Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056094.t1 | XP_024638596.1 | 99.7 | 300 | 1 | 0 | 1 | 300 | 1 | 300 | 2.40E-155 | 558.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056094.t1 | Q9SUJ1 | 76.1 | 310 | 60 | 3 | 1 | 300 | 1 | 306 | 4.8e-120 | 432.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056094.t1 | G7I9F5 | 99.7 | 300 | 1 | 0 | 1 | 300 | 1 | 300 | 1.7e-155 | 558.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056094 | MS.gene056096 | 0.95889 | 7.65E-117 | -1.69E-46 |
| MS.gene056094 | MS.gene44168 | 0.972506 | 7.07E-135 | -1.69E-46 |
| MS.gene056094 | MS.gene44169 | 0.961736 | 4.76E-120 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene48256 | MS.gene056094 | PPI |
| MS.gene056094 | MS.gene02757 | PPI |
| MS.gene056094 | MS.gene003352 | PPI |
| MS.gene056094 | MS.gene22643 | PPI |
| MS.gene056094 | MS.gene48916 | PPI |
| MS.gene65117 | MS.gene056094 | PPI |
| MS.gene056094 | MS.gene22645 | PPI |
| MS.gene66057 | MS.gene056094 | PPI |
| MS.gene056094 | MS.gene45857 | PPI |
| MS.gene056094 | MS.gene02144 | PPI |
| MS.gene056094 | MS.gene062285 | PPI |
| MS.gene056094 | MS.gene02663 | PPI |
| MS.gene056094 | MS.gene78212 | PPI |
| MS.gene013657 | MS.gene056094 | PPI |
| MS.gene056094 | MS.gene90588 | PPI |
| MS.gene056094 | MS.gene81965 | PPI |
| MS.gene056094 | MS.gene017190 | PPI |
| MS.gene056094 | MS.gene059227 | PPI |
| MS.gene056094 | MS.gene77217 | PPI |
| MS.gene056094 | MS.gene052932 | PPI |
| MS.gene038424 | MS.gene056094 | PPI |
| MS.gene056094 | MS.gene82750 | PPI |
| MS.gene056094 | MS.gene065513 | PPI |
| MS.gene056094 | MS.gene50365 | PPI |
| MS.gene056094 | MS.gene027060 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056094.t1 | MTR_1g083790 | 99.667 | 300 | 1 | 0 | 1 | 300 | 1 | 300 | 0.0 | 613 |
| MS.gene056094.t1 | MTR_7g109165 | 70.068 | 294 | 83 | 4 | 1 | 291 | 1 | 292 | 9.67e-136 | 390 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056094.t1 | AT3G05710 | 76.129 | 310 | 60 | 3 | 1 | 300 | 1 | 306 | 1.03e-170 | 476 |
| MS.gene056094.t1 | AT3G05710 | 75.484 | 310 | 61 | 3 | 1 | 300 | 1 | 305 | 3.76e-168 | 469 |
| MS.gene056094.t1 | AT5G26980 | 78.477 | 302 | 58 | 5 | 1 | 300 | 1 | 297 | 3.92e-168 | 469 |
| MS.gene056094.t1 | AT5G26980 | 78.477 | 302 | 58 | 5 | 1 | 300 | 1 | 297 | 3.92e-168 | 469 |
| MS.gene056094.t1 | AT5G26980 | 78.477 | 302 | 58 | 5 | 1 | 300 | 1 | 297 | 3.92e-168 | 469 |
| MS.gene056094.t1 | AT4G02195 | 65.232 | 302 | 99 | 4 | 1 | 300 | 1 | 298 | 4.15e-138 | 393 |
Find 66 sgRNAs with CRISPR-Local
Find 319 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGACCTTCTGCAATTGTTTA+AGG | 0.154574 | 1.4:-67764573 | None:intergenic |
| GGAGGCAGCCCCACAGTAAT+TGG | 0.282740 | 1.4:-67762089 | None:intergenic |
| GGCAGAGAGAACTCAGAAAA+AGG | 0.288965 | 1.4:+67764688 | MS.gene056094:intron |
| ATCTCCAAACGACGGCATTA+AGG | 0.369271 | 1.4:-67762201 | None:intergenic |
| CTGCGGAGACTTGCTTCTGC+AGG | 0.409691 | 1.4:+67762299 | MS.gene056094:CDS |
| AGATGATGACTTGGACAATA+TGG | 0.409826 | 1.4:+67763928 | MS.gene056094:CDS |
| TACCTCCTCTCGCGGTGGTC+CGG | 0.424937 | 1.4:+67760378 | MS.gene056094:CDS |
| TTCCATTCATGTTAATCTCC+AGG | 0.430908 | 1.4:-67763889 | None:intergenic |
| TGTGGGGCTGCCTCCAGCAT+GGG | 0.434854 | 1.4:+67762097 | MS.gene056094:CDS |
| CAACTTATTTGAAGCGCCTC+AGG | 0.446869 | 1.4:+67763374 | MS.gene056094:CDS |
| GTGCTGACCAATTCGATTAC+CGG | 0.448177 | 1.4:-67760397 | None:intergenic |
| AAGGCCTTAATGCCGTCGTT+TGG | 0.451834 | 1.4:+67762197 | MS.gene056094:CDS |
| CGAGCTTGCTCAGATTATGA+AGG | 0.465210 | 1.4:+67764378 | MS.gene056094:CDS |
| TAAGGCCTTCGCATGAGCCT+TGG | 0.469990 | 1.4:-67762183 | None:intergenic |
| CCGATGATCCTGGTGGTTCA+AGG | 0.471361 | 1.4:+67760461 | MS.gene056094:CDS |
| GGGGCTGCCTCCAGCATGGG+TGG | 0.473862 | 1.4:+67762100 | MS.gene056094:CDS |
| GGTTTAAATCCAATTACTGT+GGG | 0.477788 | 1.4:+67762080 | MS.gene056094:CDS |
| CGGTGGTCCGGTAATCGAAT+TGG | 0.480133 | 1.4:+67760390 | MS.gene056094:CDS |
| TGCTTCTGCAGGGCCTTCTG+AGG | 0.500982 | 1.4:+67762310 | MS.gene056094:CDS |
| AAGCGGAGCATAAGAGCGAT+TGG | 0.501678 | 1.4:-67760434 | None:intergenic |
| CTGTGGGGCTGCCTCCAGCA+TGG | 0.507201 | 1.4:+67762096 | MS.gene056094:CDS |
| TCAGATACATCCACCCATGC+TGG | 0.509293 | 1.4:-67762110 | None:intergenic |
| TGCGGAGACTTGCTTCTGCA+GGG | 0.519709 | 1.4:+67762300 | MS.gene056094:CDS |
| GCGAAGATGACGACGGAGCA+CGG | 0.523089 | 1.4:-67760348 | None:intergenic |
| CCGCTTAGTACCGATGATCC+TGG | 0.524029 | 1.4:+67760451 | MS.gene056094:CDS |
| CTTCTGAGGATTCCAATGTC+AGG | 0.540775 | 1.4:+67762324 | MS.gene056094:CDS |
| GCCGTCGTTTGGAGATGGTA+AGG | 0.544395 | 1.4:+67762208 | MS.gene056094:CDS |
| AGCGGAGCATAAGAGCGATT+GGG | 0.546694 | 1.4:-67760433 | None:intergenic |
| TTAATGCCGTCGTTTGGAGA+TGG | 0.553207 | 1.4:+67762203 | MS.gene056094:CDS |
| AACTGACTTGATAAAGAGAT+CGG | 0.558407 | 1.4:+67762268 | MS.gene056094:CDS |
