Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056096.t1 | XP_024638596.1 | 95.7 | 301 | 7 | 1 | 1 | 295 | 1 | 301 | 6.50E-148 | 533.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056096.t1 | Q9SUJ1 | 74.3 | 311 | 60 | 4 | 1 | 295 | 1 | 307 | 3.1e-114 | 412.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056096.t1 | G7I9F5 | 95.7 | 301 | 7 | 1 | 1 | 295 | 1 | 301 | 4.7e-148 | 533.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056094 | MS.gene056096 | 0.95889 | 7.65E-117 | -1.69E-46 |
| MS.gene056096 | MS.gene44168 | 0.942642 | 5.01E-102 | -1.69E-46 |
| MS.gene056096 | MS.gene44169 | 0.952138 | 4.62E-110 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene78212 | MS.gene056096 | PPI |
| MS.gene056096 | MS.gene065513 | PPI |
| MS.gene48916 | MS.gene056096 | PPI |
| MS.gene056096 | MS.gene027060 | PPI |
| MS.gene038424 | MS.gene056096 | PPI |
| MS.gene45857 | MS.gene056096 | PPI |
| MS.gene052932 | MS.gene056096 | PPI |
| MS.gene22643 | MS.gene056096 | PPI |
| MS.gene48256 | MS.gene056096 | PPI |
| MS.gene77217 | MS.gene056096 | PPI |
| MS.gene90588 | MS.gene056096 | PPI |
| MS.gene056096 | MS.gene22645 | PPI |
| MS.gene65117 | MS.gene056096 | PPI |
| MS.gene02663 | MS.gene056096 | PPI |
| MS.gene056096 | MS.gene02144 | PPI |
| MS.gene66057 | MS.gene056096 | PPI |
| MS.gene81965 | MS.gene056096 | PPI |
| MS.gene056096 | MS.gene017190 | PPI |
| MS.gene003352 | MS.gene056096 | PPI |
| MS.gene013657 | MS.gene056096 | PPI |
| MS.gene056096 | MS.gene50365 | PPI |
| MS.gene82750 | MS.gene056096 | PPI |
| MS.gene056096 | MS.gene059227 | PPI |
| MS.gene062285 | MS.gene056096 | PPI |
| MS.gene056096 | MS.gene02757 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056096.t1 | MTR_1g083790 | 95.681 | 301 | 7 | 1 | 1 | 295 | 1 | 301 | 0.0 | 580 |
| MS.gene056096.t1 | MTR_7g109165 | 67.918 | 293 | 83 | 5 | 1 | 284 | 1 | 291 | 1.40e-126 | 367 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056096.t1 | AT3G05710 | 72.897 | 321 | 64 | 5 | 1 | 302 | 1 | 317 | 5.19e-161 | 452 |
| MS.gene056096.t1 | AT5G26980 | 74.679 | 312 | 65 | 6 | 1 | 302 | 1 | 308 | 8.98e-159 | 446 |
| MS.gene056096.t1 | AT5G26980 | 74.679 | 312 | 65 | 6 | 1 | 302 | 1 | 308 | 8.98e-159 | 446 |
| MS.gene056096.t1 | AT5G26980 | 74.679 | 312 | 65 | 6 | 1 | 302 | 1 | 308 | 8.98e-159 | 446 |
| MS.gene056096.t1 | AT3G05710 | 72.274 | 321 | 65 | 5 | 1 | 302 | 1 | 316 | 1.39e-158 | 446 |
| MS.gene056096.t1 | AT4G02195 | 64.026 | 303 | 97 | 6 | 1 | 295 | 1 | 299 | 5.25e-130 | 373 |
Find 65 sgRNAs with CRISPR-Local
Find 375 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGACCTTCTGCAATTGTTTA+AGG | 0.154574 | 1.3:-59368159 | None:intergenic |
| GGAGGCAGCCCCACAGTAAT+TGG | 0.282740 | 1.3:-59365679 | None:intergenic |
| GGCAGAGAGAACTCAGAAAA+AGG | 0.288965 | 1.3:+59368274 | MS.gene056096:intron |
| ATCTCCAAACGACGGCATTA+AGG | 0.369271 | 1.3:-59365791 | None:intergenic |
| CTGCGGAGACTTGCTTCTGC+AGG | 0.409691 | 1.3:+59365889 | MS.gene056096:CDS |
| AGATGATGACTTGGACAATA+TGG | 0.409826 | 1.3:+59367515 | MS.gene056096:CDS |
| TACCTCCTCTCGCGGTGGTC+CGG | 0.424937 | 1.3:+59363969 | MS.gene056096:CDS |
| TTCCATTCATGTTAATCTCC+AGG | 0.430908 | 1.3:-59367476 | None:intergenic |
| TGTGGGGCTGCCTCCAGCAT+GGG | 0.434854 | 1.3:+59365687 | MS.gene056096:CDS |
| CAACTTATTTGAAGCGCCTC+AGG | 0.446869 | 1.3:+59366962 | MS.gene056096:CDS |
| GTGCTGACCAATTCGATTAC+CGG | 0.448177 | 1.3:-59363988 | None:intergenic |
| AAGGCCTTAATGCCGTCGTT+TGG | 0.451834 | 1.3:+59365787 | MS.gene056096:CDS |
| CGAGCTTGCTCAGATTATGA+AGG | 0.465210 | 1.3:+59367964 | MS.gene056096:CDS |
| TAAGGCCTTCGCATGAGCCT+TGG | 0.469990 | 1.3:-59365773 | None:intergenic |
| CCGATGATCCTGGTGGTTCA+AGG | 0.471361 | 1.3:+59364052 | MS.gene056096:CDS |
| GGGGCTGCCTCCAGCATGGG+TGG | 0.473862 | 1.3:+59365690 | MS.gene056096:CDS |
| GGTTTAAATCCAATTACTGT+GGG | 0.477788 | 1.3:+59365670 | MS.gene056096:CDS |
| CGGTGGTCCGGTAATCGAAT+TGG | 0.480133 | 1.3:+59363981 | MS.gene056096:CDS |
| TGCTTCTGCAGGGCCTTCTG+AGG | 0.500982 | 1.3:+59365900 | MS.gene056096:CDS |
| AAGCGGAGCATAAGAGCGAT+TGG | 0.501678 | 1.3:-59364025 | None:intergenic |
| CTGTGGGGCTGCCTCCAGCA+TGG | 0.507201 | 1.3:+59365686 | MS.gene056096:CDS |
| TCAGATACATCCACCCATGC+TGG | 0.509293 | 1.3:-59365700 | None:intergenic |
| TGCGGAGACTTGCTTCTGCA+GGG | 0.519709 | 1.3:+59365890 | MS.gene056096:CDS |
| GCGAAGATGACGACGGAGCA+CGG | 0.523089 | 1.3:-59363939 | None:intergenic |
| CCGCTTAGTACCGATGATCC+TGG | 0.524029 | 1.3:+59364042 | MS.gene056096:CDS |
| CTTCTGAGGATTCCAATGTC+AGG | 0.540775 | 1.3:+59365914 | MS.gene056096:CDS |
| GCCGTCGTTTGGAGATGGTA+AGG | 0.544395 | 1.3:+59365798 | MS.gene056096:CDS |
| AGCGGAGCATAAGAGCGATT+GGG | 0.546694 | 1.3:-59364024 | None:intergenic |
| TTAATGCCGTCGTTTGGAGA+TGG | 0.553207 | 1.3:+59365793 | MS.gene056096:CDS |
| AACTGACTTGATAAAGAGAT+CGG | 0.558407 | 1.3:+59365858 | MS.gene056096:CDS |
| GGGTCAAGATGGAGTTGACC+TGG | 0.559696 | 1.3:+59367458 | MS.gene056096:intron |
| GATCTACAGAGAGGCTCTGA+AGG | 0.565812 | 1.3:-59366924 | None:intergenic |
| CCTTGAACCACCAGGATCAT+CGG | 0.569373 | 1.3:-59364052 | None:intergenic |
| GACCTGGAGATTAACATGAA+TGG | 0.572532 | 1.3:+59367474 | MS.gene056096:CDS |
| ACGATGATGCAGGGTCAAGA+TGG | 0.577379 | 1.3:+59367447 | MS.gene056096:intron |
| TAAATATGAAGATGATGACT+TGG | 0.585064 | 1.3:+59367506 | MS.gene056096:CDS |
| GGGTTTAAATCCAATTACTG+TGG | 0.588018 | 1.3:+59365669 | MS.gene056096:CDS |
| ATAGTCTATTCTATCAACAA+TGG | 0.590977 | 1.3:-59368101 | None:intergenic |
