Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46962.t1 | XP_013459604.1 | 99 | 382 | 4 | 0 | 1 | 382 | 1 | 382 | 1.40E-217 | 765.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46962.t1 | A7PZL3 | 52.8 | 337 | 158 | 1 | 43 | 378 | 59 | 395 | 4.9e-99 | 362.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46962.t1 | A0A072V631 | 99.0 | 382 | 4 | 0 | 1 | 382 | 1 | 382 | 9.8e-218 | 765.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050767 | MS.gene46962 | 0.819008 | 1.45E-52 | -1.69E-46 |
| MS.gene050770 | MS.gene46962 | 0.817162 | 3.80E-52 | -1.69E-46 |
| MS.gene053009 | MS.gene46962 | 0.806284 | 8.87E-50 | -1.69E-46 |
| MS.gene054376 | MS.gene46962 | 0.825522 | 4.48E-54 | -1.69E-46 |
| MS.gene055254 | MS.gene46962 | 0.803776 | 2.97E-49 | -1.69E-46 |
| MS.gene059711 | MS.gene46962 | 0.802369 | 5.80E-49 | -1.69E-46 |
| MS.gene061200 | MS.gene46962 | 0.81826 | 2.15E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene78336 | MS.gene46962 | PPI |
| MS.gene072441 | MS.gene46962 | PPI |
| MS.gene019627 | MS.gene46962 | PPI |
| MS.gene46962 | MS.gene071826 | PPI |
| MS.gene019625 | MS.gene46962 | PPI |
| MS.gene46962 | MS.gene36228 | PPI |
| MS.gene46962 | MS.gene056777 | PPI |
| MS.gene63570 | MS.gene46962 | PPI |
| MS.gene46962 | MS.gene069198 | PPI |
| MS.gene46962 | MS.gene069200 | PPI |
| MS.gene46962 | MS.gene018971 | PPI |
| MS.gene29308 | MS.gene46962 | PPI |
| MS.gene46962 | MS.gene51014 | PPI |
| MS.gene46962 | MS.gene89048 | PPI |
| MS.gene46962 | MS.gene03618 | PPI |
| MS.gene071829 | MS.gene46962 | PPI |
| MS.gene46962 | MS.gene86370 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46962.t1 | MTR_3g449590 | 98.953 | 382 | 4 | 0 | 1 | 382 | 1 | 382 | 0.0 | 764 |
| MS.gene46962.t1 | MTR_5g090160 | 80.323 | 371 | 71 | 2 | 14 | 382 | 10 | 380 | 0.0 | 595 |
| MS.gene46962.t1 | MTR_7g110710 | 54.667 | 375 | 167 | 2 | 7 | 380 | 5 | 377 | 9.07e-142 | 412 |
| MS.gene46962.t1 | MTR_7g110710 | 54.667 | 375 | 167 | 2 | 7 | 380 | 5 | 377 | 1.03e-141 | 412 |
| MS.gene46962.t1 | MTR_1g086030 | 54.301 | 372 | 168 | 1 | 9 | 380 | 46 | 415 | 7.23e-137 | 401 |
| MS.gene46962.t1 | MTR_3g096330 | 49.631 | 407 | 176 | 5 | 1 | 381 | 8 | 411 | 7.11e-128 | 387 |
| MS.gene46962.t1 | MTR_8g098840 | 53.709 | 337 | 155 | 1 | 43 | 378 | 40 | 376 | 5.88e-125 | 369 |
| MS.gene46962.t1 | MTR_4g120730 | 49.419 | 344 | 173 | 1 | 40 | 382 | 33 | 376 | 1.08e-122 | 363 |
| MS.gene46962.t1 | MTR_2g435340 | 50.729 | 343 | 160 | 2 | 43 | 380 | 33 | 371 | 2.64e-122 | 362 |
| MS.gene46962.t1 | MTR_1g100060 | 52.522 | 337 | 159 | 1 | 43 | 378 | 89 | 425 | 4.05e-121 | 361 |
| MS.gene46962.t1 | MTR_7g078680 | 50.136 | 367 | 182 | 1 | 13 | 378 | 21 | 387 | 1.19e-120 | 359 |
| MS.gene46962.t1 | MTR_7g088550 | 53.254 | 338 | 156 | 2 | 43 | 378 | 46 | 383 | 1.72e-120 | 358 |
| MS.gene46962.t1 | MTR_4g124980 | 50.139 | 361 | 172 | 4 | 36 | 388 | 59 | 419 | 3.01e-120 | 358 |
| MS.gene46962.t1 | MTR_8g028725 | 52.023 | 346 | 163 | 2 | 43 | 387 | 51 | 394 | 9.34e-119 | 354 |
| MS.gene46962.t1 | MTR_1g100050 | 51.632 | 337 | 162 | 1 | 43 | 378 | 46 | 382 | 9.38e-118 | 351 |
| MS.gene46962.t1 | MTR_2g042740 | 51.765 | 340 | 162 | 2 | 43 | 380 | 52 | 391 | 4.05e-117 | 350 |
