Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44168.t1 | XP_024638596.1 | 99.7 | 300 | 1 | 0 | 1 | 300 | 1 | 300 | 2.40E-155 | 558.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44168.t1 | Q9SUJ1 | 76.1 | 310 | 60 | 3 | 1 | 300 | 1 | 306 | 4.8e-120 | 432.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44168.t1 | G7I9F5 | 99.7 | 300 | 1 | 0 | 1 | 300 | 1 | 300 | 1.7e-155 | 558.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056094 | MS.gene44168 | 0.972506 | 7.07E-135 | -1.69E-46 |
| MS.gene056096 | MS.gene44168 | 0.942642 | 5.01E-102 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene65117 | MS.gene44168 | PPI |
| MS.gene013657 | MS.gene44168 | PPI |
| MS.gene44168 | MS.gene003352 | PPI |
| MS.gene66057 | MS.gene44168 | PPI |
| MS.gene44168 | MS.gene22643 | PPI |
| MS.gene44168 | MS.gene22645 | PPI |
| MS.gene44168 | MS.gene81965 | PPI |
| MS.gene44168 | MS.gene02144 | PPI |
| MS.gene44168 | MS.gene062285 | PPI |
| MS.gene44168 | MS.gene017190 | PPI |
| MS.gene44168 | MS.gene02663 | PPI |
| MS.gene44168 | MS.gene78212 | PPI |
| MS.gene77217 | MS.gene44168 | PPI |
| MS.gene038424 | MS.gene44168 | PPI |
| MS.gene45857 | MS.gene44168 | PPI |
| MS.gene44168 | MS.gene059227 | PPI |
| MS.gene44168 | MS.gene02757 | PPI |
| MS.gene48256 | MS.gene44168 | PPI |
| MS.gene44168 | MS.gene052932 | PPI |
| MS.gene44168 | MS.gene82750 | PPI |
| MS.gene44168 | MS.gene065513 | PPI |
| MS.gene44168 | MS.gene50365 | PPI |
| MS.gene44168 | MS.gene027060 | PPI |
| MS.gene44168 | MS.gene48916 | PPI |
| MS.gene90588 | MS.gene44168 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44168.t1 | MTR_1g083790 | 99.667 | 300 | 1 | 0 | 1 | 300 | 1 | 300 | 0.0 | 613 |
| MS.gene44168.t1 | MTR_7g109165 | 70.068 | 294 | 83 | 4 | 1 | 291 | 1 | 292 | 9.67e-136 | 390 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44168.t1 | AT3G05710 | 76.129 | 310 | 60 | 3 | 1 | 300 | 1 | 306 | 1.03e-170 | 476 |
| MS.gene44168.t1 | AT3G05710 | 75.484 | 310 | 61 | 3 | 1 | 300 | 1 | 305 | 3.76e-168 | 469 |
| MS.gene44168.t1 | AT5G26980 | 78.477 | 302 | 58 | 5 | 1 | 300 | 1 | 297 | 3.92e-168 | 469 |
| MS.gene44168.t1 | AT5G26980 | 78.477 | 302 | 58 | 5 | 1 | 300 | 1 | 297 | 3.92e-168 | 469 |
| MS.gene44168.t1 | AT5G26980 | 78.477 | 302 | 58 | 5 | 1 | 300 | 1 | 297 | 3.92e-168 | 469 |
| MS.gene44168.t1 | AT4G02195 | 65.232 | 302 | 99 | 4 | 1 | 300 | 1 | 298 | 4.15e-138 | 393 |
Find 66 sgRNAs with CRISPR-Local
Find 319 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGACCTTCTGCAATTGTTTA+AGG | 0.154574 | 1.3:-59340594 | None:intergenic |
| GGAGGCAGCCCCACAGTAAT+TGG | 0.282740 | 1.3:-59338110 | None:intergenic |
| GGCAGAGAGAACTCAGAAAA+AGG | 0.288965 | 1.3:+59340709 | MS.gene44168:intron |
| ATCTCCAAACGACGGCATTA+AGG | 0.369271 | 1.3:-59338222 | None:intergenic |
| CTGCGGAGACTTGCTTCTGC+AGG | 0.409691 | 1.3:+59338320 | MS.gene44168:CDS |
| AGATGATGACTTGGACAATA+TGG | 0.409826 | 1.3:+59339949 | MS.gene44168:CDS |
| TACCTCCTCTCGCGGTGGTC+CGG | 0.424937 | 1.3:+59336399 | MS.gene44168:CDS |
| TTCCATTCATGTTAATCTCC+AGG | 0.430908 | 1.3:-59339910 | None:intergenic |
| TGTGGGGCTGCCTCCAGCAT+GGG | 0.434854 | 1.3:+59338118 | MS.gene44168:CDS |
| CAACTTATTTGAAGCGCCTC+AGG | 0.446869 | 1.3:+59339395 | MS.gene44168:CDS |
| GTGCTGACCAATTCGATTAC+CGG | 0.448177 | 1.3:-59336418 | None:intergenic |
| AAGGCCTTAATGCCGTCGTT+TGG | 0.451834 | 1.3:+59338218 | MS.gene44168:CDS |
| CGAGCTTGCTCAGATTATGA+AGG | 0.465210 | 1.3:+59340399 | MS.gene44168:CDS |
| TAAGGCCTTCGCATGAGCCT+TGG | 0.469990 | 1.3:-59338204 | None:intergenic |
| CCGATGATCCTGGTGGTTCA+AGG | 0.471361 | 1.3:+59336482 | MS.gene44168:CDS |
| GGGGCTGCCTCCAGCATGGG+TGG | 0.473862 | 1.3:+59338121 | MS.gene44168:CDS |
| GGTTTAAATCCAATTACTGT+GGG | 0.477788 | 1.3:+59338101 | MS.gene44168:CDS |
| CGGTGGTCCGGTAATCGAAT+TGG | 0.480133 | 1.3:+59336411 | MS.gene44168:CDS |
| TGCTTCTGCAGGGCCTTCTG+AGG | 0.500982 | 1.3:+59338331 | MS.gene44168:CDS |
| AAGCGGAGCATAAGAGCGAT+TGG | 0.501678 | 1.3:-59336455 | None:intergenic |
| CTGTGGGGCTGCCTCCAGCA+TGG | 0.507201 | 1.3:+59338117 | MS.gene44168:CDS |
| TCAGATACATCCACCCATGC+TGG | 0.509293 | 1.3:-59338131 | None:intergenic |
| TGCGGAGACTTGCTTCTGCA+GGG | 0.519709 | 1.3:+59338321 | MS.gene44168:CDS |
| GCGAAGATGACGACGGAGCA+CGG | 0.523089 | 1.3:-59336369 | None:intergenic |
| CCGCTTAGTACCGATGATCC+TGG | 0.524029 | 1.3:+59336472 | MS.gene44168:CDS |
| CTTCTGAGGATTCCAATGTC+AGG | 0.540775 | 1.3:+59338345 | MS.gene44168:CDS |
| GCCGTCGTTTGGAGATGGTA+AGG | 0.544395 | 1.3:+59338229 | MS.gene44168:CDS |
| AGCGGAGCATAAGAGCGATT+GGG | 0.546694 | 1.3:-59336454 | None:intergenic |
| TTAATGCCGTCGTTTGGAGA+TGG | 0.553207 | 1.3:+59338224 | MS.gene44168:CDS |
| AACTGACTTGATAAAGAGAT+CGG | 0.558407 | 1.3:+59338289 | MS.gene44168:CDS |
| GGGTCAAGATGGAGTTGACC+TGG | 0.559696 | 1.3:+59339892 | MS.gene44168:intron |