| GTTGTCCAAGGCTCATGCGA+AGG | 0.595799 | 1.3:+59365768 | MS.gene056096:CDS |
| AGACTATAACATTCAGAATG+TGG | 0.601971 | 1.3:+59368117 | MS.gene056096:CDS |
| GAATGTGGCAACCACAGTTG+AGG | 0.603499 | 1.3:+59368132 | MS.gene056096:CDS |
| CTGACATTGGAATCCTCAGA+AGG | 0.605361 | 1.3:-59365913 | None:intergenic |
| GTGGCAACCACAGTTGAGGA+TGG | 0.612552 | 1.3:+59368136 | MS.gene056096:CDS |
| TACCGGACCACCGCGAGAGG+AGG | 0.619945 | 1.3:-59363971 | None:intergenic |
| CCACCGCGAGAGGAGGTAGA+CGG | 0.620622 | 1.3:-59363964 | None:intergenic |
| TTTAAGGCCATCCTCAACTG+TGG | 0.620825 | 1.3:-59368143 | None:intergenic |
| TGGCCTTAAACAATTGCAGA+AGG | 0.633448 | 1.3:+59368156 | MS.gene056096:CDS |
| AAAGAGTACCTTGAACCACC+AGG | 0.637073 | 1.3:-59364060 | None:intergenic |
| CCGTCTACCTCCTCTCGCGG+TGG | 0.646893 | 1.3:+59363964 | MS.gene056096:CDS |
| ATCAGTACTAGTCATAGACC+AGG | 0.646952 | 1.3:+59367991 | MS.gene056096:CDS |
| GATTACCGGACCACCGCGAG+AGG | 0.656759 | 1.3:-59363974 | None:intergenic |
| GATACATCCACCCATGCTGG+AGG | 0.661774 | 1.3:-59365697 | None:intergenic |
| CCGCCGTCTACCTCCTCTCG+CGG | 0.666831 | 1.3:+59363961 | MS.gene056096:CDS |
| TCGGAATCTGAATGGCGACG+AGG | 0.676673 | 1.3:+59363869 | None:intergenic |
| TTAGAGACTCAATAGCATGT+TGG | 0.680372 | 1.3:-59365825 | None:intergenic |
| AGAGATCGGAGAAGAGACTG+CGG | 0.681249 | 1.3:+59365872 | MS.gene056096:CDS |
| TCCTTACCATCTCCAAACGA+CGG | 0.691112 | 1.3:-59365799 | None:intergenic |
| CCAGGATCATCGGTACTAAG+CGG | 0.695962 | 1.3:-59364042 | None:intergenic |
| GTTTAAATCCAATTACTGTG+GGG | 0.707617 | 1.3:+59365671 | MS.gene056096:CDS |
| GCGATTGGGATTAAGAAGCG+AGG | 0.709817 | 1.3:-59364010 | None:intergenic |
| CTTAGTACCGATGATCCTGG+TGG | 0.710981 | 1.3:+59364045 | MS.gene056096:CDS |
| GACGGCGGCGAAGATGACGA+CGG | 0.733957 | 1.3:-59363946 | None:intergenic |
| CCGCGAGAGGAGGTAGACGG+CGG | 0.734166 | 1.3:-59363961 | None:intergenic |
| TCTTGCGAAGATCTACAGAG+AGG | 0.735622 | 1.3:-59366933 | None:intergenic |
| TATTGAGTCTCTAACACACG+AGG | 0.747213 | 1.3:+59365834 | MS.gene056096:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAAAATAAAATAACACA+CGG | - | chr1.3:59364174-59364193 | None:intergenic | 10.0% |
| !! | TATTAATAAATGAAAAATAG+TGG | - | chr1.3:59367020-59367039 | None:intergenic | 10.0% |
| !! | TCCAAATAATAAAATATAAA+AGG | + | chr1.3:59366184-59366203 | MS.gene056096:intron | 10.0% |
| !!! | AATAAAATTGCAATTTTTTT+AGG | + | chr1.3:59367045-59367064 | MS.gene056096:intron | 10.0% |
| !!! | ATAAAATTGCAATTTTTTTA+GGG | + | chr1.3:59367046-59367065 | MS.gene056096:intron | 10.0% |
| !!! | ATTTAATTTCATATTTTAAC+AGG | - | chr1.3:59364587-59364606 | None:intergenic | 10.0% |
| !!! | TATTTTATTCATCATTTTTT+GGG | + | chr1.3:59365475-59365494 | MS.gene056096:intron | 10.0% |
| !!! | TCCTTTTATATTTTATTATT+TGG | - | chr1.3:59366188-59366207 | None:intergenic | 10.0% |
| !!! | TTATTTTATTCATCATTTTT+TGG | + | chr1.3:59365474-59365493 | MS.gene056096:intron | 10.0% |
| !! | AAAAATCATAATAAAAATGG+AGG | + | chr1.3:59368852-59368871 | MS.gene056096:intron | 15.0% |
| !! | AAATTAAAATGATTCGAAAA+AGG | - | chr1.3:59366764-59366783 | None:intergenic | 15.0% |
| !! | AATATGAAATTAAATGCAAT+CGG | + | chr1.3:59364592-59364611 | MS.gene056096:intron | 15.0% |
| !! | AATGATTCATTAATACAAAA+AGG | + | chr1.3:59364191-59364210 | MS.gene056096:intron | 15.0% |
| !! | ATATCTAGATATAAATGATT+TGG | - | chr1.3:59367758-59367777 | None:intergenic | 15.0% |
| !! | TATCCTATTCTTTATAATAT+TGG | + | chr1.3:59368400-59368419 | MS.gene056096:intron | 15.0% |
| !! | TTTCACATAATACTTATAAA+TGG | + | chr1.3:59365968-59365987 | MS.gene056096:intron | 15.0% |
| !!! | ATGGTAATTATTTTGTTTAT+GGG | + | chr1.3:59368245-59368264 | MS.gene056096:intron | 15.0% |
| !!! | TAAAATTGCAATTTTTTTAG+GGG | + | chr1.3:59367047-59367066 | MS.gene056096:intron | 15.0% |
| !!! | TATGGTAATTATTTTGTTTA+TGG | + | chr1.3:59368244-59368263 | MS.gene056096:intron | 15.0% |
| !!! | TTTCGAATCATTTTAATTTA+TGG | + | chr1.3:59366765-59366784 | MS.gene056096:intron | 15.0% |
| !! | AAAAAAAAGTAGTAGCAATT+AGG | - | chr1.3:59369024-59369043 | None:intergenic | 20.0% |
| !! | AAATTAAGAGAAAAAAGATC+AGG | + | chr1.3:59364694-59364713 | MS.gene056096:intron | 20.0% |
| !! | AAATTTAGTTGACATTATTC+TGG | + | chr1.3:59366384-59366403 | MS.gene056096:intron | 20.0% |
| !! | AATCTATGTCAAAACAAAAA+TGG | + | chr1.3:59366702-59366721 | MS.gene056096:intron | 20.0% |
| !! | AGAATAATGTCAACTAAATT+TGG | - | chr1.3:59366385-59366404 | None:intergenic | 20.0% |
| !! | ATCAATCTAATTATTTGGAA+TGG | - | chr1.3:59364379-59364398 | None:intergenic | 20.0% |
| !! | CAACACAAATAAACAATAAT+TGG | - | chr1.3:59369075-59369094 | None:intergenic | 20.0% |
| !! | TAAACACTAAAAAAGAAACA+TGG | + | chr1.3:59366218-59366237 | MS.gene056096:intron | 20.0% |
| !! | TCGAGATCAAAATTAATAAT+AGG | + | chr1.3:59365081-59365100 | MS.gene056096:intron | 20.0% |
| !! | TGACCAATATTATAAAGAAT+AGG | - | chr1.3:59368406-59368425 | None:intergenic | 20.0% |
| !! | TTTAAGGAATATTATACTGA+AGG | + | chr1.3:59367320-59367339 | MS.gene056096:intron | 20.0% |
| !!! | ATTAATAATAGGTTTTCAGT+AGG | + | chr1.3:59365092-59365111 | MS.gene056096:intron | 20.0% |
| !!! | GTTATTTTTTAAGAACCTAA+CGG | + | chr1.3:59368994-59369013 | MS.gene056096:intron | 20.0% |
| !!! | TAGGATATTAATTGTTTTTG+CGG | + | chr1.3:59365637-59365656 | MS.gene056096:intron | 20.0% |
| !!! | TGTTTCTTTTTTAGTGTTTA+TGG | - | chr1.3:59366218-59366237 | None:intergenic | 20.0% |
| ! | AAATCCAGAAAATGTAAAGA+GGG | + | chr1.3:59368681-59368700 | MS.gene056096:intron | 25.0% |
| ! | AAGAGAGAAATTATAATGAG+TGG | + | chr1.3:59366142-59366161 | MS.gene056096:intron | 25.0% |