| MS.gene46962.t1 | MTR_1g086030 | 52.681 | 317 | 138 | 2 | 66 | 380 | 5 | 311 | 1.13e-113 | 338 |
| MS.gene46962.t1 | MTR_1g100040 | 47.790 | 362 | 183 | 2 | 23 | 378 | 27 | 388 | 1.20e-112 | 338 |
| MS.gene46962.t1 | MTR_1g099850 | 48.665 | 337 | 172 | 1 | 43 | 378 | 51 | 387 | 8.76e-111 | 333 |
| MS.gene46962.t1 | MTR_2g435340 | 49.624 | 266 | 125 | 2 | 120 | 380 | 45 | 306 | 2.63e-91 | 281 |
| MS.gene46962.t1 | MTR_2g083670 | 48.649 | 222 | 99 | 1 | 31 | 252 | 24 | 230 | 6.48e-63 | 202 |
| MS.gene46962.t1 | MTR_2g042750 | 44.444 | 162 | 60 | 5 | 80 | 238 | 148 | 282 | 4.42e-29 | 115 |
| MS.gene46962.t1 | MTR_6g005630 | 27.826 | 345 | 200 | 11 | 16 | 350 | 17 | 322 | 4.47e-27 | 112 |
| MS.gene46962.t1 | MTR_6g028080 | 27.568 | 370 | 214 | 13 | 37 | 389 | 20 | 352 | 1.56e-25 | 107 |
| MS.gene46962.t1 | MTR_3g084380 | 25.964 | 389 | 230 | 14 | 28 | 397 | 5 | 354 | 2.82e-24 | 103 |
| MS.gene46962.t1 | MTR_5g043350 | 27.222 | 360 | 207 | 10 | 12 | 364 | 6 | 317 | 7.38e-24 | 102 |
| MS.gene46962.t1 | MTR_4g084050 | 28.487 | 337 | 185 | 11 | 13 | 341 | 5 | 293 | 3.49e-23 | 100 |
| MS.gene46962.t1 | MTR_5g090140 | 47.500 | 120 | 38 | 3 | 260 | 378 | 1 | 96 | 3.93e-22 | 92.4 |
| MS.gene46962.t1 | MTR_3g084360 | 29.085 | 306 | 174 | 10 | 46 | 341 | 23 | 295 | 4.56e-22 | 97.4 |
| MS.gene46962.t1 | MTR_6g005630 | 25.849 | 383 | 218 | 14 | 16 | 378 | 17 | 353 | 1.70e-21 | 95.9 |
| MS.gene46962.t1 | MTR_8g010080 | 27.381 | 336 | 196 | 11 | 12 | 343 | 6 | 297 | 2.00e-21 | 95.5 |
| MS.gene46962.t1 | MTR_5g033680 | 27.044 | 318 | 186 | 9 | 39 | 341 | 51 | 337 | 2.43e-21 | 95.9 |
| MS.gene46962.t1 | MTR_3g054320 | 26.846 | 298 | 180 | 9 | 52 | 341 | 35 | 302 | 2.43e-20 | 92.4 |
| MS.gene46962.t1 | MTR_2g103410 | 28.182 | 330 | 189 | 10 | 47 | 361 | 59 | 355 | 9.89e-20 | 91.3 |
| MS.gene46962.t1 | MTR_6g048610 | 40.741 | 135 | 42 | 3 | 240 | 373 | 24 | 121 | 5.71e-19 | 84.0 |
| MS.gene46962.t1 | MTR_4g083660 | 29.305 | 331 | 184 | 13 | 44 | 365 | 6 | 295 | 1.23e-18 | 87.0 |
| MS.gene46962.t1 | MTR_7g091840 | 25.974 | 308 | 182 | 12 | 49 | 343 | 67 | 341 | 2.57e-18 | 86.3 |
| MS.gene46962.t1 | MTR_8g077320 | 31.481 | 216 | 129 | 6 | 140 | 350 | 97 | 298 | 2.82e-18 | 85.9 |
| MS.gene46962.t1 | MTR_3g030540 | 26.554 | 354 | 219 | 11 | 37 | 381 | 60 | 381 | 6.47e-18 | 85.5 |
| MS.gene46962.t1 | MTR_7g092470 | 25.890 | 309 | 189 | 8 | 46 | 341 | 47 | 328 | 8.02e-18 | 85.5 |
| MS.gene46962.t1 | MTR_4g094715 | 26.380 | 326 | 199 | 10 | 39 | 350 | 56 | 354 | 1.79e-17 | 84.3 |
| MS.gene46962.t1 | MTR_8g008765 | 26.623 | 308 | 186 | 9 | 48 | 350 | 32 | 304 | 1.89e-17 | 83.6 |
| MS.gene46962.t1 | MTR_2g103650 | 26.452 | 310 | 179 | 10 | 46 | 339 | 27 | 303 | 2.73e-17 | 83.6 |
| MS.gene46962.t1 | MTR_1g012390 | 26.380 | 326 | 202 | 12 | 33 | 350 | 16 | 311 | 2.76e-17 | 83.6 |
| MS.gene46962.t1 | MTR_1g086390 | 25.938 | 320 | 193 | 11 | 47 | 350 | 81 | 372 | 4.63e-17 | 83.2 |
| MS.gene46962.t1 | MTR_5g034090 | 25.146 | 342 | 183 | 13 | 48 | 350 | 122 | 429 | 8.61e-17 | 82.8 |
| MS.gene46962.t1 | MTR_2g060350 | 26.667 | 315 | 174 | 13 | 47 | 343 | 74 | 349 | 9.91e-17 | 82.0 |
| MS.gene46962.t1 | MTR_8g065010 | 25.075 | 335 | 179 | 11 | 46 | 341 | 106 | 407 | 1.51e-16 | 82.0 |