| GATCTACAGAGAGGCTCTGA+AGG | 0.565812 | 1.3:-59339357 | None:intergenic |
| CCTTGAACCACCAGGATCAT+CGG | 0.569373 | 1.3:-59336482 | None:intergenic |
| GACCTGGAGATTAACATGAA+TGG | 0.572532 | 1.3:+59339908 | MS.gene44168:CDS |
| ACGATGATGCAGGGTCAAGA+TGG | 0.577379 | 1.3:+59339881 | MS.gene44168:intron |
| GATATTTAACGAGCATCAGA+TGG | 0.584575 | 1.3:+59340207 | MS.gene44168:intron |
| TAAATATGAAGATGATGACT+TGG | 0.585064 | 1.3:+59339940 | MS.gene44168:CDS |
| GGGTTTAAATCCAATTACTG+TGG | 0.588018 | 1.3:+59338100 | MS.gene44168:CDS |
| ATAGTCTATTCTATCAACAA+TGG | 0.590977 | 1.3:-59340536 | None:intergenic |
| GTTGTCCAAGGCTCATGCGA+AGG | 0.595799 | 1.3:+59338199 | MS.gene44168:CDS |
| AGACTATAACATTCAGAATG+TGG | 0.601971 | 1.3:+59340552 | MS.gene44168:CDS |
| GAATGTGGCAACCACAGTTG+AGG | 0.603499 | 1.3:+59340567 | MS.gene44168:CDS |
| CTGACATTGGAATCCTCAGA+AGG | 0.605361 | 1.3:-59338344 | None:intergenic |
| GTGGCAACCACAGTTGAGGA+TGG | 0.612552 | 1.3:+59340571 | MS.gene44168:CDS |
| TACCGGACCACCGCGAGAGG+AGG | 0.619945 | 1.3:-59336401 | None:intergenic |
| CCACCGCGAGAGGAGGTAGA+CGG | 0.620622 | 1.3:-59336394 | None:intergenic |
| TTTAAGGCCATCCTCAACTG+TGG | 0.620825 | 1.3:-59340578 | None:intergenic |
| TGGCCTTAAACAATTGCAGA+AGG | 0.633448 | 1.3:+59340591 | MS.gene44168:CDS |
| AAAGAGTACCTTGAACCACC+AGG | 0.637073 | 1.3:-59336490 | None:intergenic |
| CCGTCTACCTCCTCTCGCGG+TGG | 0.646893 | 1.3:+59336394 | MS.gene44168:CDS |
| ATCAGTACTAGTCATAGACC+AGG | 0.646952 | 1.3:+59340426 | MS.gene44168:CDS |
| GATTACCGGACCACCGCGAG+AGG | 0.656759 | 1.3:-59336404 | None:intergenic |
| GATACATCCACCCATGCTGG+AGG | 0.661774 | 1.3:-59338128 | None:intergenic |
| CCGCCGTCTACCTCCTCTCG+CGG | 0.666831 | 1.3:+59336391 | MS.gene44168:CDS |
| TCGGAATCTGAATGGCGACG+AGG | 0.676673 | 1.3:+59336299 | None:intergenic |
| TTAGAGACTCAATAGCATGT+TGG | 0.680372 | 1.3:-59338256 | None:intergenic |
| AGAGATCGGAGAAGAGACTG+CGG | 0.681249 | 1.3:+59338303 | MS.gene44168:CDS |
| TCCTTACCATCTCCAAACGA+CGG | 0.691112 | 1.3:-59338230 | None:intergenic |
| CCAGGATCATCGGTACTAAG+CGG | 0.695962 | 1.3:-59336472 | None:intergenic |
| GTTTAAATCCAATTACTGTG+GGG | 0.707617 | 1.3:+59338102 | MS.gene44168:CDS |
| GCGATTGGGATTAAGAAGCG+AGG | 0.709817 | 1.3:-59336440 | None:intergenic |
| CTTAGTACCGATGATCCTGG+TGG | 0.710981 | 1.3:+59336475 | MS.gene44168:CDS |
| GACGGCGGCGAAGATGACGA+CGG | 0.733957 | 1.3:-59336376 | None:intergenic |
| CCGCGAGAGGAGGTAGACGG+CGG | 0.734166 | 1.3:-59336391 | None:intergenic |
| TCTTGCGAAGATCTACAGAG+AGG | 0.735622 | 1.3:-59339366 | None:intergenic |
| TATTGAGTCTCTAACACACG+AGG | 0.747213 | 1.3:+59338265 | MS.gene44168:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAAAATAAAATAACACA+CGG | - | chr1.3:59336604-59336623 | None:intergenic | 10.0% |
| !! | TATTAATAAATGAAAAATAG+TGG | - | chr1.3:59339453-59339472 | None:intergenic | 10.0% |
| !! | TCCAAATAATAAAATATAAA+AGG | + | chr1.3:59338615-59338634 | MS.gene44168:intron | 10.0% |
| !!! | AATAAAATTGCAATTTTTTT+AGG | + | chr1.3:59339478-59339497 | MS.gene44168:intron | 10.0% |
| !!! | ATAAAATTGCAATTTTTTTA+GGG | + | chr1.3:59339479-59339498 | MS.gene44168:intron | 10.0% |
| !!! | ATTTAATTTCATATTTTAAC+AGG | - | chr1.3:59337017-59337036 | None:intergenic | 10.0% |
| !!! | TATTTTATTCATCATTTTTT+GGG | + | chr1.3:59337906-59337925 | MS.gene44168:intron | 10.0% |
| !!! | TCCTTTTATATTTTATTATT+TGG | - | chr1.3:59338619-59338638 | None:intergenic | 10.0% |
| !!! | TTATTTTATTCATCATTTTT+TGG | + | chr1.3:59337905-59337924 | MS.gene44168:intron | 10.0% |
| !! | AAATTAAAATGATTCGAAAA+AGG | - | chr1.3:59339197-59339216 | None:intergenic | 15.0% |
| !! | AATATGAAATTAAATGCAAT+CGG | + | chr1.3:59337022-59337041 | MS.gene44168:intron | 15.0% |
| !! | AATGATTCATTAATACAAAA+AGG | + | chr1.3:59336621-59336640 | MS.gene44168:intron | 15.0% |
| !! | ATATCTAGATATAAATGATT+TGG | - | chr1.3:59340192-59340211 | None:intergenic | 15.0% |
| !! | TTTCACATAATACTTATAAA+TGG | + | chr1.3:59338399-59338418 | MS.gene44168:intron | 15.0% |
| !!! | ATGGTAATTATTTTGTTTAT+GGG | + | chr1.3:59340680-59340699 | MS.gene44168:intron | 15.0% |
| !!! | TAAAATTGCAATTTTTTTAG+GGG | + | chr1.3:59339480-59339499 | MS.gene44168:intron | 15.0% |
| !!! | TATGGTAATTATTTTGTTTA+TGG | + | chr1.3:59340679-59340698 | MS.gene44168:intron | 15.0% |
| !!! | TTTCGAATCATTTTAATTTA+TGG | + | chr1.3:59339198-59339217 | MS.gene44168:intron | 15.0% |
| !! | AAACACTAAAAAAAGAAACA+TGG | + | chr1.3:59338650-59338669 | MS.gene44168:intron | 20.0% |
| !! | AAATTAAGAGAAAAAAGATC+AGG | + | chr1.3:59337124-59337143 | MS.gene44168:intron | 20.0% |
| !! | AAATTTAGTTGACATTATTC+TGG | + | chr1.3:59338816-59338835 | MS.gene44168:intron | 20.0% |
| !! | AATCTATGTCAAAACAAAAA+TGG | + | chr1.3:59339135-59339154 | MS.gene44168:intron | 20.0% |
