGAGAGGAGGTAGACGG+CGG | 0.734166 | 1.2:+59677368 | None:intergenic |
| TCTTGCGAAGATCTACAGAG+AGG | 0.735622 | 1.2:+59674362 | None:intergenic |
| TATTGAGTCTCTAACACACG+AGG | 0.747213 | 1.2:-59675463 | MS.gene40807:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAAAATAAAATAACACA+CGG | + | chr1.2:59673224-59673243 | None:intergenic | 10.0% |
| !! | TATTAATAAATGAAAAATAG+TGG | + | chr1.2:59676108-59676127 | None:intergenic | 10.0% |
| !!! | AATAAAATTGCAATTTTTTT+AGG | - | chr1.2:59676133-59676152 | MS.gene40807:intron | 10.0% |
| !!! | ATAAAATTGCAATTTTTTTA+GGG | - | chr1.2:59676134-59676153 | MS.gene40807:intron | 10.0% |
| !!! | ATTTAATTTCATATTTTAAC+AGG | + | chr1.2:59673632-59673651 | None:intergenic | 10.0% |
| !!! | TTATTTTATTCATCATTTTT+CGG | - | chr1.2:59674556-59674575 | MS.gene40807:intron | 10.0% |
| !! | AATATGAAATTAAATGCAAT+CGG | - | chr1.2:59673637-59673656 | MS.gene40807:intron | 15.0% |
| !! | AATGATTCATTAATACAAAA+AGG | - | chr1.2:59673241-59673260 | MS.gene40807:intron | 15.0% |
| !! | ATATCTAGATATAAATGATT+TGG | + | chr1.2:59676846-59676865 | None:intergenic | 15.0% |
| !! | TCCAAATAAGAAAATATAAA+AGG | - | chr1.2:59675266-59675285 | MS.gene40807:intron | 15.0% |
| !! | TTTCACATAATACTTATAAA+TGG | - | chr1.2:59675050-59675069 | MS.gene40807:intron | 15.0% |
| !!! | ATGGTAATTATTTTGTTTAT+GGG | - | chr1.2:59677334-59677353 | MS.gene40807:CDS | 15.0% |
| !!! | TAAAATTGCAATTTTTTTAG+GGG | - | chr1.2:59676135-59676154 | MS.gene40807:intron | 15.0% |
| !!! | TATGGTAATTATTTTGTTTA+TGG | - | chr1.2:59677333-59677352 | MS.gene40807:CDS | 15.0% |
| !!! | TATTTTATTCATCATTTTTC+GGG | - | chr1.2:59674557-59674576 | MS.gene40807:intron | 15.0% |
| !!! | TCCTTTTATATTTTCTTATT+TGG | + | chr1.2:59675270-59675289 | None:intergenic | 15.0% |
| !! | AAAATTAAGAGAAAAAGATC+AGG | - | chr1.2:59673738-59673757 | MS.gene40807:intron | 20.0% |
| !! | AAACACTAAAAAAAGAAACA+TGG | - | chr1.2:59675301-59675320 | MS.gene40807:intron | 20.0% |
| !! | AAATTAAAATGAGTCGAAAA+AGG | + | chr1.2:59675848-59675867 | None:intergenic | 20.0% |
| !! | AAATTTAGTTGACATTATTC+TGG | - | chr1.2:59675467-59675486 | MS.gene40807:CDS | 20.0% |
| !! | AATCAAGTTAAAATCTTTGT+GGG | - | chr1.2:59675114-59675133 | MS.gene40807:intron | 20.0% |
| !! | AATCTATGTCAAAACAAAAA+TGG | - | chr1.2:59675786-59675805 | MS.gene40807:intron | 20.0% |
| !! | AGAATAATGTCAACTAAATT+TGG | + | chr1.2:59675468-59675487 | None:intergenic | 20.0% |
| !! | AGTACTCTAAATTTAAATTG+AGG | + | chr1.2:59676262-59676281 | None:intergenic | 20.0% |
| !! | ATCAATCTAATTATTTGGAA+TGG | + | chr1.2:59673424-59673443 | None:intergenic | 20.0% |
| !! | GTACTCTAAATTTAAATTGA+GGG | + | chr1.2:59676261-59676280 | None:intergenic | 20.0% |
| !! | TAATCAAGTTAAAATCTTTG+TGG | - | chr1.2:59675113-59675132 | MS.gene40807:intron | 20.0% |
| !! | TCGAGATCAAAATTAATAAT+AGG | - | chr1.2:59674125-59674144 | MS.gene40807:intron | 20.0% |
| !! | TTTAAGGAATATTATACTGA+AGG | - | chr1.2:59676408-59676427 | MS.gene40807:intron | 20.0% |
| !!! | ATTAATAATAGGTTTTCAGT+AGG | - | chr1.2:59674136-59674155 | MS.gene40807:intron | 20.0% |
| !!! | GTTTCTTTTTTTAGTGTTTA+TGG | + | chr1.2:59675300-59675319 | None:intergenic | 20.0% |
| !!! | TAGGATATTAATTGTTTTTG+CGG | - | chr1.2:59674719-59674738 | MS.gene40807:intron | 20.0% |
| !!! | TTTCGACTCATTTTAATTTA+TGG | - | chr1.2:59675849-59675868 | MS.gene40807:intron | 20.0% |
| ! | AAGAGAGAAATTATAATGAG+TGG | - | chr1.2:59675224-59675243 | MS.gene40807:intron | 25.0% |
| ! | AATAATAAGTCACAGAAACT+AGG | + | chr1.2:59675628-59675647 | None:intergenic | 25.0% |
| ! | AGAGAGAAATTATAATGAGT+GGG | - | chr1.2:59675225-59675244 | MS.gene40807:intron | 25.0% |
| ! | AGTAGAAAAAGAAGAGAAAA+AGG | + | chr1.2:59677272-59677291 | None:intergenic | 25.0% |
| ! | ATAGTCTATTCTATCAACAA+TGG | + | chr1.2:59677193-59677212 | None:intergenic | 25.0% |
| ! | ATATGAGACTTAGTAATTGT+AGG | - | chr1.2:59674700-59674719 | MS.gene40807:intron | 25.0% |