| MS.gene46962.t1 | MTR_1g052315 | 25.225 | 333 | 205 | 13 | 46 | 371 | 63 | 358 | 1.83e-16 | 81.3 |
| MS.gene46962.t1 | MTR_7g110050 | 25.868 | 317 | 192 | 9 | 49 | 350 | 69 | 357 | 2.35e-16 | 80.9 |
| MS.gene46962.t1 | MTR_1g088160 | 28.125 | 320 | 174 | 12 | 49 | 350 | 37 | 318 | 2.81e-16 | 80.5 |
| MS.gene46962.t1 | MTR_2g103410 | 27.586 | 290 | 164 | 9 | 47 | 323 | 59 | 315 | 4.35e-16 | 79.3 |
| MS.gene46962.t1 | MTR_8g010090 | 26.230 | 305 | 178 | 9 | 48 | 343 | 32 | 298 | 4.95e-16 | 79.7 |
| MS.gene46962.t1 | MTR_7g035415 | 25.672 | 335 | 208 | 10 | 34 | 361 | 27 | 327 | 9.28e-16 | 78.2 |
| MS.gene46962.t1 | MTR_8g009810 | 33.929 | 224 | 119 | 9 | 148 | 365 | 121 | 321 | 1.23e-15 | 78.6 |
| MS.gene46962.t1 | MTR_2g049400 | 26.885 | 305 | 187 | 9 | 44 | 343 | 25 | 298 | 1.45e-15 | 78.2 |
| MS.gene46962.t1 | MTR_8g008700 | 30.769 | 195 | 113 | 4 | 160 | 350 | 51 | 227 | 1.57e-15 | 77.0 |
| MS.gene46962.t1 | MTR_2g032710 | 27.941 | 204 | 122 | 5 | 160 | 350 | 165 | 356 | 1.88e-15 | 78.2 |
| MS.gene46962.t1 | MTR_8g065030 | 25.217 | 345 | 217 | 12 | 47 | 381 | 65 | 378 | 3.28e-15 | 77.4 |
| MS.gene46962.t1 | MTR_1g013740 | 28.477 | 302 | 172 | 13 | 45 | 341 | 33 | 295 | 8.31e-15 | 75.9 |
| MS.gene46962.t1 | MTR_5g034090 | 25.316 | 316 | 163 | 13 | 47 | 323 | 121 | 402 | 9.87e-15 | 75.9 |
| MS.gene46962.t1 | MTR_7g091850 | 24.675 | 308 | 188 | 12 | 47 | 343 | 76 | 350 | 3.34e-14 | 74.3 |
| MS.gene46962.t1 | MTR_8g010070 | 26.797 | 306 | 176 | 11 | 48 | 343 | 32 | 299 | 4.41e-14 | 73.6 |
| MS.gene46962.t1 | MTR_8g010050 | 25.733 | 307 | 170 | 10 | 49 | 345 | 33 | 291 | 5.99e-14 | 73.2 |
| MS.gene46962.t1 | MTR_8g010110 | 25.633 | 316 | 188 | 11 | 48 | 351 | 32 | 312 | 6.15e-14 | 73.2 |
| MS.gene46962.t1 | MTR_8g010040 | 26.948 | 308 | 182 | 10 | 43 | 343 | 28 | 299 | 1.38e-13 | 72.0 |
| MS.gene46962.t1 | MTR_1g013730 | 27.213 | 305 | 180 | 11 | 45 | 345 | 25 | 291 | 7.43e-13 | 70.1 |
| MS.gene46962.t1 | MTR_8g031180 | 35.065 | 154 | 84 | 3 | 201 | 350 | 71 | 212 | 9.00e-13 | 68.6 |
| MS.gene46962.t1 | MTR_4g120320 | 23.167 | 341 | 193 | 10 | 47 | 345 | 52 | 365 | 1.18e-12 | 69.3 |
| MS.gene46962.t1 | MTR_3g438050 | 26.148 | 283 | 175 | 9 | 45 | 323 | 25 | 277 | 1.23e-12 | 69.3 |
| MS.gene46962.t1 | MTR_2g435640 | 26.050 | 357 | 198 | 14 | 47 | 380 | 53 | 366 | 1.10e-11 | 66.6 |
| MS.gene46962.t1 | MTR_7g113910 | 29.630 | 189 | 100 | 5 | 160 | 343 | 97 | 257 | 2.35e-11 | 65.5 |
| MS.gene46962.t1 | MTR_0157s0060 | 27.984 | 243 | 141 | 7 | 168 | 397 | 106 | 327 | 2.45e-11 | 65.1 |
| MS.gene46962.t1 | MTR_4g034020 | 27.984 | 243 | 141 | 7 | 168 | 397 | 106 | 327 | 2.45e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46962.t1 | AT4G23820 | 79.189 | 370 | 76 | 1 | 12 | 381 | 7 | 375 | 0.0 | 623 |
| MS.gene46962.t1 | AT5G41870 | 71.850 | 373 | 104 | 1 | 11 | 382 | 9 | 381 | 0.0 | 548 |
| MS.gene46962.t1 | AT3G62110 | 54.348 | 368 | 166 | 2 | 14 | 380 | 11 | 377 | 2.83e-143 | 416 |
| MS.gene46962.t1 | AT3G62110 | 54.348 | 368 | 166 | 2 | 14 | 380 | 11 | 377 | 2.83e-143 | 416 |
| MS.gene46962.t1 | AT4G33440 | 57.143 | 350 | 145 | 3 | 33 | 378 | 56 | 404 | 1.72e-129 | 381 |
| MS.gene46962.t1 | AT3G48950 | 48.248 | 371 | 187 | 3 | 13 | 378 | 8 | 378 | 3.19e-121 | 360 |