| !! | AGAATAATGTCAACTAAATT+TGG | - | chr1.3:59338817-59338836 | None:intergenic | 20.0% |
| !! | ATCAATCTAATTATTTGGAA+TGG | - | chr1.3:59336809-59336828 | None:intergenic | 20.0% |
| !! | TCGAGATCAAAATTAATAAT+AGG | + | chr1.3:59337511-59337530 | MS.gene44168:intron | 20.0% |
| !! | TTTAAGGAATATTATACTGA+AGG | + | chr1.3:59339754-59339773 | MS.gene44168:intron | 20.0% |
| !!! | ATTAATAATAGGTTTTCAGT+AGG | + | chr1.3:59337522-59337541 | MS.gene44168:intron | 20.0% |
| !!! | GTTTCTTTTTTTAGTGTTTA+TGG | - | chr1.3:59338649-59338668 | None:intergenic | 20.0% |
| !!! | TAGGATATTAATTGTTTTTG+CGG | + | chr1.3:59338068-59338087 | MS.gene44168:intron | 20.0% |
| ! | AAGAGAGAAATTATAATGAG+TGG | + | chr1.3:59338573-59338592 | MS.gene44168:intron | 25.0% |
| ! | AATAATAAGTCACAGAAACT+AGG | - | chr1.3:59338977-59338996 | None:intergenic | 25.0% |
| ! | AATCAAGTTAAAACCTTTGT+GGG | + | chr1.3:59338463-59338482 | MS.gene44168:intron | 25.0% |
| ! | AGAGAGAAATTATAATGAGT+GGG | + | chr1.3:59338574-59338593 | MS.gene44168:intron | 25.0% |
| ! | AGTACTCTAAATTTGAATTG+AGG | - | chr1.3:59339607-59339626 | None:intergenic | 25.0% |
| ! | AGTAGAAAAAGAAGAGAAAA+AGG | - | chr1.3:59340618-59340637 | None:intergenic | 25.0% |
| ! | ATAGTCTATTCTATCAACAA+TGG | - | chr1.3:59340539-59340558 | None:intergenic | 25.0% |
| ! | ATATGAGACTTAGTAATTGT+AGG | + | chr1.3:59338049-59338068 | MS.gene44168:intron | 25.0% |
| ! | ATGAAAATCCATATACTTAG+TGG | - | chr1.3:59339858-59339877 | None:intergenic | 25.0% |
| ! | ATTGAAAGATGAAGTCATAT+TGG | + | chr1.3:59336672-59336691 | MS.gene44168:intron | 25.0% |
| ! | GATGGATCAATCTAATTATT+TGG | - | chr1.3:59336814-59336833 | None:intergenic | 25.0% |
| ! | GCTTCAAAACAATTGTATTT+AGG | + | chr1.3:59336865-59336884 | MS.gene44168:intron | 25.0% |
| ! | GTACTCTAAATTTGAATTGA+GGG | - | chr1.3:59339606-59339625 | None:intergenic | 25.0% |
| ! | GTGAATAAGTAGGTAATAAA+CGG | - | chr1.3:59340063-59340082 | None:intergenic | 25.0% |
| ! | TAAAAGTAAAGCAAAAGGAA+TGG | + | chr1.3:59337704-59337723 | MS.gene44168:intron | 25.0% |
| ! | TAAATATGAAGATGATGACT+TGG | + | chr1.3:59339940-59339959 | MS.gene44168:CDS | 25.0% |
| ! | TAAGTTCTCACTTACAATTA+AGG | + | chr1.3:59339161-59339180 | MS.gene44168:intron | 25.0% |
| ! | TAATCAAGTTAAAACCTTTG+TGG | + | chr1.3:59338462-59338481 | MS.gene44168:intron | 25.0% |
| ! | TACAAAAAGGAAATCACATT+TGG | + | chr1.3:59336634-59336653 | MS.gene44168:intron | 25.0% |
| ! | TCATTATATCCATCTATTAC+TGG | - | chr1.3:59337864-59337883 | None:intergenic | 25.0% |
| ! | TTAACAAAGCACAAAACTAA+GGG | - | chr1.3:59339022-59339041 | None:intergenic | 25.0% |
| ! | TTACACACAATCTAAAAAGA+TGG | - | chr1.3:59336832-59336851 | None:intergenic | 25.0% |
| ! | TTTAACAAAGCACAAAACTA+AGG | - | chr1.3:59339023-59339042 | None:intergenic | 25.0% |
| ! | TTTATTACCTACTTATTCAC+CGG | + | chr1.3:59340063-59340082 | MS.gene44168:intron | 25.0% |
| !! | CTCTTCTTTTTCTACTATTT+TGG | + | chr1.3:59340622-59340641 | MS.gene44168:intron | 25.0% |
| !!! | TTCCTTTTGCTTTACTTTTA+CGG | - | chr1.3:59337704-59337723 | None:intergenic | 25.0% |
| AATATGATCATTCCATGTAC+TGG | + | chr1.3:59340119-59340138 | MS.gene44168:intron | 30.0% | |
| AATTAGAATTGCCTTGGAAA+GGG | + | chr1.3:59337929-59337948 | MS.gene44168:intron | 30.0% | |
| AGACTATAACATTCAGAATG+TGG | + | chr1.3:59340552-59340571 | MS.gene44168:CDS | 30.0% | |
| AGAGAAATTATAATGAGTGG+GGG | + | chr1.3:59338576-59338595 | MS.gene44168:intron | 30.0% | |
| AGATTCTTCCAACAACATAT+GGG | - | chr1.3:59339262-59339281 | None:intergenic | 30.0% | |
| ATCAGCATGTACATTTAGTT+AGG | - | chr1.3:59337818-59337837 | None:intergenic | 30.0% | |
| ATGAAATTAAATGCAATCGG+TGG | + | chr1.3:59337025-59337044 | MS.gene44168:intron | 30.0% | |
| ATTCTGACAATATCTCCATT+GGG | + | chr1.3:59337296-59337315 | MS.gene44168:intron | 30.0% | |
| CAATTAATGCTCAAAACTTC+CGG | - | chr1.3:59340085-59340104 | None:intergenic | 30.0% | |
| CTAAAATGTAACACACTTGA+AGG | - | chr1.3:59338842-59338861 | None:intergenic | 30.0% | |
| CTAAGGCAATAACTGAATTA+AGG | - | chr1.3:59337269-59337288 | None:intergenic | 30.0% | |
| GAGAGAAATTATAATGAGTG+GGG | + | chr1.3:59338575-59338594 | MS.gene44168:intron | 30.0% | |
| GGTTTAAATCCAATTACTGT+GGG | + | chr1.3:59338101-59338120 | MS.gene44168:CDS | 30.0% | |
| GTTACATACCACTAAGTATA+TGG | + | chr1.3:59339847-59339866 | MS.gene44168:intron | 30.0% | |
| GTTGTTGGAAGAATCTATAA+TGG | + | chr1.3:59339266-59339285 | MS.gene44168:intron | 30.0% | |
| GTTTAAATCCAATTACTGTG+GGG | + | chr1.3:59338102-59338121 | MS.gene44168:CDS | 30.0% | |
| TACAGTTTCTGTGAATATAC+TGG | - | chr1.3:59336747-59336766 | None:intergenic | 30.0% | |
| TACCGTAAAAGTAAAGCAAA+AGG | + | chr1.3:59337699-59337718 | MS.gene44168:intron | 30.0% | |
| TAGATTCTTCCAACAACATA+TGG | - | chr1.3:59339263-59339282 | None:intergenic | 30.0% | |
| TCAGCATGTACATTTAGTTA+GGG | - | chr1.3:59337817-59337836 | None:intergenic | 30.0% | |