| ! | ATGAAAATCCATATACTTAG+TGG | + | chr1.2:59676512-59676531 | None:intergenic | 25.0% |
| ! | ATTGAAAGATGAAGTCATAT+TGG | - | chr1.2:59673292-59673311 | MS.gene40807:intron | 25.0% |
| ! | GATGGATCAATCTAATTATT+TGG | + | chr1.2:59673429-59673448 | None:intergenic | 25.0% |
| ! | GCTTCAAAACAATTGTATTT+AGG | - | chr1.2:59673480-59673499 | MS.gene40807:CDS | 25.0% |
| ! | GTGAATAAGTAGGTAATAAA+CGG | + | chr1.2:59676717-59676736 | None:intergenic | 25.0% |
| ! | TAAATATGAAGATGATGACT+TGG | - | chr1.2:59676594-59676613 | MS.gene40807:intron | 25.0% |
| ! | TAAGTTCTCACTTACAATTA+AGG | - | chr1.2:59675812-59675831 | MS.gene40807:intron | 25.0% |
| ! | TACAAAAAGGAAATCACATT+TGG | - | chr1.2:59673254-59673273 | MS.gene40807:intron | 25.0% |
| ! | TCATTATATCCATCTATTAC+TGG | + | chr1.2:59674515-59674534 | None:intergenic | 25.0% |
| ! | TTAACAAAGCACAAAACTAA+GGG | + | chr1.2:59675673-59675692 | None:intergenic | 25.0% |
| ! | TTACACACAATCTAAAAAGA+TGG | + | chr1.2:59673447-59673466 | None:intergenic | 25.0% |
| ! | TTTAACAAAGCACAAAACTA+AGG | + | chr1.2:59675674-59675693 | None:intergenic | 25.0% |
| ! | TTTATTACCTACTTATTCAC+CGG | - | chr1.2:59676717-59676736 | MS.gene40807:intron | 25.0% |
| !! | CTCTTCTTTTTCTACTATTT+TGG | - | chr1.2:59677276-59677295 | MS.gene40807:intron | 25.0% |
| AATATGATCATTCCATGTAC+TGG | - | chr1.2:59676773-59676792 | MS.gene40807:intron | 30.0% | |
| AATTAGAATTGCCTTGGAAA+GGG | - | chr1.2:59674580-59674599 | MS.gene40807:intron | 30.0% | |
| AATTGACATCCTCTATATAC+AGG | - | chr1.2:59677164-59677183 | MS.gene40807:intron | 30.0% | |
| ACTTTGTATCCATCTATTAC+TGG | + | chr1.2:59674478-59674497 | None:intergenic | 30.0% | |
| AGACTATAACATTCAGAATG+TGG | - | chr1.2:59677206-59677225 | MS.gene40807:intron | 30.0% | |
| AGAGAAATTATAATGAGTGG+GGG | - | chr1.2:59675227-59675246 | MS.gene40807:intron | 30.0% | |
| AGATTCTTCCAACAACATAT+GGG | + | chr1.2:59675913-59675932 | None:intergenic | 30.0% | |
| ATCAGCATGTACATTTAGTT+AGG | + | chr1.2:59674432-59674451 | None:intergenic | 30.0% | |
| ATGAAATTAAATGCAATCGG+TGG | - | chr1.2:59673640-59673659 | MS.gene40807:intron | 30.0% | |
| ATTCTGACAATATCTCCATT+GGG | - | chr1.2:59673910-59673929 | MS.gene40807:intron | 30.0% | |
| ATTGACATCCTCTATATACA+GGG | - | chr1.2:59677165-59677184 | MS.gene40807:intron | 30.0% | |
| CAAAAGTAAAGCAAAAGGAA+TGG | - | chr1.2:59674318-59674337 | MS.gene40807:intron | 30.0% | |
| CAATTAATGCTCAAAACTTC+CGG | + | chr1.2:59676739-59676758 | None:intergenic | 30.0% | |
| CTAAAATGTAACACACTTGA+AGG | + | chr1.2:59675493-59675512 | None:intergenic | 30.0% | |
| CTAAGGCAATAACTGAATTA+AGG | + | chr1.2:59673883-59673902 | None:intergenic | 30.0% | |
| GAGAGAAATTATAATGAGTG+GGG | - | chr1.2:59675226-59675245 | MS.gene40807:intron | 30.0% | |
| GGTTTAAATCCAATTACTGT+GGG | - | chr1.2:59674752-59674771 | MS.gene40807:intron | 30.0% | |
| GTTAAATGTGTCATGAATGA+CGG | + | chr1.2:59676965-59676984 | None:intergenic | 30.0% | |
| GTTACATACCACTAAGTATA+TGG | - | chr1.2:59676501-59676520 | MS.gene40807:intron | 30.0% | |
| GTTGTTGGAAGAATCTATAA+TGG | - | chr1.2:59675917-59675936 | MS.gene40807:intron | 30.0% | |
| GTTTAAATCCAATTACTGTG+GGG | - | chr1.2:59674753-59674772 | MS.gene40807:intron | 30.0% | |
| TACAGTTTCTGTGAATATAC+TGG | + | chr1.2:59673362-59673381 | None:intergenic | 30.0% | |
| TAGATTCTTCCAACAACATA+TGG | + | chr1.2:59675914-59675933 | None:intergenic | 30.0% | |
| TCAGCATGTACATTTAGTTA+GGG | + | chr1.2:59674431-59674450 | None:intergenic | 30.0% | |
| TGAAATTAAATGCAATCGGT+GGG | - | chr1.2:59673641-59673660 | MS.gene40807:intron | 30.0% | |
| TTCACTATTAGCTGATGATA+GGG | + | chr1.2:59676358-59676377 | None:intergenic | 30.0% | |
| TTCTTATTCTTCGAAACCAT+TGG | - | chr1.2:59674090-59674109 | MS.gene40807:intron | 30.0% | |
| ! | AGAGGATGTCAATTTTCATA+AGG | + | chr1.2:59677158-59677177 | None:intergenic | 30.0% |
| ! | GAGGATGTCAATTTTCATAA+GGG | + | chr1.2:59677157-59677176 | None:intergenic | 30.0% |