| MS.gene46962.t1 | AT3G61490 | 49.451 | 364 | 179 | 3 | 17 | 378 | 17 | 377 | 2.30e-119 | 355 |
| MS.gene46962.t1 | AT3G61490 | 49.451 | 364 | 179 | 3 | 17 | 378 | 17 | 377 | 2.30e-119 | 355 |
| MS.gene46962.t1 | AT3G61490 | 49.451 | 364 | 179 | 3 | 17 | 378 | 17 | 377 | 2.30e-119 | 355 |
| MS.gene46962.t1 | AT3G61490 | 49.451 | 364 | 179 | 3 | 17 | 378 | 32 | 392 | 3.01e-119 | 356 |
| MS.gene46962.t1 | AT3G61490 | 49.451 | 364 | 179 | 3 | 17 | 378 | 130 | 490 | 1.48e-118 | 357 |
| MS.gene46962.t1 | AT3G16850 | 47.967 | 369 | 191 | 1 | 14 | 381 | 7 | 375 | 4.71e-118 | 351 |
| MS.gene46962.t1 | AT3G42950 | 49.862 | 363 | 179 | 3 | 20 | 380 | 40 | 401 | 1.21e-115 | 346 |
| MS.gene46962.t1 | AT4G23500 | 51.039 | 337 | 164 | 1 | 43 | 378 | 64 | 400 | 3.01e-115 | 345 |
| MS.gene46962.t1 | AT1G19170 | 49.858 | 353 | 172 | 4 | 41 | 388 | 81 | 433 | 3.43e-112 | 338 |
| MS.gene46962.t1 | AT2G23900 | 46.524 | 374 | 194 | 3 | 11 | 378 | 16 | 389 | 5.72e-112 | 337 |
| MS.gene46962.t1 | AT5G49215 | 47.384 | 344 | 172 | 2 | 42 | 380 | 36 | 375 | 2.38e-107 | 324 |
| MS.gene46962.t1 | AT5G49215 | 47.384 | 344 | 172 | 2 | 42 | 380 | 38 | 377 | 2.47e-107 | 324 |
| MS.gene46962.t1 | AT3G06770 | 46.647 | 343 | 174 | 2 | 43 | 380 | 40 | 378 | 4.15e-105 | 318 |
| MS.gene46962.t1 | AT3G06770 | 46.647 | 343 | 174 | 2 | 43 | 380 | 39 | 377 | 4.39e-105 | 318 |
| MS.gene46962.t1 | AT3G06770 | 46.254 | 307 | 156 | 2 | 79 | 380 | 6 | 308 | 4.19e-91 | 280 |
| MS.gene46962.t1 | AT3G06770 | 46.254 | 307 | 156 | 2 | 79 | 380 | 6 | 308 | 4.19e-91 | 280 |
| MS.gene46962.t1 | AT3G06770 | 43.985 | 266 | 140 | 2 | 120 | 380 | 29 | 290 | 1.45e-73 | 234 |
| MS.gene46962.t1 | AT2G41850 | 30.448 | 335 | 191 | 11 | 46 | 369 | 67 | 370 | 6.79e-28 | 114 |
| MS.gene46962.t1 | AT5G17200 | 31.068 | 309 | 173 | 10 | 47 | 350 | 39 | 312 | 6.38e-26 | 108 |
| MS.gene46962.t1 | AT3G15720 | 29.730 | 370 | 205 | 13 | 44 | 396 | 21 | 352 | 9.07e-26 | 108 |
| MS.gene46962.t1 | AT3G15720 | 29.730 | 370 | 205 | 13 | 44 | 396 | 20 | 351 | 1.04e-25 | 108 |
| MS.gene46962.t1 | AT5G14650 | 26.705 | 352 | 220 | 11 | 1 | 343 | 1 | 323 | 6.15e-24 | 103 |
| MS.gene46962.t1 | AT3G15720 | 29.730 | 370 | 202 | 14 | 44 | 396 | 20 | 348 | 9.97e-24 | 102 |
| MS.gene46962.t1 | AT3G57790 | 28.754 | 313 | 181 | 9 | 46 | 341 | 34 | 321 | 1.15e-23 | 103 |
| MS.gene46962.t1 | AT3G57790 | 28.754 | 313 | 181 | 9 | 46 | 341 | 34 | 321 | 1.15e-23 | 103 |
| MS.gene46962.t1 | AT3G57510 | 27.168 | 346 | 217 | 10 | 43 | 381 | 64 | 381 | 1.70e-22 | 99.4 |
| MS.gene46962.t1 | AT3G15720 | 31.142 | 289 | 157 | 10 | 123 | 396 | 27 | 288 | 3.62e-22 | 97.8 |
| MS.gene46962.t1 | AT1G56710 | 27.596 | 366 | 214 | 12 | 8 | 350 | 2 | 339 | 4.05e-22 | 98.2 |
| MS.gene46962.t1 | AT5G14650 | 26.506 | 332 | 206 | 11 | 1 | 323 | 1 | 303 | 3.40e-21 | 94.0 |
| MS.gene46962.t1 | AT2G43870 | 27.792 | 385 | 213 | 14 | 11 | 388 | 2 | 328 | 3.42e-20 | 92.0 |
| MS.gene46962.t1 | AT3G26610 | 26.183 | 317 | 188 | 10 | 48 | 350 | 68 | 352 | 4.35e-20 | 92.4 |
| MS.gene46962.t1 | AT1G10640 | 24.672 | 381 | 225 | 13 | 44 | 391 | 116 | 467 | 1.20e-19 | 91.3 |
| MS.gene46962.t1 | AT1G60590 | 22.997 | 387 | 227 | 11 | 44 | 391 | 120 | 474 | 1.22e-19 | 91.3 |
| MS.gene46962.t1 | AT3G59850 | 28.571 | 364 | 200 | 11 | 44 | 399 | 20 | 331 | 1.24e-19 | 90.5 |
