AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene22233

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene22233.t1 MTR_3g449590 98.004 451 9 0 1 451 1 451 0.0 903
MS.gene22233.t1 MTR_5g090160 77.727 440 95 3 14 450 10 449 0.0 687
MS.gene22233.t1 MTR_7g110710 51.126 444 209 4 10 449 4 443 1.15e-155 449
MS.gene22233.t1 MTR_7g110710 51.126 444 209 4 10 449 4 443 1.65e-155 449
MS.gene22233.t1 MTR_1g086030 52.074 434 202 2 9 442 46 473 2.47e-154 447
MS.gene22233.t1 MTR_3g096330 46.934 473 219 6 1 447 8 474 1.50e-140 421
MS.gene22233.t1 MTR_2g435340 49.751 402 191 3 43 439 33 428 3.17e-140 409
MS.gene22233.t1 MTR_4g120730 48.883 403 203 2 40 441 33 433 3.21e-140 410
MS.gene22233.t1 MTR_8g098840 50.125 401 198 2 43 442 40 439 1.58e-138 406
MS.gene22233.t1 MTR_1g100060 49.005 402 203 2 43 443 89 489 3.42e-136 401
MS.gene22233.t1 MTR_7g088550 50.000 404 199 3 43 443 46 449 8.80e-136 399
MS.gene22233.t1 MTR_7g078680 46.405 459 233 4 1 447 1 458 1.60e-134 396
MS.gene22233.t1 MTR_1g100050 48.259 402 206 2 43 443 46 446 4.69e-133 392
MS.gene22233.t1 MTR_8g028725 48.878 401 203 2 43 442 51 450 3.20e-132 390
MS.gene22233.t1 MTR_1g086030 50.396 379 172 3 66 442 5 369 6.80e-131 384
MS.gene22233.t1 MTR_1g100040 47.291 406 212 2 43 447 52 456 3.65e-129 382
MS.gene22233.t1 MTR_1g099850 45.522 402 217 2 43 443 51 451 5.07e-125 372
MS.gene22233.t1 MTR_4g124980 46.462 424 217 7 36 451 59 480 2.44e-123 368
MS.gene22233.t1 MTR_2g042740 49.593 369 184 2 41 407 50 418 2.05e-119 357
MS.gene22233.t1 MTR_2g435340 48.923 325 155 3 120 439 45 363 1.21e-109 329
MS.gene22233.t1 MTR_2g083670 48.649 222 99 1 31 252 24 230 2.81e-62 202
MS.gene22233.t1 MTR_5g090140 49.741 193 57 5 260 450 1 155 3.83e-49 165
MS.gene22233.t1 MTR_2g042750 44.444 162 60 5 80 238 148 282 1.41e-28 114
MS.gene22233.t1 MTR_6g028080 26.492 419 253 15 38 440 21 400 1.89e-27 113
MS.gene22233.t1 MTR_6g005630 27.826 345 200 11 16 350 17 322 6.52e-27 112
MS.gene22233.t1 MTR_6g048610 36.207 174 73 3 236 408 20 156 3.16e-24 99.0
MS.gene22233.t1 MTR_3g084380 26.486 370 217 13 28 383 5 333 5.11e-24 103
MS.gene22233.t1 MTR_5g033680 25.185 405 258 10 39 429 51 424 3.54e-23 102
MS.gene22233.t1 MTR_5g043350 27.195 353 210 9 12 357 6 318 3.91e-23 101
MS.gene22233.t1 MTR_4g084050 28.487 337 185 11 13 341 5 293 6.81e-23 100
MS.gene22233.t1 MTR_3g084360 27.027 407 241 14 46 436 23 389 7.53e-23 100
MS.gene22233.t1 MTR_6g005630 25.849 383 218 14 16 378 17 353 1.03e-21 97.1
MS.gene22233.t1 MTR_8g010080 26.844 339 194 11 12 343 6 297 1.05e-20 94.0
MS.gene22233.t1 MTR_3g054320 26.846 298 180 9 52 341 35 302 5.74e-20 92.0
MS.gene22233.t1 MTR_2g103410 28.065 310 177 9 47 343 59 335 1.92e-19 90.9
MS.gene22233.t1 MTR_4g083660 27.807 374 227 14 44 407 6 346 3.48e-19 89.4
MS.gene22233.t1 MTR_3g030540 25.781 384 243 12 37 410 60 411 4.51e-19 89.7
MS.gene22233.t1 MTR_2g060350 25.323 387 231 14 47 414 74 421 7.71e-19 89.0
MS.gene22233.t1 MTR_8g077320 28.674 279 175 8 140 413 97 356 7.76e-19 88.2
MS.gene22233.t1 MTR_7g091840 24.786 351 218 13 48 386 66 382 8.61e-18 85.1
MS.gene22233.t1 MTR_1g086390 24.816 407 258 14 47 435 81 457 1.19e-17 85.5
MS.gene22233.t1 MTR_7g092470 25.890 309 189 8 46 341 47 328 1.36e-17 85.5
MS.gene22233.t1 MTR_4g094715 24.408 422 274 13 39 444 56 448 1.78e-17 84.7
MS.gene22233.t1 MTR_8g065010 24.802 379 212 12 46 385 106 450 2.12e-17 84.7
MS.gene22233.t1 MTR_1g012390 26.380 326 202 12 33 350 16 311 5.39e-17 82.8
MS.gene22233.t1 MTR_5g034090 25.073 343 184 13 47 350 121 429 6.50e-17 83.6
MS.gene22233.t1 MTR_8g008765 26.299 308 187 9 48 350 32 304 7.19e-17 82.0
MS.gene22233.t1 MTR_7g110050 24.658 438 274 13 30 450 59 457 7.80e-17 82.8
MS.gene22233.t1 MTR_1g052315 22.943 401 261 14 46 433 63 428 1.05e-16 82.4
MS.gene22233.t1 MTR_2g103650 26.129 310 180 10 46 339 27 303 1.72e-16 81.6
MS.gene22233.t1 MTR_2g103410 27.586 290 164 9 47 323 59 315 3.47e-16 79.7
MS.gene22233.t1 MTR_8g009810 31.295 278 165 11 148 416 121 381 6.31e-16 79.7
MS.gene22233.t1 MTR_1g088160 26.875 320 178 10 49 350 37 318 6.57e-16 79.7
MS.gene22233.t1 MTR_2g032710 24.351 308 204 7 152 444 157 450 1.05e-15 79.3
MS.gene22233.t1 MTR_8g010090 26.332 319 182 10 48 351 32 312 1.17e-15 79.0
MS.gene22233.t1 MTR_1g013740 26.202 416 239 19 45 450 33 390 1.40e-15 78.6
MS.gene22233.t1 MTR_7g035415 25.532 329 204 10 34 355 27 321 1.75e-15 77.8
MS.gene22233.t1 MTR_2g049400 27.036 307 183 9 44 340 25 300 1.90e-15 78.2
MS.gene22233.t1 MTR_8g008700 30.769 195 113 4 160 350 51 227 3.17e-15 76.3
MS.gene22233.t1 MTR_8g065030 23.545 378 247 12 47 413 65 411 3.21e-15 77.8
MS.gene22233.t1 MTR_0157s0060 28.159 277 168 9 168 436 106 359 3.37e-15 77.4
MS.gene22233.t1 MTR_4g034020 28.159 277 168 9 168 436 106 359 3.37e-15 77.4
MS.gene22233.t1 MTR_5g034090 25.316 316 163 13 47 323 121 402 1.14e-14 75.9
MS.gene22233.t1 MTR_1g013730 25.191 393 243 14 45 431 25 372 2.99e-14 74.3
MS.gene22233.t1 MTR_7g091850 24.675 308 188 12 47 343 76 350 6.12e-14 73.9
MS.gene22233.t1 MTR_8g010070 30.319 188 110 4 160 343 129 299 9.34e-14 73.2
MS.gene22233.t1 MTR_8g010110 25.633 316 188 11 48 351 32 312 9.63e-14 73.2
MS.gene22233.t1 MTR_2g435640 25.420 417 237 18 47 436 53 422 1.29e-13 72.8
MS.gene22233.t1 MTR_8g010050 25.407 307 171 10 49 345 33 291 2.11e-13 71.6
MS.gene22233.t1 MTR_8g010040 25.063 399 240 15 43 421 28 387 4.91e-13 70.9
MS.gene22233.t1 MTR_8g031180 32.275 189 107 4 201 380 71 247 7.69e-13 69.3
MS.gene22233.t1 MTR_4g120320 23.167 341 193 10 47 345 52 365 1.24e-12 69.7
MS.gene22233.t1 MTR_3g438050 25.795 283 176 9 45 323 25 277 2.68e-12 68.6
MS.gene22233.t1 MTR_7g113910 25.830 271 139 8 160 425 97 310 2.50e-11 65.5
MS.gene22233.t1 MTR_2g058840 28.761 226 126 9 128 343 94 294 7.13e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene22233.t1 AT4G23820 76.279 430 99 2 12 441 7 433 0.0 686
MS.gene22233.t1 AT5G41870 68.694 444 133 3 11 451 9 449 0.0 622
MS.gene22233.t1 AT3G62110 52.969 421 195 3 14 433 11 429 1.94e-158 457
MS.gene22233.t1 AT3G62110 52.969 421 195 3 14 433 11 429 1.94e-158 457
MS.gene22233.t1 AT4G33440 52.246 423 193 5 33 451 56 473 6.11e-142 415
MS.gene22233.t1 AT3G16850 48.046 435 220 4 14 447 7 436 5.01e-137 401
MS.gene22233.t1 AT3G48950 44.954 436 234 4 13 443 8 442 5.48e-134 394
MS.gene22233.t1 AT3G61490 46.853 429 222 4 17 443 17 441 1.97e-132 390
MS.gene22233.t1 AT3G61490 46.853 429 222 4 17 443 17 441 1.97e-132 390
MS.gene22233.t1 AT3G61490 46.853 429 222 4 17 443 17 441 1.97e-132 390
MS.gene22233.t1 AT3G61490 46.853 429 222 4 17 443 32 456 2.02e-132 391
MS.gene22233.t1 AT3G61490 46.853 429 222 4 17 443 130 554 8.97e-132 393