| ! | AATAATAAGTCACAGAAACT+AGG | - | chr1.3:59366544-59366563 | None:intergenic | 25.0% |
| ! | AATCAAGTTAAAACCTTTGT+GGG | + | chr1.3:59366032-59366051 | MS.gene056096:intron | 25.0% |
| ! | AATTTATAAATGCGGATGAT+TGG | + | chr1.3:59368892-59368911 | MS.gene056096:intron | 25.0% |
| ! | AGAGAGAAATTATAATGAGT+GGG | + | chr1.3:59366143-59366162 | MS.gene056096:intron | 25.0% |
| ! | AGTACTCTAATTTGAATTGA+GGG | - | chr1.3:59367173-59367192 | None:intergenic | 25.0% |
| ! | AGTAGAAAAAGAAGAGAAAA+AGG | - | chr1.3:59368183-59368202 | None:intergenic | 25.0% |
| ! | ATAGTCTATTCTATCAACAA+TGG | - | chr1.3:59368104-59368123 | None:intergenic | 25.0% |
| ! | ATATGAGACTTAGTAATTGT+AGG | + | chr1.3:59365618-59365637 | MS.gene056096:intron | 25.0% |
| ! | ATGAAAATCCATATACTTAG+TGG | - | chr1.3:59367424-59367443 | None:intergenic | 25.0% |
| ! | ATTGAAAGATGAAGTCATAT+TGG | + | chr1.3:59364242-59364261 | MS.gene056096:intron | 25.0% |
| ! | ATTGTTTATTTGTGTTGCAA+AGG | + | chr1.3:59369078-59369097 | MS.gene056096:intron | 25.0% |
| ! | ATTTATAAATGCGGATGATT+GGG | + | chr1.3:59368893-59368912 | MS.gene056096:intron | 25.0% |
| ! | GATGGATCAATCTAATTATT+TGG | - | chr1.3:59364384-59364403 | None:intergenic | 25.0% |
| ! | GCTTCAAAACAATTGTATTT+AGG | + | chr1.3:59364435-59364454 | MS.gene056096:intron | 25.0% |
| ! | GGAAAAGAGATAAAAATGAT+AGG | - | chr1.3:59368779-59368798 | None:intergenic | 25.0% |
| ! | GGTGATAGAATTTATAAATG+CGG | + | chr1.3:59368884-59368903 | MS.gene056096:intron | 25.0% |
| ! | GTGAATAAGTAGGTAATAAA+CGG | - | chr1.3:59367629-59367648 | None:intergenic | 25.0% |
| ! | TAAAAAATAGCAGTTTGAGT+TGG | - | chr1.3:59369047-59369066 | None:intergenic | 25.0% |
| ! | TAAAAGTAAAGCAAAAGGAA+TGG | + | chr1.3:59365274-59365293 | MS.gene056096:intron | 25.0% |
| ! | TAAATATGAAGATGATGACT+TGG | + | chr1.3:59367506-59367525 | MS.gene056096:CDS | 25.0% |
| ! | TAAATCCAGAAAATGTAAAG+AGG | + | chr1.3:59368680-59368699 | MS.gene056096:intron | 25.0% |
| ! | TAAGTTCTCACTTACAATTA+AGG | + | chr1.3:59366728-59366747 | MS.gene056096:intron | 25.0% |
| ! | TAATCAAGTTAAAACCTTTG+TGG | + | chr1.3:59366031-59366050 | MS.gene056096:intron | 25.0% |
| ! | TACAAAAAGGAAATCACATT+TGG | + | chr1.3:59364204-59364223 | MS.gene056096:intron | 25.0% |
| ! | TAGGAAAAAAACACATGAAA+AGG | - | chr1.3:59368760-59368779 | None:intergenic | 25.0% |
| ! | TCATTATATCCATCTATTAC+TGG | - | chr1.3:59365433-59365452 | None:intergenic | 25.0% |
| ! | TTAACAAAGCACAAAACTAA+GGG | - | chr1.3:59366589-59366608 | None:intergenic | 25.0% |
| ! | TTACACACAATCTAAAAAGA+TGG | - | chr1.3:59364402-59364421 | None:intergenic | 25.0% |
| ! | TTTAACAAAGCACAAAACTA+AGG | - | chr1.3:59366590-59366609 | None:intergenic | 25.0% |
| ! | TTTATTACCTACTTATTCAC+CGG | + | chr1.3:59367629-59367648 | MS.gene056096:intron | 25.0% |
| !! | CTCTTCTTTTTCTACTATTT+TGG | + | chr1.3:59368187-59368206 | MS.gene056096:intron | 25.0% |
| !! | TAAAAATGGAGGTTTTTGTT+TGG | + | chr1.3:59368863-59368882 | MS.gene056096:intron | 25.0% |
| !!! | AAATATTTTTTGTTTCGCCA+TGG | + | chr1.3:59368582-59368601 | MS.gene056096:intron | 25.0% |
| !!! | TTCCTTTTGCTTTACTTTTA+CGG | - | chr1.3:59365274-59365293 | None:intergenic | 25.0% |
| AAAAGTAGTAGCAATTAGGA+AGG | - | chr1.3:59369020-59369039 | None:intergenic | 30.0% | |
| AATATGATCATTCCATGTAC+TGG | + | chr1.3:59367685-59367704 | MS.gene056096:intron | 30.0% | |
| AATTAGAATTGCCTTGGAAA+GGG | + | chr1.3:59365498-59365517 | MS.gene056096:intron | 30.0% | |
| AGACTATAACATTCAGAATG+TGG | + | chr1.3:59368117-59368136 | MS.gene056096:CDS | 30.0% | |
| AGAGAAATTATAATGAGTGG+GGG | + | chr1.3:59366145-59366164 | MS.gene056096:intron | 30.0% | |
| AGATTCTTCCAACAACATAT+GGG | - | chr1.3:59366829-59366848 | None:intergenic | 30.0% | |
| ATCAGCATGTACATTTAGTT+AGG | - | chr1.3:59365388-59365407 | None:intergenic | 30.0% | |
| ATGAAATTAAATGCAATCGG+TGG | + | chr1.3:59364595-59364614 | MS.gene056096:intron | 30.0% | |
| ATTCTGACAATATCTCCATT+GGG | + | chr1.3:59364866-59364885 | MS.gene056096:intron | 30.0% | |
| CAATTAATGCTCAAAACTTC+CGG | - | chr1.3:59367651-59367670 | None:intergenic | 30.0% | |
| CAGTACTCTAATTTGAATTG+AGG | - | chr1.3:59367174-59367193 | None:intergenic | 30.0% | |
| CTAAAATGTAACACACTTGA+AGG | - | chr1.3:59366410-59366429 | None:intergenic | 30.0% | |
| CTAAGGCAATAACTGAATTA+AGG | - | chr1.3:59364839-59364858 | None:intergenic | 30.0% | |
| GAGAGAAATTATAATGAGTG+GGG | + | chr1.3:59366144-59366163 | MS.gene056096:intron | 30.0% | |
| GGTTTAAATCCAATTACTGT+GGG | + | chr1.3:59365670-59365689 | MS.gene056096:CDS | 30.0% | |
| GTTAAATGTGTCATGAATGA+CGG | - | chr1.3:59367876-59367895 | None:intergenic | 30.0% | |
| GTTACATACCACTAAGTATA+TGG | + | chr1.3:59367413-59367432 | MS.gene056096:intron | 30.0% | |
| GTTGTTGGAAGAATCTATAA+TGG | + | chr1.3:59366833-59366852 | MS.gene056096:intron | 30.0% | |
| GTTTAAATCCAATTACTGTG+GGG | + | chr1.3:59365671-59365690 | MS.gene056096:CDS | 30.0% | |
| TACAGTTTCTGTGAATATAC+TGG | - | chr1.3:59364317-59364336 | None:intergenic | 30.0% | |
| TACCGTAAAAGTAAAGCAAA+AGG | + | chr1.3:59365269-59365288 | MS.gene056096:intron | 30.0% | |
| TAGATTCTTCCAACAACATA+TGG | - | chr1.3:59366830-59366849 | None:intergenic | 30.0% | |
| TAGGATATGAAATATCACCA+CGG | - | chr1.3:59368387-59368406 | None:intergenic | 30.0% | |
| TCAGCATGTACATTTAGTTA+GGG | - | chr1.3:59365387-59365406 | None:intergenic | 30.0% | |
| TGAAATTAAATGCAATCGGT+GGG | + | chr1.3:59364596-59364615 | MS.gene056096:intron | 30.0% | |