| MS.gene46962.t1 | AT3G59850 | 29.121 | 364 | 198 | 12 | 44 | 399 | 64 | 375 | 1.32e-19 | 90.9 |
| MS.gene46962.t1 | AT4G35670 | 28.354 | 328 | 185 | 10 | 34 | 350 | 15 | 303 | 1.44e-19 | 90.1 |
| MS.gene46962.t1 | AT4G32375 | 31.220 | 205 | 120 | 4 | 150 | 350 | 19 | 206 | 1.44e-18 | 87.4 |
| MS.gene46962.t1 | AT3G07970 | 29.386 | 228 | 142 | 4 | 160 | 380 | 167 | 382 | 1.62e-18 | 87.4 |
| MS.gene46962.t1 | AT5G27530 | 28.617 | 311 | 172 | 10 | 48 | 350 | 54 | 322 | 2.20e-18 | 87.0 |
| MS.gene46962.t1 | AT4G35670 | 33.171 | 205 | 117 | 5 | 150 | 350 | 8 | 196 | 2.73e-18 | 85.1 |
| MS.gene46962.t1 | AT1G02460 | 26.250 | 320 | 193 | 8 | 48 | 350 | 90 | 383 | 5.74e-18 | 86.3 |
| MS.gene46962.t1 | AT4G32380 | 33.831 | 201 | 112 | 6 | 148 | 344 | 116 | 299 | 5.86e-18 | 85.9 |
| MS.gene46962.t1 | AT1G70500 | 25.065 | 387 | 238 | 11 | 4 | 380 | 35 | 379 | 7.63e-18 | 85.5 |
| MS.gene46962.t1 | AT5G39910 | 25.893 | 336 | 191 | 10 | 13 | 340 | 10 | 295 | 2.60e-17 | 83.2 |
| MS.gene46962.t1 | AT5G44840 | 28.431 | 306 | 187 | 9 | 49 | 350 | 26 | 303 | 4.03e-17 | 82.8 |
| MS.gene46962.t1 | AT2G43880 | 27.356 | 329 | 195 | 11 | 42 | 365 | 26 | 315 | 1.01e-16 | 81.3 |
| MS.gene46962.t1 | AT1G48100 | 24.516 | 310 | 190 | 9 | 49 | 343 | 82 | 362 | 1.32e-16 | 82.0 |
| MS.gene46962.t1 | AT2G43880 | 27.356 | 329 | 195 | 11 | 42 | 365 | 26 | 315 | 1.87e-16 | 80.9 |
| MS.gene46962.t1 | AT1G02790 | 27.469 | 324 | 190 | 11 | 8 | 323 | 15 | 301 | 2.62e-16 | 80.9 |
| MS.gene46962.t1 | AT1G23460 | 25.568 | 352 | 220 | 12 | 41 | 381 | 36 | 356 | 3.77e-16 | 80.5 |
| MS.gene46962.t1 | AT1G23460 | 25.568 | 352 | 220 | 12 | 41 | 381 | 60 | 380 | 4.10e-16 | 80.5 |
| MS.gene46962.t1 | AT2G15460 | 25.187 | 401 | 238 | 13 | 12 | 395 | 5 | 360 | 1.40e-15 | 78.6 |
| MS.gene46962.t1 | AT2G15470 | 24.938 | 401 | 239 | 13 | 12 | 395 | 5 | 360 | 2.88e-15 | 77.4 |
| MS.gene46962.t1 | AT4G32380 | 34.444 | 180 | 97 | 6 | 148 | 323 | 116 | 278 | 3.17e-15 | 77.4 |
| MS.gene46962.t1 | AT2G15450 | 24.938 | 401 | 239 | 13 | 12 | 395 | 5 | 360 | 4.63e-15 | 77.0 |
| MS.gene46962.t1 | AT1G80140 | 27.660 | 235 | 143 | 6 | 148 | 378 | 59 | 270 | 5.96e-15 | 75.9 |
| MS.gene46962.t1 | AT4G01890 | 25.392 | 319 | 195 | 9 | 49 | 350 | 67 | 359 | 8.54e-15 | 76.3 |
| MS.gene46962.t1 | AT4G32370 | 31.500 | 200 | 113 | 6 | 149 | 339 | 123 | 307 | 1.65e-14 | 74.7 |
| MS.gene46962.t1 | AT5G44830 | 32.308 | 195 | 103 | 5 | 160 | 350 | 75 | 244 | 1.89e-14 | 74.3 |
| MS.gene46962.t1 | AT2G26620 | 24.728 | 368 | 226 | 11 | 43 | 395 | 27 | 358 | 2.06e-14 | 74.7 |
| MS.gene46962.t1 | AT1G43090 | 24.363 | 353 | 227 | 9 | 43 | 385 | 27 | 349 | 4.76e-14 | 73.9 |
| MS.gene46962.t1 | AT1G43080 | 28.099 | 242 | 152 | 6 | 43 | 280 | 27 | 250 | 4.77e-14 | 73.9 |
| MS.gene46962.t1 | AT2G40310 | 24.796 | 367 | 229 | 12 | 43 | 395 | 27 | 360 | 5.31e-14 | 73.6 |
| MS.gene46962.t1 | AT2G43890 | 23.611 | 360 | 211 | 11 | 15 | 365 | 9 | 313 | 1.18e-13 | 72.4 |
| MS.gene46962.t1 | AT1G43100 | 24.079 | 353 | 228 | 9 | 43 | 385 | 27 | 349 | 2.91e-13 | 71.6 |
| MS.gene46962.t1 | AT4G13760 | 27.389 | 314 | 165 | 13 | 43 | 321 | 27 | 312 | 3.11e-13 | 71.2 |
| MS.gene46962.t1 | AT1G65570 | 25.240 | 313 | 189 | 10 | 14 | 323 | 13 | 283 | 4.26e-13 | 70.9 |