MS.gene22233.t1 AT4G23500 46.914 405 213 2 43 446 64 467 2.62e-127 378
MS.gene22233.t1 AT2G23900 44.218 441 238 5 14 447 19 458 4.43e-126 374
MS.gene22233.t1 AT5G49215 45.137 401 219 1 42 441 36 436 4.65e-121 360
MS.gene22233.t1 AT5G49215 45.432 405 212 2 42 441 38 438 4.69e-121 360
MS.gene22233.t1 AT3G42950 46.336 423 221 6 20 439 40 459 8.03e-118 353
MS.gene22233.t1 AT3G06770 45.025 402 210 3 43 439 39 434 2.90e-117 351
MS.gene22233.t1 AT3G06770 45.025 402 210 3 43 439 40 435 3.26e-117 350
MS.gene22233.t1 AT1G19170 46.535 404 210 6 41 440 81 482 3.39e-114 345
MS.gene22233.t1 AT3G06770 44.809 366 191 3 79 439 6 365 1.12e-103 313
MS.gene22233.t1 AT3G06770 44.809 366 191 3 79 439 6 365 1.12e-103 313
MS.gene22233.t1 AT3G06770 42.769 325 175 3 120 439 29 347 5.13e-86 268
MS.gene22233.t1 AT3G15720 29.976 417 229 16 44 441 21 393 3.06e-29 119
MS.gene22233.t1 AT3G15720 29.976 417 229 16 44 441 20 392 3.15e-29 119
MS.gene22233.t1 AT2G41850 28.723 376 224 13 46 409 67 410 1.73e-28 117
MS.gene22233.t1 AT3G15720 29.976 417 226 17 44 441 20 389 2.85e-27 114
MS.gene22233.t1 AT3G15720 31.250 336 181 13 123 441 27 329 6.73e-26 108
MS.gene22233.t1 AT5G17200 30.744 309 174 10 47 350 39 312 3.73e-25 107
MS.gene22233.t1 AT5G14650 26.705 352 220 11 1 343 1 323 6.63e-24 103
MS.gene22233.t1 AT1G56710 25.974 462 286 17 8 444 2 432 3.09e-23 102
MS.gene22233.t1 AT3G57790 28.754 313 181 9 46 341 34 321 3.28e-23 102
MS.gene22233.t1 AT3G57790 28.754 313 181 9 46 341 34 321 3.28e-23 102
MS.gene22233.t1 AT3G57510 25.707 389 247 12 43 420 64 421 3.60e-23 101
MS.gene22233.t1 AT3G26610 25.330 379 236 11 48 412 68 413 2.53e-22 99.8
MS.gene22233.t1 AT5G14650 26.506 332 206 11 1 323 1 303 7.79e-21 93.2
MS.gene22233.t1 AT1G10640 23.798 416 255 12 44 426 116 502 2.00e-20 94.4
MS.gene22233.t1 AT1G70500 24.598 435 272 13 4 427 35 424 1.31e-19 91.3
MS.gene22233.t1 AT1G02460 25.240 416 264 12 48 444 90 477 1.41e-19 91.7
MS.gene22233.t1 AT1G60590 23.342 377 218 11 48 385 124 468 1.87e-19 91.3
MS.gene22233.t1 AT4G35670 28.354 328 185 10 34 350 15 303 3.75e-19 89.4
MS.gene22233.t1 AT2G43870 27.105 380 216 13 11 383 2 327 4.77e-19 89.0
MS.gene22233.t1 AT4G32375 31.220 205 120 4 150 350 19 206 7.05e-19 89.0
MS.gene22233.t1 AT3G59850 27.470 415 243 14 44 447 64 431 8.10e-19 89.0
MS.gene22233.t1 AT5G27530 26.276 392 232 13 48 428 54 399 8.94e-19 89.0
MS.gene22233.t1 AT3G59850 28.000 375 225 12 44 407 20 360 1.27e-18 87.8
MS.gene22233.t1 AT3G07970 29.386 228 142 4 160 380 167 382 1.86e-18 87.8
MS.gene22233.t1 AT4G32380 32.735 223 121 7 148 366 116 313 3.65e-18 87.0
MS.gene22233.t1 AT1G23460 24.812 399 254 14 41 427 36 400 5.00e-18 86.3
MS.gene22233.t1 AT5G44840 26.753 385 246 12 49 428 26 379 5.53e-18 85.9
MS.gene22233.t1 AT4G35670 33.171 205 117 5 150 350 8 196 5.90e-18 84.3
MS.gene22233.t1 AT1G23460 24.812 399 254 14 41 427 60 424 6.06e-18 86.3
MS.gene22233.t1 AT5G39910 25.893 336 191 10 13 340 10 295 3.59e-17 83.2
MS.gene22233.t1 AT2G43890 24.242 429 261 14 15 431 9 385 6.80e-17 82.8
MS.gene22233.t1 AT1G48100 22.760 413 271 12 49 444 82 463 1.69e-16 82.0
MS.gene22233.t1 AT2G15470 24.153 443 273 14 12 436 5 402 2.05e-16 81.3
MS.gene22233.t1 AT2G43880 27.746 346 210 12 42 380 26 338 2.15e-16 81.3
MS.gene22233.t1 AT2G43880 27.356 329 195 11 42 365 26 315 2.67e-16 80.1
MS.gene22233.t1 AT2G26620 24.079 407 263 12 43 436 27 400 3.70e-16 80.5
MS.gene22233.t1 AT1G02790 27.469 324 190 11 8 323 15 301 3.84e-16 80.5
MS.gene22233.t1 AT2G15460 24.138 435 268 13 12 429 5 394 4.28e-16 80.5
MS.gene22233.t1 AT1G80170 23.284 408 258 14 47 436 53 423 6.01e-16 80.1
MS.gene22233.t1 AT2G15450 24.153 443 273 14 12 436 5 402 7.82e-16 79.7
MS.gene22233.t1 AT2G40310 24.020 408 264 13 43 436 27 402 9.30e-16 79.3
MS.gene22233.t1 AT5G44830 29.710 276 157 9 160 428 75 320 1.03e-15 78.6
MS.gene22233.t1 AT4G32380 34.444 180 97 6 148 323 116 278 2.81e-15 77.8
MS.gene22233.t1 AT1G80140 27.386 241 146 6 148 383 59 275 4.63e-15 76.6
MS.gene22233.t1 AT4G01890 25.392 319 195 9 49 350 67 359 9.54e-15 76.6
MS.gene22233.t1 AT1G05650 27.652 264 165 8 160 413 122 369 1.27e-14 75.9
MS.gene22233.t1 AT1G43080 24.570 407 263 13 43 436 27 402 1.45e-14 75.5
MS.gene22233.t1 AT4G32370 31.500 200 113 6 149 339 123 307 2.90e-14 74.3
MS.gene22233.t1 AT1G78400 24.190 401 256 14 49 436 37 402 2.94e-14 74.7
MS.gene22233.t1 AT1G17150 25.121 414 248 16 43 436 29 400 4.91e-14 73.9
MS.gene22233.t1 AT1G43090 24.495 396 256 12 43 426 27 391 5.07e-14 74.3
MS.gene22233.t1 AT1G05660 27.273 264 166 9 160 413 122 369 1.69e-13 72.4
MS.gene22233.t1 AT4G13760 24.029 412 259 14 43 436 27 402 1.87e-13 72.4
MS.gene22233.t1 AT1G43100 24.242 396 257 12 43 426 27 391 2.26e-13 72.4
MS.gene22233.t1 AT3G14040 24.163 418 256 12 46 444 70 445 2.37e-13 72.0
MS.gene22233.t1 AT1G65570 26.282 312 196 11 15 323 3 283 3.36e-13 71.2
MS.gene22233.t1 AT4G18180 31.944 216 119 8 138 343 119 316 6.63e-13 70.5
MS.gene22233.t1 AT3G07850 23.499 383 236 11 81 444 100 444 1.38e-12 69.7
MS.gene22233.t1 AT2G43860 26.316 399 253 16 46 436 32 397 3.19e-11 65.5

Find 129 sgRNAs with CRISPR-Local

Find 332 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTCGATATGTCACGATTT+TGG 0.231140 3.4:-39586838 MS.gene22233:CDS
CATTCAGGGCAGCTATTTAT+AGG 0.235860 3.4:-39590941 MS.gene22233:CDS
CGTTGAACTCAAAGGCATTC+AGG 0.260178 3.4:-39590956 MS.gene22233:CDS
TCTTCATTCTTTAGAGGTTA+TGG 0.263528 3.4:-39587755 MS.gene22233:intron
ACATATCGCTCATGAATAAT+TGG 0.275158 3.4:+39585882 None:intergenic
AGAAATGGGAGAAGAAAATA+AGG 0.277810 3.4:+39591087 None:intergenic
ATTGCACCTTTACCATCTTA+TGG 0.281917 3.4:-39587720 MS.gene22233:CDS
TTCTATGATATCAACCTTCA+TGG 0.286313 3.4:-39586021 MS.gene22233:CDS
TTTATAGGATTCAGCACTTA+AGG 0.299188 3.4:-39590926 MS.gene22233:CDS
TAGAAACAAATCTCAGTAAA+AGG 0.304924 3.4:+39586039 None:intergenic
GATGGTAAAGGTGCAATTAA+AGG 0.313514 3.4:+39587726 None:intergenic
TTCTTTAGAGGTTATGGAAT+TGG 0.313836 3.4:-39587749 MS.gene22233:intron
TTCACAACTGGTAGAGCATT+AGG 0.314497 3.4:+39586135 None:intergenic
GAATTACAATTAAGAGTGTT+TGG 0.330158 3.4:-39586110 MS.gene22233:CDS
AGGCGGAGATAGAAGAGAAA+TGG 0.330322 3.4:+39591072 None:intergenic
ACGATTTCCATAACCGATTT+CGG 0.346257 3.4:-39590999 MS.gene22233:CDS
AATTACAATTAAGAGTGTTT+GGG 0.348788 3.4:-39586109 MS.gene22233:CDS
GGCGGAGATAGAAGAGAAAT+GGG 0.375369 3.4:+39591073 None:intergenic
TCACAACTGGTAGAGCATTA+GGG 0.385260 3.4:+39586136 None:intergenic
ATCACGATCCGACGTATAAC+CGG 0.387708 3.4:-39586393 MS.gene22233:CDS
GGTGAGAATGGAACAATTGA+TGG 0.402464 3.4:-39587151 MS.gene22233:CDS
AGGAAGAGGAGGAAAGTTGA+GGG 0.413827 3.4:+39591107 None:intergenic
GAGGAGGAAAGTTGAGGGGA+TGG 0.420793 3.4:+39591112 None:intergenic