| GGGTCAAGATGGAGTTGACC+TGG | 0.559696 | 1.4:+67763871 | MS.gene056094:intron |
| GATCTACAGAGAGGCTCTGA+AGG | 0.565812 | 1.4:-67763336 | None:intergenic |
| CCTTGAACCACCAGGATCAT+CGG | 0.569373 | 1.4:-67760461 | None:intergenic |
| GACCTGGAGATTAACATGAA+TGG | 0.572532 | 1.4:+67763887 | MS.gene056094:CDS |
| ACGATGATGCAGGGTCAAGA+TGG | 0.577379 | 1.4:+67763860 | MS.gene056094:intron |
| GATATTTAACGAGCATCAGA+TGG | 0.584575 | 1.4:+67764186 | MS.gene056094:intron |
| TAAATATGAAGATGATGACT+TGG | 0.585064 | 1.4:+67763919 | MS.gene056094:CDS |
| GGGTTTAAATCCAATTACTG+TGG | 0.588018 | 1.4:+67762079 | MS.gene056094:CDS |
| ATAGTCTATTCTATCAACAA+TGG | 0.590977 | 1.4:-67764515 | None:intergenic |
| GTTGTCCAAGGCTCATGCGA+AGG | 0.595799 | 1.4:+67762178 | MS.gene056094:CDS |
| AGACTATAACATTCAGAATG+TGG | 0.601971 | 1.4:+67764531 | MS.gene056094:CDS |
| GAATGTGGCAACCACAGTTG+AGG | 0.603499 | 1.4:+67764546 | MS.gene056094:CDS |
| CTGACATTGGAATCCTCAGA+AGG | 0.605361 | 1.4:-67762323 | None:intergenic |
| GTGGCAACCACAGTTGAGGA+TGG | 0.612552 | 1.4:+67764550 | MS.gene056094:CDS |
| TACCGGACCACCGCGAGAGG+AGG | 0.619945 | 1.4:-67760380 | None:intergenic |
| CCACCGCGAGAGGAGGTAGA+CGG | 0.620622 | 1.4:-67760373 | None:intergenic |
| TTTAAGGCCATCCTCAACTG+TGG | 0.620825 | 1.4:-67764557 | None:intergenic |
| TGGCCTTAAACAATTGCAGA+AGG | 0.633448 | 1.4:+67764570 | MS.gene056094:CDS |
| AAAGAGTACCTTGAACCACC+AGG | 0.637073 | 1.4:-67760469 | None:intergenic |
| CCGTCTACCTCCTCTCGCGG+TGG | 0.646893 | 1.4:+67760373 | MS.gene056094:CDS |
| ATCAGTACTAGTCATAGACC+AGG | 0.646952 | 1.4:+67764405 | MS.gene056094:CDS |
| GATTACCGGACCACCGCGAG+AGG | 0.656759 | 1.4:-67760383 | None:intergenic |
| GATACATCCACCCATGCTGG+AGG | 0.661774 | 1.4:-67762107 | None:intergenic |
| CCGCCGTCTACCTCCTCTCG+CGG | 0.666831 | 1.4:+67760370 | MS.gene056094:CDS |
| TCGGAATCTGAATGGCGACG+AGG | 0.676673 | 1.4:+67760278 | None:intergenic |
| TTAGAGACTCAATAGCATGT+TGG | 0.680372 | 1.4:-67762235 | None:intergenic |
| AGAGATCGGAGAAGAGACTG+CGG | 0.681249 | 1.4:+67762282 | MS.gene056094:CDS |
| TCCTTACCATCTCCAAACGA+CGG | 0.691112 | 1.4:-67762209 | None:intergenic |
| CCAGGATCATCGGTACTAAG+CGG | 0.695962 | 1.4:-67760451 | None:intergenic |
| GTTTAAATCCAATTACTGTG+GGG | 0.707617 | 1.4:+67762081 | MS.gene056094:CDS |
| GCGATTGGGATTAAGAAGCG+AGG | 0.709817 | 1.4:-67760419 | None:intergenic |
| CTTAGTACCGATGATCCTGG+TGG | 0.710981 | 1.4:+67760454 | MS.gene056094:CDS |
| GACGGCGGCGAAGATGACGA+CGG | 0.733957 | 1.4:-67760355 | None:intergenic |
| CCGCGAGAGGAGGTAGACGG+CGG | 0.734166 | 1.4:-67760370 | None:intergenic |
| TCTTGCGAAGATCTACAGAG+AGG | 0.735622 | 1.4:-67763345 | None:intergenic |
| TATTGAGTCTCTAACACACG+AGG | 0.747213 | 1.4:+67762244 | MS.gene056094:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAAAATAAAATAACACA+CGG | - | chr1.4:67760583-67760602 | None:intergenic | 10.0% |
| !! | TATTAATAAATGAAAAATAG+TGG | - | chr1.4:67763432-67763451 | None:intergenic | 10.0% |
| !! | TCCAAATAATAAAATATAAA+AGG | + | chr1.4:67762594-67762613 | MS.gene056094:intron | 10.0% |
| !!! | AATAAAATTGCAATTTTTTT+AGG | + | chr1.4:67763457-67763476 | MS.gene056094:intron | 10.0% |
| !!! | ATAAAATTGCAATTTTTTTA+GGG | + | chr1.4:67763458-67763477 | MS.gene056094:intron | 10.0% |
| !!! | ATTTAATTTCATATTTTAAC+AGG | - | chr1.4:67760996-67761015 | None:intergenic | 10.0% |
| !!! | TATTTTATTCATCATTTTTT+GGG | + | chr1.4:67761885-67761904 | MS.gene056094:intron | 10.0% |
| !!! | TCCTTTTATATTTTATTATT+TGG | - | chr1.4:67762598-67762617 | None:intergenic | 10.0% |
| !!! | TTATTTTATTCATCATTTTT+TGG | + | chr1.4:67761884-67761903 | MS.gene056094:intron | 10.0% |
| !! | AAATTAAAATGATTCGAAAA+AGG | - | chr1.4:67763176-67763195 | None:intergenic | 15.0% |
| !! | AATATGAAATTAAATGCAAT+CGG | + | chr1.4:67761001-67761020 | MS.gene056094:intron | 15.0% |
| !! | AATGATTCATTAATACAAAA+AGG | + | chr1.4:67760600-67760619 | MS.gene056094:intron | 15.0% |
| !! | ATATCTAGATATAAATGATT+TGG | - | chr1.4:67764171-67764190 | None:intergenic | 15.0% |
| !! | TTTCACATAATACTTATAAA+TGG | + | chr1.4:67762378-67762397 | MS.gene056094:intron | 15.0% |
| !!! | ATGGTAATTATTTTGTTTAT+GGG | + | chr1.4:67764659-67764678 | MS.gene056094:intron | 15.0% |
| !!! | TAAAATTGCAATTTTTTTAG+GGG | + | chr1.4:67763459-67763478 | MS.gene056094:intron | 15.0% |
| !!! | TATGGTAATTATTTTGTTTA+TGG | + | chr1.4:67764658-67764677 | MS.gene056094:intron | 15.0% |
| !!! | TTTCGAATCATTTTAATTTA+TGG | + | chr1.4:67763177-67763196 | MS.gene056094:intron | 15.0% |
| !! | AAACACTAAAAAAAGAAACA+TGG | + | chr1.4:67762629-67762648 | MS.gene056094:intron | 20.0% |
| !! | AAATTAAGAGAAAAAAGATC+AGG | + | chr1.4:67761103-67761122 | MS.gene056094:intron | 20.0% |
| !! | AAATTTAGTTGACATTATTC+TGG | + | chr1.4:67762795-67762814 | MS.gene056094:intron | 20.0% |
| !! | AATCTATGTCAAAACAAAAA+TGG | + | chr1.4:67763114-67763133 | MS.gene056094:intron | 20.0% |