| ! | GCAGATATGTGTTTTATATG+TGG | + | chr1.2:59675396-59675415 | None:intergenic | 30.0% |
| ! | TATCATGTGCTTTGTTATGT+TGG | - | chr1.2:59677417-59677436 | MS.gene40807:CDS | 30.0% |
| ! | TCAATGCATCTCTGTATTTT+CGG | + | chr1.2:59672962-59672981 | None:intergenic | 30.0% |
| ! | TGAGCATTTTCTTATTCTGT+TGG | - | chr1.2:59675957-59675976 | MS.gene40807:intron | 30.0% |
| ! | TTTCATTTTACGATGATGCA+GGG | - | chr1.2:59676526-59676545 | MS.gene40807:intron | 30.0% |
| ! | TTTTCATTTTACGATGATGC+AGG | - | chr1.2:59676525-59676544 | MS.gene40807:intron | 30.0% |
| !! | AACTGACTTGATAAAGAGAT+CGG | - | chr1.2:59674940-59674959 | MS.gene40807:intron | 30.0% |
| !! | ACACCAAATAATTTGTTCTG+AGG | - | chr1.2:59675366-59675385 | MS.gene40807:intron | 30.0% |
| !! | CACCAAATAATTTGTTCTGA+GGG | - | chr1.2:59675367-59675386 | MS.gene40807:intron | 30.0% |
| !! | CTCAATTGATTCACAGTTTT+TGG | - | chr1.2:59676998-59677017 | MS.gene40807:intron | 30.0% |
| !! | GTTGGTTCTGTTAATCATTA+AGG | - | chr1.2:59677435-59677454 | MS.gene40807:CDS | 30.0% |
| !! | TACTTGGCATTTTGCTTTTA+AGG | - | chr1.2:59676392-59676411 | MS.gene40807:intron | 30.0% |
| !! | TTCCTTTTGCTTTACTTTTG+CGG | + | chr1.2:59674318-59674337 | None:intergenic | 30.0% |
| !!! | AGCTTCACTTTTTTTAAGCT+TGG | + | chr1.2:59676887-59676906 | None:intergenic | 30.0% |
| !!! | CAATTTTTTTAGGGGTTTAC+TGG | - | chr1.2:59676143-59676162 | MS.gene40807:intron | 30.0% |
| !!! | TGGTGATGCATTTTAGTTTT+TGG | - | chr1.2:59675070-59675089 | MS.gene40807:intron | 30.0% |
| !!! | TTTTTGGTGTTTGCTTTTAC+AGG | - | chr1.2:59677014-59677033 | MS.gene40807:intron | 30.0% |
| AAAACTTCCGGTGAATAAGT+AGG | + | chr1.2:59676727-59676746 | None:intergenic | 35.0% | |
| AACAAGTGGTGAAGTATACT+TGG | - | chr1.2:59676376-59676395 | MS.gene40807:intron | 35.0% | |
| AAGTAAAGCAAAAGGAATGG+AGG | - | chr1.2:59674321-59674340 | MS.gene40807:CDS | 35.0% | |
| AGTAGGTAATAAACGGCATA+AGG | + | chr1.2:59676710-59676729 | None:intergenic | 35.0% | |
| ATATCATACCAGTGATACCA+TGG | + | chr1.2:59675168-59675187 | None:intergenic | 35.0% | |
| ATCAGCTAATAGTGAACAAG+TGG | - | chr1.2:59676362-59676381 | MS.gene40807:intron | 35.0% | |
| ATGGATTCTCCATTCAAAAG+TGG | - | chr1.2:59675320-59675339 | MS.gene40807:intron | 35.0% | |
| ATTAGAATTGCCTTGGAAAG+GGG | - | chr1.2:59674581-59674600 | MS.gene40807:intron | 35.0% | |
| ATTCTCCATTCAAAAGTGGA+AGG | - | chr1.2:59675324-59675343 | MS.gene40807:intron | 35.0% | |
| CACAATCATCCAGTAATAGA+TGG | - | chr1.2:59674466-59674485 | MS.gene40807:intron | 35.0% | |
| CTTATAAAGTGAACTTCGCA+AGG | - | chr1.2:59675524-59675543 | MS.gene40807:CDS | 35.0% | |
| CTTCTCCGATTGCATTTAAA+GGG | + | chr1.2:59673715-59673734 | None:intergenic | 35.0% | |
| GAAAGATGAAGTCATATTGG+AGG | - | chr1.2:59673295-59673314 | MS.gene40807:intron | 35.0% | |
| GAATTAGAATTGCCTTGGAA+AGG | - | chr1.2:59674579-59674598 | MS.gene40807:intron | 35.0% | |
| GATATTTAACGAGCATCAGA+TGG | - | chr1.2:59676861-59676880 | MS.gene40807:intron | 35.0% | |
| GATTCTGACAATATCTCCAT+TGG | - | chr1.2:59673909-59673928 | MS.gene40807:intron | 35.0% | |
| GATTTGGATTGCATTGTTGA+CGG | - | chr1.2:59673543-59673562 | MS.gene40807:intron | 35.0% | |
| GGGTTTAAATCCAATTACTG+TGG | - | chr1.2:59674751-59674770 | MS.gene40807:intron | 35.0% | |
| GTAACATGTCATTGTCAGTT+GGG | + | chr1.2:59674405-59674424 | None:intergenic | 35.0% | |
| GTCCCTCAGAACAAATTATT+TGG | + | chr1.2:59675372-59675391 | None:intergenic | 35.0% | |
| GTTCACTATTAGCTGATGAT+AGG | + | chr1.2:59676359-59676378 | None:intergenic | 35.0% | |
| TAAGAGAAAAAGATCAGGAG+AGG | - | chr1.2:59673743-59673762 | MS.gene40807:intron | 35.0% | |
| TACCAAGCAGCACTAAAAAT+AGG | + | chr1.2:59675438-59675457 | None:intergenic | 35.0% | |
| TACCGCAAAAGTAAAGCAAA+AGG | - | chr1.2:59674313-59674332 | MS.gene40807:intron | 35.0% | |
| TAGACTTTAAGTGGTTGAAG+TGG | - | chr1.2:59673978-59673997 | MS.gene40807:intron | 35.0% | |
| TCTTCTCCGATTGCATTTAA+AGG | + | chr1.2:59673716-59673735 | None:intergenic | 35.0% | |