| TGAAATTAAATGCAATCGGT+GGG | + | chr1.3:59337026-59337045 | MS.gene44168:intron | 30.0% | |
| TTCACTATTAGCTGATGATA+GGG | - | chr1.3:59339704-59339723 | None:intergenic | 30.0% | |
| TTCTTATTCTTCGAAACCAT+TGG | + | chr1.3:59337476-59337495 | MS.gene44168:intron | 30.0% | |
| TTTCTGTGAATATACTGGTA+TGG | - | chr1.3:59336742-59336761 | None:intergenic | 30.0% | |
| ! | AGAGGATGTCAATTTTCATA+AGG | - | chr1.3:59340504-59340523 | None:intergenic | 30.0% |
| ! | GAGGATGTCAATTTTCATAA+GGG | - | chr1.3:59340503-59340522 | None:intergenic | 30.0% |
| ! | GCAGATATGTGTTTTATATG+TGG | - | chr1.3:59338745-59338764 | None:intergenic | 30.0% |
| ! | TCAATGCATCTCTGTATTTT+CGG | - | chr1.3:59336342-59336361 | None:intergenic | 30.0% |
| ! | TGAGCATTTTCTTATTCTGT+TGG | + | chr1.3:59339306-59339325 | MS.gene44168:intron | 30.0% |
| ! | TTTCATTTTACGATGATGCA+GGG | + | chr1.3:59339872-59339891 | MS.gene44168:intron | 30.0% |
| ! | TTTTCATTTTACGATGATGC+AGG | + | chr1.3:59339871-59339890 | MS.gene44168:intron | 30.0% |
| !! | AACTGACTTGATAAAGAGAT+CGG | + | chr1.3:59338289-59338308 | MS.gene44168:CDS | 30.0% |
| !! | ACACCAAATAATTTGTTCTG+AGG | + | chr1.3:59338715-59338734 | MS.gene44168:intron | 30.0% |
| !! | CACCAAATAATTTGTTCTGA+GGG | + | chr1.3:59338716-59338735 | MS.gene44168:intron | 30.0% |
| !! | CTCAATTGATTCACAGTTTT+TGG | + | chr1.3:59340344-59340363 | MS.gene44168:intron | 30.0% |
| !! | TACTTGGCATTTTGCTTTTA+AGG | + | chr1.3:59339738-59339757 | MS.gene44168:intron | 30.0% |
| !!! | AGCTTCACTTTTTTTAAGCT+TGG | - | chr1.3:59340233-59340252 | None:intergenic | 30.0% |
| !!! | CAATTTTTTTAGGGGTTTAC+TGG | + | chr1.3:59339488-59339507 | MS.gene44168:intron | 30.0% |
| !!! | TGGTGATGCATTTTAGTTTT+TGG | + | chr1.3:59338419-59338438 | MS.gene44168:intron | 30.0% |
| !!! | TTTTTGGTGTTTGCTTTTAC+AGG | + | chr1.3:59340360-59340379 | MS.gene44168:intron | 30.0% |
| AAAAAGAGATCCAACAGGTA+AGG | + | chr1.3:59340269-59340288 | MS.gene44168:intron | 35.0% | |
| AAAACTTCCGGTGAATAAGT+AGG | - | chr1.3:59340073-59340092 | None:intergenic | 35.0% | |
| AACAAGTGGTGAAGTATACT+TGG | + | chr1.3:59339722-59339741 | MS.gene44168:intron | 35.0% | |
| AAGAGAAAAAAGATCAGGAG+AGG | + | chr1.3:59337129-59337148 | MS.gene44168:intron | 35.0% | |
| AAGAGAAAAAGAGATCCAAC+AGG | + | chr1.3:59340264-59340283 | MS.gene44168:CDS | 35.0% | |
| AAGTAAAGCAAAAGGAATGG+AGG | + | chr1.3:59337707-59337726 | MS.gene44168:intron | 35.0% | |
| AATTGACATCCTCTATCTAC+AGG | + | chr1.3:59340510-59340529 | MS.gene44168:intron | 35.0% | |
| AGTAGGTAATAAACGGCATA+AGG | - | chr1.3:59340056-59340075 | None:intergenic | 35.0% | |
| ATATCATACCAGTGATACCA+TGG | - | chr1.3:59338517-59338536 | None:intergenic | 35.0% | |
| ATCAGCTAATAGTGAACAAG+TGG | + | chr1.3:59339708-59339727 | MS.gene44168:intron | 35.0% | |
| ATGGATTCTCCATTCAAAAG+TGG | + | chr1.3:59338669-59338688 | MS.gene44168:intron | 35.0% | |
| ATTAGAATTGCCTTGGAAAG+GGG | + | chr1.3:59337930-59337949 | MS.gene44168:intron | 35.0% | |
| ATTCTCCATTCAAAAGTGGA+AGG | + | chr1.3:59338673-59338692 | MS.gene44168:intron | 35.0% | |
| ATTGACATCCTCTATCTACA+GGG | + | chr1.3:59340511-59340530 | MS.gene44168:intron | 35.0% | |
| CACAATCATCCAGTAATAGA+TGG | + | chr1.3:59337852-59337871 | MS.gene44168:intron | 35.0% | |
| CTTATAAAGTGAACTTCGCA+AGG | + | chr1.3:59338873-59338892 | MS.gene44168:intron | 35.0% | |
| CTTCTCCGATTGCATTTAAA+GGG | - | chr1.3:59337100-59337119 | None:intergenic | 35.0% | |
| GAAAGATGAAGTCATATTGG+AGG | + | chr1.3:59336675-59336694 | MS.gene44168:intron | 35.0% | |
| GAATTAGAATTGCCTTGGAA+AGG | + | chr1.3:59337928-59337947 | MS.gene44168:intron | 35.0% | |
| GATATTTAACGAGCATCAGA+TGG | + | chr1.3:59340207-59340226 | MS.gene44168:intron | 35.0% | |
| GATTCTGACAATATCTCCAT+TGG | + | chr1.3:59337295-59337314 | MS.gene44168:intron | 35.0% | |
| GATTTGGATTGCATTGTTGA+CGG | + | chr1.3:59336928-59336947 | MS.gene44168:intron | 35.0% | |
| GGGTTTAAATCCAATTACTG+TGG | + | chr1.3:59338100-59338119 | MS.gene44168:CDS | 35.0% | |
| GTAACATGTCATTGTCAGTT+GGG | - | chr1.3:59337791-59337810 | None:intergenic | 35.0% | |
| GTCCCTCAGAACAAATTATT+TGG | - | chr1.3:59338721-59338740 | None:intergenic | 35.0% | |
| GTTCACTATTAGCTGATGAT+AGG | - | chr1.3:59339705-59339724 | None:intergenic | 35.0% | |
| TACCAAGCAGCACTAAAAAT+AGG | - | chr1.3:59338787-59338806 | None:intergenic | 35.0% | |
| TAGACTTTAAGTGGTTGAAG+TGG | + | chr1.3:59337364-59337383 | MS.gene44168:intron | 35.0% | |
| TCTTCTCCGATTGCATTTAA+AGG | - | chr1.3:59337101-59337120 | None:intergenic | 35.0% | |
| TGTAACATGTCATTGTCAGT+TGG | - | chr1.3:59337792-59337811 | None:intergenic | 35.0% | |
| TTAGAGACTCAATAGCATGT+TGG | - | chr1.3:59338259-59338278 | None:intergenic | 35.0% | |
| TTCAACCACTTAAAGTCTAC+AGG | - | chr1.3:59337363-59337382 | None:intergenic | 35.0% | |