| !! | AGAATAATGTCAACTAAATT+TGG | - | chr1.4:67762796-67762815 | None:intergenic | 20.0% |
| !! | ATCAATCTAATTATTTGGAA+TGG | - | chr1.4:67760788-67760807 | None:intergenic | 20.0% |
| !! | TCGAGATCAAAATTAATAAT+AGG | + | chr1.4:67761490-67761509 | MS.gene056094:intron | 20.0% |
| !! | TTTAAGGAATATTATACTGA+AGG | + | chr1.4:67763733-67763752 | MS.gene056094:intron | 20.0% |
| !!! | ATTAATAATAGGTTTTCAGT+AGG | + | chr1.4:67761501-67761520 | MS.gene056094:intron | 20.0% |
| !!! | GTTTCTTTTTTTAGTGTTTA+TGG | - | chr1.4:67762628-67762647 | None:intergenic | 20.0% |
| !!! | TAGGATATTAATTGTTTTTG+CGG | + | chr1.4:67762047-67762066 | MS.gene056094:intron | 20.0% |
| ! | AAGAGAGAAATTATAATGAG+TGG | + | chr1.4:67762552-67762571 | MS.gene056094:intron | 25.0% |
| ! | AATAATAAGTCACAGAAACT+AGG | - | chr1.4:67762956-67762975 | None:intergenic | 25.0% |
| ! | AATCAAGTTAAAACCTTTGT+GGG | + | chr1.4:67762442-67762461 | MS.gene056094:intron | 25.0% |
| ! | AGAGAGAAATTATAATGAGT+GGG | + | chr1.4:67762553-67762572 | MS.gene056094:intron | 25.0% |
| ! | AGTACTCTAAATTTGAATTG+AGG | - | chr1.4:67763586-67763605 | None:intergenic | 25.0% |
| ! | AGTAGAAAAAGAAGAGAAAA+AGG | - | chr1.4:67764597-67764616 | None:intergenic | 25.0% |
| ! | ATAGTCTATTCTATCAACAA+TGG | - | chr1.4:67764518-67764537 | None:intergenic | 25.0% |
| ! | ATATGAGACTTAGTAATTGT+AGG | + | chr1.4:67762028-67762047 | MS.gene056094:intron | 25.0% |
| ! | ATGAAAATCCATATACTTAG+TGG | - | chr1.4:67763837-67763856 | None:intergenic | 25.0% |
| ! | ATTGAAAGATGAAGTCATAT+TGG | + | chr1.4:67760651-67760670 | MS.gene056094:intron | 25.0% |
| ! | GATGGATCAATCTAATTATT+TGG | - | chr1.4:67760793-67760812 | None:intergenic | 25.0% |
| ! | GCTTCAAAACAATTGTATTT+AGG | + | chr1.4:67760844-67760863 | MS.gene056094:intron | 25.0% |
| ! | GTACTCTAAATTTGAATTGA+GGG | - | chr1.4:67763585-67763604 | None:intergenic | 25.0% |
| ! | GTGAATAAGTAGGTAATAAA+CGG | - | chr1.4:67764042-67764061 | None:intergenic | 25.0% |
| ! | TAAAAGTAAAGCAAAAGGAA+TGG | + | chr1.4:67761683-67761702 | MS.gene056094:intron | 25.0% |
| ! | TAAATATGAAGATGATGACT+TGG | + | chr1.4:67763919-67763938 | MS.gene056094:CDS | 25.0% |
| ! | TAAGTTCTCACTTACAATTA+AGG | + | chr1.4:67763140-67763159 | MS.gene056094:intron | 25.0% |
| ! | TAATCAAGTTAAAACCTTTG+TGG | + | chr1.4:67762441-67762460 | MS.gene056094:intron | 25.0% |
| ! | TACAAAAAGGAAATCACATT+TGG | + | chr1.4:67760613-67760632 | MS.gene056094:intron | 25.0% |
| ! | TCATTATATCCATCTATTAC+TGG | - | chr1.4:67761843-67761862 | None:intergenic | 25.0% |
| ! | TTAACAAAGCACAAAACTAA+GGG | - | chr1.4:67763001-67763020 | None:intergenic | 25.0% |
| ! | TTACACACAATCTAAAAAGA+TGG | - | chr1.4:67760811-67760830 | None:intergenic | 25.0% |
| ! | TTTAACAAAGCACAAAACTA+AGG | - | chr1.4:67763002-67763021 | None:intergenic | 25.0% |
| ! | TTTATTACCTACTTATTCAC+CGG | + | chr1.4:67764042-67764061 | MS.gene056094:intron | 25.0% |
| !! | CTCTTCTTTTTCTACTATTT+TGG | + | chr1.4:67764601-67764620 | MS.gene056094:intron | 25.0% |
| !!! | TTCCTTTTGCTTTACTTTTA+CGG | - | chr1.4:67761683-67761702 | None:intergenic | 25.0% |
| AATATGATCATTCCATGTAC+TGG | + | chr1.4:67764098-67764117 | MS.gene056094:intron | 30.0% | |
| AATTAGAATTGCCTTGGAAA+GGG | + | chr1.4:67761908-67761927 | MS.gene056094:intron | 30.0% | |
| AGACTATAACATTCAGAATG+TGG | + | chr1.4:67764531-67764550 | MS.gene056094:CDS | 30.0% | |
| AGAGAAATTATAATGAGTGG+GGG | + | chr1.4:67762555-67762574 | MS.gene056094:intron | 30.0% | |
| AGATTCTTCCAACAACATAT+GGG | - | chr1.4:67763241-67763260 | None:intergenic | 30.0% | |
| ATCAGCATGTACATTTAGTT+AGG | - | chr1.4:67761797-67761816 | None:intergenic | 30.0% | |
| ATGAAATTAAATGCAATCGG+TGG | + | chr1.4:67761004-67761023 | MS.gene056094:intron | 30.0% | |
| ATTCTGACAATATCTCCATT+GGG | + | chr1.4:67761275-67761294 | MS.gene056094:intron | 30.0% | |
| CAATTAATGCTCAAAACTTC+CGG | - | chr1.4:67764064-67764083 | None:intergenic | 30.0% | |
| CTAAAATGTAACACACTTGA+AGG | - | chr1.4:67762821-67762840 | None:intergenic | 30.0% | |
| CTAAGGCAATAACTGAATTA+AGG | - | chr1.4:67761248-67761267 | None:intergenic | 30.0% | |
| GAGAGAAATTATAATGAGTG+GGG | + | chr1.4:67762554-67762573 | MS.gene056094:intron | 30.0% | |
| GGTTTAAATCCAATTACTGT+GGG | + | chr1.4:67762080-67762099 | MS.gene056094:CDS | 30.0% | |
| GTTACATACCACTAAGTATA+TGG | + | chr1.4:67763826-67763845 | MS.gene056094:intron | 30.0% | |
| GTTGTTGGAAGAATCTATAA+TGG | + | chr1.4:67763245-67763264 | MS.gene056094:intron | 30.0% | |
| GTTTAAATCCAATTACTGTG+GGG | + | chr1.4:67762081-67762100 | MS.gene056094:CDS | 30.0% | |
| TACAGTTTCTGTGAATATAC+TGG | - | chr1.4:67760726-67760745 | None:intergenic | 30.0% | |
| TACCGTAAAAGTAAAGCAAA+AGG | + | chr1.4:67761678-67761697 | MS.gene056094:intron | 30.0% | |
| TAGATTCTTCCAACAACATA+TGG | - | chr1.4:67763242-67763261 | None:intergenic | 30.0% | |