| TGTAACATGTCATTGTCAGT+TGG | + | chr1.2:59674406-59674425 | None:intergenic | 35.0% | |
| TTAGAGACTCAATAGCATGT+TGG | + | chr1.2:59674910-59674929 | None:intergenic | 35.0% | |
| TTCAACCACTTAAAGTCTAC+AGG | + | chr1.2:59673977-59673996 | None:intergenic | 35.0% | |
| TTCACATGTATGCATGTTAC+AGG | - | chr1.2:59674675-59674694 | MS.gene40807:intron | 35.0% | |
| TTCCATTCATGTTAATCTCC+AGG | + | chr1.2:59676567-59676586 | None:intergenic | 35.0% | |
| ! | AGATGATGACTTGGACAATA+TGG | - | chr1.2:59676603-59676622 | MS.gene40807:intron | 35.0% |
| ! | CATTTGTTCCTTGGCATTTT+TGG | - | chr1.2:59674250-59674269 | MS.gene40807:intron | 35.0% |
| ! | TGAAGGAAAGATTTTCCCAA+TGG | + | chr1.2:59673928-59673947 | None:intergenic | 35.0% |
| ! | TGCTACATTTTCAATCGTGA+TGG | + | chr1.2:59674192-59674211 | None:intergenic | 35.0% |
| ! | TGTCAATTTTCATAAGGGTG+TGG | + | chr1.2:59677152-59677171 | None:intergenic | 35.0% |
| ! | TTTTCAGTAGGATGAAAGAC+TGG | - | chr1.2:59674148-59674167 | MS.gene40807:intron | 35.0% |
| !! | AAATGATTTGGTAGCATCAG+TGG | + | chr1.2:59676834-59676853 | None:intergenic | 35.0% |
| !! | AACAAGTATCGAAGTTTCGA+AGG | + | chr1.2:59674614-59674633 | None:intergenic | 35.0% |
| !! | ACAAGTATCGAAGTTTCGAA+GGG | + | chr1.2:59674613-59674632 | None:intergenic | 35.0% |
| !! | TATTTTGTTTATGGGCATGC+AGG | - | chr1.2:59677342-59677361 | MS.gene40807:CDS | 35.0% |
| !! | TGCAGAAATCAAGGCATTTT+TGG | + | chr1.2:59675890-59675909 | None:intergenic | 35.0% |
| !!! | ATCCTATTTTTAGTGCTGCT+TGG | - | chr1.2:59675433-59675452 | MS.gene40807:CDS | 35.0% |
| !!! | CATATTTTAACAGGAGCTCA+TGG | + | chr1.2:59673623-59673642 | None:intergenic | 35.0% |
| !!! | TGACTTGTCACTTTTTTTCC+TGG | - | chr1.2:59676302-59676321 | MS.gene40807:intron | 35.0% |
| !!! | TGTCACTTTTTTTCCTGGTA+CGG | - | chr1.2:59676307-59676326 | MS.gene40807:intron | 35.0% |
| AAAAATGGCAGAGTTGTCCA+AGG | - | chr1.2:59674838-59674857 | MS.gene40807:intron | 40.0% | |
| AATGCCAAGGAACAAATGTG+TGG | + | chr1.2:59674248-59674267 | None:intergenic | 40.0% | |
| ACATATGGGTGCAGAAATCA+AGG | + | chr1.2:59675899-59675918 | None:intergenic | 40.0% | |
| AGAGAGCAAGGGAATAAGTA+AGG | + | chr1.2:59676449-59676468 | None:intergenic | 40.0% | |
| AGATTGAAGAGAACATGGAG+TGG | + | chr1.2:59675595-59675614 | None:intergenic | 40.0% | |
| ATCAGTACTAGTCATAGACC+AGG | - | chr1.2:59677080-59677099 | MS.gene40807:intron | 40.0% | |
| ATTTCAGAAGTTGCACCTTC+TGG | - | chr1.2:59674215-59674234 | MS.gene40807:intron | 40.0% | |
| CAATGGTTCCCTGTATATAG+AGG | + | chr1.2:59677176-59677195 | None:intergenic | 40.0% | |
| CAATGTCAGGAAAAATGTGC+AGG | - | chr1.2:59675009-59675028 | MS.gene40807:intron | 40.0% | |
| CACTTCCTGTAGACTTTAAG+TGG | - | chr1.2:59673969-59673988 | MS.gene40807:intron | 40.0% | |
| GAAATTATAATGAGTGGGGG+AGG | - | chr1.2:59675230-59675249 | MS.gene40807:intron | 40.0% | |
| GACCTGGAGATTAACATGAA+TGG | - | chr1.2:59676562-59676581 | MS.gene40807:intron | 40.0% | |
| GAGGTGTGAAATCATCAATG+AGG | - | chr1.2:59673516-59673535 | MS.gene40807:CDS | 40.0% | |
| GATTGAAGAGAACATGGAGT+GGG | + | chr1.2:59675594-59675613 | None:intergenic | 40.0% | |
| GCAGAGAGAACTCAGAAAAA+GGG | - | chr1.2:59677364-59677383 | MS.gene40807:CDS | 40.0% | |
| GGACCTTCTGCAATTGTTTA+AGG | + | chr1.2:59677251-59677270 | None:intergenic | 40.0% | |
| GTAATAACCTTGTCCGTTCT+TGG | + | chr1.2:59674020-59674039 | None:intergenic | 40.0% | |
| GTCTAGTCCCATGGTATAAT+CGG | + | chr1.2:59673399-59673418 | None:intergenic | 40.0% | |
| GTGAAATCATCAATGAGGAG+CGG | - | chr1.2:59673521-59673540 | MS.gene40807:intron | 40.0% | |
| TATTGAGTCTCTAACACACG+AGG | - | chr1.2:59674916-59674935 | MS.gene40807:intron | 40.0% | |
| TCGATTGATGAAGAGACCAA+TGG | + | chr1.2:59674109-59674128 | None:intergenic | 40.0% | |
| TTAAGATCCAAGAACGGACA+AGG | - | chr1.2:59674010-59674029 | MS.gene40807:intron | 40.0% | |
| TTCGGGAATTAGAATTGCCT+TGG | - | chr1.2:59674574-59674593 | MS.gene40807:intron | 40.0% | |