| TTCACATGTATGCATGTTAC+AGG | + | chr1.3:59338024-59338043 | MS.gene44168:intron | 35.0% | |
| TTCCATTCATGTTAATCTCC+AGG | - | chr1.3:59339913-59339932 | None:intergenic | 35.0% | |
| TTTGGGAATTAGAATTGCCT+TGG | + | chr1.3:59337923-59337942 | MS.gene44168:intron | 35.0% | |
| ! | AGATGATGACTTGGACAATA+TGG | + | chr1.3:59339949-59339968 | MS.gene44168:CDS | 35.0% |
| ! | CATTTGTTCCTTGGCATTTT+TGG | + | chr1.3:59337636-59337655 | MS.gene44168:intron | 35.0% |
| ! | TCTCTGTCTCTTTTGCTTTA+TGG | + | chr1.3:59340661-59340680 | MS.gene44168:intron | 35.0% |
| ! | TGAAGGAAAGATTTTCCCAA+TGG | - | chr1.3:59337314-59337333 | None:intergenic | 35.0% |
| ! | TGCTACATTTTCAATCGTGA+TGG | - | chr1.3:59337578-59337597 | None:intergenic | 35.0% |
| ! | TGTCAATTTTCATAAGGGTG+TGG | - | chr1.3:59340498-59340517 | None:intergenic | 35.0% |
| ! | TTTTCAGTAGGATGAAAGAC+TGG | + | chr1.3:59337534-59337553 | MS.gene44168:intron | 35.0% |
| !! | AAATGATTTGGTAGCATCAG+TGG | - | chr1.3:59340180-59340199 | None:intergenic | 35.0% |
| !! | AACAAGTATCGAAGTTTCGA+AGG | - | chr1.3:59337963-59337982 | None:intergenic | 35.0% |
| !! | ACAAGTATCGAAGTTTCGAA+GGG | - | chr1.3:59337962-59337981 | None:intergenic | 35.0% |
| !! | TATTTTGTTTATGGGCATGC+AGG | + | chr1.3:59340688-59340707 | MS.gene44168:intron | 35.0% |
| !! | TGCAGAAATCAAGGCATTTT+TGG | - | chr1.3:59339239-59339258 | None:intergenic | 35.0% |
| !!! | ATCCTATTTTTAGTGCTGCT+TGG | + | chr1.3:59338782-59338801 | MS.gene44168:intron | 35.0% |
| !!! | CATATTTTAACAGGAGCTCA+TGG | - | chr1.3:59337008-59337027 | None:intergenic | 35.0% |
| !!! | GACTTGTCACTTTTTTTTCC+TGG | + | chr1.3:59339648-59339667 | MS.gene44168:intron | 35.0% |
| !!! | GTCACTTTTTTTTCCTGGTA+CGG | + | chr1.3:59339653-59339672 | MS.gene44168:intron | 35.0% |
| !!! | TCACTTTTTTTTCCTGGTAC+GGG | + | chr1.3:59339654-59339673 | MS.gene44168:intron | 35.0% |
| AAAAATGGCAGAGTTGTCCA+AGG | + | chr1.3:59338187-59338206 | MS.gene44168:CDS | 40.0% | |
| AATGCCAAGGAACAAATGTG+TGG | - | chr1.3:59337634-59337653 | None:intergenic | 40.0% | |
| ACATATGGGTGCAGAAATCA+AGG | - | chr1.3:59339248-59339267 | None:intergenic | 40.0% | |
| AGAGAGCAAGGGAATAAGTA+AGG | - | chr1.3:59339795-59339814 | None:intergenic | 40.0% | |
| AGATTGAAGAGAACATGGAG+TGG | - | chr1.3:59338944-59338963 | None:intergenic | 40.0% | |
| ATCAGTACTAGTCATAGACC+AGG | + | chr1.3:59340426-59340445 | MS.gene44168:CDS | 40.0% | |
| ATTTCAGAAGTTGCACCTTC+TGG | + | chr1.3:59337601-59337620 | MS.gene44168:intron | 40.0% | |
| CAATGTCAGGAAAAATGTGC+AGG | + | chr1.3:59338358-59338377 | MS.gene44168:CDS | 40.0% | |
| CACTTCCTGTAGACTTTAAG+TGG | + | chr1.3:59337355-59337374 | MS.gene44168:intron | 40.0% | |
| CTGAGCTTAAGATCCAAGAA+CGG | + | chr1.3:59337390-59337409 | MS.gene44168:intron | 40.0% | |
| GAAATTATAATGAGTGGGGG+AGG | + | chr1.3:59338579-59338598 | MS.gene44168:intron | 40.0% | |
| GACCTGGAGATTAACATGAA+TGG | + | chr1.3:59339908-59339927 | MS.gene44168:CDS | 40.0% | |
| GAGGTGTGAAATCATCAATG+AGG | + | chr1.3:59336901-59336920 | MS.gene44168:intron | 40.0% | |
| GATTGAAGAGAACATGGAGT+GGG | - | chr1.3:59338943-59338962 | None:intergenic | 40.0% | |
| GCAGAGAGAACTCAGAAAAA+GGG | + | chr1.3:59340710-59340729 | MS.gene44168:CDS | 40.0% | |
| GGACCTTCTGCAATTGTTTA+AGG | - | chr1.3:59340597-59340616 | None:intergenic | 40.0% | |
| GTAATAACCTTGTCCGTTCT+TGG | - | chr1.3:59337406-59337425 | None:intergenic | 40.0% | |
| GTGAAATCATCAATGAGGAG+CGG | + | chr1.3:59336906-59336925 | MS.gene44168:intron | 40.0% | |
| TATTGAGTCTCTAACACACG+AGG | + | chr1.3:59338265-59338284 | MS.gene44168:CDS | 40.0% | |
| TCGATTGATGAAGAGACCAA+TGG | - | chr1.3:59337495-59337514 | None:intergenic | 40.0% | |
| TTAAGATCCAAGAACGGACA+AGG | + | chr1.3:59337396-59337415 | MS.gene44168:intron | 40.0% | |
| TTTCTGCACCCATATGTTGT+TGG | + | chr1.3:59339251-59339270 | MS.gene44168:intron | 40.0% | |
| ! | ACGGTATCAAATCTCCCTTT+TGG | - | chr1.3:59337685-59337704 | None:intergenic | 40.0% |
| ! | ATCTCTTGCATTGAGTTGCA+TGG | + | chr1.3:59339052-59339071 | MS.gene44168:intron | 40.0% |
| ! | CCATCTGCTGATTATACCAT+GGG | + | chr1.3:59336774-59336793 | MS.gene44168:intron | 40.0% |
| ! | CGGTATCAAATCTCCCTTTT+GGG | - | chr1.3:59337684-59337703 | None:intergenic | 40.0% |
| ! | CTGCACATTTTTCCTGACAT+TGG | - | chr1.3:59338360-59338379 | None:intergenic | 40.0% |
| ! | GGTATCAAATCTCCCTTTTG+GGG | - | chr1.3:59337683-59337702 | None:intergenic | 40.0% |
| ! | TCCATCTGCTGATTATACCA+TGG | + | chr1.3:59336773-59336792 | MS.gene44168:intron | 40.0% |
| ! | TGCAACTTTTCCTTACCTGT+TGG | - | chr1.3:59340282-59340301 | None:intergenic | 40.0% |
| ! | TGGCCTTAAACAATTGCAGA+AGG | + | chr1.3:59340591-59340610 | MS.gene44168:CDS | 40.0% |
| ! | TTGCATTGAGTTGCATGGTT+GGG | + | chr1.3:59339057-59339076 | MS.gene44168:intron | 40.0% |
| ! | TTTTAACAGGAGCTCATGGT+GGG | - | chr1.3:59337004-59337023 | None:intergenic | 40.0% |