| TCAGCATGTACATTTAGTTA+GGG | - | chr1.4:67761796-67761815 | None:intergenic | 30.0% | |
| TGAAATTAAATGCAATCGGT+GGG | + | chr1.4:67761005-67761024 | MS.gene056094:intron | 30.0% | |
| TTCACTATTAGCTGATGATA+GGG | - | chr1.4:67763683-67763702 | None:intergenic | 30.0% | |
| TTCTTATTCTTCGAAACCAT+TGG | + | chr1.4:67761455-67761474 | MS.gene056094:intron | 30.0% | |
| TTTCTGTGAATATACTGGTA+TGG | - | chr1.4:67760721-67760740 | None:intergenic | 30.0% | |
| ! | AGAGGATGTCAATTTTCATA+AGG | - | chr1.4:67764483-67764502 | None:intergenic | 30.0% |
| ! | GAGGATGTCAATTTTCATAA+GGG | - | chr1.4:67764482-67764501 | None:intergenic | 30.0% |
| ! | GCAGATATGTGTTTTATATG+TGG | - | chr1.4:67762724-67762743 | None:intergenic | 30.0% |
| ! | TCAATGCATCTCTGTATTTT+CGG | - | chr1.4:67760321-67760340 | None:intergenic | 30.0% |
| ! | TGAGCATTTTCTTATTCTGT+TGG | + | chr1.4:67763285-67763304 | MS.gene056094:intron | 30.0% |
| ! | TTTCATTTTACGATGATGCA+GGG | + | chr1.4:67763851-67763870 | MS.gene056094:intron | 30.0% |
| ! | TTTTCATTTTACGATGATGC+AGG | + | chr1.4:67763850-67763869 | MS.gene056094:intron | 30.0% |
| !! | AACTGACTTGATAAAGAGAT+CGG | + | chr1.4:67762268-67762287 | MS.gene056094:CDS | 30.0% |
| !! | ACACCAAATAATTTGTTCTG+AGG | + | chr1.4:67762694-67762713 | MS.gene056094:intron | 30.0% |
| !! | CACCAAATAATTTGTTCTGA+GGG | + | chr1.4:67762695-67762714 | MS.gene056094:intron | 30.0% |
| !! | CTCAATTGATTCACAGTTTT+TGG | + | chr1.4:67764323-67764342 | MS.gene056094:intron | 30.0% |
| !! | TACTTGGCATTTTGCTTTTA+AGG | + | chr1.4:67763717-67763736 | MS.gene056094:intron | 30.0% |
| !!! | AGCTTCACTTTTTTTAAGCT+TGG | - | chr1.4:67764212-67764231 | None:intergenic | 30.0% |
| !!! | TGGTGATGCATTTTAGTTTT+TGG | + | chr1.4:67762398-67762417 | MS.gene056094:intron | 30.0% |
| !!! | TTTTTGGTGTTTGCTTTTAC+AGG | + | chr1.4:67764339-67764358 | MS.gene056094:intron | 30.0% |
| AAAAAGAGATCCAACAGGTA+AGG | + | chr1.4:67764248-67764267 | MS.gene056094:intron | 35.0% | |
| AAAACTTCCGGTGAATAAGT+AGG | - | chr1.4:67764052-67764071 | None:intergenic | 35.0% | |
| AACAAGTGGTGAAGTATACT+TGG | + | chr1.4:67763701-67763720 | MS.gene056094:intron | 35.0% | |
| AAGAGAAAAAAGATCAGGAG+AGG | + | chr1.4:67761108-67761127 | MS.gene056094:intron | 35.0% | |
| AAGAGAAAAAGAGATCCAAC+AGG | + | chr1.4:67764243-67764262 | MS.gene056094:CDS | 35.0% | |
| AAGTAAAGCAAAAGGAATGG+AGG | + | chr1.4:67761686-67761705 | MS.gene056094:intron | 35.0% | |
| AATTGACATCCTCTATCTAC+AGG | + | chr1.4:67764489-67764508 | MS.gene056094:intron | 35.0% | |
| AGTAGGTAATAAACGGCATA+AGG | - | chr1.4:67764035-67764054 | None:intergenic | 35.0% | |
| ATATCATACCAGTGATACCA+TGG | - | chr1.4:67762496-67762515 | None:intergenic | 35.0% | |
| ATCAGCTAATAGTGAACAAG+TGG | + | chr1.4:67763687-67763706 | MS.gene056094:intron | 35.0% | |
| ATGGATTCTCCATTCAAAAG+TGG | + | chr1.4:67762648-67762667 | MS.gene056094:intron | 35.0% | |
| ATTAGAATTGCCTTGGAAAG+GGG | + | chr1.4:67761909-67761928 | MS.gene056094:intron | 35.0% | |
| ATTCTCCATTCAAAAGTGGA+AGG | + | chr1.4:67762652-67762671 | MS.gene056094:intron | 35.0% | |
| ATTGACATCCTCTATCTACA+GGG | + | chr1.4:67764490-67764509 | MS.gene056094:intron | 35.0% | |
| CACAATCATCCAGTAATAGA+TGG | + | chr1.4:67761831-67761850 | MS.gene056094:intron | 35.0% | |
| CTTATAAAGTGAACTTCGCA+AGG | + | chr1.4:67762852-67762871 | MS.gene056094:intron | 35.0% | |
| CTTCTCCGATTGCATTTAAA+GGG | - | chr1.4:67761079-67761098 | None:intergenic | 35.0% | |
| GAAAGATGAAGTCATATTGG+AGG | + | chr1.4:67760654-67760673 | MS.gene056094:intron | 35.0% | |
| GAATTAGAATTGCCTTGGAA+AGG | + | chr1.4:67761907-67761926 | MS.gene056094:intron | 35.0% | |
| GATATTTAACGAGCATCAGA+TGG | + | chr1.4:67764186-67764205 | MS.gene056094:intron | 35.0% | |
| GATTCTGACAATATCTCCAT+TGG | + | chr1.4:67761274-67761293 | MS.gene056094:intron | 35.0% | |
| GATTTGGATTGCATTGTTGA+CGG | + | chr1.4:67760907-67760926 | MS.gene056094:intron | 35.0% | |
| GGGTTTAAATCCAATTACTG+TGG | + | chr1.4:67762079-67762098 | MS.gene056094:CDS | 35.0% | |
| GTAACATGTCATTGTCAGTT+GGG | - | chr1.4:67761770-67761789 | None:intergenic | 35.0% | |
| GTCCCTCAGAACAAATTATT+TGG | - | chr1.4:67762700-67762719 | None:intergenic | 35.0% | |
| GTTCACTATTAGCTGATGAT+AGG | - | chr1.4:67763684-67763703 | None:intergenic | 35.0% | |
| TACCAAGCAGCACTAAAAAT+AGG | - | chr1.4:67762766-67762785 | None:intergenic | 35.0% | |
| TAGACTTTAAGTGGTTGAAG+TGG | + | chr1.4:67761343-67761362 | MS.gene056094:intron | 35.0% | |
| TCTTCTCCGATTGCATTTAA+AGG | - | chr1.4:67761080-67761099 | None:intergenic | 35.0% | |
| TGTAACATGTCATTGTCAGT+TGG | - | chr1.4:67761771-67761790 | None:intergenic | 35.0% | |
| TTAGAGACTCAATAGCATGT+TGG | - | chr1.4:67762238-67762257 | None:intergenic | 35.0% | |
| TTCAACCACTTAAAGTCTAC+AGG | - | chr1.4:67761342-67761361 | None:intergenic | 35.0% | |
| TTCACATGTATGCATGTTAC+AGG | + | chr1.4:67762003-67762022 | MS.gene056094:intron | 35.0% | |