| TTTCTGCACCCATATGTTGT+TGG | - | chr1.2:59675902-59675921 | MS.gene40807:intron | 40.0% | |
| ! | AGACTGGTTGAAATCTGTGT+TGG | - | chr1.2:59674164-59674183 | MS.gene40807:intron | 40.0% |
| ! | ATCTCTTGCATTGAGTTGCA+TGG | - | chr1.2:59675703-59675722 | MS.gene40807:intron | 40.0% |
| ! | CGGTATCAAATCTCCCTTTT+GGG | + | chr1.2:59674298-59674317 | None:intergenic | 40.0% |
| ! | CTGCACATTTTTCCTGACAT+TGG | + | chr1.2:59675011-59675030 | None:intergenic | 40.0% |
| ! | GACTGGTTGAAATCTGTGTT+GGG | - | chr1.2:59674165-59674184 | MS.gene40807:intron | 40.0% |
| ! | GGTATCAAATCTCCCTTTTG+GGG | + | chr1.2:59674297-59674316 | None:intergenic | 40.0% |
| ! | TCTCTGTCTCTTTTGCTCTA+TGG | - | chr1.2:59677315-59677334 | MS.gene40807:CDS | 40.0% |
| ! | TGCAACTTTTCCTTACCTGT+TGG | + | chr1.2:59676936-59676955 | None:intergenic | 40.0% |
| ! | TTGCATTGAGTTGCATGGTT+GGG | - | chr1.2:59675708-59675727 | MS.gene40807:intron | 40.0% |
| ! | TTTTAACAGGAGCTCATGGT+GGG | + | chr1.2:59673619-59673638 | None:intergenic | 40.0% |
| !! | ATTTTAACAGGAGCTCATGG+TGG | + | chr1.2:59673620-59673639 | None:intergenic | 40.0% |
| !! | TGTTTTTGCGGATGCAGTAA+GGG | - | chr1.2:59674731-59674750 | MS.gene40807:intron | 40.0% |
| !! | TTCGTCCTTCCACTTTTGAA+TGG | + | chr1.2:59675332-59675351 | None:intergenic | 40.0% |
| !!! | GTCACTTTTTTTCCTGGTAC+GGG | - | chr1.2:59676308-59676327 | MS.gene40807:intron | 40.0% |
| !!! | TTGTTTTTGCGGATGCAGTA+AGG | - | chr1.2:59674730-59674749 | MS.gene40807:intron | 40.0% |
| AAAGTGAACTTCGCAAGGAG+AGG | - | chr1.2:59675529-59675548 | MS.gene40807:CDS | 45.0% | |
| AACTCAGAAAAAGGGAGGCA+TGG | - | chr1.2:59677372-59677391 | MS.gene40807:CDS | 45.0% | |
| AACTTCGCAAGGAGAGGATT+AGG | - | chr1.2:59675535-59675554 | MS.gene40807:CDS | 45.0% | |
| AAGGAACAAATGTGTGGAGC+TGG | + | chr1.2:59674242-59674261 | None:intergenic | 45.0% | |
| AATCGACTACGTCCAGTACA+TGG | + | chr1.2:59676788-59676807 | None:intergenic | 45.0% | |
| ACCTTTGTGCTTCTCGTGAA+GGG | - | chr1.2:59676660-59676679 | MS.gene40807:intron | 45.0% | |
| AGCTCCACACATTTGTTCCT+TGG | - | chr1.2:59674241-59674260 | MS.gene40807:intron | 45.0% | |
| AGGAGAGAGAAAACTCCACA+TGG | - | chr1.2:59673799-59673818 | MS.gene40807:CDS | 45.0% | |
| AGGGAAAAAACCCCTTTCCA+AGG | + | chr1.2:59674594-59674613 | None:intergenic | 45.0% | |
| AGTCACAGAAACTAGGACAG+AGG | + | chr1.2:59675621-59675640 | None:intergenic | 45.0% | |
| AGTTGTTATCTCCTCGCAGA+AGG | + | chr1.2:59677120-59677139 | None:intergenic | 45.0% | |
| ATCTCCAAACGACGGCATTA+AGG | + | chr1.2:59674876-59674895 | None:intergenic | 45.0% | |
| CCGAGCTTAAGATCCAAGAA+CGG | - | chr1.2:59674004-59674023 | MS.gene40807:intron | 45.0% | |
| CCGTTCTTGGATCTTAAGCT+CGG | + | chr1.2:59674007-59674026 | None:intergenic | 45.0% | |
| CGGCCTTAAACAATTGCAGA+AGG | - | chr1.2:59677245-59677264 | MS.gene40807:intron | 45.0% | |
| CTAAACGAGTGACTCTACCA+TGG | - | chr1.2:59675148-59675167 | MS.gene40807:intron | 45.0% | |
| CTGACATTGGAATCCTCAGA+AGG | + | chr1.2:59674998-59675017 | None:intergenic | 45.0% | |
| CTTCAGATTCTTCCACACTC+CGG | - | chr1.2:59673943-59673962 | MS.gene40807:intron | 45.0% | |
| GACCAGTTTGATCCATGCTT+CGG | + | chr1.2:59674057-59674076 | None:intergenic | 45.0% | |
| GAGAGAACTCAGAAAAAGGG+AGG | - | chr1.2:59677367-59677386 | MS.gene40807:CDS | 45.0% | |
| GCAAGGAGAGGATTAGGAAA+AGG | - | chr1.2:59675541-59675560 | MS.gene40807:CDS | 45.0% | |
| GGCAGAGAGAACTCAGAAAA+AGG | - | chr1.2:59677363-59677382 | MS.gene40807:CDS | 45.0% | |
| GGCTGCCCTTTAAATGCAAT+CGG | - | chr1.2:59673707-59673726 | MS.gene40807:intron | 45.0% | |
| GGTGGAGATTGAAGAGAACA+TGG | + | chr1.2:59675600-59675619 | None:intergenic | 45.0% | |
| GTCAGAATCGCTGACAAAGT+TGG | + | chr1.2:59673853-59673872 | None:intergenic | 45.0% | |
| TACCTTTGTGCTTCTCGTGA+AGG | - | chr1.2:59676659-59676678 | MS.gene40807:intron | 45.0% | |
| TCCTTACCATCTCCAAACGA+CGG | + | chr1.2:59674884-59674903 | None:intergenic | 45.0% | |