| MS.gene46962.t1 | AT4G18180 | 31.944 | 216 | 119 | 8 | 138 | 343 | 119 | 316 | 5.09e-13 | 70.9 |
| MS.gene46962.t1 | AT1G17150 | 25.410 | 366 | 225 | 13 | 43 | 395 | 29 | 359 | 6.96e-13 | 70.1 |
| MS.gene46962.t1 | AT1G05650 | 28.169 | 213 | 124 | 6 | 160 | 365 | 122 | 312 | 7.23e-13 | 70.1 |
| MS.gene46962.t1 | AT1G78400 | 24.646 | 353 | 222 | 11 | 49 | 389 | 37 | 357 | 2.57e-12 | 68.6 |
| MS.gene46962.t1 | AT3G14040 | 24.478 | 335 | 189 | 9 | 46 | 343 | 70 | 377 | 1.12e-11 | 66.6 |
| MS.gene46962.t1 | AT1G80170 | 23.151 | 311 | 187 | 11 | 49 | 343 | 55 | 329 | 2.07e-11 | 65.9 |
Find 119 sgRNAs with CRISPR-Local
Find 335 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTGAAATAATAATATTTC+TGG | 0.187682 | 3.1:+31873240 | None:intergenic |
| CGCTGAACTCAAAGGCATTC+AGG | 0.212276 | 3.1:-31877295 | MS.gene46962:CDS |
| TGTTCGATATGTCACGATTT+TGG | 0.231140 | 3.1:-31873016 | MS.gene46962:CDS |
| CATTCAGGGCAGCTATTTAT+AGG | 0.235860 | 3.1:-31877280 | MS.gene46962:CDS |
| TCTTCATTCTTTAGAGGTTA+TGG | 0.263528 | 3.1:-31874000 | MS.gene46962:intron |
| AGAAATGGGAGAAGAAAATA+AGG | 0.277810 | 3.1:+31877426 | None:intergenic |
| TTTATAGGATTCAGCACTTA+AGG | 0.299188 | 3.1:-31877265 | MS.gene46962:CDS |
| AGGCAGAGATAGAAGAGAAA+TGG | 0.313809 | 3.1:+31877411 | None:intergenic |
| TTCTTTAGAGGTTATGGAAT+TGG | 0.313836 | 3.1:-31873994 | MS.gene46962:intron |
| TTCACAACTGGTAGAGCATT+AGG | 0.314497 | 3.1:+31872197 | None:intergenic |
| GATGGTAAAGGTGCAATTAA+AGG | 0.319561 | 3.1:+31873971 | None:intergenic |
| GAATTACAATTAAGAGTGTT+TGG | 0.330158 | 3.1:-31872172 | MS.gene46962:CDS |
| GGGTCAATTCCATCAGTATT+AGG | 0.334899 | 3.1:+31872979 | None:intergenic |
| GGCAGAGATAGAAGAGAAAT+GGG | 0.340817 | 3.1:+31877412 | None:intergenic |
| ACGATTTCCATAACCGATTT+CGG | 0.346257 | 3.1:-31877338 | MS.gene46962:CDS |
| AATTACAATTAAGAGTGTTT+GGG | 0.348788 | 3.1:-31872171 | MS.gene46962:CDS |
| GAGGAGGAAAGTGGAGGGGA+TGG | 0.356412 | 3.1:+31877451 | None:intergenic |
| TCACAACTGGTAGAGCATTA+GGG | 0.385260 | 3.1:+31872198 | None:intergenic |
| ATCACGATCCGACGTATAAC+CGG | 0.392896 | 3.1:-31872455 | MS.gene46962:CDS |
| GGTGAGAATGGAACAATTGA+TGG | 0.408308 | 3.1:-31873343 | MS.gene46962:CDS |
| CCTACGGCAATGCCGGCAAA+TGG | 0.426213 | 3.1:+31872425 | None:intergenic |
| AGGAAGAGGAGGAAAGTGGA+GGG | 0.427667 | 3.1:+31877446 | None:intergenic |
| GACACCGCCGAAATCGGTTA+TGG | 0.431442 | 3.1:+31877331 | None:intergenic |
| ATGACTCTTTATCTTGCTGC+TGG | 0.433521 | 3.1:-31877170 | MS.gene46962:CDS |
| TCATATTCCACAACATGTTC+CGG | 0.439214 | 3.1:-31877389 | MS.gene46962:CDS |
| ATTGTAATTCCCTTCACAAC+TGG | 0.439300 | 3.1:+31872185 | None:intergenic |
| GTCGCCGACACCGCCGAAAT+CGG | 0.451079 | 3.1:+31877325 | None:intergenic |
| ACCGGATCGTCTCCATTTGC+CGG | 0.454556 | 3.1:-31872437 | MS.gene46962:CDS |
| GCTGAACTCAAAGGCATTCA+GGG | 0.462123 | 3.1:-31877294 | MS.gene46962:CDS |
| ATTGCACCTTTACCATCCTA+TGG | 0.463424 | 3.1:-31873965 | MS.gene46962:CDS |
| GAGGACTCATACATATCAAC+AGG | 0.465287 | 3.1:-31872548 | MS.gene46962:CDS |
| TTCCAATGTTTGTCTTAATG+TGG | 0.470222 | 3.1:+31872330 | None:intergenic |
| AATAAGGAAGAGGAGGAAAG+TGG | 0.470963 | 3.1:+31877442 | None:intergenic |
| ACACACCAGGAGGCACATAA+AGG | 0.475424 | 3.1:+31877225 | None:intergenic |