| TTCCATTCATGTTAATCTCC+AGG | - | chr1.4:67763892-67763911 | None:intergenic | 35.0% | |
| TTTGGGAATTAGAATTGCCT+TGG | + | chr1.4:67761902-67761921 | MS.gene056094:intron | 35.0% | |
| ! | AGATGATGACTTGGACAATA+TGG | + | chr1.4:67763928-67763947 | MS.gene056094:CDS | 35.0% |
| ! | CATTTGTTCCTTGGCATTTT+TGG | + | chr1.4:67761615-67761634 | MS.gene056094:intron | 35.0% |
| ! | TCTCTGTCTCTTTTGCTTTA+TGG | + | chr1.4:67764640-67764659 | MS.gene056094:intron | 35.0% |
| ! | TGAAGGAAAGATTTTCCCAA+TGG | - | chr1.4:67761293-67761312 | None:intergenic | 35.0% |
| ! | TGCTACATTTTCAATCGTGA+TGG | - | chr1.4:67761557-67761576 | None:intergenic | 35.0% |
| ! | TGTCAATTTTCATAAGGGTG+TGG | - | chr1.4:67764477-67764496 | None:intergenic | 35.0% |
| ! | TTTTCAGTAGGATGAAAGAC+TGG | + | chr1.4:67761513-67761532 | MS.gene056094:intron | 35.0% |
| !! | AAATGATTTGGTAGCATCAG+TGG | - | chr1.4:67764159-67764178 | None:intergenic | 35.0% |
| !! | AACAAGTATCGAAGTTTCGA+AGG | - | chr1.4:67761942-67761961 | None:intergenic | 35.0% |
| !! | ACAAGTATCGAAGTTTCGAA+GGG | - | chr1.4:67761941-67761960 | None:intergenic | 35.0% |
| !! | TATTTTGTTTATGGGCATGC+AGG | + | chr1.4:67764667-67764686 | MS.gene056094:intron | 35.0% |
| !! | TGCAGAAATCAAGGCATTTT+TGG | - | chr1.4:67763218-67763237 | None:intergenic | 35.0% |
| !!! | ATCCTATTTTTAGTGCTGCT+TGG | + | chr1.4:67762761-67762780 | MS.gene056094:intron | 35.0% |
| !!! | CATATTTTAACAGGAGCTCA+TGG | - | chr1.4:67760987-67761006 | None:intergenic | 35.0% |
| !!! | GACTTGTCACTTTTTTTTCC+TGG | + | chr1.4:67763627-67763646 | MS.gene056094:intron | 35.0% |
| !!! | GCAATTTTTTTAGGGGTTAC+TGG | + | chr1.4:67763466-67763485 | MS.gene056094:intron | 35.0% |
| !!! | GTCACTTTTTTTTCCTGGTA+CGG | + | chr1.4:67763632-67763651 | MS.gene056094:intron | 35.0% |
| !!! | TCACTTTTTTTTCCTGGTAC+GGG | + | chr1.4:67763633-67763652 | MS.gene056094:intron | 35.0% |
| AAAAATGGCAGAGTTGTCCA+AGG | + | chr1.4:67762166-67762185 | MS.gene056094:CDS | 40.0% | |
| AATGCCAAGGAACAAATGTG+TGG | - | chr1.4:67761613-67761632 | None:intergenic | 40.0% | |
| ACATATGGGTGCAGAAATCA+AGG | - | chr1.4:67763227-67763246 | None:intergenic | 40.0% | |
| AGAGAGCAAGGGAATAAGTA+AGG | - | chr1.4:67763774-67763793 | None:intergenic | 40.0% | |
| AGATTGAAGAGAACATGGAG+TGG | - | chr1.4:67762923-67762942 | None:intergenic | 40.0% | |
| ATCAGTACTAGTCATAGACC+AGG | + | chr1.4:67764405-67764424 | MS.gene056094:CDS | 40.0% | |
| ATTTCAGAAGTTGCACCTTC+TGG | + | chr1.4:67761580-67761599 | MS.gene056094:intron | 40.0% | |
| CAATGTCAGGAAAAATGTGC+AGG | + | chr1.4:67762337-67762356 | MS.gene056094:CDS | 40.0% | |
| CACTTCCTGTAGACTTTAAG+TGG | + | chr1.4:67761334-67761353 | MS.gene056094:intron | 40.0% | |
| CTGAGCTTAAGATCCAAGAA+CGG | + | chr1.4:67761369-67761388 | MS.gene056094:intron | 40.0% | |
| GAAATTATAATGAGTGGGGG+AGG | + | chr1.4:67762558-67762577 | MS.gene056094:intron | 40.0% | |
| GACCTGGAGATTAACATGAA+TGG | + | chr1.4:67763887-67763906 | MS.gene056094:CDS | 40.0% | |
| GAGGTGTGAAATCATCAATG+AGG | + | chr1.4:67760880-67760899 | MS.gene056094:intron | 40.0% | |
| GATTGAAGAGAACATGGAGT+GGG | - | chr1.4:67762922-67762941 | None:intergenic | 40.0% | |
| GCAGAGAGAACTCAGAAAAA+GGG | + | chr1.4:67764689-67764708 | MS.gene056094:CDS | 40.0% | |
| GGACCTTCTGCAATTGTTTA+AGG | - | chr1.4:67764576-67764595 | None:intergenic | 40.0% | |
| GTAATAACCTTGTCCGTTCT+TGG | - | chr1.4:67761385-67761404 | None:intergenic | 40.0% | |
| GTGAAATCATCAATGAGGAG+CGG | + | chr1.4:67760885-67760904 | MS.gene056094:intron | 40.0% | |
| TATTGAGTCTCTAACACACG+AGG | + | chr1.4:67762244-67762263 | MS.gene056094:CDS | 40.0% | |
| TCGATTGATGAAGAGACCAA+TGG | - | chr1.4:67761474-67761493 | None:intergenic | 40.0% | |
| TTAAGATCCAAGAACGGACA+AGG | + | chr1.4:67761375-67761394 | MS.gene056094:intron | 40.0% | |
| TTTCTGCACCCATATGTTGT+TGG | + | chr1.4:67763230-67763249 | MS.gene056094:intron | 40.0% | |
| ! | ACGGTATCAAATCTCCCTTT+TGG | - | chr1.4:67761664-67761683 | None:intergenic | 40.0% |
| ! | ATCTCTTGCATTGAGTTGCA+TGG | + | chr1.4:67763031-67763050 | MS.gene056094:intron | 40.0% |
| ! | CCATCTGCTGATTATACCAT+GGG | + | chr1.4:67760753-67760772 | MS.gene056094:intron | 40.0% |
| ! | CGGTATCAAATCTCCCTTTT+GGG | - | chr1.4:67761663-67761682 | None:intergenic | 40.0% |
| ! | CTGCACATTTTTCCTGACAT+TGG | - | chr1.4:67762339-67762358 | None:intergenic | 40.0% |
| ! | GGTATCAAATCTCCCTTTTG+GGG | - | chr1.4:67761662-67761681 | None:intergenic | 40.0% |
| ! | TCCATCTGCTGATTATACCA+TGG | + | chr1.4:67760752-67760771 | MS.gene056094:intron | 40.0% |
| ! | TGCAACTTTTCCTTACCTGT+TGG | - | chr1.4:67764261-67764280 | None:intergenic | 40.0% |
| ! | TGGCCTTAAACAATTGCAGA+AGG | + | chr1.4:67764570-67764589 | MS.gene056094:CDS | 40.0% |
| ! | TTGCATTGAGTTGCATGGTT+GGG | + | chr1.4:67763036-67763055 | MS.gene056094:intron | 40.0% |