| !! | ATTTTAACAGGAGCTCATGG+TGG | - | chr1.3:59337005-59337024 | None:intergenic | 40.0% |
| !! | TGTTTTTGCGGATGCAGTAA+GGG | + | chr1.3:59338080-59338099 | MS.gene44168:intron | 40.0% |
| !! | TTCGTCCTTCCACTTTTGAA+TGG | - | chr1.3:59338681-59338700 | None:intergenic | 40.0% |
| !!! | TTGTTTTTGCGGATGCAGTA+AGG | + | chr1.3:59338079-59338098 | MS.gene44168:intron | 40.0% |
| AAAGTGAACTTCGCAAGGAG+AGG | + | chr1.3:59338878-59338897 | MS.gene44168:intron | 45.0% | |
| AACTCAGAAAAAGGGAGGCA+TGG | + | chr1.3:59340718-59340737 | MS.gene44168:CDS | 45.0% | |
| AACTTCGCAAGGAGAGGATT+AGG | + | chr1.3:59338884-59338903 | MS.gene44168:intron | 45.0% | |
| AAGGAACAAATGTGTGGAGC+TGG | - | chr1.3:59337628-59337647 | None:intergenic | 45.0% | |
| AATCGACTACGTCCAGTACA+TGG | - | chr1.3:59340134-59340153 | None:intergenic | 45.0% | |
| ACCTTTGTGCTTCTCGTGAA+GGG | + | chr1.3:59340006-59340025 | MS.gene44168:intron | 45.0% | |
| AGCTCCACACATTTGTTCCT+TGG | + | chr1.3:59337627-59337646 | MS.gene44168:intron | 45.0% | |
| AGGAGAGAGAAAACTCCACA+TGG | + | chr1.3:59337185-59337204 | MS.gene44168:intron | 45.0% | |
| AGGGAAAAAACCCCTTTCCA+AGG | - | chr1.3:59337943-59337962 | None:intergenic | 45.0% | |
| AGTCACAGAAACTAGGACAG+AGG | - | chr1.3:59338970-59338989 | None:intergenic | 45.0% | |
| AGTTGTTATCTCCTCGCAGA+AGG | - | chr1.3:59340466-59340485 | None:intergenic | 45.0% | |
| AGTTTGTGATGAGCCCACAA+AGG | - | chr1.3:59338479-59338498 | None:intergenic | 45.0% | |
| ATCTCCAAACGACGGCATTA+AGG | - | chr1.3:59338225-59338244 | None:intergenic | 45.0% | |
| CAATGGTTCCCTGTAGATAG+AGG | - | chr1.3:59340522-59340541 | None:intergenic | 45.0% | |
| CCCATGGTATAATCAGCAGA+TGG | - | chr1.3:59336777-59336796 | None:intergenic | 45.0% | |
| CTAAACGAGTGACTCTACCA+TGG | + | chr1.3:59338497-59338516 | MS.gene44168:intron | 45.0% | |
| CTGACATTGGAATCCTCAGA+AGG | - | chr1.3:59338347-59338366 | None:intergenic | 45.0% | |
| CTTCAGATTCTTCCACACTC+CGG | + | chr1.3:59337329-59337348 | MS.gene44168:intron | 45.0% | |
| GACCAGTTTGATCCATGCTT+CGG | - | chr1.3:59337443-59337462 | None:intergenic | 45.0% | |
| GAGAGAACTCAGAAAAAGGG+AGG | + | chr1.3:59340713-59340732 | MS.gene44168:CDS | 45.0% | |
| GCAAGGAGAGGATTAGGAAA+AGG | + | chr1.3:59338890-59338909 | MS.gene44168:intron | 45.0% | |
| GGCAGAGAGAACTCAGAAAA+AGG | + | chr1.3:59340709-59340728 | MS.gene44168:intron | 45.0% | |
| GGCTGCCCTTTAAATGCAAT+CGG | + | chr1.3:59337092-59337111 | MS.gene44168:intron | 45.0% | |
| GGTATAATCAGCAGATGGAG+AGG | - | chr1.3:59336772-59336791 | None:intergenic | 45.0% | |
| GGTGGAGATTGAAGAGAACA+TGG | - | chr1.3:59338949-59338968 | None:intergenic | 45.0% | |
| GTCAGAATCGCTGACAAAGT+TGG | - | chr1.3:59337239-59337258 | None:intergenic | 45.0% | |
| TACCTTTGTGCTTCTCGTGA+AGG | + | chr1.3:59340005-59340024 | MS.gene44168:intron | 45.0% | |
| TCCTTACCATCTCCAAACGA+CGG | - | chr1.3:59338233-59338252 | None:intergenic | 45.0% | |
| TCTGAGAGAGGATATGCAGA+AGG | - | chr1.3:59336970-59336989 | None:intergenic | 45.0% | |
| TCTTGCGAAGATCTACAGAG+AGG | - | chr1.3:59339369-59339388 | None:intergenic | 45.0% | |
| TGACTCTACCATGGTATCAC+TGG | + | chr1.3:59338506-59338525 | MS.gene44168:intron | 45.0% | |
| TTAATGCCGTCGTTTGGAGA+TGG | + | chr1.3:59338224-59338243 | MS.gene44168:CDS | 45.0% | |
| TTATAATGAGTGGGGGAGGT+CGG | + | chr1.3:59338583-59338602 | MS.gene44168:intron | 45.0% | |
| TTGTCAGAATCGCTGAGCTA+AGG | - | chr1.3:59337286-59337305 | None:intergenic | 45.0% | |
| TTTAACAGGAGCTCATGGTG+GGG | - | chr1.3:59337003-59337022 | None:intergenic | 45.0% | |
| TTTAGGCTACGTACGATGAG+AGG | + | chr1.3:59336882-59336901 | MS.gene44168:intron | 45.0% | |
| ! | AGACTGGTTGAAATCCGTGT+TGG | + | chr1.3:59337550-59337569 | MS.gene44168:intron | 45.0% |
| ! | CAACTTATTTGAAGCGCCTC+AGG | + | chr1.3:59339395-59339414 | MS.gene44168:CDS | 45.0% |
| ! | CGAGCTTGCTCAGATTATGA+AGG | + | chr1.3:59340399-59340418 | MS.gene44168:CDS | 45.0% |
| ! | CTTCTGAGGATTCCAATGTC+AGG | + | chr1.3:59338345-59338364 | MS.gene44168:CDS | 45.0% |
| ! | CTTGCATTGAGTTGCATGGT+TGG | + | chr1.3:59339056-59339075 | MS.gene44168:intron | 45.0% |
| ! | GACTGGTTGAAATCCGTGTT+GGG | + | chr1.3:59337551-59337570 | MS.gene44168:intron | 45.0% |
| ! | GTGCTGACCAATTCGATTAC+CGG | - | chr1.3:59336421-59336440 | None:intergenic | 45.0% |
| ! | TCATCAATGAGGAGCGGATT+TGG | + | chr1.3:59336912-59336931 | MS.gene44168:intron | 45.0% |
| ! | TGCATTGAGTTGCATGGTTG+GGG | + | chr1.3:59339058-59339077 | MS.gene44168:intron | 45.0% |
| ! | TTTAAGGCCATCCTCAACTG+TGG | - | chr1.3:59340581-59340600 | None:intergenic | 45.0% |
| !! | AAAGAGTACCTTGAACCACC+AGG | - | chr1.3:59336493-59336512 | None:intergenic | 45.0% |
| !! | CCTTGGCATTTTTGGAAGCA+GGG | + | chr1.3:59337644-59337663 | MS.gene44168:intron | 45.0% |