CCTACGGCAATGCCGGCAAA+TGG 0.426213 3.4:+39586363 None:intergenic
GACACCGCCGAAATCGGTTA+TGG 0.431442 3.4:+39590992 None:intergenic
ATGACTCTTTATCTTGCTGC+TGG 0.433521 3.4:-39590831 MS.gene22233:CDS
TCATATTCCACAACATGTTC+CGG 0.439214 3.4:-39591050 MS.gene22233:CDS
ATTGTAATTCCCTTCACAAC+TGG 0.439300 3.4:+39586123 None:intergenic
GGGTCAATTCCATCAGTGTT+AGG 0.443337 3.4:+39586801 None:intergenic
TTGCAAGCTGGTTTGATACA+TGG 0.446222 3.4:-39586075 MS.gene22233:CDS
AGCTGAGCAGCCAAGAGCCT+GGG 0.448563 3.4:-39585912 MS.gene22233:CDS
GTCGCCGACACCGCCGAAAT+CGG 0.451079 3.4:+39590986 None:intergenic
ATCAACCTTCATGGTGAGAC+AGG 0.453248 3.4:-39586012 MS.gene22233:CDS
ACCGGATCGTCTCCATTTGC+CGG 0.454556 3.4:-39586375 MS.gene22233:CDS
GAGGACTCGTACATATCAAC+AGG 0.469076 3.4:-39586486 MS.gene22233:CDS
TTCCAATGTTTGTCTTAATG+TGG 0.470222 3.4:+39586268 None:intergenic
ACACACCAGGAGGCACATAA+AGG 0.475424 3.4:+39590886 None:intergenic
CAGCTGAGCAGCCAAGAGCC+TGG 0.477571 3.4:-39585913 MS.gene22233:CDS
GTTGAACTCAAAGGCATTCA+GGG 0.483818 3.4:-39590955 MS.gene22233:CDS
CACTATGCCGGAACATGTTG+TGG 0.484354 3.4:+39591043 None:intergenic
CGCGACTCTCCTAACACTGA+TGG 0.487424 3.4:-39586810 MS.gene22233:CDS
AAACTTATATACCTTCCTCC+TGG 0.491546 3.4:+39587681 None:intergenic
CTTCATGGTGAGACAGGATC+AGG 0.492771 3.4:-39586006 MS.gene22233:CDS
TAAGAGTGTTTGGGGTGTGA+AGG 0.492885 3.4:-39586100 MS.gene22233:CDS
TTCACTGCCTACGGCAATGC+CGG 0.494196 3.4:+39586356 None:intergenic
GCCTCCTGGTGTGTACTTAA+CGG 0.495904 3.4:-39590877 MS.gene22233:CDS
ATGTGTATATAGAAAATTCA+AGG 0.496847 3.4:-39586212 MS.gene22233:CDS
TCCCTTCCTCTTCCATAAGA+TGG 0.498572 3.4:+39587708 None:intergenic
CCTTTACCATCTTATGGAAG+AGG 0.498720 3.4:-39587714 MS.gene22233:CDS
GTGTCGGAACGGCACTATGC+CGG 0.505281 3.4:+39591031 None:intergenic
TTTCACAAAAGGTTAGTCCT+TGG 0.506890 3.4:-39585945 MS.gene22233:CDS
GCCGGCAAATGGAGACGATC+CGG 0.511985 3.4:+39586374 None:intergenic
GGGAGAAGAAAATAAGGAAG+AGG 0.519954 3.4:+39591093 None:intergenic
ACGCTCCTTTATGTGCCTCC+TGG 0.523955 3.4:-39590891 MS.gene22233:CDS
AAGGAAGAGGAGGAAAGTTG+AGG 0.524967 3.4:+39591106 None:intergenic
ATCCACATTAAGACAAACAT+TGG 0.527637 3.4:-39586270 MS.gene22233:CDS
TTGTGGCTGTGAAGAGTGGA+TGG 0.529310 3.4:-39586455 MS.gene22233:CDS
TGGTACAAGACCCAGGCTCT+TGG 0.531741 3.4:+39585902 None:intergenic
CCATTTGCCGGCATTGCCGT+AGG 0.539892 3.4:-39586363 MS.gene22233:CDS
CCTCTTCCATAAGATGGTAA+AGG 0.544572 3.4:+39587714 None:intergenic
GCCGTAGGCAGTGAAACATC+AGG 0.545753 3.4:-39586348 MS.gene22233:CDS
AACCTCTTCAACATGGGAGT+TGG 0.547865 3.4:-39586294 MS.gene22233:CDS
GATTTCGGCGGTGTCGGCGA+CGG 0.548162 3.4:-39590984 MS.gene22233:CDS
TACCATCTTATGGAAGAGGA+AGG 0.549191 3.4:-39587710 MS.gene22233:CDS
ATTAAGACAAACATTGGAAG+AGG 0.549285 3.4:-39586264 MS.gene22233:CDS
AAATCGTGTCGGCGCGGTGT+CGG 0.549772 3.4:+39591015 None:intergenic
GCCTGATGTTTCACTGCCTA+CGG 0.550163 3.4:+39586347 None:intergenic
AACTTATATACCTTCCTCCT+GGG 0.554752 3.4:+39587682 None:intergenic
TGGCTGCTCAGCTGAGAACA+TGG 0.555382 3.4:+39585922 None:intergenic
TCGTGATGCCATTGCTAGGA+CGG 0.555883 3.4:+39586409 None:intergenic
GGAACATGTTGTGGAATATG+AGG 0.557663 3.4:+39591052 None:intergenic
AGAAGAAAATAAGGAAGAGG+AGG 0.558917 3.4:+39591096 None:intergenic
ATAACCGATTTCGGCGGTGT+CGG 0.559095 3.4:-39590990 MS.gene22233:CDS
TATATAGAAAATTCAAGGCA+AGG 0.561312 3.4:-39586207 MS.gene22233:CDS
CTGATCCTGTCTCACCATGA+AGG 0.563032 3.4:+39586007 None:intergenic
AACTGGATGTATATTCCAGA+AGG 0.565675 3.4:+39587006 None:intergenic
CACATCAACCTCTTCAACAT+GGG 0.568109 3.4:-39586300 MS.gene22233:CDS
AAGAGTGGATGGGATGAATA+CGG 0.568218 3.4:-39586444 MS.gene22233:CDS
CGGATCGTGATGCCATTGCT+AGG 0.571230 3.4:+39586405 None:intergenic
ATATACATCCAGTTTACTGC+AGG 0.571488 3.4:-39586997 MS.gene22233:intron
GTGTCGGCGCGGTGTCGGAA+CGG 0.576004 3.4:+39591020 None:intergenic
TAATGCTCTACCAGTTGTGA+AGG 0.579332 3.4:-39586133 MS.gene22233:CDS
ATTACAATTAAGAGTGTTTG+GGG 0.579707 3.4:-39586108 MS.gene22233:CDS
CTCTCCGTTAAGTACACACC+AGG 0.580616 3.4:+39590873 None:intergenic
TGCTGTTATTAAAGCCACAC+AGG 0.582451 3.4:-39590808 MS.gene22233:intron
CTCAGCTGAGAACATGGCCA+AGG 0.585760 3.4:+39585928 None:intergenic
GAAGGGAGCTCCCAGGAGGA+AGG 0.586526 3.4:-39587692 MS.gene22233:CDS
AAGTTCAAATGTCTGCATAG+AGG 0.586689 3.4:-39586505 MS.gene22233:CDS
TGGTGATGTAGGTGACCATC+CGG 0.592460 3.4:-39586172 MS.gene22233:CDS
TACCAACTCCCATGTTGAAG+AGG 0.592901 3.4:+39586292 None:intergenic
AATGGAACAATTGATGGGCA+AGG 0.593507 3.4:-39587145 MS.gene22233:CDS
GGAAGAGGAGGAAAGTTGAG+GGG 0.596179 3.4:+39591108 None:intergenic
GTTCGCGATGTAATCATCAC+AGG 0.596369 3.4:-39587642 MS.gene22233:intron
CGGCAGAACGTTGAACTCAA+AGG 0.598960 3.4:-39590964 MS.gene22233:CDS
ACCATCTTATGGAAGAGGAA+GGG 0.599680 3.4:-39587709 MS.gene22233:CDS
GCACATCAACCTCTTCAACA+TGG 0.599969 3.4:-39586301 MS.gene22233:CDS
GGAAGAGGAAGGGAGCTCCC+AGG 0.601338 3.4:-39587699 MS.gene22233:CDS
GATGAATACGGTATTTCATA+CGG 0.605569 3.4:-39586432 MS.gene22233:CDS
TCATACGGCCGTCCTAGCAA+TGG 0.608461 3.4:-39586417 MS.gene22233:CDS
GTGAGAATGGAACAATTGAT+GGG 0.611373 3.4:-39587150 MS.gene22233:CDS
AAGACAAACATTGGAAGAGG+AGG 0.612632 3.4:-39586261 MS.gene22233:CDS
ATCGGTTATGGAAATCGTGT+CGG 0.613368 3.4:+39591004 None:intergenic
GATCTTGTGGCTGTGAAGAG+TGG 0.616644 3.4:-39586459 MS.gene22233:CDS
GAGATGTATGGTGGAACATG+TGG 0.617873 3.4:-39587123 MS.gene22233:CDS
GTTGAAGAGGTTGATGTGCT+CGG 0.617924 3.4:+39586305 None:intergenic
AATGCTCTACCAGTTGTGAA+GGG 0.623141 3.4:-39586132 MS.gene22233:CDS
AAAACATCAGAACACTTCCA+AGG 0.628023 3.4:+39585973 None:intergenic
GAATAATTGGTACAAGACCC+AGG 0.628592 3.4:+39585895 None:intergenic
ATCAACAGGAGATGATCTTG+TGG 0.639297 3.4:-39586472 MS.gene22233:CDS
GATCAGGTAGATCTCCACCT+TGG 0.642012 3.4:-39585990 MS.gene22233:CDS
TTGATGGGCAAGGAGATGTA+TGG 0.649620 3.4:-39587135 MS.gene22233:CDS
AACACTGATGGAATTGACCC+AGG 0.651883 3.4:-39586798 MS.gene22233:intron
ACTGGATGTATATTCCAGAA+GGG 0.663404 3.4:+39587007 None:intergenic
ACATGTTGTGGAATATGAGG+CGG 0.668874 3.4:+39591055 None:intergenic
ATGTATGGTGGAACATGTGG+AGG 0.680192 3.4:-39587120 MS.gene22233:CDS
AAAATAGCAATAAACCTGTG+TGG 0.687799 3.4:+39590794 None:intergenic
ACATCAGAACACTTCCAAGG+TGG 0.689498 3.4:+39585976 None:intergenic
ATGGGCAAGGAGATGTATGG+TGG 0.690153 3.4:-39587132 MS.gene22233:CDS
CATCGCGAACTCCATCGCCG+TGG 0.694091 3.4:+39587655 None:intergenic
TGTGGCTGTGAAGAGTGGAT+GGG 0.695217 3.4:-39586454 MS.gene22233:CDS
AGAGGAAGGGAGCTCCCAGG+AGG 0.696203 3.4:-39587696 MS.gene22233:CDS
TTATGGAAATCGTGTCGGCG+CGG 0.702772 3.4:+39591009 None:intergenic
TCCGTTAAGTACACACCAGG+AGG 0.707120 3.4:+39590876 None:intergenic
ATTCAGCACTTAAGGAGACG+TGG 0.715137 3.4:-39590918 MS.gene22233:CDS