| ! | TTTTAACAGGAGCTCATGGT+GGG | - | chr1.4:67760983-67761002 | None:intergenic | 40.0% |
| !! | ATTTTAACAGGAGCTCATGG+TGG | - | chr1.4:67760984-67761003 | None:intergenic | 40.0% |
| !! | TGTTTTTGCGGATGCAGTAA+GGG | + | chr1.4:67762059-67762078 | MS.gene056094:intron | 40.0% |
| !! | TTCGTCCTTCCACTTTTGAA+TGG | - | chr1.4:67762660-67762679 | None:intergenic | 40.0% |
| !!! | TTGTTTTTGCGGATGCAGTA+AGG | + | chr1.4:67762058-67762077 | MS.gene056094:intron | 40.0% |
| AAAGTGAACTTCGCAAGGAG+AGG | + | chr1.4:67762857-67762876 | MS.gene056094:intron | 45.0% | |
| AACTCAGAAAAAGGGAGGCA+TGG | + | chr1.4:67764697-67764716 | MS.gene056094:CDS | 45.0% | |
| AACTTCGCAAGGAGAGGATT+AGG | + | chr1.4:67762863-67762882 | MS.gene056094:intron | 45.0% | |
| AAGGAACAAATGTGTGGAGC+TGG | - | chr1.4:67761607-67761626 | None:intergenic | 45.0% | |
| AATCGACTACGTCCAGTACA+TGG | - | chr1.4:67764113-67764132 | None:intergenic | 45.0% | |
| ACCTTTGTGCTTCTCGTGAA+GGG | + | chr1.4:67763985-67764004 | MS.gene056094:intron | 45.0% | |
| AGCTCCACACATTTGTTCCT+TGG | + | chr1.4:67761606-67761625 | MS.gene056094:intron | 45.0% | |
| AGGAGAGAGAAAACTCCACA+TGG | + | chr1.4:67761164-67761183 | MS.gene056094:intron | 45.0% | |
| AGGGAAAAAACCCCTTTCCA+AGG | - | chr1.4:67761922-67761941 | None:intergenic | 45.0% | |
| AGTCACAGAAACTAGGACAG+AGG | - | chr1.4:67762949-67762968 | None:intergenic | 45.0% | |
| AGTTGTTATCTCCTCGCAGA+AGG | - | chr1.4:67764445-67764464 | None:intergenic | 45.0% | |
| AGTTTGTGATGAGCCCACAA+AGG | - | chr1.4:67762458-67762477 | None:intergenic | 45.0% | |
| ATCTCCAAACGACGGCATTA+AGG | - | chr1.4:67762204-67762223 | None:intergenic | 45.0% | |
| CAATGGTTCCCTGTAGATAG+AGG | - | chr1.4:67764501-67764520 | None:intergenic | 45.0% | |
| CCCATGGTATAATCAGCAGA+TGG | - | chr1.4:67760756-67760775 | None:intergenic | 45.0% | |
| CTAAACGAGTGACTCTACCA+TGG | + | chr1.4:67762476-67762495 | MS.gene056094:intron | 45.0% | |
| CTGACATTGGAATCCTCAGA+AGG | - | chr1.4:67762326-67762345 | None:intergenic | 45.0% | |
| CTTCAGATTCTTCCACACTC+CGG | + | chr1.4:67761308-67761327 | MS.gene056094:intron | 45.0% | |
| GACCAGTTTGATCCATGCTT+CGG | - | chr1.4:67761422-67761441 | None:intergenic | 45.0% | |
| GAGAGAACTCAGAAAAAGGG+AGG | + | chr1.4:67764692-67764711 | MS.gene056094:CDS | 45.0% | |
| GCAAGGAGAGGATTAGGAAA+AGG | + | chr1.4:67762869-67762888 | MS.gene056094:intron | 45.0% | |
| GGCAGAGAGAACTCAGAAAA+AGG | + | chr1.4:67764688-67764707 | MS.gene056094:intron | 45.0% | |
| GGCTGCCCTTTAAATGCAAT+CGG | + | chr1.4:67761071-67761090 | MS.gene056094:intron | 45.0% | |
| GGTATAATCAGCAGATGGAG+AGG | - | chr1.4:67760751-67760770 | None:intergenic | 45.0% | |
| GGTGGAGATTGAAGAGAACA+TGG | - | chr1.4:67762928-67762947 | None:intergenic | 45.0% | |
| GTCAGAATCGCTGACAAAGT+TGG | - | chr1.4:67761218-67761237 | None:intergenic | 45.0% | |
| TACCTTTGTGCTTCTCGTGA+AGG | + | chr1.4:67763984-67764003 | MS.gene056094:intron | 45.0% | |
| TCCTTACCATCTCCAAACGA+CGG | - | chr1.4:67762212-67762231 | None:intergenic | 45.0% | |
| TCTGAGAGAGGATATGCAGA+AGG | - | chr1.4:67760949-67760968 | None:intergenic | 45.0% | |
| TCTTGCGAAGATCTACAGAG+AGG | - | chr1.4:67763348-67763367 | None:intergenic | 45.0% | |
| TGACTCTACCATGGTATCAC+TGG | + | chr1.4:67762485-67762504 | MS.gene056094:intron | 45.0% | |
| TTAATGCCGTCGTTTGGAGA+TGG | + | chr1.4:67762203-67762222 | MS.gene056094:CDS | 45.0% | |
| TTATAATGAGTGGGGGAGGT+CGG | + | chr1.4:67762562-67762581 | MS.gene056094:intron | 45.0% | |
| TTGTCAGAATCGCTGAGCTA+AGG | - | chr1.4:67761265-67761284 | None:intergenic | 45.0% | |
| TTTAACAGGAGCTCATGGTG+GGG | - | chr1.4:67760982-67761001 | None:intergenic | 45.0% | |
| TTTAGGCTACGTACGATGAG+AGG | + | chr1.4:67760861-67760880 | MS.gene056094:intron | 45.0% | |
| ! | AGACTGGTTGAAATCCGTGT+TGG | + | chr1.4:67761529-67761548 | MS.gene056094:intron | 45.0% |
| ! | CAACTTATTTGAAGCGCCTC+AGG | + | chr1.4:67763374-67763393 | MS.gene056094:CDS | 45.0% |
| ! | CGAGCTTGCTCAGATTATGA+AGG | + | chr1.4:67764378-67764397 | MS.gene056094:CDS | 45.0% |
| ! | CTTCTGAGGATTCCAATGTC+AGG | + | chr1.4:67762324-67762343 | MS.gene056094:CDS | 45.0% |
| ! | CTTGCATTGAGTTGCATGGT+TGG | + | chr1.4:67763035-67763054 | MS.gene056094:intron | 45.0% |
| ! | GACTGGTTGAAATCCGTGTT+GGG | + | chr1.4:67761530-67761549 | MS.gene056094:intron | 45.0% |
| ! | GTGCTGACCAATTCGATTAC+CGG | - | chr1.4:67760400-67760419 | None:intergenic | 45.0% |
| ! | TCATCAATGAGGAGCGGATT+TGG | + | chr1.4:67760891-67760910 | MS.gene056094:intron | 45.0% |
| ! | TGCATTGAGTTGCATGGTTG+GGG | + | chr1.4:67763037-67763056 | MS.gene056094:intron | 45.0% |
| ! | TTTAAGGCCATCCTCAACTG+TGG | - | chr1.4:67764560-67764579 | None:intergenic | 45.0% |
| !! | AAAGAGTACCTTGAACCACC+AGG | - | chr1.4:67760472-67760491 | None:intergenic | 45.0% |
| !! | CCTTGGCATTTTTGGAAGCA+GGG | + | chr1.4:67761623-67761642 | MS.gene056094:intron | 45.0% |