| !! | GGGTTGACTTGAATAGAAGC+AGG | - | chr1.3:59339002-59339021 | None:intergenic | 45.0% |
| !! | TCCTTGGCATTTTTGGAAGC+AGG | + | chr1.3:59337643-59337662 | MS.gene44168:intron | 45.0% |
| AAGCGGAGCATAAGAGCGAT+TGG | - | chr1.3:59336458-59336477 | None:intergenic | 50.0% | |
| AAGGCCTTAATGCCGTCGTT+TGG | + | chr1.3:59338218-59338237 | MS.gene44168:CDS | 50.0% | |
| ACGATGATGCAGGGTCAAGA+TGG | + | chr1.3:59339881-59339900 | MS.gene44168:intron | 50.0% | |
| AGAGATCGGAGAAGAGACTG+CGG | + | chr1.3:59338303-59338322 | MS.gene44168:CDS | 50.0% | |
| AGCGGAGCATAAGAGCGATT+GGG | - | chr1.3:59336457-59336476 | None:intergenic | 50.0% | |
| AGCTCAGTTGCATTCGCTAG+TGG | - | chr1.3:59337215-59337234 | None:intergenic | 50.0% | |
| CACAGAAACTAGGACAGAGG+TGG | - | chr1.3:59338967-59338986 | None:intergenic | 50.0% | |
| CACCGAAGCATGGATCAAAC+TGG | + | chr1.3:59337438-59337457 | MS.gene44168:intron | 50.0% | |
| CAGGCAGCAAAAAGAGGTGA+GGG | + | chr1.3:59339414-59339433 | MS.gene44168:intron | 50.0% | |
| CCAGGATCATCGGTACTAAG+CGG | - | chr1.3:59336475-59336494 | None:intergenic | 50.0% | |
| CCCTGCTTCCAAAAATGCCA+AGG | - | chr1.3:59337647-59337666 | None:intergenic | 50.0% | |
| CCTTGAACCACCAGGATCAT+CGG | - | chr1.3:59336485-59336504 | None:intergenic | 50.0% | |
| CCTTGCTCTCTGTCTCTTGT+CGG | + | chr1.3:59339804-59339823 | MS.gene44168:intron | 50.0% | |
| CCTTTGTGCTTCTCGTGAAG+GGG | + | chr1.3:59340007-59340026 | MS.gene44168:intron | 50.0% | |
| CGACAAGAGACAGAGAGCAA+GGG | - | chr1.3:59339806-59339825 | None:intergenic | 50.0% | |
| CGGAGTGTGGAAGAATCTGA+AGG | - | chr1.3:59337331-59337350 | None:intergenic | 50.0% | |
| CTAAAGCTCTCGCATGCACA+TGG | - | chr1.3:59337065-59337084 | None:intergenic | 50.0% | |
| CTTGCTCTCTGTCTCTTGTC+GGG | + | chr1.3:59339805-59339824 | MS.gene44168:intron | 50.0% | |
| CTTTGTGCTTCTCGTGAAGG+GGG | + | chr1.3:59340008-59340027 | MS.gene44168:intron | 50.0% | |
| GAATGTGGCAACCACAGTTG+AGG | + | chr1.3:59340567-59340586 | MS.gene44168:CDS | 50.0% | |
| GCAACGTGCACGCACAAAAA+TGG | + | chr1.3:59338172-59338191 | MS.gene44168:CDS | 50.0% | |
| GCAGCAAGAGAGTGAAGAGA+AGG | + | chr1.3:59337165-59337184 | MS.gene44168:intron | 50.0% | |
| GCGATTGGGATTAAGAAGCG+AGG | - | chr1.3:59336443-59336462 | None:intergenic | 50.0% | |
| GGAATGGTAGTCTAGTCCCA+TGG | - | chr1.3:59336793-59336812 | None:intergenic | 50.0% | |
| GGGAAAGAGATCTCGAGTCT+TGG | + | chr1.3:59339674-59339693 | MS.gene44168:intron | 50.0% | |
| TCAGATACATCCACCCATGC+TGG | - | chr1.3:59338134-59338153 | None:intergenic | 50.0% | |
| TCAGGCAGCAAAAAGAGGTG+AGG | + | chr1.3:59339413-59339432 | MS.gene44168:intron | 50.0% | |
| TGTGCAGTAGTGCCCCAAAA+GGG | + | chr1.3:59337668-59337687 | MS.gene44168:intron | 50.0% | |
| TTAACAGGAGCTCATGGTGG+GGG | - | chr1.3:59337002-59337021 | None:intergenic | 50.0% | |
| TTATCTCCTCGCAGAAGGAG+AGG | - | chr1.3:59340461-59340480 | None:intergenic | 50.0% | |
| ! | GATCTACAGAGAGGCTCTGA+AGG | - | chr1.3:59339360-59339379 | None:intergenic | 50.0% |
| ! | TCACCTCTTTTTGCTGCCTG+AGG | - | chr1.3:59339414-59339433 | None:intergenic | 50.0% |
| ! | TGATCCATGCTTCGGTGTGT+GGG | - | chr1.3:59337435-59337454 | None:intergenic | 50.0% |
| ! | TGCGAGAGCTTTAGTGCACT+AGG | + | chr1.3:59337071-59337090 | MS.gene44168:intron | 50.0% |
| ! | TTGATCCATGCTTCGGTGTG+TGG | - | chr1.3:59337436-59337455 | None:intergenic | 50.0% |
| !! | AAGTCTACAGGAAGTGCTGC+CGG | - | chr1.3:59337351-59337370 | None:intergenic | 50.0% |
| !! | CAATCGTGATGGACCCAACA+CGG | - | chr1.3:59337567-59337586 | None:intergenic | 50.0% |
| !! | CTTAGTACCGATGATCCTGG+TGG | + | chr1.3:59336475-59336494 | MS.gene44168:CDS | 50.0% |
| AAGGAGAGGATCTGCTGACC+TGG | - | chr1.3:59340447-59340466 | None:intergenic | 55.0% | |
| ATGTGTGGAGCTGGACCAGA+AGG | - | chr1.3:59337619-59337638 | None:intergenic | 55.0% | |
| CAGTTGCATTCGCTAGTGGC+AGG | - | chr1.3:59337211-59337230 | None:intergenic | 55.0% | |
| CATGCACATGGTCCGGGAAA+GGG | - | chr1.3:59337053-59337072 | None:intergenic | 55.0% | |
| CCGACAAGAGACAGAGAGCA+AGG | - | chr1.3:59339807-59339826 | None:intergenic | 55.0% | |
| CCGATGATCCTGGTGGTTCA+AGG | + | chr1.3:59336482-59336501 | MS.gene44168:CDS | 55.0% | |
| CGAGATCTCTTTCCCGTACC+AGG | - | chr1.3:59339669-59339688 | None:intergenic | 55.0% | |
| CGGTGGTCCGGTAATCGAAT+TGG | + | chr1.3:59336411-59336430 | MS.gene44168:CDS | 55.0% | |
| CTGTGCAGTAGTGCCCCAAA+AGG | + | chr1.3:59337667-59337686 | MS.gene44168:intron | 55.0% | |
| GATACATCCACCCATGCTGG+AGG | - | chr1.3:59338131-59338150 | None:intergenic | 55.0% | |
| GCCGTCGTTTGGAGATGGTA+AGG | + | chr1.3:59338229-59338248 | MS.gene44168:CDS | 55.0% | |
| GGGTCAAGATGGAGTTGACC+TGG | + | chr1.3:59339892-59339911 | MS.gene44168:intron | 55.0% | |
| GTGGCAACCACAGTTGAGGA+TGG | + | chr1.3:59340571-59340590 | MS.gene44168:CDS | 55.0% | |
| GTTGTCCAAGGCTCATGCGA+AGG | + | chr1.3:59338199-59338218 | MS.gene44168:CDS | 55.0% | |