| TTCACTATTAGCTGATGATA+GGG | - | chr1.3:59367270-59367289 | None:intergenic | 30.0% | |
| TTCTTATTCTTCGAAACCAT+TGG | + | chr1.3:59365046-59365065 | MS.gene056096:intron | 30.0% | |
| TTTCTGTGAATATACTGGTA+TGG | - | chr1.3:59364312-59364331 | None:intergenic | 30.0% | |
| ! | AGAGGATGTCAATTTTCATA+AGG | - | chr1.3:59368069-59368088 | None:intergenic | 30.0% |
| ! | GAGGATGTCAATTTTCATAA+GGG | - | chr1.3:59368068-59368087 | None:intergenic | 30.0% |
| ! | GCAGATATGTGTTTTATATG+TGG | - | chr1.3:59366313-59366332 | None:intergenic | 30.0% |
| ! | TAGAAGAAAAAGAGCTTTAG+AGG | + | chr1.3:59368630-59368649 | MS.gene056096:intron | 30.0% |
| ! | TATCATGTGCTTTGTTATGT+TGG | + | chr1.3:59368328-59368347 | MS.gene056096:intron | 30.0% |
| ! | TCAATGCATCTCTGTATTTT+CGG | - | chr1.3:59363912-59363931 | None:intergenic | 30.0% |
| ! | TGAGCATTTTCTTATTCTGT+TGG | + | chr1.3:59366873-59366892 | MS.gene056096:intron | 30.0% |
| ! | TTTCATTTTACGATGATGCA+GGG | + | chr1.3:59367438-59367457 | MS.gene056096:intron | 30.0% |
| ! | TTTTCATTTTACGATGATGC+AGG | + | chr1.3:59367437-59367456 | MS.gene056096:intron | 30.0% |
| !! | AACTGACTTGATAAAGAGAT+CGG | + | chr1.3:59365858-59365877 | MS.gene056096:CDS | 30.0% |
| !! | ACACCAAATAATTTGTTCTG+AGG | + | chr1.3:59366283-59366302 | MS.gene056096:intron | 30.0% |
| !! | CACCAAATAATTTGTTCTGA+GGG | + | chr1.3:59366284-59366303 | MS.gene056096:intron | 30.0% |
| !! | CTCAATTGATTCACAGTTTT+TGG | + | chr1.3:59367909-59367928 | MS.gene056096:intron | 30.0% |
| !! | GTTGGTTCTGTTAATCATTA+AGG | + | chr1.3:59368346-59368365 | MS.gene056096:intron | 30.0% |
| !! | TACTTGGCATTTTGCTTTTA+AGG | + | chr1.3:59367304-59367323 | MS.gene056096:intron | 30.0% |
| !!! | AAGCTTCACTTTTTTAAGCT+TGG | - | chr1.3:59367799-59367818 | None:intergenic | 30.0% |
| !!! | CAATTTTTTTAGGGGTTTAC+TGG | + | chr1.3:59367055-59367074 | MS.gene056096:intron | 30.0% |
| !!! | TGGTGATGCATTTTAGTTTT+TGG | + | chr1.3:59365988-59366007 | MS.gene056096:intron | 30.0% |
| !!! | TTTTTGGTGTTTGCTTTTAC+AGG | + | chr1.3:59367925-59367944 | MS.gene056096:intron | 30.0% |
| AAAAAGAGATCCAACAGGTA+AGG | + | chr1.3:59367834-59367853 | MS.gene056096:intron | 35.0% | |
| AAAACTTCCGGTGAATAAGT+AGG | - | chr1.3:59367639-59367658 | None:intergenic | 35.0% | |
| AACAAGTGGTGAAGTATACT+TGG | + | chr1.3:59367288-59367307 | MS.gene056096:intron | 35.0% | |
| AAGAGAAAAAAGATCAGGAG+AGG | + | chr1.3:59364699-59364718 | MS.gene056096:intron | 35.0% | |
| AAGAGAAAAAGAGATCCAAC+AGG | + | chr1.3:59367829-59367848 | MS.gene056096:CDS | 35.0% | |
| AAGTAAAGCAAAAGGAATGG+AGG | + | chr1.3:59365277-59365296 | MS.gene056096:intron | 35.0% | |
| AATTGACATCCTCTATCTAC+AGG | + | chr1.3:59368075-59368094 | MS.gene056096:intron | 35.0% | |
| AGGATATGAAATATCACCAC+GGG | - | chr1.3:59368386-59368405 | None:intergenic | 35.0% | |
| AGGCAAAGAATGTTAAGTAC+AGG | - | chr1.3:59368717-59368736 | None:intergenic | 35.0% | |
| AGTAGGTAATAAACGGCATA+AGG | - | chr1.3:59367622-59367641 | None:intergenic | 35.0% | |
| ATATCATACCAGTGATACCA+TGG | - | chr1.3:59366086-59366105 | None:intergenic | 35.0% | |
| ATCAGCTAATAGTGAACAAG+TGG | + | chr1.3:59367274-59367293 | MS.gene056096:intron | 35.0% | |
| ATGGATTCTCCATTCAAAAG+TGG | + | chr1.3:59366237-59366256 | MS.gene056096:intron | 35.0% | |
| ATTAGAATTGCCTTGGAAAG+GGG | + | chr1.3:59365499-59365518 | MS.gene056096:intron | 35.0% | |
| ATTCTCCATTCAAAAGTGGA+AGG | + | chr1.3:59366241-59366260 | MS.gene056096:intron | 35.0% | |
| ATTGACATCCTCTATCTACA+GGG | + | chr1.3:59368076-59368095 | MS.gene056096:intron | 35.0% | |
| CACAATCATCCAGTAATAGA+TGG | + | chr1.3:59365421-59365440 | MS.gene056096:intron | 35.0% | |
| CTTATAAAGTGAACTTCGCA+AGG | + | chr1.3:59366441-59366460 | MS.gene056096:intron | 35.0% | |
| CTTCTCCGATTGCATTTAAA+GGG | - | chr1.3:59364670-59364689 | None:intergenic | 35.0% | |
| GAAAGATGAAGTCATATTGG+AGG | + | chr1.3:59364245-59364264 | MS.gene056096:intron | 35.0% | |
| GAATTAGAATTGCCTTGGAA+AGG | + | chr1.3:59365497-59365516 | MS.gene056096:intron | 35.0% | |
| GATATTTAACGAGCATCAGA+TGG | + | chr1.3:59367773-59367792 | MS.gene056096:intron | 35.0% | |
| GATTCTGACAATATCTCCAT+TGG | + | chr1.3:59364865-59364884 | MS.gene056096:intron | 35.0% | |
| GATTTGGATTGCATTGTTGA+CGG | + | chr1.3:59364498-59364517 | MS.gene056096:intron | 35.0% | |
| GGGTTTAAATCCAATTACTG+TGG | + | chr1.3:59365669-59365688 | MS.gene056096:CDS | 35.0% | |
| GTAACATGTCATTGTCAGTT+GGG | - | chr1.3:59365361-59365380 | None:intergenic | 35.0% | |
| GTCCCTCAGAACAAATTATT+TGG | - | chr1.3:59366289-59366308 | None:intergenic | 35.0% | |
| GTTCACTATTAGCTGATGAT+AGG | - | chr1.3:59367271-59367290 | None:intergenic | 35.0% | |
| TAATATTGGTCACGTCTCAT+TGG | + | chr1.3:59368414-59368433 | MS.gene056096:intron | 35.0% | |
| TACCAAGCAGCACTAAAAAT+AGG | - | chr1.3:59366355-59366374 | None:intergenic | 35.0% | |
| TACTTAACATTCTTTGCCTG+TGG | + | chr1.3:59368718-59368737 | MS.gene056096:intron | 35.0% | |
| TAGACTTTAAGTGGTTGAAG+TGG | + | chr1.3:59364934-59364953 | MS.gene056096:intron | 35.0% | |
| TCTTCTCCGATTGCATTTAA+AGG | - | chr1.3:59364671-59364690 | None:intergenic | 35.0% | |
| TGTAACATGTCATTGTCAGT+TGG | - | chr1.3:59365362-59365381 | None:intergenic | 35.0% | |
| TTAGAGACTCAATAGCATGT+TGG | - | chr1.3:59365828-59365847 | None:intergenic | 35.0% | |
| TTCAACCACTTAAAGTCTAC+AGG | - | chr1.3:59364933-59364952 | None:intergenic | 35.0% | |
| TTCACATGTATGCATGTTAC+AGG | + | chr1.3:59365593-59365612 | MS.gene056096:intron | 35.0% | |
| TTCCATTCATGTTAATCTCC+AGG | - | chr1.3:59367479-59367498 | None:intergenic | 35.0% | |