| CGCGACTCTCCTAATACTGA+TGG | 0.478994 | 3.1:-31872988 | MS.gene46962:CDS |
| CACTATGCCGGAACATGTTG+TGG | 0.484354 | 3.1:+31877382 | None:intergenic |
| AAACTTATATACCTTCCTCC+TGG | 0.491546 | 3.1:+31873926 | None:intergenic |
| TTCACTGCCTACGGCAATGC+CGG | 0.494196 | 3.1:+31872418 | None:intergenic |
| GCCTCCTGGTGTGTACTTAA+CGG | 0.495904 | 3.1:-31877216 | MS.gene46962:CDS |
| ATGTGTATATAGAAAATTCA+AGG | 0.496847 | 3.1:-31872274 | MS.gene46962:CDS |
| GTGTCGGAACGGCACTATGC+CGG | 0.505281 | 3.1:+31877370 | None:intergenic |
| TTTCACAAAAGGTTAGTCCT+TGG | 0.506890 | 3.1:-31872007 | MS.gene46962:CDS |
| GCCGGCAAATGGAGACGATC+CGG | 0.511985 | 3.1:+31872436 | None:intergenic |
| GTTGAAGAGGTTGATGTGTT+CGG | 0.513089 | 3.1:+31872367 | None:intergenic |
| GGGAGAAGAAAATAAGGAAG+AGG | 0.519954 | 3.1:+31877432 | None:intergenic |
| GAGCTCCCTTCCTCTTCCAT+AGG | 0.520454 | 3.1:+31873949 | None:intergenic |
| AAGGAAGAGGAGGAAAGTGG+AGG | 0.522976 | 3.1:+31877445 | None:intergenic |
| ACGCTCCTTTATGTGCCTCC+TGG | 0.523955 | 3.1:-31877230 | MS.gene46962:CDS |
| ATCCACATTAAGACAAACAT+TGG | 0.527637 | 3.1:-31872332 | MS.gene46962:CDS |
| TTGTGGCTGTGAAGAGTGGA+TGG | 0.529310 | 3.1:-31872517 | MS.gene46962:CDS |
| TAAGAGTGTTTGGGGTGTGA+AGG | 0.531402 | 3.1:-31872162 | MS.gene46962:intron |
| CCTCTTCCATAGGATGGTAA+AGG | 0.537136 | 3.1:+31873959 | None:intergenic |
| CCATTTGCCGGCATTGCCGT+AGG | 0.539892 | 3.1:-31872425 | MS.gene46962:CDS |
| CCTTTACCATCCTATGGAAG+AGG | 0.542977 | 3.1:-31873959 | MS.gene46962:CDS |
| GCCGTAGGCAGTGAAACATC+AGG | 0.545753 | 3.1:-31872410 | MS.gene46962:CDS |
| AACCTCTTCAACATGGGAGT+TGG | 0.547865 | 3.1:-31872356 | MS.gene46962:CDS |
| TCCCTTCCTCTTCCATAGGA+TGG | 0.549187 | 3.1:+31873953 | None:intergenic |
| ATTAAGACAAACATTGGAAG+AGG | 0.549285 | 3.1:-31872326 | MS.gene46962:CDS |
| AAATCGTGTCGGCGCGGTGT+CGG | 0.549772 | 3.1:+31877354 | None:intergenic |
| CGGCAAAACGCTGAACTCAA+AGG | 0.549793 | 3.1:-31877303 | MS.gene46962:CDS |
| GCCTGATGTTTCACTGCCTA+CGG | 0.550163 | 3.1:+31872409 | None:intergenic |
| AACTTATATACCTTCCTCCT+GGG | 0.554752 | 3.1:+31873927 | None:intergenic |
| TGGCTGCTCAGCTGAGAACA+TGG | 0.555382 | 3.1:+31871984 | None:intergenic |
| GGAAGAGGAGGAAAGTGGAG+GGG | 0.557569 | 3.1:+31877447 | None:intergenic |
| AGAAGAAAATAAGGAAGAGG+AGG | 0.558917 | 3.1:+31877435 | None:intergenic |
| ATAACCGATTTCGGCGGTGT+CGG | 0.559095 | 3.1:-31877329 | MS.gene46962:CDS |
| TATATAGAAAATTCAAGGCA+AGG | 0.561312 | 3.1:-31872269 | MS.gene46962:CDS |
| GATTTCGGCGGTGTCGGCGA+CGG | 0.562424 | 3.1:-31877323 | MS.gene46962:CDS |
| AACTGGATGTATGTTCCAGA+AGG | 0.563236 | 3.1:+31873198 | None:intergenic |
| CACATCAACCTCTTCAACAT+GGG | 0.564458 | 3.1:-31872362 | MS.gene46962:CDS |
| AAGAGTGGATGGGATGAATA+CGG | 0.568218 | 3.1:-31872506 | MS.gene46962:CDS |
| GTGTCGGCGCGGTGTCGGAA+CGG | 0.576004 | 3.1:+31877359 | None:intergenic |
| GGAAGAGGAAGGGAGCTCCC+AGG | 0.579032 | 3.1:-31873944 | MS.gene46962:CDS |
| TAATGCTCTACCAGTTGTGA+AGG | 0.579332 | 3.1:-31872195 | MS.gene46962:CDS |
| ATTACAATTAAGAGTGTTTG+GGG | 0.579707 | 3.1:-31872170 | MS.gene46962:CDS |
| CTCTCCGTTAAGTACACACC+AGG | 0.580616 | 3.1:+31877212 | None:intergenic |
| TACCATCCTATGGAAGAGGA+AGG | 0.581299 | 3.1:-31873955 | MS.gene46962:CDS |