GAGACGATCCGGTTATACGT+CGG 0.721010 3.4:+39586385 None:intergenic
ATTTCCATAACCGATTTCGG+CGG 0.727085 3.4:-39590996 MS.gene22233:CDS
CAGCACTTAAGGAGACGTGG+TGG 0.748468 3.4:-39590915 MS.gene22233:CDS
GTAGGCAGTGAAACATCAGG+CGG 0.764061 3.4:-39586345 MS.gene22233:CDS
TCAGTGTTAGGAGAGTCGCG+AGG 0.797208 3.4:+39586813 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATAAATTTAAAAAATT+GGG - chr3.4:39587638-39587657 MS.gene22233:intron 0.0%
!!! TTTTTATAAATTTAAAAAAT+TGG - chr3.4:39587637-39587656 MS.gene22233:intron 0.0%
!!! TTTTTTAAATTTATAAAAAA+TGG + chr3.4:39587636-39587655 None:intergenic 0.0%
!! AAAATATTTACTTATTATAG+TGG - chr3.4:39586678-39586697 MS.gene22233:intron 10.0%
!! AAATATTTACTTATTATAGT+GGG - chr3.4:39586679-39586698 MS.gene22233:intron 10.0%
!! AAATTAGAACAAAAAAAAAA+AGG + chr3.4:39586284-39586303 None:intergenic 10.0%
!! AATTAGAACAAAAAAAAAAA+GGG + chr3.4:39586283-39586302 None:intergenic 10.0%
!! AATTTATAAAAAATGGAAAA+TGG + chr3.4:39587629-39587648 None:intergenic 10.0%
!! ACCTATTATATATATTATAA+TGG + chr3.4:39587141-39587160 None:intergenic 10.0%
!! ATATTTAATATGATTAAAGA+TGG - chr3.4:39586738-39586757 MS.gene22233:intron 10.0%
!! CAATAAATTACTTTAAATTA+TGG + chr3.4:39587211-39587230 None:intergenic 10.0%
!! CCTATTATATATATTATAAT+GGG + chr3.4:39587140-39587159 None:intergenic 10.0%
!! CTATTATATATATTATAATG+GGG + chr3.4:39587139-39587158 None:intergenic 10.0%
!! TATTATATATATTATAATGG+GGG + chr3.4:39587138-39587157 None:intergenic 10.0%
!! TATTTAATATGATTAAAGAT+GGG - chr3.4:39586739-39586758 MS.gene22233:intron 10.0%
!! TGTTATATGAAAAAAAAATT+AGG - chr3.4:39586524-39586543 MS.gene22233:intron 10.0%
!!! AACAATAAATTATATTTTGA+TGG - chr3.4:39588275-39588294 MS.gene22233:intron 10.0%
!!! AATAATTGTAACATATTTTT+TGG - chr3.4:39588874-39588893 MS.gene22233:intron 10.0%
!!! AATTTTTTTTTCATATAACA+AGG + chr3.4:39586524-39586543 None:intergenic 10.0%
!!! ACAATAAATTATATTTTGAT+GGG - chr3.4:39588276-39588295 MS.gene22233:intron 10.0%
!!! CAAAAAATCATAATTTTTAT+GGG + chr3.4:39588195-39588214 None:intergenic 10.0%
!!! TAAATAATTAATTTTTGAAG+AGG + chr3.4:39587596-39587615 None:intergenic 10.0%
!! AAAAGTCAAATTATTGTTTA+AGG + chr3.4:39586973-39586992 None:intergenic 15.0%
!! AACTGTAATATAATAATAAG+AGG + chr3.4:39587568-39587587 None:intergenic 15.0%
!! AATTAACATGAAAATTTGTA+AGG - chr3.4:39586775-39586794 MS.gene22233:intron 15.0%
!! AGTAATTTATTGAAAACAAT+AGG - chr3.4:39587219-39587238 MS.gene22233:intron 15.0%
!! ATGGTAAATATTAGAATTTA+CGG - chr3.4:39587889-39587908 MS.gene22233:intron 15.0%
!! ATTAGAACAAAAAAAAAAAG+GGG + chr3.4:39586282-39586301 None:intergenic 15.0%
!! CATTGAATAACTAATATTTA+TGG - chr3.4:39586549-39586568 MS.gene22233:intron 15.0%
!! CCCATTATAATATATATAAT+AGG - chr3.4:39587137-39587156 MS.gene22233:CDS 15.0%
!! TAGATAAATGATCTTTATAT+TGG - chr3.4:39590315-39590334 MS.gene22233:intron 15.0%
!! TATATATATTAAGTTCTGTT+TGG - chr3.4:39590351-39590370 MS.gene22233:intron 15.0%
!! TTAACTTACTTAAGAATTAT+AGG - chr3.4:39588829-39588848 MS.gene22233:intron 15.0%
!! TTAATATATATAGTAAACCA+AGG + chr3.4:39590343-39590362 None:intergenic 15.0%
!!! AAAGTTTTGAATTACATTTT+AGG + chr3.4:39590143-39590162 None:intergenic 15.0%
!!! AAATCAAAACAAATCTTTTT+TGG + chr3.4:39588220-39588239 None:intergenic 15.0%
!!! AATGAATCTAAAATGTTTAT+TGG - chr3.4:39589685-39589704 MS.gene22233:intron 15.0%
!!! ACAAACATAATTTTGTTTTT+TGG - chr3.4:39586429-39586448 MS.gene22233:CDS 15.0%
!!! ACAAATTAAATAATTTGTCT+AGG - chr3.4:39586883-39586902 MS.gene22233:intron 15.0%
!!! AGATTCATTTTAGTATATTT+GGG + chr3.4:39589674-39589693 None:intergenic 15.0%
!!! ATGAATCTAAAATGTTTATT+GGG - chr3.4:39589686-39589705 MS.gene22233:intron 15.0%
!!! ATTATTGATGATATTACAAA+TGG - chr3.4:39587870-39587889 MS.gene22233:intron 15.0%
!!! ATTTAGTATTGTTTTCTAAT+AGG - chr3.4:39586497-39586516 MS.gene22233:CDS 15.0%
!!! CAAATTAAATAATTTGTCTA+GGG - chr3.4:39586884-39586903 MS.gene22233:intron 15.0%
!!! GCAAAAAATCATAATTTTTA+TGG + chr3.4:39588196-39588215 None:intergenic 15.0%
!!! TAAAAAAAGTACATTCTTTA+AGG + chr3.4:39587025-39587044 None:intergenic 15.0%
!!! TAGATTCATTTTAGTATATT+TGG + chr3.4:39589675-39589694 None:intergenic 15.0%
!! AAAAAACAAAAATGCATCAT+AGG - chr3.4:39590103-39590122 MS.gene22233:intron 20.0%
!! AAAAACAAAAATGCATCATA+GGG - chr3.4:39590104-39590123 MS.gene22233:intron 20.0%
!! AAAAATAAGACTACAGATAA+TGG - chr3.4:39588534-39588553 MS.gene22233:intron 20.0%
!! AAAATAAGACTACAGATAAT+GGG - chr3.4:39588535-39588554 MS.gene22233:intron 20.0%
!! AAAGAAAAAGTTTATTAACC+AGG + chr3.4:39587820-39587839 None:intergenic 20.0%
!! AAGATCATTTATCTAAGTTA+TGG + chr3.4:39590310-39590329 None:intergenic 20.0%
!! AATATAAGTCATGAGATAAT+CGG + chr3.4:39588010-39588029 None:intergenic 20.0%
!! ATGTGTATATAGAAAATTCA+AGG - chr3.4:39590813-39590832 MS.gene22233:CDS 20.0%
!! GTATCATTAATTGAGTTAAT+TGG - chr3.4:39587272-39587291 MS.gene22233:intron 20.0%
!! GTGAATAGTTTATATAAGAT+GGG + chr3.4:39587185-39587204 None:intergenic 20.0%
!! TAAATAATAATGTATTCCAG+CGG + chr3.4:39587506-39587525 None:intergenic 20.0%
!! TAGAAATACAATAGTATAGT+AGG + chr3.4:39587377-39587396 None:intergenic 20.0%
!! TGAATAGTTTATATAAGATG+GGG + chr3.4:39587184-39587203 None:intergenic 20.0%
!! TGTGAATAGTTTATATAAGA+TGG + chr3.4:39587186-39587205 None:intergenic 20.0%
!! TTGAATTCAAAAATTCAACA+AGG + chr3.4:39589960-39589979 None:intergenic 20.0%
!! TTTAAATCCACACAAAAATT+AGG + chr3.4:39589105-39589124 None:intergenic 20.0%
!! TTTGACCATACATTATTTAA+AGG + chr3.4:39588517-39588536 None:intergenic 20.0%
!!! AAGCTTGGTTTTAATTTTAT+AGG + chr3.4:39589805-39589824 None:intergenic 20.0%
!!! AATTACAATTAAGAGTGTTT+GGG - chr3.4:39590916-39590935 MS.gene22233:CDS 20.0%
!!! CTTCTAAAACCTTAATATAA+CGG - chr3.4:39589600-39589619 MS.gene22233:intron 20.0%
!!! GACAAATTATTTAATTTGTG+TGG + chr3.4:39586882-39586901 None:intergenic 20.0%
!!! TACTAATTTTAGATGCTATT+TGG + chr3.4:39589644-39589663 None:intergenic 20.0%
!!! TTACAAATGTTTGCTTTATT+TGG + chr3.4:39590462-39590481 None:intergenic 20.0%
!!! TTCTATTATCAAGTTGAATT+TGG - chr3.4:39588722-39588741 MS.gene22233:intron 20.0%
!!! TTTTCTCAACAATTCTATTT+GGG + chr3.4:39588974-39588993 None:intergenic 20.0%
!!! TTTTTAAGAAAGTAGTTTAG+AGG - chr3.4:39590430-39590449 MS.gene22233:intron 20.0%
!!! TTTTTCTCAACAATTCTATT+TGG + chr3.4:39588975-39588994 None:intergenic 20.0%
! AAATAATAATGTATTCCAGC+GGG + chr3.4:39587505-39587524 None:intergenic 25.0%
! AACATTACACTACCAAATAA+TGG + chr3.4:39589155-39589174 None:intergenic 25.0%
! AACGATTTCATAAGATGAAA+CGG - chr3.4:39588071-39588090 MS.gene22233:intron 25.0%
! ACAGAACATTGAATCAATTA+TGG + chr3.4:39589762-39589781 None:intergenic 25.0%
! ACCTATAAAAATAAGAGTGA+AGG + chr3.4:39589857-39589876 None:intergenic 25.0%