| TTTGGGAATTAGAATTGCCT+TGG | + | chr1.3:59365492-59365511 | MS.gene056096:intron | 35.0% | |
| ! | AGATGATGACTTGGACAATA+TGG | + | chr1.3:59367515-59367534 | MS.gene056096:CDS | 35.0% |
| ! | CATTTGTTCCTTGGCATTTT+TGG | + | chr1.3:59365206-59365225 | MS.gene056096:intron | 35.0% |
| ! | TCTCTGTCTCTTTTGCTTTA+TGG | + | chr1.3:59368226-59368245 | MS.gene056096:intron | 35.0% |
| ! | TGAAGGAAAGATTTTCCCAA+TGG | - | chr1.3:59364884-59364903 | None:intergenic | 35.0% |
| ! | TGCTACATTTTCAATCGTGA+TGG | - | chr1.3:59365148-59365167 | None:intergenic | 35.0% |
| ! | TGTCAATTTTCATAAGGGTG+TGG | - | chr1.3:59368063-59368082 | None:intergenic | 35.0% |
| ! | TTTTCAGTAGGATGAAAGAC+TGG | + | chr1.3:59365104-59365123 | MS.gene056096:intron | 35.0% |
| !! | AAATGATTTGGTAGCATCAG+TGG | - | chr1.3:59367746-59367765 | None:intergenic | 35.0% |
| !! | AACAAGTATCGAAGTTTCGA+AGG | - | chr1.3:59365532-59365551 | None:intergenic | 35.0% |
| !! | ACAAGTATCGAAGTTTCGAA+GGG | - | chr1.3:59365531-59365550 | None:intergenic | 35.0% |
| !! | AGAAAAAGAGCTTTAGAGGT+TGG | + | chr1.3:59368634-59368653 | MS.gene056096:intron | 35.0% |
| !! | TATTTTGTTTATGGGCATGC+AGG | + | chr1.3:59368253-59368272 | MS.gene056096:intron | 35.0% |
| !! | TGCAGAAATCAAGGCATTTT+TGG | - | chr1.3:59366806-59366825 | None:intergenic | 35.0% |
| !!! | ATCCTATTTTTAGTGCTGCT+TGG | + | chr1.3:59366350-59366369 | MS.gene056096:intron | 35.0% |
| !!! | CATATTTTAACAGGAGCTCA+TGG | - | chr1.3:59364578-59364597 | None:intergenic | 35.0% |
| !!! | GACTTGTCACTTTTTTTTCC+TGG | + | chr1.3:59367214-59367233 | MS.gene056096:intron | 35.0% |
| !!! | GTCACTTTTTTTTCCTGGTA+CGG | + | chr1.3:59367219-59367238 | MS.gene056096:intron | 35.0% |
| !!! | TATTTTTTGTTTCGCCATGG+AGG | + | chr1.3:59368585-59368604 | MS.gene056096:intron | 35.0% |
| !!! | TCACTTTTTTTTCCTGGTAC+GGG | + | chr1.3:59367220-59367239 | MS.gene056096:intron | 35.0% |
| AAAAATGGCAGAGTTGTCCA+AGG | + | chr1.3:59365756-59365775 | MS.gene056096:CDS | 40.0% | |
| AATGCCAAGGAACAAATGTG+TGG | - | chr1.3:59365204-59365223 | None:intergenic | 40.0% | |
| ACATATGGGTGCAGAAATCA+AGG | - | chr1.3:59366815-59366834 | None:intergenic | 40.0% | |
| AGAGAGCAAGGGAATAAGTA+AGG | - | chr1.3:59367361-59367380 | None:intergenic | 40.0% | |
| AGATTGAAGAGAACATGGAG+TGG | - | chr1.3:59366511-59366530 | None:intergenic | 40.0% | |
| ATCAGTACTAGTCATAGACC+AGG | + | chr1.3:59367991-59368010 | MS.gene056096:CDS | 40.0% | |
| ATTTCAGAAGTTGCACCTTC+TGG | + | chr1.3:59365171-59365190 | MS.gene056096:intron | 40.0% | |
| CAATGTCAGGAAAAATGTGC+AGG | + | chr1.3:59365927-59365946 | MS.gene056096:CDS | 40.0% | |
| CACTTCCTGTAGACTTTAAG+TGG | + | chr1.3:59364925-59364944 | MS.gene056096:intron | 40.0% | |
| CTGAGCTTAAGATCCAAGAA+CGG | + | chr1.3:59364960-59364979 | MS.gene056096:intron | 40.0% | |
| GAAATTATAATGAGTGGGGG+AGG | + | chr1.3:59366148-59366167 | MS.gene056096:intron | 40.0% | |
| GACCTGGAGATTAACATGAA+TGG | + | chr1.3:59367474-59367493 | MS.gene056096:CDS | 40.0% | |
| GAGGTGTGAAATCATCAATG+AGG | + | chr1.3:59364471-59364490 | MS.gene056096:intron | 40.0% | |
| GATTGAAGAGAACATGGAGT+GGG | - | chr1.3:59366510-59366529 | None:intergenic | 40.0% | |
| GCAGAGAGAACTCAGAAAAA+GGG | + | chr1.3:59368275-59368294 | MS.gene056096:CDS | 40.0% | |
| GTAATAACCTTGTCCGTTCT+TGG | - | chr1.3:59364976-59364995 | None:intergenic | 40.0% | |
| GTGAAATCATCAATGAGGAG+CGG | + | chr1.3:59364476-59364495 | MS.gene056096:intron | 40.0% | |
| TATTGAGTCTCTAACACACG+AGG | + | chr1.3:59365834-59365853 | MS.gene056096:CDS | 40.0% | |
| TCGATTGATGAAGAGACCAA+TGG | - | chr1.3:59365065-59365084 | None:intergenic | 40.0% | |
| TTAAGATCCAAGAACGGACA+AGG | + | chr1.3:59364966-59364985 | MS.gene056096:intron | 40.0% | |
| TTTCTGCACCCATATGTTGT+TGG | + | chr1.3:59366818-59366837 | MS.gene056096:intron | 40.0% | |
| ! | ACGGTATCAAATCTCCCTTT+TGG | - | chr1.3:59365255-59365274 | None:intergenic | 40.0% |
| ! | ACTGCCCTCTTTACATTTTC+TGG | - | chr1.3:59368688-59368707 | None:intergenic | 40.0% |
| ! | ATCTCTTGCATTGAGTTGCA+TGG | + | chr1.3:59366619-59366638 | MS.gene056096:intron | 40.0% |
| ! | CCATCTGCTGATTATACCAT+GGG | + | chr1.3:59364344-59364363 | MS.gene056096:intron | 40.0% |
| ! | CGGTATCAAATCTCCCTTTT+GGG | - | chr1.3:59365254-59365273 | None:intergenic | 40.0% |
| ! | CTGCACATTTTTCCTGACAT+TGG | - | chr1.3:59365929-59365948 | None:intergenic | 40.0% |
| ! | GGTATCAAATCTCCCTTTTG+GGG | - | chr1.3:59365253-59365272 | None:intergenic | 40.0% |
| ! | TCCATCTGCTGATTATACCA+TGG | + | chr1.3:59364343-59364362 | MS.gene056096:intron | 40.0% |
| ! | TCTTAGAGAACGTGGAGTTT+TGG | + | chr1.3:59368495-59368514 | MS.gene056096:intron | 40.0% |
| ! | TGCAACTTTTCCTTACCTGT+TGG | - | chr1.3:59367847-59367866 | None:intergenic | 40.0% |
| ! | TGGCCTTAAACAATTGCAGA+AGG | + | chr1.3:59368156-59368175 | MS.gene056096:CDS | 40.0% |
| ! | TTGCATTGAGTTGCATGGTT+GGG | + | chr1.3:59366624-59366643 | MS.gene056096:intron | 40.0% |
| ! | TTTTAACAGGAGCTCATGGT+GGG | - | chr1.3:59364574-59364593 | None:intergenic | 40.0% |
| !! | ATTTTAACAGGAGCTCATGG+TGG | - | chr1.3:59364575-59364594 | None:intergenic | 40.0% |
| !! | GGAAATTATTTTGTGACCCG+TGG | + | chr1.3:59368367-59368386 | MS.gene056096:intron | 40.0% |
| !! | TGTTTTTGCGGATGCAGTAA+GGG | + | chr1.3:59365649-59365668 | MS.gene056096:intron | 40.0% |
| !! | TTCGTCCTTCCACTTTTGAA+TGG | - | chr1.3:59366249-59366268 | None:intergenic | 40.0% |
| !!! | TTGTTTTTGCGGATGCAGTA+AGG | + | chr1.3:59365648-59365667 | MS.gene056096:intron | 40.0% |
| AAAGTGAACTTCGCAAGGAG+AGG | + | chr1.3:59366446-59366465 | MS.gene056096:intron | 45.0% | |