| TAAGGCCTTCGCATGAGCCT+TGG | - | chr1.3:59338207-59338226 | None:intergenic | 55.0% | |
| ! | CATGCTTCGGTGTGTGGGAA+CGG | - | chr1.3:59337430-59337449 | None:intergenic | 55.0% |
| ! | CCCCTTCACGAGAAGCACAA+AGG | - | chr1.3:59340010-59340029 | None:intergenic | 55.0% |
| ! | TGCGGAGACTTGCTTCTGCA+GGG | + | chr1.3:59338321-59338340 | MS.gene44168:CDS | 55.0% |
| !! | CCGCTTAGTACCGATGATCC+TGG | + | chr1.3:59336472-59336491 | MS.gene44168:CDS | 55.0% |
| CAATCGGTGGGACCCTTTCC+CGG | + | chr1.3:59337038-59337057 | MS.gene44168:intron | 60.0% | |
| CGTTCCCACACACCGAAGCA+TGG | + | chr1.3:59337428-59337447 | MS.gene44168:intron | 60.0% | |
| CTCTCGCATGCACATGGTCC+GGG | - | chr1.3:59337059-59337078 | None:intergenic | 60.0% | |
| CTTCTCGTGAAGGGGGTGGT+GGG | + | chr1.3:59340015-59340034 | MS.gene44168:intron | 60.0% | |
| GCAGATCCTCTCCTTCTGCG+AGG | + | chr1.3:59340452-59340471 | MS.gene44168:intron | 60.0% | |
| GCATGCACATGGTCCGGGAA+AGG | - | chr1.3:59337054-59337073 | None:intergenic | 60.0% | |
| GCGAAGATGACGACGGAGCA+CGG | - | chr1.3:59336372-59336391 | None:intergenic | 60.0% | |
| GCGCCTCAGGCAGCAAAAAG+AGG | + | chr1.3:59339408-59339427 | MS.gene44168:CDS | 60.0% | |
| GCTCTCGCATGCACATGGTC+CGG | - | chr1.3:59337060-59337079 | None:intergenic | 60.0% | |
| GGAGGCAGCCCCACAGTAAT+TGG | - | chr1.3:59338113-59338132 | None:intergenic | 60.0% | |
| TGCTTCTGCAGGGCCTTCTG+AGG | + | chr1.3:59338331-59338350 | MS.gene44168:CDS | 60.0% | |
| TGTGCTTCTCGTGAAGGGGG+TGG | + | chr1.3:59340011-59340030 | MS.gene44168:intron | 60.0% | |
| TTCGCTAGTGGCAGGCCATG+TGG | - | chr1.3:59337203-59337222 | None:intergenic | 60.0% | |
| ! | CTGCGGAGACTTGCTTCTGC+AGG | + | chr1.3:59338320-59338339 | MS.gene44168:CDS | 60.0% |
| !! | GGGTTGCAGAGCTCTGAGAG+AGG | - | chr1.3:59336982-59337001 | None:intergenic | 60.0% |
| CCACCGCGAGAGGAGGTAGA+CGG | - | chr1.3:59336397-59336416 | None:intergenic | 65.0% | |
| GACGGCGGCGAAGATGACGA+CGG | - | chr1.3:59336379-59336398 | None:intergenic | 65.0% | |
| GATTACCGGACCACCGCGAG+AGG | - | chr1.3:59336407-59336426 | None:intergenic | 65.0% | |
| GCTTCTCGTGAAGGGGGTGG+TGG | + | chr1.3:59340014-59340033 | MS.gene44168:intron | 65.0% | |
| TACCTCCTCTCGCGGTGGTC+CGG | + | chr1.3:59336399-59336418 | MS.gene44168:CDS | 65.0% | |
| TGTGGGGCTGCCTCCAGCAT+GGG | + | chr1.3:59338118-59338137 | MS.gene44168:CDS | 65.0% | |
| !! | CAGGAAGTGCTGCCGGAGTG+TGG | - | chr1.3:59337344-59337363 | None:intergenic | 65.0% |
| CCGCCGTCTACCTCCTCTCG+CGG | + | chr1.3:59336391-59336410 | MS.gene44168:CDS | 70.0% | |
| CCGCGAGAGGAGGTAGACGG+CGG | - | chr1.3:59336394-59336413 | None:intergenic | 70.0% | |
| CCGTCTACCTCCTCTCGCGG+TGG | + | chr1.3:59336394-59336413 | MS.gene44168:CDS | 70.0% | |
| CTGTGGGGCTGCCTCCAGCA+TGG | + | chr1.3:59338117-59338136 | MS.gene44168:CDS | 70.0% | |
| TACCGGACCACCGCGAGAGG+AGG | - | chr1.3:59336404-59336423 | None:intergenic | 70.0% | |
| GGGGCTGCCTCCAGCATGGG+TGG | + | chr1.3:59338121-59338140 | MS.gene44168:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 59336310 | 59340739 | 59336310 | ID=MS.gene44168 |
| chr1.3 | mRNA | 59336310 | 59340739 | 59336310 | ID=MS.gene44168.t1;Parent=MS.gene44168 |
| chr1.3 | exon | 59336310 | 59336503 | 59336310 | ID=MS.gene44168.t1.exon1;Parent=MS.gene44168.t1 |
| chr1.3 | CDS | 59336310 | 59336503 | 59336310 | ID=cds.MS.gene44168.t1;Parent=MS.gene44168.t1 |
| chr1.3 | exon | 59338097 | 59338379 | 59338097 | ID=MS.gene44168.t1.exon2;Parent=MS.gene44168.t1 |
| chr1.3 | CDS | 59338097 | 59338379 | 59338097 | ID=cds.MS.gene44168.t1;Parent=MS.gene44168.t1 |
| chr1.3 | exon | 59339340 | 59339429 | 59339340 | ID=MS.gene44168.t1.exon3;Parent=MS.gene44168.t1 |
| chr1.3 | CDS | 59339340 | 59339429 | 59339340 | ID=cds.MS.gene44168.t1;Parent=MS.gene44168.t1 |
| chr1.3 | exon | 59339893 | 59339970 | 59339893 | ID=MS.gene44168.t1.exon4;Parent=MS.gene44168.t1 |
| chr1.3 | CDS | 59339893 | 59339970 | 59339893 | ID=cds.MS.gene44168.t1;Parent=MS.gene44168.t1 |
| chr1.3 | exon | 59340208 | 59340285 | 59340208 | ID=MS.gene44168.t1.exon5;Parent=MS.gene44168.t1 |
| chr1.3 | CDS | 59340208 | 59340285 | 59340208 | ID=cds.MS.gene44168.t1;Parent=MS.gene44168.t1 |
| chr1.3 | exon | 59340382 | 59340447 | 59340382 | ID=MS.gene44168.t1.exon6;Parent=MS.gene44168.t1 |
| chr1.3 | CDS | 59340382 | 59340447 | 59340382 | ID=cds.MS.gene44168.t1;Parent=MS.gene44168.t1 |
| chr1.3 | exon | 59340532 | 59340612 | 59340532 | ID=MS.gene44168.t1.exon7;Parent=MS.gene44168.t1 |
| chr1.3 | CDS | 59340532 | 59340612 | 59340532 | ID=cds.MS.gene44168.t1;Parent=MS.gene44168.t1 |
| chr1.3 | exon | 59340710 | 59340739 | 59340710 | ID=MS.gene44168.t1.exon8;Parent=MS.gene44168.t1 |
| chr1.3 | CDS | 59340710 | 59340739 | 59340710 | ID=cds.MS.gene44168.t1;Parent=MS.gene44168.t1 |
| Gene Sequence |
| Protein sequence |