! AGAGATTAGATTTCAAAGAT+TGG + chr3.4:39589829-39589848 None:intergenic 25.0%
! AGTGAATGTTCAAAGTTTAA+TGG - chr3.4:39589189-39589208 MS.gene22233:intron 25.0%
! ATGCTCCTTTAAATAATGTA+TGG - chr3.4:39588509-39588528 MS.gene22233:intron 25.0%
! CCAGGTAATAAAAATGAAAT+TGG + chr3.4:39587802-39587821 None:intergenic 25.0%
! GGAATCAACATTAATAAGTT+TGG + chr3.4:39590289-39590308 None:intergenic 25.0%
! TAGAAACAAATCTCAGTAAA+AGG + chr3.4:39590989-39591008 None:intergenic 25.0%
! TATAAAAATAAGAGTGAAGG+AGG + chr3.4:39589854-39589873 None:intergenic 25.0%
! TATATAGAAAATTCAAGGCA+AGG - chr3.4:39590818-39590837 MS.gene22233:CDS 25.0%
! TATGTTTGTTTCATGTGATA+AGG + chr3.4:39586418-39586437 None:intergenic 25.0%
! TATTCGATTTATTTATGTCC+TGG - chr3.4:39587479-39587498 MS.gene22233:intron 25.0%
! TGAGTATAAATAAATGATCG+AGG - chr3.4:39586848-39586867 MS.gene22233:CDS 25.0%
! TTCAAAAATTCAACAAGGTT+TGG + chr3.4:39589955-39589974 None:intergenic 25.0%
!! ACTCTTGGAATTTAAAATGA+GGG - chr3.4:39588786-39588805 MS.gene22233:intron 25.0%
!! ATAGAAGAGTACATCAATAA+TGG + chr3.4:39588708-39588727 None:intergenic 25.0%
!! TAAAATCCCATATTTGGAAT+AGG - chr3.4:39589020-39589039 MS.gene22233:intron 25.0%
!! TTAGGGTTAAATTTTTCATC+CGG + chr3.4:39590875-39590894 None:intergenic 25.0%
!!! AGGTATATAAGTTTTATCCA+CGG - chr3.4:39589353-39589372 MS.gene22233:intron 25.0%
!!! ATTACAATTAAGAGTGTTTG+GGG - chr3.4:39590917-39590936 MS.gene22233:CDS 25.0%
!!! CCAATTTCATTTTTATTACC+TGG - chr3.4:39587799-39587818 MS.gene22233:intron 25.0%
!!! CTTATTTTTATAGGTGAGAA+TGG - chr3.4:39589862-39589881 MS.gene22233:intron 25.0%
!!! GAATTACAATTAAGAGTGTT+TGG - chr3.4:39590915-39590934 MS.gene22233:CDS 25.0%
!!! TCCTTCACTCTTATTTTTAT+AGG - chr3.4:39589853-39589872 MS.gene22233:intron 25.0%
!!! TGTTTTTGGATTTTCACAAA+AGG - chr3.4:39591069-39591088 MS.gene22233:CDS 25.0%
AAAATAGCAATAAACCTGTG+TGG + chr3.4:39586234-39586253 None:intergenic 30.0%
AAGTTATATCCGTATTTACC+TGG + chr3.4:39590248-39590267 None:intergenic 30.0%
ACAAGTTAAGGAGCTTAAAA+TGG + chr3.4:39588433-39588452 None:intergenic 30.0%
AGAAATGGGAGAAGAAAATA+AGG + chr3.4:39585941-39585960 None:intergenic 30.0%
AGTTATATCCGTATTTACCT+GGG + chr3.4:39590247-39590266 None:intergenic 30.0%
ATCCACATTAAGACAAACAT+TGG - chr3.4:39590755-39590774 MS.gene22233:intron 30.0%
ATGTGTGTTATATATAGTGG+CGG - chr3.4:39587296-39587315 MS.gene22233:intron 30.0%
ATTAAGACAAACATTGGAAG+AGG - chr3.4:39590761-39590780 MS.gene22233:intron 30.0%
ATTTCAAAGATTGGTAAGCT+TGG + chr3.4:39589820-39589839 None:intergenic 30.0%
CTAAAACCTTAATATAACGG+CGG - chr3.4:39589603-39589622 MS.gene22233:intron 30.0%
CTAGACTAAAATCCCATATT+TGG - chr3.4:39589014-39589033 MS.gene22233:intron 30.0%
GATGAATACGGTATTTCATA+CGG - chr3.4:39590593-39590612 MS.gene22233:intron 30.0%
GCAGGTAAAAATTTGATGTA+TGG - chr3.4:39590046-39590065 MS.gene22233:intron 30.0%
GGTATGTGTGTTATATATAG+TGG - chr3.4:39587293-39587312 MS.gene22233:intron 30.0%
GGTGCAAAAATATAAATGTG+AGG + chr3.4:39587356-39587375 None:intergenic 30.0%
TAAAACCTTAATATAACGGC+GGG - chr3.4:39589604-39589623 MS.gene22233:intron 30.0%
TAATTCAAAAGCAGGAGATT+CGG + chr3.4:39587686-39587705 None:intergenic 30.0%
TACCATGTAAATATGACTCT+TGG - chr3.4:39588771-39588790 MS.gene22233:intron 30.0%
TATCTCGTTAATTCAAAAGC+AGG + chr3.4:39587694-39587713 None:intergenic 30.0%
TATGTGTTGTGACCATTATT+TGG - chr3.4:39589140-39589159 MS.gene22233:intron 30.0%
TCTCCTTAAAAGAAGAAGTT+AGG - chr3.4:39590397-39590416 MS.gene22233:intron 30.0%
TGTAAAGTTGAGCTTGAAAT+AGG + chr3.4:39586366-39586385 None:intergenic 30.0%
TGTGTGGATTTAAATGTGAT+TGG - chr3.4:39589111-39589130 MS.gene22233:intron 30.0%
TTCCAAGAGTCATATTTACA+TGG + chr3.4:39588776-39588795 None:intergenic 30.0%
TTCCAATGTTTGTCTTAATG+TGG + chr3.4:39590760-39590779 None:intergenic 30.0%
TTCCTTTCTTCATTCTTTAG+AGG - chr3.4:39589264-39589283 MS.gene22233:intron 30.0%
TTCTATGATATCAACCTTCA+TGG - chr3.4:39591004-39591023 MS.gene22233:CDS 30.0%
TTTATAGGATTCAGCACTTA+AGG - chr3.4:39586099-39586118 MS.gene22233:CDS 30.0%
! AACCTCTAAAGAATGAAGAA+AGG + chr3.4:39589269-39589288 None:intergenic 30.0%
! AATTTTTACCTGCAGTAAAC+TGG + chr3.4:39590039-39590058 None:intergenic 30.0%
! ATAAAAATTGCTGGTGATGT+AGG - chr3.4:39590842-39590861 MS.gene22233:CDS 30.0%
! ATCTAAGCCTAATTTTTGTG+TGG - chr3.4:39589095-39589114 MS.gene22233:intron 30.0%
! CTAGAGTTTCACAAGTTTTA+TGG + chr3.4:39588998-39589017 None:intergenic 30.0%
! GACTCTTGGAATTTAAAATG+AGG - chr3.4:39588785-39588804 MS.gene22233:intron 30.0%
! TCTTCATTCTTTAGAGGTTA+TGG - chr3.4:39589270-39589289 MS.gene22233:intron 30.0%
! TGTCCTAACTTCTTCTTTTA+AGG + chr3.4:39590403-39590422 None:intergenic 30.0%
! TTACTTATTATAGTGGGAAG+AGG - chr3.4:39586685-39586704 MS.gene22233:intron 30.0%
! TTCTTTAGAGGTTATGGAAT+TGG - chr3.4:39589276-39589295 MS.gene22233:intron 30.0%
!! AGCATGCAATTTTCTTGTTT+TGG + chr3.4:39589717-39589736 None:intergenic 30.0%
!!! CTTTTTAACTTATGCTCCAA+GGG + chr3.4:39588317-39588336 None:intergenic 30.0%
AAAACATCAGAACACTTCCA+AGG + chr3.4:39591055-39591074 None:intergenic 35.0%
AAAATGCATCATAGGGATAG+AGG - chr3.4:39590111-39590130 MS.gene22233:intron 35.0%
AAACTTATATACCTTCCTCC+TGG + chr3.4:39589347-39589366 None:intergenic 35.0%
AAATTCCCGCCGTTATATTA+AGG + chr3.4:39589612-39589631 None:intergenic 35.0%
AACAGCTCATTCATGAACTA+TGG - chr3.4:39588566-39588585 MS.gene22233:intron 35.0%
AACTGGATGTATATTCCAGA+AGG + chr3.4:39590022-39590041 None:intergenic 35.0%
AACTTATATACCTTCCTCCT+GGG + chr3.4:39589346-39589365 None:intergenic 35.0%
AAGAGATGTGTTCGATAACA+TGG - chr3.4:39588030-39588049 MS.gene22233:intron 35.0%
AAGTTCAAATGTCTGCATAG+AGG - chr3.4:39590520-39590539 MS.gene22233:intron 35.0%
ACAAAACCAACTGCATAACA+TGG + chr3.4:39588682-39588701 None:intergenic 35.0%
ACAATTGTTTGTGTTTCACC+TGG - chr3.4:39586383-39586402 MS.gene22233:CDS 35.0%
ACTGGATGTATATTCCAGAA+GGG + chr3.4:39590021-39590040 None:intergenic 35.0%
AGAAGAAAATAAGGAAGAGG+AGG + chr3.4:39585932-39585951 None:intergenic 35.0%
AGGCAAGGAATAAAAATTGC+TGG - chr3.4:39590833-39590852 MS.gene22233:CDS 35.0%
AGGTGCAAAACAAAAAACTG+AGG + chr3.4:39587410-39587429 None:intergenic 35.0%
AGTCCTCCTATTCCAAATAT+GGG + chr3.4:39589029-39589048 None:intergenic 35.0%
ATATACATCCAGTTTACTGC+AGG - chr3.4:39590028-39590047 MS.gene22233:intron 35.0%
ATTGCACCTTTACCATCTTA+TGG - chr3.4:39589305-39589324 MS.gene22233:intron 35.0%
ATTGTAATTCCCTTCACAAC+TGG + chr3.4:39590905-39590924 None:intergenic 35.0%
CAATTTCCATGTTATGCAGT+TGG - chr3.4:39588673-39588692 MS.gene22233:intron 35.0%
CCTTGGAGCATAAGTTAAAA+AGG - chr3.4:39588315-39588334 MS.gene22233:intron 35.0%
CTTCAAAGGACTAAAATCAG+TGG - chr3.4:39588599-39588618 MS.gene22233:intron 35.0%