| AACTCAGAAAAAGGGAGGCA+TGG | + | chr1.3:59368283-59368302 | MS.gene056096:CDS | 45.0% | |
| AACTTCGCAAGGAGAGGATT+AGG | + | chr1.3:59366452-59366471 | MS.gene056096:intron | 45.0% | |
| AAGGAACAAATGTGTGGAGC+TGG | - | chr1.3:59365198-59365217 | None:intergenic | 45.0% | |
| AATCGACTACGTCCAGTACA+TGG | - | chr1.3:59367700-59367719 | None:intergenic | 45.0% | |
| ACCTTTGTGCTTCTCGTGAA+GGG | + | chr1.3:59367572-59367591 | MS.gene056096:intron | 45.0% | |
| ACTTCAACACCAAGTTCCAC+AGG | - | chr1.3:59368737-59368756 | None:intergenic | 45.0% | |
| AGCTCCACACATTTGTTCCT+TGG | + | chr1.3:59365197-59365216 | MS.gene056096:intron | 45.0% | |
| AGGAGAGAGAAAACTCCACA+TGG | + | chr1.3:59364755-59364774 | MS.gene056096:intron | 45.0% | |
| AGGGAAAAAACCCCTTTCCA+AGG | - | chr1.3:59365512-59365531 | None:intergenic | 45.0% | |
| AGTCACAGAAACTAGGACAG+AGG | - | chr1.3:59366537-59366556 | None:intergenic | 45.0% | |
| AGTTGTTATCTCCTCGCAGA+AGG | - | chr1.3:59368031-59368050 | None:intergenic | 45.0% | |
| AGTTTGTGATGAGCCCACAA+AGG | - | chr1.3:59366048-59366067 | None:intergenic | 45.0% | |
| ATCTCCAAACGACGGCATTA+AGG | - | chr1.3:59365794-59365813 | None:intergenic | 45.0% | |
| CAATGGTTCCCTGTAGATAG+AGG | - | chr1.3:59368087-59368106 | None:intergenic | 45.0% | |
| CATTCTTTGCCTGTGGAACT+TGG | + | chr1.3:59368725-59368744 | MS.gene056096:intron | 45.0% | |
| CCCATGGTATAATCAGCAGA+TGG | - | chr1.3:59364347-59364366 | None:intergenic | 45.0% | |
| CCCTAAATGCAATCGCTTGA+GGG | - | chr1.3:59368802-59368821 | None:intergenic | 45.0% | |
| CCCTCAAGCGATTGCATTTA+GGG | + | chr1.3:59368799-59368818 | MS.gene056096:intron | 45.0% | |
| CCTAAATGCAATCGCTTGAG+GGG | - | chr1.3:59368801-59368820 | None:intergenic | 45.0% | |
| CCTCAAGCGATTGCATTTAG+GGG | + | chr1.3:59368800-59368819 | MS.gene056096:intron | 45.0% | |
| CTAAACGAGTGACTCTACCA+TGG | + | chr1.3:59366066-59366085 | MS.gene056096:intron | 45.0% | |
| CTAAATGCAATCGCTTGAGG+GGG | - | chr1.3:59368800-59368819 | None:intergenic | 45.0% | |
| CTCAAGCGATTGCATTTAGG+GGG | + | chr1.3:59368801-59368820 | MS.gene056096:intron | 45.0% | |
| CTGACATTGGAATCCTCAGA+AGG | - | chr1.3:59365916-59365935 | None:intergenic | 45.0% | |
| CTTCAGATTCTTCCACACTC+CGG | + | chr1.3:59364899-59364918 | MS.gene056096:intron | 45.0% | |
| GACCAGTTTGATCCATGCTT+CGG | - | chr1.3:59365013-59365032 | None:intergenic | 45.0% | |
| GAGAGAACTCAGAAAAAGGG+AGG | + | chr1.3:59368278-59368297 | MS.gene056096:CDS | 45.0% | |
| GCAAGGAGAGGATTAGGAAA+AGG | + | chr1.3:59366458-59366477 | MS.gene056096:intron | 45.0% | |
| GGCAAGAGATGGTGTGTAAA+TGG | - | chr1.3:59368450-59368469 | None:intergenic | 45.0% | |
| GGCAGAGAGAACTCAGAAAA+AGG | + | chr1.3:59368274-59368293 | MS.gene056096:intron | 45.0% | |
| GGCTGCCCTTTAAATGCAAT+CGG | + | chr1.3:59364662-59364681 | MS.gene056096:intron | 45.0% | |
| GGTATAATCAGCAGATGGAG+AGG | - | chr1.3:59364342-59364361 | None:intergenic | 45.0% | |
| GGTGGAGATTGAAGAGAACA+TGG | - | chr1.3:59366516-59366535 | None:intergenic | 45.0% | |
| GTAGCTATAACCACTGCACA+TGG | + | chr1.3:59368519-59368538 | MS.gene056096:intron | 45.0% | |
| GTCAGAATCGCTGACAAAGT+TGG | - | chr1.3:59364809-59364828 | None:intergenic | 45.0% | |
| TACCTTTGTGCTTCTCGTGA+AGG | + | chr1.3:59367571-59367590 | MS.gene056096:intron | 45.0% | |
| TAGCAATTAGGAAGGCCGTT+AGG | - | chr1.3:59369012-59369031 | None:intergenic | 45.0% | |
| TATAACCACTGCACATGGCT+TGG | + | chr1.3:59368524-59368543 | MS.gene056096:intron | 45.0% | |
| TCAAGCGATTGCATTTAGGG+GGG | + | chr1.3:59368802-59368821 | MS.gene056096:intron | 45.0% | |
| TCCTTACCATCTCCAAACGA+CGG | - | chr1.3:59365802-59365821 | None:intergenic | 45.0% | |
| TCTGAGAGAGGATATGCAGA+AGG | - | chr1.3:59364540-59364559 | None:intergenic | 45.0% | |
| TCTTGCGAAGATCTACAGAG+AGG | - | chr1.3:59366936-59366955 | None:intergenic | 45.0% | |
| TGACTCTACCATGGTATCAC+TGG | + | chr1.3:59366075-59366094 | MS.gene056096:intron | 45.0% | |
| TTAATGCCGTCGTTTGGAGA+TGG | + | chr1.3:59365793-59365812 | MS.gene056096:CDS | 45.0% | |
| TTATAATGAGTGGGGGAGGT+CGG | + | chr1.3:59366152-59366171 | MS.gene056096:intron | 45.0% | |
| TTGTCAGAATCGCTGAGCTA+AGG | - | chr1.3:59364856-59364875 | None:intergenic | 45.0% | |
| TTTAACAGGAGCTCATGGTG+GGG | - | chr1.3:59364573-59364592 | None:intergenic | 45.0% | |
| TTTAGGCTACGTACGATGAG+AGG | + | chr1.3:59364452-59364471 | MS.gene056096:intron | 45.0% | |
| ! | AGACTGGTTGAAATCCGTGT+TGG | + | chr1.3:59365120-59365139 | MS.gene056096:intron | 45.0% |
| ! | CAACTTATTTGAAGCGCCTC+AGG | + | chr1.3:59366962-59366981 | MS.gene056096:CDS | 45.0% |
| ! | CGAGCTTGCTCAGATTATGA+AGG | + | chr1.3:59367964-59367983 | MS.gene056096:CDS | 45.0% |
| ! | CTTCTGAGGATTCCAATGTC+AGG | + | chr1.3:59365914-59365933 | MS.gene056096:CDS | 45.0% |
| ! | CTTGCATTGAGTTGCATGGT+TGG | + | chr1.3:59366623-59366642 | MS.gene056096:intron | 45.0% |
| ! | GACTGGTTGAAATCCGTGTT+GGG | + | chr1.3:59365121-59365140 | MS.gene056096:intron | 45.0% |
| ! | GTGCTGACCAATTCGATTAC+CGG | - | chr1.3:59363991-59364010 | None:intergenic | 45.0% |
| ! | TCATCAATGAGGAGCGGATT+TGG | + | chr1.3:59364482-59364501 | MS.gene056096:intron | 45.0% |
| ! | TGCATTGAGTTGCATGGTTG+GGG | + | chr1.3:59366625-59366644 | MS.gene056096:intron | 45.0% |
| ! | TTTAAGGCCATCCTCAACTG+TGG | - | chr1.3:59368146-59368165 | None:intergenic | 45.0% |
| !! | AAAGAGTACCTTGAACCACC+AGG | - | chr1.3:59364063-59364082 | None:intergenic | 45.0% |
| !! | CCTTGGCATTTTTGGAAGCA+GGG | + | chr1.3:59365214-59365233 | MS.gene056096:intron | 45.0% |