| !! | GGGTTGACTTGAATAGAAGC+AGG | - | chr1.4:67762981-67763000 | None:intergenic | 45.0% |
| !! | TCCTTGGCATTTTTGGAAGC+AGG | + | chr1.4:67761622-67761641 | MS.gene056094:intron | 45.0% |
| AAGCGGAGCATAAGAGCGAT+TGG | - | chr1.4:67760437-67760456 | None:intergenic | 50.0% | |
| AAGGCCTTAATGCCGTCGTT+TGG | + | chr1.4:67762197-67762216 | MS.gene056094:CDS | 50.0% | |
| ACGATGATGCAGGGTCAAGA+TGG | + | chr1.4:67763860-67763879 | MS.gene056094:intron | 50.0% | |
| AGAGATCGGAGAAGAGACTG+CGG | + | chr1.4:67762282-67762301 | MS.gene056094:CDS | 50.0% | |
| AGCGGAGCATAAGAGCGATT+GGG | - | chr1.4:67760436-67760455 | None:intergenic | 50.0% | |
| AGCTCAGTTGCATTCGCTAG+TGG | - | chr1.4:67761194-67761213 | None:intergenic | 50.0% | |
| CACAGAAACTAGGACAGAGG+TGG | - | chr1.4:67762946-67762965 | None:intergenic | 50.0% | |
| CACCGAAGCATGGATCAAAC+TGG | + | chr1.4:67761417-67761436 | MS.gene056094:intron | 50.0% | |
| CAGGCAGCAAAAAGAGGTGA+GGG | + | chr1.4:67763393-67763412 | MS.gene056094:intron | 50.0% | |
| CCAGGATCATCGGTACTAAG+CGG | - | chr1.4:67760454-67760473 | None:intergenic | 50.0% | |
| CCCTGCTTCCAAAAATGCCA+AGG | - | chr1.4:67761626-67761645 | None:intergenic | 50.0% | |
| CCTTGAACCACCAGGATCAT+CGG | - | chr1.4:67760464-67760483 | None:intergenic | 50.0% | |
| CCTTGCTCTCTGTCTCTTGT+CGG | + | chr1.4:67763783-67763802 | MS.gene056094:intron | 50.0% | |
| CCTTTGTGCTTCTCGTGAAG+GGG | + | chr1.4:67763986-67764005 | MS.gene056094:intron | 50.0% | |
| CGACAAGAGACAGAGAGCAA+GGG | - | chr1.4:67763785-67763804 | None:intergenic | 50.0% | |
| CGGAGTGTGGAAGAATCTGA+AGG | - | chr1.4:67761310-67761329 | None:intergenic | 50.0% | |
| CTAAAGCTCTCGCATGCACA+TGG | - | chr1.4:67761044-67761063 | None:intergenic | 50.0% | |
| CTTGCTCTCTGTCTCTTGTC+GGG | + | chr1.4:67763784-67763803 | MS.gene056094:intron | 50.0% | |
| CTTTGTGCTTCTCGTGAAGG+GGG | + | chr1.4:67763987-67764006 | MS.gene056094:intron | 50.0% | |
| GAATGTGGCAACCACAGTTG+AGG | + | chr1.4:67764546-67764565 | MS.gene056094:CDS | 50.0% | |
| GCAACGTGCACGCACAAAAA+TGG | + | chr1.4:67762151-67762170 | MS.gene056094:CDS | 50.0% | |
| GCAGCAAGAGAGTGAAGAGA+AGG | + | chr1.4:67761144-67761163 | MS.gene056094:intron | 50.0% | |
| GCGATTGGGATTAAGAAGCG+AGG | - | chr1.4:67760422-67760441 | None:intergenic | 50.0% | |
| GGAATGGTAGTCTAGTCCCA+TGG | - | chr1.4:67760772-67760791 | None:intergenic | 50.0% | |
| GGGAAAGAGATCTCGAGTCT+TGG | + | chr1.4:67763653-67763672 | MS.gene056094:intron | 50.0% | |
| TCAGATACATCCACCCATGC+TGG | - | chr1.4:67762113-67762132 | None:intergenic | 50.0% | |
| TCAGGCAGCAAAAAGAGGTG+AGG | + | chr1.4:67763392-67763411 | MS.gene056094:intron | 50.0% | |
| TGTGCAGTAGTGCCCCAAAA+GGG | + | chr1.4:67761647-67761666 | MS.gene056094:intron | 50.0% | |
| TTAACAGGAGCTCATGGTGG+GGG | - | chr1.4:67760981-67761000 | None:intergenic | 50.0% | |
| TTATCTCCTCGCAGAAGGAG+AGG | - | chr1.4:67764440-67764459 | None:intergenic | 50.0% | |
| ! | GATCTACAGAGAGGCTCTGA+AGG | - | chr1.4:67763339-67763358 | None:intergenic | 50.0% |
| ! | TCACCTCTTTTTGCTGCCTG+AGG | - | chr1.4:67763393-67763412 | None:intergenic | 50.0% |
| ! | TGATCCATGCTTCGGTGTGT+GGG | - | chr1.4:67761414-67761433 | None:intergenic | 50.0% |
| ! | TGCGAGAGCTTTAGTGCACT+AGG | + | chr1.4:67761050-67761069 | MS.gene056094:intron | 50.0% |
| ! | TTGATCCATGCTTCGGTGTG+TGG | - | chr1.4:67761415-67761434 | None:intergenic | 50.0% |
| !! | AAGTCTACAGGAAGTGCTGC+CGG | - | chr1.4:67761330-67761349 | None:intergenic | 50.0% |
| !! | CAATCGTGATGGACCCAACA+CGG | - | chr1.4:67761546-67761565 | None:intergenic | 50.0% |
| !! | CTTAGTACCGATGATCCTGG+TGG | + | chr1.4:67760454-67760473 | MS.gene056094:CDS | 50.0% |
| AAGGAGAGGATCTGCTGACC+TGG | - | chr1.4:67764426-67764445 | None:intergenic | 55.0% | |
| ATGTGTGGAGCTGGACCAGA+AGG | - | chr1.4:67761598-67761617 | None:intergenic | 55.0% | |
| CAGTTGCATTCGCTAGTGGC+AGG | - | chr1.4:67761190-67761209 | None:intergenic | 55.0% | |
| CATGCACATGGTCCGGGAAA+GGG | - | chr1.4:67761032-67761051 | None:intergenic | 55.0% | |
| CCGACAAGAGACAGAGAGCA+AGG | - | chr1.4:67763786-67763805 | None:intergenic | 55.0% | |
| CCGATGATCCTGGTGGTTCA+AGG | + | chr1.4:67760461-67760480 | MS.gene056094:CDS | 55.0% | |
| CGAGATCTCTTTCCCGTACC+AGG | - | chr1.4:67763648-67763667 | None:intergenic | 55.0% | |
| CGGTGGTCCGGTAATCGAAT+TGG | + | chr1.4:67760390-67760409 | MS.gene056094:CDS | 55.0% | |
| CTGTGCAGTAGTGCCCCAAA+AGG | + | chr1.4:67761646-67761665 | MS.gene056094:intron | 55.0% | |
| GATACATCCACCCATGCTGG+AGG | - | chr1.4:67762110-67762129 | None:intergenic | 55.0% | |
| GCCGTCGTTTGGAGATGGTA+AGG | + | chr1.4:67762208-67762227 | MS.gene056094:CDS | 55.0% | |
| GGGTCAAGATGGAGTTGACC+TGG | + | chr1.4:67763871-67763890 | MS.gene056094:intron | 55.0% | |
| GTGGCAACCACAGTTGAGGA+TGG | + | chr1.4:67764550-67764569 | MS.gene056094:CDS | 55.0% | |
| GTTGTCCAAGGCTCATGCGA+AGG | + | chr1.4:67762178-67762197 | MS.gene056094:CDS | 55.0% | |