| TCTGAGAGAGGATATGCAGA+AGG | + | chr1.2:59673585-59673604 | None:intergenic | 45.0% | |
| TCTTGCGAAGATCTACAGAG+AGG | + | chr1.2:59676020-59676039 | None:intergenic | 45.0% | |
| TGACTCTACCATGGTATCAC+TGG | - | chr1.2:59675157-59675176 | MS.gene40807:intron | 45.0% | |
| TTAATGCCGTCGTTTGGAGA+TGG | - | chr1.2:59674875-59674894 | MS.gene40807:intron | 45.0% | |
| TTATAATGAGTGGGGGAGGT+CGG | - | chr1.2:59675234-59675253 | MS.gene40807:intron | 45.0% | |
| TTGTCAGAATCGCTGAGCTA+AGG | + | chr1.2:59673900-59673919 | None:intergenic | 45.0% | |
| TTTAACAGGAGCTCATGGTG+GGG | + | chr1.2:59673618-59673637 | None:intergenic | 45.0% | |
| TTTAGGCTACGTACGATGAG+AGG | - | chr1.2:59673497-59673516 | MS.gene40807:CDS | 45.0% | |
| ! | CAACTTATTTGAAGCGCCTC+AGG | - | chr1.2:59676046-59676065 | MS.gene40807:intron | 45.0% |
| ! | CCATCTGCCGATTATACCAT+GGG | - | chr1.2:59673389-59673408 | MS.gene40807:intron | 45.0% |
| ! | CGAGCTTGCTCAGATTATGA+AGG | - | chr1.2:59677053-59677072 | MS.gene40807:intron | 45.0% |
| ! | CTTCTGAGGATTCCAATGTC+AGG | - | chr1.2:59674996-59675015 | MS.gene40807:intron | 45.0% |
| ! | CTTGCATTGAGTTGCATGGT+TGG | - | chr1.2:59675707-59675726 | MS.gene40807:intron | 45.0% |
| ! | GCGGTATCAAATCTCCCTTT+TGG | + | chr1.2:59674299-59674318 | None:intergenic | 45.0% |
| ! | GTGCTGACCAATTCGATTAC+CGG | + | chr1.2:59673041-59673060 | None:intergenic | 45.0% |
| ! | TCATCAATGAGGAGCGGATT+TGG | - | chr1.2:59673527-59673546 | MS.gene40807:intron | 45.0% |
| ! | TCCATCTGCCGATTATACCA+TGG | - | chr1.2:59673388-59673407 | MS.gene40807:intron | 45.0% |
| ! | TGCATTGAGTTGCATGGTTG+GGG | - | chr1.2:59675709-59675728 | MS.gene40807:intron | 45.0% |
| !! | AAAGAGTACCTTGAACCACC+AGG | + | chr1.2:59673113-59673132 | None:intergenic | 45.0% |
| !! | CCTTGGCATTTTTGGAAGCA+GGG | - | chr1.2:59674258-59674277 | MS.gene40807:intron | 45.0% |
| !! | GGGTTGACTTGAATAGAAGC+AGG | + | chr1.2:59675653-59675672 | None:intergenic | 45.0% |
| !! | TCCTTGGCATTTTTGGAAGC+AGG | - | chr1.2:59674257-59674276 | MS.gene40807:intron | 45.0% |
| AAGCGGAGCATAAGAGCGAT+TGG | + | chr1.2:59673078-59673097 | None:intergenic | 50.0% | |
| AAGGCCTTAATGCCGTCGTT+TGG | - | chr1.2:59674869-59674888 | MS.gene40807:intron | 50.0% | |
| ACGATGATGCAGGGTCAAGA+TGG | - | chr1.2:59676535-59676554 | MS.gene40807:intron | 50.0% | |
| AGAGATCGGAGAAGAGACTG+CGG | - | chr1.2:59674954-59674973 | MS.gene40807:intron | 50.0% | |
| AGCGGAGCATAAGAGCGATT+GGG | + | chr1.2:59673077-59673096 | None:intergenic | 50.0% | |
| AGCTCAGTTGCATTCGCTAG+TGG | + | chr1.2:59673829-59673848 | None:intergenic | 50.0% | |
| CACAGAAACTAGGACAGAGG+TGG | + | chr1.2:59675618-59675637 | None:intergenic | 50.0% | |
| CACCGAAGCATGGATCAAAC+TGG | - | chr1.2:59674052-59674071 | MS.gene40807:intron | 50.0% | |
| CAGGCAGCAAAAAGAGGTGA+GGG | - | chr1.2:59676065-59676084 | MS.gene40807:intron | 50.0% | |
| CCAGGATCATCGGTACTAAG+CGG | + | chr1.2:59673095-59673114 | None:intergenic | 50.0% | |
| CCCATGGTATAATCGGCAGA+TGG | + | chr1.2:59673392-59673411 | None:intergenic | 50.0% | |
| CCCTGCTTCCAAAAATGCCA+AGG | + | chr1.2:59674261-59674280 | None:intergenic | 50.0% | |
| CCTTGAACCACCAGGATCAT+CGG | + | chr1.2:59673105-59673124 | None:intergenic | 50.0% | |
| CCTTGCTCTCTGTCTCTTGT+CGG | - | chr1.2:59676458-59676477 | MS.gene40807:intron | 50.0% | |
| CCTTTGTGCTTCTCGTGAAG+GGG | - | chr1.2:59676661-59676680 | MS.gene40807:intron | 50.0% | |
| CGACAAGAGACAGAGAGCAA+GGG | + | chr1.2:59676460-59676479 | None:intergenic | 50.0% | |
| CGGAGTGTGGAAGAATCTGA+AGG | + | chr1.2:59673945-59673964 | None:intergenic | 50.0% | |
| CTAAAGCTCTCGCATGCACA+TGG | + | chr1.2:59673680-59673699 | None:intergenic | 50.0% | |
| CTTGCTCTCTGTCTCTTGTC+GGG | - | chr1.2:59676459-59676478 | MS.gene40807:intron | 50.0% | |
| CTTTGTGCTTCTCGTGAAGG+GGG | - | chr1.2:59676662-59676681 | MS.gene40807:intron | 50.0% | |
| GAATGTGGCAACCACAGTTG+AGG | - | chr1.2:59677221-59677240 | MS.gene40807:intron | 50.0% | |