| !! | GGGTTGACTTGAATAGAAGC+AGG | - | chr1.3:59366569-59366588 | None:intergenic | 45.0% |
| !! | TCCTTGGCATTTTTGGAAGC+AGG | + | chr1.3:59365213-59365232 | MS.gene056096:intron | 45.0% |
| !! | TTTTTGTTTCGCCATGGAGG+AGG | + | chr1.3:59368588-59368607 | MS.gene056096:intron | 45.0% |
| !! | AAAAAAAATCATAATAAAAA+TGG | + | chr1.3:59368849-59368868 | MS.gene056096:intron | 5.0% |
| AAGCGGAGCATAAGAGCGAT+TGG | - | chr1.3:59364028-59364047 | None:intergenic | 50.0% | |
| AAGGCCTTAATGCCGTCGTT+TGG | + | chr1.3:59365787-59365806 | MS.gene056096:CDS | 50.0% | |
| ACGATGATGCAGGGTCAAGA+TGG | + | chr1.3:59367447-59367466 | MS.gene056096:intron | 50.0% | |
| AGAGATCGGAGAAGAGACTG+CGG | + | chr1.3:59365872-59365891 | MS.gene056096:CDS | 50.0% | |
| AGCGGAGCATAAGAGCGATT+GGG | - | chr1.3:59364027-59364046 | None:intergenic | 50.0% | |
| AGCTCAGTTGCATTCGCTAG+TGG | - | chr1.3:59364785-59364804 | None:intergenic | 50.0% | |
| ATGTTCGAGCAGGCAAGAGA+TGG | - | chr1.3:59368461-59368480 | None:intergenic | 50.0% | |
| CACAGAAACTAGGACAGAGG+TGG | - | chr1.3:59366534-59366553 | None:intergenic | 50.0% | |
| CACCGAAGCATGGATCAAAC+TGG | + | chr1.3:59365008-59365027 | MS.gene056096:intron | 50.0% | |
| CAGGCAGCAAAAAGAGGTGA+GGG | + | chr1.3:59366981-59367000 | MS.gene056096:intron | 50.0% | |
| CCAGGATCATCGGTACTAAG+CGG | - | chr1.3:59364045-59364064 | None:intergenic | 50.0% | |
| CCCCTAAATGCAATCGCTTG+AGG | - | chr1.3:59368803-59368822 | None:intergenic | 50.0% | |
| CCCCTCAAGCGATTGCATTT+AGG | + | chr1.3:59368798-59368817 | MS.gene056096:intron | 50.0% | |
| CCCTGCTTCCAAAAATGCCA+AGG | - | chr1.3:59365217-59365236 | None:intergenic | 50.0% | |
| CCTTGAACCACCAGGATCAT+CGG | - | chr1.3:59364055-59364074 | None:intergenic | 50.0% | |
| CCTTGCTCTCTGTCTCTTGT+CGG | + | chr1.3:59367370-59367389 | MS.gene056096:intron | 50.0% | |
| CCTTTGTGCTTCTCGTGAAG+GGG | + | chr1.3:59367573-59367592 | MS.gene056096:intron | 50.0% | |
| CGACAAGAGACAGAGAGCAA+GGG | - | chr1.3:59367372-59367391 | None:intergenic | 50.0% | |
| CGGAGTGTGGAAGAATCTGA+AGG | - | chr1.3:59364901-59364920 | None:intergenic | 50.0% | |
| CTAAAGCTCTCGCATGCACA+TGG | - | chr1.3:59364635-59364654 | None:intergenic | 50.0% | |
| CTGCTGTACTATGTTCGAGC+AGG | - | chr1.3:59368471-59368490 | None:intergenic | 50.0% | |
| CTTGCTCTCTGTCTCTTGTC+GGG | + | chr1.3:59367371-59367390 | MS.gene056096:intron | 50.0% | |
| CTTTGTGCTTCTCGTGAAGG+GGG | + | chr1.3:59367574-59367593 | MS.gene056096:intron | 50.0% | |
| GAATGTGGCAACCACAGTTG+AGG | + | chr1.3:59368132-59368151 | MS.gene056096:CDS | 50.0% | |
| GCAACGTGCACGCACAAAAA+TGG | + | chr1.3:59365741-59365760 | MS.gene056096:CDS | 50.0% | |
| GCAGACTGTCTTAGAGAACG+TGG | + | chr1.3:59368487-59368506 | MS.gene056096:intron | 50.0% | |
| GCAGCAAGAGAGTGAAGAGA+AGG | + | chr1.3:59364735-59364754 | MS.gene056096:intron | 50.0% | |
| GCGATTGGGATTAAGAAGCG+AGG | - | chr1.3:59364013-59364032 | None:intergenic | 50.0% | |
| GGAATGGTAGTCTAGTCCCA+TGG | - | chr1.3:59364363-59364382 | None:intergenic | 50.0% | |
| GGGAAAGAGATCTCGAGTCT+TGG | + | chr1.3:59367240-59367259 | MS.gene056096:intron | 50.0% | |
| TCAGATACATCCACCCATGC+TGG | - | chr1.3:59365703-59365722 | None:intergenic | 50.0% | |
| TCAGGCAGCAAAAAGAGGTG+AGG | + | chr1.3:59366980-59366999 | MS.gene056096:intron | 50.0% | |
| TGTGCAGTAGTGCCCCAAAA+GGG | + | chr1.3:59365238-59365257 | MS.gene056096:intron | 50.0% | |
| TTAACAGGAGCTCATGGTGG+GGG | - | chr1.3:59364572-59364591 | None:intergenic | 50.0% | |
| TTATCTCCTCGCAGAAGGAG+AGG | - | chr1.3:59368026-59368045 | None:intergenic | 50.0% | |
| ! | GATCTACAGAGAGGCTCTGA+AGG | - | chr1.3:59366927-59366946 | None:intergenic | 50.0% |
| ! | TCACCTCTTTTTGCTGCCTG+AGG | - | chr1.3:59366981-59367000 | None:intergenic | 50.0% |
| ! | TGATCCATGCTTCGGTGTGT+GGG | - | chr1.3:59365005-59365024 | None:intergenic | 50.0% |
| ! | TGCGAGAGCTTTAGTGCACT+AGG | + | chr1.3:59364641-59364660 | MS.gene056096:intron | 50.0% |
| ! | TTGATCCATGCTTCGGTGTG+TGG | - | chr1.3:59365006-59365025 | None:intergenic | 50.0% |
| !! | AAGTCTACAGGAAGTGCTGC+CGG | - | chr1.3:59364921-59364940 | None:intergenic | 50.0% |
| !! | CAATCGTGATGGACCCAACA+CGG | - | chr1.3:59365137-59365156 | None:intergenic | 50.0% |
| !! | CTTAGTACCGATGATCCTGG+TGG | + | chr1.3:59364045-59364064 | MS.gene056096:CDS | 50.0% |
| AAGGAGAGGATCTGCTGACC+TGG | - | chr1.3:59368012-59368031 | None:intergenic | 55.0% | |
| ATGTGTGGAGCTGGACCAGA+AGG | - | chr1.3:59365189-59365208 | None:intergenic | 55.0% | |
| CAGTTGCATTCGCTAGTGGC+AGG | - | chr1.3:59364781-59364800 | None:intergenic | 55.0% | |
| CATGCACATGGTCCGGGAAA+GGG | - | chr1.3:59364623-59364642 | None:intergenic | 55.0% | |
| CCGACAAGAGACAGAGAGCA+AGG | - | chr1.3:59367373-59367392 | None:intergenic | 55.0% | |
| CCGATGATCCTGGTGGTTCA+AGG | + | chr1.3:59364052-59364071 | MS.gene056096:CDS | 55.0% | |
| CGAGATCTCTTTCCCGTACC+AGG | - | chr1.3:59367235-59367254 | None:intergenic | 55.0% | |
| CGGTGGTCCGGTAATCGAAT+TGG | + | chr1.3:59363981-59364000 | MS.gene056096:CDS | 55.0% | |
| CTGTGCAGTAGTGCCCCAAA+AGG | + | chr1.3:59365237-59365256 | MS.gene056096:intron | 55.0% | |
| CTTGGCAACAGTGGCTTACG+AGG | + | chr1.3:59368542-59368561 | MS.gene056096:intron | 55.0% | |
| GATACATCCACCCATGCTGG+AGG | - | chr1.3:59365700-59365719 | None:intergenic | 55.0% | |
| GCCGTCGTTTGGAGATGGTA+AGG | + | chr1.3:59365798-59365817 | MS.gene056096:CDS | 55.0% | |
| GGGTCAAGATGGAGTTGACC+TGG | + | chr1.3:59367458-59367477 | MS.gene056096:intron | 55.0% | |
| GTGGCAACCACAGTTGAGGA+TGG | + | chr1.3:59368136-59368155 | MS.gene056096:CDS | 55.0% | |