GATTTCAAAGTCAGATGCAA+AGG + chr3.4:39587433-39587452 None:intergenic 35.0%
GGTGCAAAACAAAAAACTGA+GGG + chr3.4:39587409-39587428 None:intergenic 35.0%
GTGAGAATGGAACAATTGAT+GGG - chr3.4:39589875-39589894 MS.gene22233:intron 35.0%
GTGCAAAACAAAAAACTGAG+GGG + chr3.4:39587408-39587427 None:intergenic 35.0%
GTGGATTTAAATGTGATTGG+AGG - chr3.4:39589114-39589133 MS.gene22233:intron 35.0%
TAGTCCTCCTATTCCAAATA+TGG + chr3.4:39589030-39589049 None:intergenic 35.0%
TCATATTCCACAACATGTTC+CGG - chr3.4:39585975-39585994 MS.gene22233:CDS 35.0%
! AATAATTTGTCTAGGGAGAG+TGG - chr3.4:39586891-39586910 MS.gene22233:intron 35.0%
! AATCCCATATTTGGAATAGG+AGG - chr3.4:39589023-39589042 MS.gene22233:intron 35.0%
! ACGATTTCCATAACCGATTT+CGG - chr3.4:39586026-39586045 MS.gene22233:CDS 35.0%
! CATACATCTAGAGTGGTATT+GGG - chr3.4:39587097-39587116 MS.gene22233:CDS 35.0%
! CTTGGAATTTAAAATGAGGG+TGG - chr3.4:39588789-39588808 MS.gene22233:intron 35.0%
! GATGGTAAAGGTGCAATTAA+AGG + chr3.4:39589302-39589321 None:intergenic 35.0%
! GGTTAAATTTTTCATCCGGA+TGG + chr3.4:39590871-39590890 None:intergenic 35.0%
! TAAGTTTGGAGCTAGACTTA+AGG + chr3.4:39590275-39590294 None:intergenic 35.0%
! TTTCACAAAAGGTTAGTCCT+TGG - chr3.4:39591080-39591099 MS.gene22233:CDS 35.0%
!! TGATCTTTATATTGGCTCCT+TGG - chr3.4:39590323-39590342 MS.gene22233:intron 35.0%
!! TTTTCAAGAATTCTCCCTTC+TGG - chr3.4:39590004-39590023 MS.gene22233:intron 35.0%
!!! ATTTTAGTCCTTTGAAGCTC+AGG + chr3.4:39588596-39588615 None:intergenic 35.0%
!!! CCTTTTTAACTTATGCTCCA+AGG + chr3.4:39588318-39588337 None:intergenic 35.0%
!!! TGGAAGTGTTCTGATGTTTT+TGG - chr3.4:39591055-39591074 MS.gene22233:CDS 35.0%
!!! TGTTATGCAGTTGGTTTTGT+TGG - chr3.4:39588682-39588701 MS.gene22233:intron 35.0%
AAGACAAACATTGGAAGAGG+AGG - chr3.4:39590764-39590783 MS.gene22233:intron 40.0%
AAGAGTGGATGGGATGAATA+CGG - chr3.4:39590581-39590600 MS.gene22233:intron 40.0%
AATGCTCTACCAGTTGTGAA+GGG - chr3.4:39590893-39590912 MS.gene22233:CDS 40.0%
ACATGTTGTGGAATATGAGG+CGG + chr3.4:39585973-39585992 None:intergenic 40.0%
ACCATCTTATGGAAGAGGAA+GGG - chr3.4:39589316-39589335 MS.gene22233:intron 40.0%
AGCTCATTCATGAACTATGG+TGG - chr3.4:39588569-39588588 MS.gene22233:intron 40.0%
ATATAAATGTGAGGACGTGC+AGG + chr3.4:39587347-39587366 None:intergenic 40.0%
ATCAACAGGAGATGATCTTG+TGG - chr3.4:39590553-39590572 MS.gene22233:intron 40.0%
ATCGGTTATGGAAATCGTGT+CGG + chr3.4:39586024-39586043 None:intergenic 40.0%
ATGACTCTTTATCTTGCTGC+TGG - chr3.4:39586194-39586213 MS.gene22233:CDS 40.0%
CAAAGGACTAAAATCAGTGG+TGG - chr3.4:39588602-39588621 MS.gene22233:intron 40.0%
CAACAACATTGCTGCAATGA+AGG + chr3.4:39590169-39590188 None:intergenic 40.0%
CAACTTAGAACCATACTCAC+TGG + chr3.4:39589457-39589476 None:intergenic 40.0%
CACATCAACCTCTTCAACAT+GGG - chr3.4:39590725-39590744 MS.gene22233:intron 40.0%
CAGCAAAATGTGACGAAATG+TGG - chr3.4:39589521-39589540 MS.gene22233:intron 40.0%
CAGTTTCACAACCACTATTG+TGG + chr3.4:39589571-39589590 None:intergenic 40.0%
CATTCAGGGCAGCTATTTAT+AGG - chr3.4:39586084-39586103 MS.gene22233:CDS 40.0%
CCAATACCACTCTAGATGTA+TGG + chr3.4:39587099-39587118 None:intergenic 40.0%
CCTCTTCCATAAGATGGTAA+AGG + chr3.4:39589314-39589333 None:intergenic 40.0%
CCTTTACCATCTTATGGAAG+AGG - chr3.4:39589311-39589330 MS.gene22233:intron 40.0%
CTAGATCCATACATCTAGAG+TGG - chr3.4:39587090-39587109 MS.gene22233:CDS 40.0%
GAATAATTGGTACAAGACCC+AGG + chr3.4:39591133-39591152 None:intergenic 40.0%
GCTCATTCATGAACTATGGT+GGG - chr3.4:39588570-39588589 MS.gene22233:intron 40.0%
GGAACATGTTGTGGAATATG+AGG + chr3.4:39585976-39585995 None:intergenic 40.0%
GGAATTGACCCAGGTAAATA+CGG - chr3.4:39590236-39590255 MS.gene22233:intron 40.0%
GGAGAGTGGTAACAAGTTTA+AGG - chr3.4:39586905-39586924 MS.gene22233:intron 40.0%
GGGAGAAGAAAATAAGGAAG+AGG + chr3.4:39585935-39585954 None:intergenic 40.0%
GGTGAGAATGGAACAATTGA+TGG - chr3.4:39589874-39589893 MS.gene22233:intron 40.0%
TAATGCTCTACCAGTTGTGA+AGG - chr3.4:39590892-39590911 MS.gene22233:CDS 40.0%
TACCATCTTATGGAAGAGGA+AGG - chr3.4:39589315-39589334 MS.gene22233:intron 40.0%
TCATATCTCACCAGTGAGTA+TGG - chr3.4:39589444-39589463 MS.gene22233:intron 40.0%
TGCTGTTATTAAAGCCACAC+AGG - chr3.4:39586217-39586236 MS.gene22233:CDS 40.0%
TTCAAAGTCAGATGCAAAGG+AGG + chr3.4:39587430-39587449 None:intergenic 40.0%
TTGTGTTTCACCTGGTAAAG+TGG - chr3.4:39586391-39586410 MS.gene22233:CDS 40.0%
! AATGGAACAATTGATGGGCA+AGG - chr3.4:39589880-39589899 MS.gene22233:intron 40.0%
! ATTTCCATAACCGATTTCGG+CGG - chr3.4:39586029-39586048 MS.gene22233:CDS 40.0%
! CCATACATCTAGAGTGGTAT+TGG - chr3.4:39587096-39587115 MS.gene22233:CDS 40.0%
! TCACAACTGGTAGAGCATTA+GGG + chr3.4:39590892-39590911 None:intergenic 40.0%
! TTCACAACTGGTAGAGCATT+AGG + chr3.4:39590893-39590912 None:intergenic 40.0%
!! ATAAGTTTTATCCACGGCGA+TGG - chr3.4:39589359-39589378 MS.gene22233:intron 40.0%
!! ATGGTTCTAAGTTGTGGATC+TGG - chr3.4:39589463-39589482 MS.gene22233:intron 40.0%
!! CATGTTAACTTGTGCCCTAA+GGG + chr3.4:39588457-39588476 None:intergenic 40.0%
!! GAAATGTTAACTTGTGCCCT+TGG - chr3.4:39588298-39588317 MS.gene22233:intron 40.0%
!! GACTACAGATAATGGGTTGT+CGG - chr3.4:39588542-39588561 MS.gene22233:intron 40.0%
!! GTGAGTATGGTTCTAAGTTG+TGG - chr3.4:39589457-39589476 MS.gene22233:intron 40.0%
!! GTTGAACTCAAAGGCATTCA+GGG - chr3.4:39586070-39586089 MS.gene22233:CDS 40.0%
!! TCATGTTAACTTGTGCCCTA+AGG + chr3.4:39588458-39588477 None:intergenic 40.0%
!! TTGCAAGCTGGTTTGATACA+TGG - chr3.4:39590950-39590969 MS.gene22233:CDS 40.0%
AACACTGATGGAATTGACCC+AGG - chr3.4:39590227-39590246 MS.gene22233:intron 45.0%
AACCTCTTCAACATGGGAGT+TGG - chr3.4:39590731-39590750 MS.gene22233:intron 45.0%
AAGGAAGAGGAGGAAAGTTG+AGG + chr3.4:39585922-39585941 None:intergenic 45.0%
ACATCAGAACACTTCCAAGG+TGG + chr3.4:39591052-39591071 None:intergenic 45.0%
AGGAAGAGGAGGAAAGTTGA+GGG + chr3.4:39585921-39585940 None:intergenic 45.0%
AGGACTAAAATCAGTGGTGG+TGG - chr3.4:39588605-39588624 MS.gene22233:intron 45.0%
AGGCGGAGATAGAAGAGAAA+TGG + chr3.4:39585956-39585975 None:intergenic 45.0%
ATCAACCTTCATGGTGAGAC+AGG - chr3.4:39591013-39591032 MS.gene22233:CDS 45.0%
ATCACGATCCGACGTATAAC+CGG - chr3.4:39590632-39590651 MS.gene22233:intron 45.0%
ATTCAGCACTTAAGGAGACG+TGG - chr3.4:39586107-39586126 MS.gene22233:CDS 45.0%
GAGGACTCGTACATATCAAC+AGG - chr3.4:39590539-39590558 MS.gene22233:intron 45.0%
GCACATCAACCTCTTCAACA+TGG - chr3.4:39590724-39590743 MS.gene22233:intron 45.0%
GCGATGTAATCATCACAGGT+AGG - chr3.4:39589387-39589406 MS.gene22233:intron 45.0%
GGACTAAAATCAGTGGTGGT+GGG - chr3.4:39588606-39588625 MS.gene22233:intron 45.0%
GGCGGAGATAGAAGAGAAAT+GGG + chr3.4:39585955-39585974 None:intergenic 45.0%