| GAGAGGATATGCAGAAGGTG+TGG | + | chr1.2:59673580-59673599 | None:intergenic | 50.0% | |
| GCAACGTGCACGCACAAAAA+TGG | - | chr1.2:59674823-59674842 | MS.gene40807:intron | 50.0% | |
| GCAGCAAGAGAGTGAAGAGA+AGG | - | chr1.2:59673779-59673798 | MS.gene40807:CDS | 50.0% | |
| GCGATTGGGATTAAGAAGCG+AGG | + | chr1.2:59673063-59673082 | None:intergenic | 50.0% | |
| GGAATGGTAGTCTAGTCCCA+TGG | + | chr1.2:59673408-59673427 | None:intergenic | 50.0% | |
| GGGAAAGAGATCTCGAGTCT+TGG | - | chr1.2:59676328-59676347 | MS.gene40807:intron | 50.0% | |
| GGTATAATCGGCAGATGGAG+AGG | + | chr1.2:59673387-59673406 | None:intergenic | 50.0% | |
| TCAGATACATCCACCCATGC+TGG | + | chr1.2:59674785-59674804 | None:intergenic | 50.0% | |
| TCAGGCAGCAAAAAGAGGTG+AGG | - | chr1.2:59676064-59676083 | MS.gene40807:intron | 50.0% | |
| TGTGCAGTAGTGCCCCAAAA+GGG | - | chr1.2:59674282-59674301 | MS.gene40807:intron | 50.0% | |
| TTAACAGGAGCTCATGGTGG+GGG | + | chr1.2:59673617-59673636 | None:intergenic | 50.0% | |
| TTATCTCCTCGCAGAAGGAG+AGG | + | chr1.2:59677115-59677134 | None:intergenic | 50.0% | |
| ! | GATCTACAGAGAGGCTCTGA+AGG | + | chr1.2:59676011-59676030 | None:intergenic | 50.0% |
| ! | TCACCTCTTTTTGCTGCCTG+AGG | + | chr1.2:59676065-59676084 | None:intergenic | 50.0% |
| ! | TGATCCATGCTTCGGTGTGT+GGG | + | chr1.2:59674049-59674068 | None:intergenic | 50.0% |
| ! | TGCGAGAGCTTTAGTGCACT+AGG | - | chr1.2:59673686-59673705 | MS.gene40807:intron | 50.0% |
| ! | TTGATCCATGCTTCGGTGTG+TGG | + | chr1.2:59674050-59674069 | None:intergenic | 50.0% |
| ! | TTTAAGGCCGTCCTCAACTG+TGG | + | chr1.2:59677235-59677254 | None:intergenic | 50.0% |
| !! | AAGTCTACAGGAAGTGCTGC+CGG | + | chr1.2:59673965-59673984 | None:intergenic | 50.0% |
| !! | CTTAGTACCGATGATCCTGG+TGG | - | chr1.2:59673095-59673114 | MS.gene40807:intron | 50.0% |
| AAGGAGAGGATCTGCTGACC+TGG | + | chr1.2:59677101-59677120 | None:intergenic | 55.0% | |
| ATGTGTGGAGCTGGACCAGA+AGG | + | chr1.2:59674233-59674252 | None:intergenic | 55.0% | |
| CAGTTGCATTCGCTAGTGGC+AGG | + | chr1.2:59673825-59673844 | None:intergenic | 55.0% | |
| CATGCACATGGTCCGGGAAA+GGG | + | chr1.2:59673668-59673687 | None:intergenic | 55.0% | |
| CCGACAAGAGACAGAGAGCA+AGG | + | chr1.2:59676461-59676480 | None:intergenic | 55.0% | |
| CCGATGATCCTGGTGGTTCA+AGG | - | chr1.2:59673102-59673121 | MS.gene40807:intron | 55.0% | |
| CGAGATCTCTTTCCCGTACC+AGG | + | chr1.2:59676323-59676342 | None:intergenic | 55.0% | |
| CGGTGGTCCGGTAATCGAAT+TGG | - | chr1.2:59673031-59673050 | MS.gene40807:intron | 55.0% | |
| CTGTGCAGTAGTGCCCCAAA+AGG | - | chr1.2:59674281-59674300 | MS.gene40807:intron | 55.0% | |
| GATACATCCACCCATGCTGG+AGG | + | chr1.2:59674782-59674801 | None:intergenic | 55.0% | |
| GCCGTCGTTTGGAGATGGTA+AGG | - | chr1.2:59674880-59674899 | MS.gene40807:intron | 55.0% | |
| GGGTCAAGATGGAGTTGACC+TGG | - | chr1.2:59676546-59676565 | MS.gene40807:intron | 55.0% | |
| GTGGCAACCACAGTTGAGGA+CGG | - | chr1.2:59677225-59677244 | MS.gene40807:intron | 55.0% | |
| GTTGTCCAAGGCTCATGCGA+AGG | - | chr1.2:59674850-59674869 | MS.gene40807:intron | 55.0% | |
| TAAGGCCTTCGCATGAGCCT+TGG | + | chr1.2:59674858-59674877 | None:intergenic | 55.0% | |
| ! | CATGCTTCGGTGTGTGGGAA+CGG | + | chr1.2:59674044-59674063 | None:intergenic | 55.0% |
| ! | CCCCTTCACGAGAAGCACAA+AGG | + | chr1.2:59676664-59676683 | None:intergenic | 55.0% |
| ! | TGCGGAGACTTGCTTCTGCA+GGG | - | chr1.2:59674972-59674991 | MS.gene40807:intron | 55.0% |
| !! | CCGCTTAGTACCGATGATCC+TGG | - | chr1.2:59673092-59673111 | MS.gene40807:intron | 55.0% |
| CAATCGGTGGGACCCTTTCC+CGG | - | chr1.2:59673653-59673672 | MS.gene40807:intron | 60.0% | |
| CGTTCCCACACACCGAAGCA+TGG | - | chr1.2:59674042-59674061 | MS.gene40807:intron | 60.0% | |
| CTCTCGCATGCACATGGTCC+GGG | + | chr1.2:59673674-59673693 | None:intergenic | 60.0% | |
| CTTCTCGTGAAGGGGGTGGT+GGG | - | chr1.2:59676669-59676688 | MS.gene40807:intron | 60.0% | |
| GCAGATCCTCTCCTTCTGCG+AGG | - | chr1.2:59677106-59677125 | MS.gene40807:intron | 60.0% | |