| GTTGTCCAAGGCTCATGCGA+AGG | + | chr1.3:59365768-59365787 | MS.gene056096:CDS | 55.0% | |
| TAAGGCCTTCGCATGAGCCT+TGG | - | chr1.3:59365776-59365795 | None:intergenic | 55.0% | |
| TGTTGCCAAGCCATGTGCAG+TGG | - | chr1.3:59368532-59368551 | None:intergenic | 55.0% | |
| ! | CATGCTTCGGTGTGTGGGAA+CGG | - | chr1.3:59365000-59365019 | None:intergenic | 55.0% |
| ! | CCCCTTCACGAGAAGCACAA+AGG | - | chr1.3:59367576-59367595 | None:intergenic | 55.0% |
| ! | TGCACATGGCTTGGCAACAG+TGG | + | chr1.3:59368533-59368552 | MS.gene056096:intron | 55.0% |
| ! | TGCGGAGACTTGCTTCTGCA+GGG | + | chr1.3:59365890-59365909 | MS.gene056096:CDS | 55.0% |
| !! | CCGCTTAGTACCGATGATCC+TGG | + | chr1.3:59364042-59364061 | MS.gene056096:CDS | 55.0% |
| CAATCGGTGGGACCCTTTCC+CGG | + | chr1.3:59364608-59364627 | MS.gene056096:intron | 60.0% | |
| CGTTCCCACACACCGAAGCA+TGG | + | chr1.3:59364998-59365017 | MS.gene056096:intron | 60.0% | |
| CTCTCGCATGCACATGGTCC+GGG | - | chr1.3:59364629-59364648 | None:intergenic | 60.0% | |
| CTTCTCGTGAAGGGGGTGGT+GGG | + | chr1.3:59367581-59367600 | MS.gene056096:intron | 60.0% | |
| GCAGATCCTCTCCTTCTGCG+AGG | + | chr1.3:59368017-59368036 | MS.gene056096:intron | 60.0% | |
| GCATGCACATGGTCCGGGAA+AGG | - | chr1.3:59364624-59364643 | None:intergenic | 60.0% | |
| GCGAAGATGACGACGGAGCA+CGG | - | chr1.3:59363942-59363961 | None:intergenic | 60.0% | |
| GCGCCTCAGGCAGCAAAAAG+AGG | + | chr1.3:59366975-59366994 | MS.gene056096:CDS | 60.0% | |
| GCTCTCGCATGCACATGGTC+CGG | - | chr1.3:59364630-59364649 | None:intergenic | 60.0% | |
| GGAGGCAGCCCCACAGTAAT+TGG | - | chr1.3:59365682-59365701 | None:intergenic | 60.0% | |
| TGCTTCTGCAGGGCCTTCTG+AGG | + | chr1.3:59365900-59365919 | MS.gene056096:CDS | 60.0% | |
| TGTGCTTCTCGTGAAGGGGG+TGG | + | chr1.3:59367577-59367596 | MS.gene056096:intron | 60.0% | |
| TTCGCTAGTGGCAGGCCATG+TGG | - | chr1.3:59364773-59364792 | None:intergenic | 60.0% | |
| ! | CTGCGGAGACTTGCTTCTGC+AGG | + | chr1.3:59365889-59365908 | MS.gene056096:CDS | 60.0% |
| !! | GGGTTGCAGAGCTCTGAGAG+AGG | - | chr1.3:59364552-59364571 | None:intergenic | 60.0% |
| ACTCCGCGCTACCTCCTCCA+TGG | - | chr1.3:59368602-59368621 | None:intergenic | 65.0% | |
| CCACCGCGAGAGGAGGTAGA+CGG | - | chr1.3:59363967-59363986 | None:intergenic | 65.0% | |
| GACGGCGGCGAAGATGACGA+CGG | - | chr1.3:59363949-59363968 | None:intergenic | 65.0% | |
| GATTACCGGACCACCGCGAG+AGG | - | chr1.3:59363977-59363996 | None:intergenic | 65.0% | |
| GCTTCTCGTGAAGGGGGTGG+TGG | + | chr1.3:59367580-59367599 | MS.gene056096:intron | 65.0% | |
| TACCTCCTCTCGCGGTGGTC+CGG | + | chr1.3:59363969-59363988 | MS.gene056096:CDS | 65.0% | |
| TCGCCATGGAGGAGGTAGCG+CGG | + | chr1.3:59368596-59368615 | MS.gene056096:intron | 65.0% | |
| TGTGGGGCTGCCTCCAGCAT+GGG | + | chr1.3:59365687-59365706 | MS.gene056096:CDS | 65.0% | |
| !! | CAGGAAGTGCTGCCGGAGTG+TGG | - | chr1.3:59364914-59364933 | None:intergenic | 65.0% |
| CCGCCGTCTACCTCCTCTCG+CGG | + | chr1.3:59363961-59363980 | MS.gene056096:CDS | 70.0% | |
| CCGCGAGAGGAGGTAGACGG+CGG | - | chr1.3:59363964-59363983 | None:intergenic | 70.0% | |
| CCGTCTACCTCCTCTCGCGG+TGG | + | chr1.3:59363964-59363983 | MS.gene056096:CDS | 70.0% | |
| CTGTGGGGCTGCCTCCAGCA+TGG | + | chr1.3:59365686-59365705 | MS.gene056096:CDS | 70.0% | |
| TACCGGACCACCGCGAGAGG+AGG | - | chr1.3:59363974-59363993 | None:intergenic | 70.0% | |
| GGGGCTGCCTCCAGCATGGG+TGG | + | chr1.3:59365690-59365709 | MS.gene056096:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 59363880 | 59369141 | 59363880 | ID=MS.gene056096 |
| chr1.3 | mRNA | 59363880 | 59369141 | 59363880 | ID=MS.gene056096.t1;Parent=MS.gene056096 |
| chr1.3 | exon | 59363880 | 59364073 | 59363880 | ID=MS.gene056096.t1.exon1;Parent=MS.gene056096.t1 |
| chr1.3 | CDS | 59363880 | 59364073 | 59363880 | ID=cds.MS.gene056096.t1;Parent=MS.gene056096.t1 |
| chr1.3 | exon | 59365666 | 59365948 | 59365666 | ID=MS.gene056096.t1.exon2;Parent=MS.gene056096.t1 |
| chr1.3 | CDS | 59365666 | 59365948 | 59365666 | ID=cds.MS.gene056096.t1;Parent=MS.gene056096.t1 |
| chr1.3 | exon | 59366907 | 59366996 | 59366907 | ID=MS.gene056096.t1.exon3;Parent=MS.gene056096.t1 |
| chr1.3 | CDS | 59366907 | 59366996 | 59366907 | ID=cds.MS.gene056096.t1;Parent=MS.gene056096.t1 |
| chr1.3 | exon | 59367459 | 59367556 | 59367459 | ID=MS.gene056096.t1.exon4;Parent=MS.gene056096.t1 |
| chr1.3 | CDS | 59367459 | 59367556 | 59367459 | ID=cds.MS.gene056096.t1;Parent=MS.gene056096.t1 |
| chr1.3 | exon | 59367811 | 59367850 | 59367811 | ID=MS.gene056096.t1.exon5;Parent=MS.gene056096.t1 |
| chr1.3 | CDS | 59367811 | 59367850 | 59367811 | ID=cds.MS.gene056096.t1;Parent=MS.gene056096.t1 |
| chr1.3 | exon | 59367947 | 59368012 | 59367947 | ID=MS.gene056096.t1.exon6;Parent=MS.gene056096.t1 |
| chr1.3 | CDS | 59367947 | 59368012 | 59367947 | ID=cds.MS.gene056096.t1;Parent=MS.gene056096.t1 |
| chr1.3 | exon | 59368097 | 59368177 | 59368097 | ID=MS.gene056096.t1.exon7;Parent=MS.gene056096.t1 |
| chr1.3 | CDS | 59368097 | 59368177 | 59368097 | ID=cds.MS.gene056096.t1;Parent=MS.gene056096.t1 |
| chr1.3 | exon | 59368275 | 59368304 | 59368275 | ID=MS.gene056096.t1.exon8;Parent=MS.gene056096.t1 |
| chr1.3 | CDS | 59368275 | 59368304 | 59368275 | ID=cds.MS.gene056096.t1;Parent=MS.gene056096.t1 |
| chr1.3 | exon | 59369100 | 59369141 | 59369100 | ID=MS.gene056096.t1.exon9;Parent=MS.gene056096.t1 |
| chr1.3 | CDS | 59369100 | 59369141 | 59369100 | ID=cds.MS.gene056096.t1;Parent=MS.gene056096.t1 |
| Gene Sequence |
| Protein sequence |