| TAAGGCCTTCGCATGAGCCT+TGG | - | chr1.4:67762186-67762205 | None:intergenic | 55.0% | |
| ! | CATGCTTCGGTGTGTGGGAA+CGG | - | chr1.4:67761409-67761428 | None:intergenic | 55.0% |
| ! | CCCCTTCACGAGAAGCACAA+AGG | - | chr1.4:67763989-67764008 | None:intergenic | 55.0% |
| ! | TGCGGAGACTTGCTTCTGCA+GGG | + | chr1.4:67762300-67762319 | MS.gene056094:CDS | 55.0% |
| !! | CCGCTTAGTACCGATGATCC+TGG | + | chr1.4:67760451-67760470 | MS.gene056094:CDS | 55.0% |
| CAATCGGTGGGACCCTTTCC+CGG | + | chr1.4:67761017-67761036 | MS.gene056094:intron | 60.0% | |
| CGTTCCCACACACCGAAGCA+TGG | + | chr1.4:67761407-67761426 | MS.gene056094:intron | 60.0% | |
| CTCTCGCATGCACATGGTCC+GGG | - | chr1.4:67761038-67761057 | None:intergenic | 60.0% | |
| CTTCTCGTGAAGGGGGTGGT+GGG | + | chr1.4:67763994-67764013 | MS.gene056094:intron | 60.0% | |
| GCAGATCCTCTCCTTCTGCG+AGG | + | chr1.4:67764431-67764450 | MS.gene056094:intron | 60.0% | |
| GCATGCACATGGTCCGGGAA+AGG | - | chr1.4:67761033-67761052 | None:intergenic | 60.0% | |
| GCGAAGATGACGACGGAGCA+CGG | - | chr1.4:67760351-67760370 | None:intergenic | 60.0% | |
| GCGCCTCAGGCAGCAAAAAG+AGG | + | chr1.4:67763387-67763406 | MS.gene056094:CDS | 60.0% | |
| GCTCTCGCATGCACATGGTC+CGG | - | chr1.4:67761039-67761058 | None:intergenic | 60.0% | |
| GGAGGCAGCCCCACAGTAAT+TGG | - | chr1.4:67762092-67762111 | None:intergenic | 60.0% | |
| TGCTTCTGCAGGGCCTTCTG+AGG | + | chr1.4:67762310-67762329 | MS.gene056094:CDS | 60.0% | |
| TGTGCTTCTCGTGAAGGGGG+TGG | + | chr1.4:67763990-67764009 | MS.gene056094:intron | 60.0% | |
| TTCGCTAGTGGCAGGCCATG+TGG | - | chr1.4:67761182-67761201 | None:intergenic | 60.0% | |
| ! | CTGCGGAGACTTGCTTCTGC+AGG | + | chr1.4:67762299-67762318 | MS.gene056094:CDS | 60.0% |
| !! | GGGTTGCAGAGCTCTGAGAG+AGG | - | chr1.4:67760961-67760980 | None:intergenic | 60.0% |
| CCACCGCGAGAGGAGGTAGA+CGG | - | chr1.4:67760376-67760395 | None:intergenic | 65.0% | |
| GACGGCGGCGAAGATGACGA+CGG | - | chr1.4:67760358-67760377 | None:intergenic | 65.0% | |
| GATTACCGGACCACCGCGAG+AGG | - | chr1.4:67760386-67760405 | None:intergenic | 65.0% | |
| GCTTCTCGTGAAGGGGGTGG+TGG | + | chr1.4:67763993-67764012 | MS.gene056094:intron | 65.0% | |
| TACCTCCTCTCGCGGTGGTC+CGG | + | chr1.4:67760378-67760397 | MS.gene056094:CDS | 65.0% | |
| TGTGGGGCTGCCTCCAGCAT+GGG | + | chr1.4:67762097-67762116 | MS.gene056094:CDS | 65.0% | |
| !! | CAGGAAGTGCTGCCGGAGTG+TGG | - | chr1.4:67761323-67761342 | None:intergenic | 65.0% |
| CCGCCGTCTACCTCCTCTCG+CGG | + | chr1.4:67760370-67760389 | MS.gene056094:CDS | 70.0% | |
| CCGCGAGAGGAGGTAGACGG+CGG | - | chr1.4:67760373-67760392 | None:intergenic | 70.0% | |
| CCGTCTACCTCCTCTCGCGG+TGG | + | chr1.4:67760373-67760392 | MS.gene056094:CDS | 70.0% | |
| CTGTGGGGCTGCCTCCAGCA+TGG | + | chr1.4:67762096-67762115 | MS.gene056094:CDS | 70.0% | |
| TACCGGACCACCGCGAGAGG+AGG | - | chr1.4:67760383-67760402 | None:intergenic | 70.0% | |
| GGGGCTGCCTCCAGCATGGG+TGG | + | chr1.4:67762100-67762119 | MS.gene056094:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 67760289 | 67764718 | 67760289 | ID=MS.gene056094 |
| chr1.4 | mRNA | 67760289 | 67764718 | 67760289 | ID=MS.gene056094.t1;Parent=MS.gene056094 |
| chr1.4 | exon | 67760289 | 67760482 | 67760289 | ID=MS.gene056094.t1.exon1;Parent=MS.gene056094.t1 |
| chr1.4 | CDS | 67760289 | 67760482 | 67760289 | ID=cds.MS.gene056094.t1;Parent=MS.gene056094.t1 |
| chr1.4 | exon | 67762076 | 67762358 | 67762076 | ID=MS.gene056094.t1.exon2;Parent=MS.gene056094.t1 |
| chr1.4 | CDS | 67762076 | 67762358 | 67762076 | ID=cds.MS.gene056094.t1;Parent=MS.gene056094.t1 |
| chr1.4 | exon | 67763319 | 67763408 | 67763319 | ID=MS.gene056094.t1.exon3;Parent=MS.gene056094.t1 |
| chr1.4 | CDS | 67763319 | 67763408 | 67763319 | ID=cds.MS.gene056094.t1;Parent=MS.gene056094.t1 |
| chr1.4 | exon | 67763872 | 67763949 | 67763872 | ID=MS.gene056094.t1.exon4;Parent=MS.gene056094.t1 |
| chr1.4 | CDS | 67763872 | 67763949 | 67763872 | ID=cds.MS.gene056094.t1;Parent=MS.gene056094.t1 |
| chr1.4 | exon | 67764187 | 67764264 | 67764187 | ID=MS.gene056094.t1.exon5;Parent=MS.gene056094.t1 |
| chr1.4 | CDS | 67764187 | 67764264 | 67764187 | ID=cds.MS.gene056094.t1;Parent=MS.gene056094.t1 |
| chr1.4 | exon | 67764361 | 67764426 | 67764361 | ID=MS.gene056094.t1.exon6;Parent=MS.gene056094.t1 |
| chr1.4 | CDS | 67764361 | 67764426 | 67764361 | ID=cds.MS.gene056094.t1;Parent=MS.gene056094.t1 |
| chr1.4 | exon | 67764511 | 67764591 | 67764511 | ID=MS.gene056094.t1.exon7;Parent=MS.gene056094.t1 |
| chr1.4 | CDS | 67764511 | 67764591 | 67764511 | ID=cds.MS.gene056094.t1;Parent=MS.gene056094.t1 |
| chr1.4 | exon | 67764689 | 67764718 | 67764689 | ID=MS.gene056094.t1.exon8;Parent=MS.gene056094.t1 |
| chr1.4 | CDS | 67764689 | 67764718 | 67764689 | ID=cds.MS.gene056094.t1;Parent=MS.gene056094.t1 |
| Gene Sequence |
| Protein sequence |