| GCATGCACATGGTCCGGGAA+AGG | + | chr1.2:59673669-59673688 | None:intergenic | 60.0% | |
| GCGCCTCAGGCAGCAAAAAG+AGG | - | chr1.2:59676059-59676078 | MS.gene40807:intron | 60.0% | |
| GCTCTCGCATGCACATGGTC+CGG | + | chr1.2:59673675-59673694 | None:intergenic | 60.0% | |
| GGAGGCAGCCCCACAGTAAT+TGG | + | chr1.2:59674764-59674783 | None:intergenic | 60.0% | |
| TGCTTCTGCAGGGCCTTCTG+AGG | - | chr1.2:59674982-59675001 | MS.gene40807:intron | 60.0% | |
| TGTGCTTCTCGTGAAGGGGG+TGG | - | chr1.2:59676665-59676684 | MS.gene40807:intron | 60.0% | |
| TTCGCTAGTGGCAGGCCATG+TGG | + | chr1.2:59673817-59673836 | None:intergenic | 60.0% | |
| ! | CTGCGGAGACTTGCTTCTGC+AGG | - | chr1.2:59674971-59674990 | MS.gene40807:intron | 60.0% |
| !! | GGGTTGCAGAGCTCTGAGAG+AGG | + | chr1.2:59673597-59673616 | None:intergenic | 60.0% |
| CCACCGCGAGAGGAGGTAGA+CGG | + | chr1.2:59673017-59673036 | None:intergenic | 65.0% | |
| GACGGCGGCGAAGATGACGA+CGG | + | chr1.2:59672999-59673018 | None:intergenic | 65.0% | |
| GATTACCGGACCACCGCGAG+AGG | + | chr1.2:59673027-59673046 | None:intergenic | 65.0% | |
| GCGAAGATGACGACGGAGCG+CGG | + | chr1.2:59672992-59673011 | None:intergenic | 65.0% | |
| GCTTCTCGTGAAGGGGGTGG+TGG | - | chr1.2:59676668-59676687 | MS.gene40807:intron | 65.0% | |
| TACCTCCTCTCGCGGTGGTC+CGG | - | chr1.2:59673019-59673038 | MS.gene40807:intron | 65.0% | |
| TGTGGGGCTGCCTCCAGCAT+GGG | - | chr1.2:59674769-59674788 | MS.gene40807:intron | 65.0% | |
| !! | CAGGAAGTGCTGCCGGAGTG+TGG | + | chr1.2:59673958-59673977 | None:intergenic | 65.0% |
| CCGCCGTCTACCTCCTCTCG+CGG | - | chr1.2:59673011-59673030 | MS.gene40807:CDS | 70.0% | |
| CCGCGAGAGGAGGTAGACGG+CGG | + | chr1.2:59673014-59673033 | None:intergenic | 70.0% | |
| CCGTCTACCTCCTCTCGCGG+TGG | - | chr1.2:59673014-59673033 | MS.gene40807:CDS | 70.0% | |
| CTGTGGGGCTGCCTCCAGCA+TGG | - | chr1.2:59674768-59674787 | MS.gene40807:intron | 70.0% | |
| TACCGGACCACCGCGAGAGG+AGG | + | chr1.2:59673024-59673043 | None:intergenic | 70.0% | |
| GGGGCTGCCTCCAGCATGGG+TGG | - | chr1.2:59674772-59674791 | MS.gene40807:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 59672930 | 59677471 | 59672930 | ID=MS.gene40807 |
| chr1.2 | mRNA | 59672930 | 59677471 | 59672930 | ID=MS.gene40807.t1;Parent=MS.gene40807 |
| chr1.2 | exon | 59677278 | 59677471 | 59677278 | ID=MS.gene40807.t1.exon1;Parent=MS.gene40807.t1 |
| chr1.2 | CDS | 59677278 | 59677471 | 59677278 | ID=cds.MS.gene40807.t1;Parent=MS.gene40807.t1 |
| chr1.2 | exon | 59675371 | 59675653 | 59675371 | ID=MS.gene40807.t1.exon2;Parent=MS.gene40807.t1 |
| chr1.2 | CDS | 59675371 | 59675653 | 59675371 | ID=cds.MS.gene40807.t1;Parent=MS.gene40807.t1 |
| chr1.2 | exon | 59674321 | 59674410 | 59674321 | ID=MS.gene40807.t1.exon3;Parent=MS.gene40807.t1 |
| chr1.2 | CDS | 59674321 | 59674410 | 59674321 | ID=cds.MS.gene40807.t1;Parent=MS.gene40807.t1 |
| chr1.2 | exon | 59673777 | 59673854 | 59673777 | ID=MS.gene40807.t1.exon4;Parent=MS.gene40807.t1 |
| chr1.2 | CDS | 59673777 | 59673854 | 59673777 | ID=cds.MS.gene40807.t1;Parent=MS.gene40807.t1 |
| chr1.2 | exon | 59673462 | 59673539 | 59673462 | ID=MS.gene40807.t1.exon5;Parent=MS.gene40807.t1 |
| chr1.2 | CDS | 59673462 | 59673539 | 59673462 | ID=cds.MS.gene40807.t1;Parent=MS.gene40807.t1 |
| chr1.2 | exon | 59673300 | 59673365 | 59673300 | ID=MS.gene40807.t1.exon6;Parent=MS.gene40807.t1 |
| chr1.2 | CDS | 59673300 | 59673365 | 59673300 | ID=cds.MS.gene40807.t1;Parent=MS.gene40807.t1 |
| chr1.2 | exon | 59673135 | 59673215 | 59673135 | ID=MS.gene40807.t1.exon7;Parent=MS.gene40807.t1 |
| chr1.2 | CDS | 59673135 | 59673215 | 59673135 | ID=cds.MS.gene40807.t1;Parent=MS.gene40807.t1 |
| chr1.2 | exon | 59672930 | 59673037 | 59672930 | ID=MS.gene40807.t1.exon8;Parent=MS.gene40807.t1 |
| chr1.2 | CDS | 59672930 | 59673037 | 59672930 | ID=cds.MS.gene40807.t1;Parent=MS.gene40807.t1 |
| Gene Sequence |
| Protein sequence |