GGGTCAATTCCATCAGTGTT+AGG + chr3.4:39590227-39590246 None:intergenic 45.0%
GTGATAAGGACCACTTTACC+AGG + chr3.4:39586404-39586423 None:intergenic 45.0%
GTGGTTGTGAAACTGTTGTG+CGG - chr3.4:39589576-39589595 MS.gene22233:intron 45.0%
GTTCGCGATGTAATCATCAC+AGG - chr3.4:39589383-39589402 MS.gene22233:intron 45.0%
TACCAACTCCCATGTTGAAG+AGG + chr3.4:39590736-39590755 None:intergenic 45.0%
TATTGTGGCCGATACTACTG+TGG + chr3.4:39589556-39589575 None:intergenic 45.0%
TCCCTTCCTCTTCCATAAGA+TGG + chr3.4:39589320-39589339 None:intergenic 45.0%
TCTGCATGGTTGCATGTGAA+TGG - chr3.4:39588635-39588654 MS.gene22233:intron 45.0%
! AAAAGCAGGAGATTCGGTCT+TGG + chr3.4:39587680-39587699 None:intergenic 45.0%
! AAAGCAGGAGATTCGGTCTT+GGG + chr3.4:39587679-39587698 None:intergenic 45.0%
! ATGTATGGTGGAACATGTGG+AGG - chr3.4:39589905-39589924 MS.gene22233:intron 45.0%
! CTAGAGTGGTATTGGGAATG+CGG - chr3.4:39587104-39587123 MS.gene22233:CDS 45.0%
! GAGATGTATGGTGGAACATG+TGG - chr3.4:39589902-39589921 MS.gene22233:intron 45.0%
! TTGATGGGCAAGGAGATGTA+TGG - chr3.4:39589890-39589909 MS.gene22233:intron 45.0%
!! AGTAGTATCGGCCACAATAG+TGG - chr3.4:39589557-39589576 MS.gene22233:intron 45.0%
!! CGTTGAACTCAAAGGCATTC+AGG - chr3.4:39586069-39586088 MS.gene22233:CDS 45.0%
!! CTCCTTAACTTGTGCCCTTA+GGG - chr3.4:39588440-39588459 MS.gene22233:intron 45.0%
!! GTTGAAGAGGTTGATGTGCT+CGG + chr3.4:39590723-39590742 None:intergenic 45.0%
!! TAAGAGTGTTTGGGGTGTGA+AGG - chr3.4:39590925-39590944 MS.gene22233:CDS 45.0%
!! AATAAATTACTTTAAATTAT+GGG + chr3.4:39587210-39587229 None:intergenic 5.0%
ATAATGTATTCCAGCGGGCC+AGG + chr3.4:39587500-39587519 None:intergenic 50.0%
ATGGGCAAGGAGATGTATGG+TGG - chr3.4:39589893-39589912 MS.gene22233:intron 50.0%
CACTATGCCGGAACATGTTG+TGG + chr3.4:39585985-39586004 None:intergenic 50.0%
CGGCAGAACGTTGAACTCAA+AGG - chr3.4:39586061-39586080 MS.gene22233:CDS 50.0%
CTCTCCGTTAAGTACACACC+AGG + chr3.4:39586155-39586174 None:intergenic 50.0%
CTGATCCTGTCTCACCATGA+AGG + chr3.4:39591021-39591040 None:intergenic 50.0%
CTTCATGGTGAGACAGGATC+AGG - chr3.4:39591019-39591038 MS.gene22233:CDS 50.0%
GAGACGATCCGGTTATACGT+CGG + chr3.4:39590643-39590662 None:intergenic 50.0%
GATCAGGTAGATCTCCACCT+TGG - chr3.4:39591035-39591054 MS.gene22233:CDS 50.0%
GATCTTGTGGCTGTGAAGAG+TGG - chr3.4:39590566-39590585 MS.gene22233:intron 50.0%
GCCTCCTGGTGTGTACTTAA+CGG - chr3.4:39586148-39586167 MS.gene22233:CDS 50.0%
GCCTGATGTTTCACTGCCTA+CGG + chr3.4:39590681-39590700 None:intergenic 50.0%
GGAAGAGGAGGAAAGTTGAG+GGG + chr3.4:39585920-39585939 None:intergenic 50.0%
GTAGGCAGTGAAACATCAGG+CGG - chr3.4:39590680-39590699 MS.gene22233:intron 50.0%
GTGACGAAATGTGGCTGATG+CGG - chr3.4:39589530-39589549 MS.gene22233:intron 50.0%
TCCGTTAAGTACACACCAGG+AGG + chr3.4:39586152-39586171 None:intergenic 50.0%
TCGTGATGCCATTGCTAGGA+CGG + chr3.4:39590619-39590638 None:intergenic 50.0%
TGATGCGGCCACAGTAGTAT+CGG - chr3.4:39589545-39589564 MS.gene22233:intron 50.0%
TGTGGCTGTGAAGAGTGGAT+GGG - chr3.4:39590571-39590590 MS.gene22233:intron 50.0%
TTATTTATGTCCTGGCCCGC+TGG - chr3.4:39587487-39587506 MS.gene22233:intron 50.0%
TTGTGGCTGTGAAGAGTGGA+TGG - chr3.4:39590570-39590589 MS.gene22233:intron 50.0%
! ACACACCAGGAGGCACATAA+AGG + chr3.4:39586142-39586161 None:intergenic 50.0%
! ATAACCGATTTCGGCGGTGT+CGG - chr3.4:39586035-39586054 MS.gene22233:CDS 50.0%
! GGTGTGAAGGTTTTGCAAGC+TGG - chr3.4:39590938-39590957 MS.gene22233:CDS 50.0%
! TGCCCTAAGGGCACAAGTTA+AGG + chr3.4:39588445-39588464 None:intergenic 50.0%
! TGGTGATGTAGGTGACCATC+CGG - chr3.4:39590853-39590872 MS.gene22233:CDS 50.0%
! TTATGGAAATCGTGTCGGCG+CGG + chr3.4:39586019-39586038 None:intergenic 50.0%
!! AAATCAGTGGTGGTGGGTCT+TGG - chr3.4:39588612-39588631 MS.gene22233:intron 50.0%
!! GCTCCTTAACTTGTGCCCTT+AGG - chr3.4:39588439-39588458 MS.gene22233:intron 50.0%
ACCGGATCGTCTCCATTTGC+CGG - chr3.4:39590650-39590669 MS.gene22233:intron 55.0%
ACGCTCCTTTATGTGCCTCC+TGG - chr3.4:39586134-39586153 MS.gene22233:CDS 55.0%
CAGCACTTAAGGAGACGTGG+TGG - chr3.4:39586110-39586129 MS.gene22233:CDS 55.0%
CGCGACTCTCCTAACACTGA+TGG - chr3.4:39590215-39590234 MS.gene22233:intron 55.0%
CGGATCGTGATGCCATTGCT+AGG + chr3.4:39590623-39590642 None:intergenic 55.0%
CTCAGCTGAGAACATGGCCA+AGG + chr3.4:39591100-39591119 None:intergenic 55.0%
GACACCGCCGAAATCGGTTA+TGG + chr3.4:39586036-39586055 None:intergenic 55.0%
GAGGAGGAAAGTTGAGGGGA+TGG + chr3.4:39585916-39585935 None:intergenic 55.0%
GCCGTAGGCAGTGAAACATC+AGG - chr3.4:39590677-39590696 MS.gene22233:intron 55.0%
TCAGTGTTAGGAGAGTCGCG+AGG + chr3.4:39590215-39590234 None:intergenic 55.0%
TCATACGGCCGTCCTAGCAA+TGG - chr3.4:39590608-39590627 MS.gene22233:intron 55.0%
TGCATCCCCTGAGATGAACG+TGG + chr3.4:39587324-39587343 None:intergenic 55.0%
TGGCTGCTCAGCTGAGAACA+TGG + chr3.4:39591106-39591125 None:intergenic 55.0%
TGGTACAAGACCCAGGCTCT+TGG + chr3.4:39591126-39591145 None:intergenic 55.0%
TTCACTGCCTACGGCAATGC+CGG + chr3.4:39590672-39590691 None:intergenic 55.0%
!! ATGGTGGGCCTGAGCTTCAA+AGG - chr3.4:39588585-39588604 MS.gene22233:intron 55.0%
AGCTGAGCAGCCAAGAGCCT+GGG - chr3.4:39591113-39591132 MS.gene22233:CDS 60.0%
CCATTTGCCGGCATTGCCGT+AGG - chr3.4:39590662-39590681 MS.gene22233:intron 60.0%
CCTACGGCAATGCCGGCAAA+TGG + chr3.4:39590665-39590684 None:intergenic 60.0%
CGGAGCCACGTTCATCTCAG+GGG - chr3.4:39587316-39587335 MS.gene22233:intron 60.0%
GCCGGCAAATGGAGACGATC+CGG + chr3.4:39590654-39590673 None:intergenic 60.0%
GCGGAGCCACGTTCATCTCA+GGG - chr3.4:39587315-39587334 MS.gene22233:intron 60.0%
GTGTCGGAACGGCACTATGC+CGG + chr3.4:39585997-39586016 None:intergenic 60.0%
! AAATCGTGTCGGCGCGGTGT+CGG + chr3.4:39586013-39586032 None:intergenic 60.0%
!! GTGGTGGGTCTTGGTCTGCA+TGG - chr3.4:39588621-39588640 MS.gene22233:intron 60.0%
AGAGGAAGGGAGCTCCCAGG+AGG - chr3.4:39589329-39589348 MS.gene22233:intron 65.0%
CAGCTGAGCAGCCAAGAGCC+TGG - chr3.4:39591112-39591131 MS.gene22233:CDS 65.0%
CATCGCGAACTCCATCGCCG+TGG + chr3.4:39589373-39589392 None:intergenic 65.0%
GAAGGGAGCTCCCAGGAGGA+AGG - chr3.4:39589333-39589352 MS.gene22233:intron 65.0%
GGAAGAGGAAGGGAGCTCCC+AGG - chr3.4:39589326-39589345 MS.gene22233:intron 65.0%
GGCGGAGCCACGTTCATCTC+AGG - chr3.4:39587314-39587333 MS.gene22233:intron 65.0%
GTCGCCGACACCGCCGAAAT+CGG + chr3.4:39586042-39586061 None:intergenic 65.0%
!! GATTTCGGCGGTGTCGGCGA+CGG - chr3.4:39586041-39586060 MS.gene22233:CDS 65.0%
! GTGTCGGCGCGGTGTCGGAA+CGG + chr3.4:39586008-39586027 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 39585891 39591156 39585891 ID=MS.gene22233
chr3.4 mRNA 39585891 39591156 39585891 ID=MS.gene22233.t1;Parent=MS.gene22233
chr3.4 exon 39590809 39591156 39590809 ID=MS.gene22233.t1.exon1;Parent=MS.gene22233.t1
chr3.4 CDS 39590809 39591156 39590809 ID=cds.MS.gene22233.t1;Parent=MS.gene22233.t1
chr3.4 exon 39587643 39587763 39587643 ID=MS.gene22233.t1.exon2;Parent=MS.gene22233.t1
chr3.4 CDS 39587643 39587763 39587643 ID=cds.MS.gene22233.t1;Parent=MS.gene22233.t1
chr3.4 exon 39586998 39587172 39586998 ID=MS.gene22233.t1.exon3;Parent=MS.gene22233.t1
chr3.4 CDS 39586998 39587172 39586998 ID=cds.MS.gene22233.t1;Parent=MS.gene22233.t1
chr3.4 exon 39586799 39586869 39586799 ID=MS.gene22233.t1.exon4;Parent=MS.gene22233.t1
chr3.4 CDS 39586799 39586869 39586799 ID=cds.MS.gene22233.t1;Parent=MS.gene22233.t1
chr3.4 exon 39585891 39586531 39585891 ID=MS.gene22233.t1.exon5;Parent=MS.gene22233.t1
chr3.4 CDS 39585891 39586531 39585891 ID=cds.MS.gene22233.t1;Parent=MS.gene22233.t1
Gene Sequence

>MS.gene22233

ATGCATCTTCTCTCAAAAACTTCCATCCCCTCAACTTTCCTCCTCTTCCTTATTTTCTTCTCCCATTTCTCTTCTATCTCCGCCTCATATTCCACAACATGTTCCGGCATAGTGCCGTTCCGACACCGCGCCGACACGATTTCCATAACCGATTTCGGCGGTGTCGGCGACGGCAGAACGTTGAACTCAAAGGCATTCAGGGCAGCTATTTATAGGATTCAGCACTTAAGGAGACGTGGTGGCACGCTCCTTTATGTGCCTCCTGGTGTGTACTTAACGGAGAGCTTCAATCTCACTAGTCATATGACTCTTTATCTTGCTGCTGGTGCTGTTATTAAAGCCACACAGGTTTATTGCTATTTTCATTCTTTGCTTTTTTCTTATTAATCCCCTTTTTTTTTTTGTTCTAATTTAGCAGTATTAATGTTCTTTCAATTAGCGATGTCGATATTGTTAAGCTAGACATCTTCAACCTATTTCAAGCTCAACTTTACAATTGTTTGTGTTTCACCTGGTAAAGTGGTCCTTATCACATGAAACAAACATAATTTTGTTTTTTGGTTACAGAAATTATGTGAATTAACTTCTAGCTTTTCAAAAAATGATATTTAGTATTGTTTTCTAATAGGACCTTGTTATATGAAAAAAAAATTAGGTTCATTGAATAACTAATATTTATGGTCACTATTATGAACAAATATTAATTTTTTTTAGATTTATCGAAAAGTTGATGTATCTAGTTTATAATATAATTTAGATATATATATGTTGTTCAATGAATCTGAACAAAATATTTACTTATTATAGTGGGAAGAGGAAGTAATGTTTATTACAGATTGCAGAAAAAATATTTAATATGATTAAAGATGGGTTAATAAAGAAATAATTAACATGAAAATTTGTAAGGAATTCTATGAAAAGATGCAAGAAATTTTTTCAAGAGTATTCAATATTCTTTGAGTATAAATAAATGATCGAGGAGCTTGTACCACACAAATTAAATAATTTGTCTAGGGAGAGTGGTAACAAGTTTAAGGAATTAAAATGAGAAATCTTTTATAAAAAATGTTGTAATGATTCCTTAAACAATAATTTGACTTTTATTTTTAAGATAGATTTTTATTGTTCATTCCTTAAAGAATGTACTTTTTTTATTTTTAATTTTAACAATGTACTTGTTAGTATATGATATTATTTTTCTAGATCCATACATCTAGAGTGGTATTGGGAATGCGGAAAATCGACCCCCATTATAATATATATAATAGGTGTTCTGCTTAAAATCTCATTCCCCATCTTATATAAACTATTCACAACCCATAATTTAAAGTAATTTATTGAAAACAATAGGAAAGAATGCAAAGCTCTAAGTTATGTATGTGTATCATTAATTGAGTTAATTGGTATGTGTGTTATATATAGTGGCGGAGCCACGTTCATCTCAGGGGATGCACCTGCACGTCCTCACATTTATATTTTTGCACCTACTATACTATTGTATTTCTATGTTGAATCCCCTCAGTTTTTTGTTTTGCACCTCCTTTGCATCTGACTTTGAAATCTCTTCATAGAGCACGTCTTTTTTTTTTATTCGATTTATTTATGTCCTGGCCCGCTGGAATACATTATTATTTATTACTGATGCAGTTCAGCTTTTCTTGTTGACTATATTTACCTCTTATTATTATATTACAGTTAGTTACCTCTTCAAAAATTAATTATTTAATATTTATTTCCATTTTCCATTTTTTATAAATTTAAAAAATTGGGAACATGTAGATCAATCCCAAGACCGAATCTCCTGCTTTTGAATTAACGAGATATACTACGAAGTCTGTACGAATCATATTGTTTGATGCACGCAAGTGTTAATGTATGACTCATATTTCATAAGAAAAAATTCTTATACCAATTTCATTTTTATTACCTGGTTAATAAACTTTTTCTTTTCTAAATTATTGATGATAATACTTTACTATATTATTGATGATATTACAAATGGTAAATATTAGAATTTACGGTTAGTGTAAGAAATTTACAAACTTTATATGTTAATATAACTAGTCTTTTATGTCATGACGAATATGTTGCGTAATCAAATGAAGACAACAAATGACCGATTATCTCATGACTTATATTAAGAGATGTGTTCGATAACATGGATAATAAGTTGATTATTCAACGATTTCATAAGATGAAACGGCGTAATGAAAATTGTAGAATATGTTTGTTATTTTGATTACAATTTATTTTTTGTATACATATTATTTATTATTTATATAATATAATAAATAACATTTTCCCATAAAAATTATGATTTTTTGCACCAAAAAAGATTTGTTTTGATTTCAAAAATTATATTTTGTTTTAAGATTCAACGTTGAAACAATAAATTATATTTTGATGGGAAATGTTAACTTGTGCCCTTGGAGCATAAGTTAAAAAGGCTAAATGTAGAAATTTTTTTTTGAAAATTGTGCATTCAATGCATTAAAAGTTTTAAAAGTTGTATTTATAATATAAAAGTTGCTTTGACTTTCCATTTTAAGCTCCTTAACTTGTGCCCTTAGGGCACAAGTTAACATGACACTATTTTGATTCTTCGCTTGAAGAAAAATATGCTCCTTTAAATAATGTATGGTCAAAAATAAGACTACAGATAATGGGTTGTCGGAAACAGCTCATTCATGAACTATGGTGGGCCTGAGCTTCAAAGGACTAAAATCAGTGGTGGTGGGTCTTGGTCTGCATGGTTGCATGTGAATGGTATTCACAGCATTAACAATTTCCATGTTATGCAGTTGGTTTTGTTGGCCATTATTGATGTACTCTTCTATTATCAAGTTGAATTTGGATATTGCTTTATTTTGCTAGTGATTTTACCATGTAAATATGACTCTTGGAATTTAAAATGAGGGTGGAATTTAAAATTCATTGTTTAACTTACTTAAGAATTATAGGTTTACATTTGATGAATCATAAAAATAATTGTAACATATTTTTTGGTTCAAATTAGCAATATCACATAATCAAATGTAATTCTACATCATTAATAAAAATGACATGTCACAAAAAATAAGCCCAAATAGAATTGTTGAGAAAAACCATAAAACTTGTGAAACTCTAGACTAAAATCCCATATTTGGAATAGGAGGACTAAAAATTAAAATACTCTTTCAGTTAAAATAGTGAGATAAACATTGTATCTAAGCCTAATTTTTGTGTGGATTTAAATGTGATTGGAGGAATTATGTGTTGTGACCATTATTTGGTAGTGTAATGTTGATACTTAATCTCAAGTGAATGTTCAAAGTTTAATGGCAATCATCAAAATATCTCTGCTCTTTCTATGTGTTGCTCTTTCTTAATGTTCTTCCTTTCTTCATTCTTTAGAGGTTATGGAATTGGCCTTTAATTGCACCTTTACCATCTTATGGAAGAGGAAGGGAGCTCCCAGGAGGAAGGTATATAAGTTTTATCCACGGCGATGGAGTTCGCGATGTAATCATCACAGGTAGGTACAAATAAATTAGTACTCACTTGATTTTCTAGTTCATATCTCACCAGTGAGTATGGTTCTAAGTTGTGGATCTGGTCGCATGTGTAGTTATATTGCAAACTTTAATATTGCAGCAAAATGTGACGAAATGTGGCTGATGCGGCCACAGTAGTATCGGCCACAATAGTGGTTGTGAAACTGTTGTGCGGACTTCTAAAACCTTAATATAACGGCGGGAATTTAGAACTATGCCAAATAGCATCTAAAATTAGTACATAATACCCAAATATACTAAAATGAATCTAAAATGTTTATTGGGTGTAACCAAAACAAGAAAATTGCATGCTGAAAAAGATGTATACTATATAGCCATAATTGATTCAATGTTCTGTTTTCATTTTTTTATTATTCACCTATAAAATTAAAACCAAGCTTACCAATCTTTGAAATCTAATCTCTCTCCTCCTTCACTCTTATTTTTATAGGTGAGAATGGAACAATTGATGGGCAAGGAGATGTATGGTGGAACATGTGGAGGCAGAGAACTCTTCAATTTACAAGACCAAACCTTGTTGAATTTTTGAATTCAAGAAATATTATTATTTCAAATGTTATTTTCAAGAATTCTCCCTTCTGGAATATACATCCAGTTTACTGCAGGTAAAAATTTGATGTATGGATAAATTTTTTTGACATCATTTTCATGATAAAAAAAAAAACAAAAATGCATCATAGGGATAGAGGTCTTTTCCTAAAATGTAATTCAAAACTTTTTTCCTTCATTGCAGCAATGTTGTTGTTCGATATGTCACGATTTTGGCTCCTCGCGACTCTCCTAACACTGATGGAATTGACCCAGGTAAATACGGATATAACTTTCTTCCTTAAGTCTAGCTCCAAACTTATTAATGTTGATTCCATAACTTAGATAAATGATCTTTATATTGGCTCCTTGGTTTACTATATATATTAAGTTCTGTTTGGCTTGACTTATTTTTAACTTATTGTCTCCTTAAAAGAAGAAGTTAGGACAAACAATATTTTTAAGAAAGTAGTTTAGAGGAGTTTTCCAAATAAAGCAAACATTTGTAATGAATCATATGTAAAATATAATTCATTTATGCAGATTCAAGTTCAAATGTCTGCATAGAGGACTCGTACATATCAACAGGAGATGATCTTGTGGCTGTGAAGAGTGGATGGGATGAATACGGTATTTCATACGGCCGTCCTAGCAATGGCATCACGATCCGACGTATAACCGGATCGTCTCCATTTGCCGGCATTGCCGTAGGCAGTGAAACATCAGGCGGAGTACAGAATGTACTAGCCGAGCACATCAACCTCTTCAACATGGGAGTTGGTATCCACATTAAGACAAACATTGGAAGAGGAGGACTTATCAAGAATATAACAGTATCTAATGTGTATATAGAAAATTCAAGGCAAGGAATAAAAATTGCTGGTGATGTAGGTGACCATCCGGATGAAAAATTTAACCCTAATGCTCTACCAGTTGTGAAGGGAATTACAATTAAGAGTGTTTGGGGTGTGAAGGTTTTGCAAGCTGGTTTGATACATGGTTTGAGAAATTCACCTTTTACTGAGATTTGTTTCTATGATATCAACCTTCATGGTGAGACAGGATCAGGTAGATCTCCACCTTGGAAGTGTTCTGATGTTTTTGGATTTTCACAAAAGGTTAGTCCTTGGCCATGTTCTCAGCTGAGCAGCCAAGAGCCTGGGTCTTGTACCAATTATTCATGA
Protein sequence

>MS.gene22233.t1

MHLLSKTSIPSTFLLFLIFFSHFSSISASYSTTCSGIVPFRHRADTISITDFGGVGDGRTLNSKAFRAAIYRIQHLRRRGGTLLYVPPGVYLTESFNLTSHMTLYLAAGAVIKATQRLWNWPLIAPLPSYGRGRELPGGRYISFIHGDGVRDVIITGENGTIDGQGDVWWNMWRQRTLQFTRPNLVEFLNSRNIIISNVIFKNSPFWNIHPVYCSNVVVRYVTILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGISYGRPSNGITIRRITGSSPFAGIAVGSETSGGVQNVLAEHINLFNMGVGIHIKTNIGRGGLIKNITVSNVYIENSRQGIKIAGDVGDHPDEKFNPNALPVVKGITIKSVWGVKVLQAGLIHGLRNSPFTEICFYDINLHGETGSGRSPPWKCSDVFGFSQKVSPWPCSQLSSQEPGSCTNYS