| TGCTGTTATTAAAGCCACAC+AGG | 0.582451 | 3.1:-31877147 | MS.gene46962:intron |
| ACATACATCCAGTTTACTGC+AGG | 0.582961 | 3.1:-31873189 | MS.gene46962:intron |
| CTCAGCTGAGAACATGGCCA+AGG | 0.585760 | 3.1:+31871990 | None:intergenic |
| GAAGGGAGCTCCCAGGAGGA+AGG | 0.586526 | 3.1:-31873937 | MS.gene46962:CDS |
| AAGTTCAAATGTCTGCATAG+AGG | 0.586689 | 3.1:-31872567 | MS.gene46962:CDS |
| GGAACATGTTGTGGAATATG+AGG | 0.586776 | 3.1:+31877391 | None:intergenic |
| TCGTGATACCATTGCTAGGA+CGG | 0.588430 | 3.1:+31872471 | None:intergenic |
| TACCAACTCCCATGTTGAAG+AGG | 0.592901 | 3.1:+31872354 | None:intergenic |
| AATGGAACAATTGATGGGCA+AGG | 0.593507 | 3.1:-31873337 | MS.gene46962:CDS |
| GTTCGCGATGTAATCATCAC+AGG | 0.593930 | 3.1:-31873887 | MS.gene46962:intron |
| ACACATCAACCTCTTCAACA+TGG | 0.602365 | 3.1:-31872363 | MS.gene46962:CDS |
| GATGAATACGGTATTTCATA+CGG | 0.605569 | 3.1:-31872494 | MS.gene46962:CDS |
| GTGAGAATGGAACAATTGAT+GGG | 0.611373 | 3.1:-31873342 | MS.gene46962:CDS |
| AAGACAAACATTGGAAGAGG+AGG | 0.612632 | 3.1:-31872323 | MS.gene46962:CDS |
| ATCGGTTATGGAAATCGTGT+CGG | 0.613368 | 3.1:+31877343 | None:intergenic |
| TCATACGGCCGTCCTAGCAA+TGG | 0.613759 | 3.1:-31872479 | MS.gene46962:CDS |
| GATCTTGTGGCTGTGAAGAG+TGG | 0.616644 | 3.1:-31872521 | MS.gene46962:CDS |
| GAGATGTATGGTGGAACATG+TGG | 0.617873 | 3.1:-31873315 | MS.gene46962:CDS |
| AATGCTCTACCAGTTGTGAA+GGG | 0.623141 | 3.1:-31872194 | MS.gene46962:CDS |
| AAAACATCAGAACACTTCCA+AGG | 0.628023 | 3.1:+31872035 | None:intergenic |
| CGGATCGTGATACCATTGCT+AGG | 0.637558 | 3.1:+31872467 | None:intergenic |
| ACCATCCTATGGAAGAGGAA+GGG | 0.638578 | 3.1:-31873954 | MS.gene46962:CDS |
| ATCAACAGGAGATGATCTTG+TGG | 0.639297 | 3.1:-31872534 | MS.gene46962:CDS |
| GATCAGGTAGATCTCCACCT+TGG | 0.642012 | 3.1:-31872052 | MS.gene46962:CDS |
| TTGATGGGCAAGGAGATGTA+TGG | 0.649620 | 3.1:-31873327 | MS.gene46962:CDS |
| ACTGGATGTATGTTCCAGAA+GGG | 0.650858 | 3.1:+31873199 | None:intergenic |
| AATACTGATGGAATTGACCC+AGG | 0.653374 | 3.1:-31872976 | MS.gene46962:intron |
| ATGTATGGTGGAACATGTGG+AGG | 0.680192 | 3.1:-31873312 | MS.gene46962:CDS |
| ACATCAGAACACTTCCAAGG+TGG | 0.689498 | 3.1:+31872038 | None:intergenic |
| ATGGGCAAGGAGATGTATGG+TGG | 0.690153 | 3.1:-31873324 | MS.gene46962:CDS |
| CATCGCGAACTCCATCGCCG+TGG | 0.694091 | 3.1:+31873900 | None:intergenic |
| TGTGGCTGTGAAGAGTGGAT+GGG | 0.695217 | 3.1:-31872516 | MS.gene46962:CDS |
| AGAGGAAGGGAGCTCCCAGG+AGG | 0.696203 | 3.1:-31873941 | MS.gene46962:CDS |
| TTATGGAAATCGTGTCGGCG+CGG | 0.702772 | 3.1:+31877348 | None:intergenic |
| TCCGTTAAGTACACACCAGG+AGG | 0.707120 | 3.1:+31877215 | None:intergenic |
| AAAATAGCAACAAACCTGTG+TGG | 0.710508 | 3.1:+31877133 | None:intergenic |
| ATTCAGCACTTAAGGAGACG+TGG | 0.715137 | 3.1:-31877257 | MS.gene46962:CDS |
| GAGACGATCCGGTTATACGT+CGG | 0.721010 | 3.1:+31872447 | None:intergenic |
| ATTTCCATAACCGATTTCGG+CGG | 0.727085 | 3.1:-31877335 | MS.gene46962:CDS |
| TCAGTATTAGGAGAGTCGCG+AGG | 0.740798 | 3.1:+31872991 | None:intergenic |
| CAGCACTTAAGGAGACGTGG+TGG | 0.748468 | 3.1:-31877254 | MS.gene46962:CDS |
| GTAGGCAGTGAAACATCAGG+CGG | 0.764061 | 3.1:-31872407 | MS.gene46962:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATAAATTTAAAAAATT+GGG | - | chr3.1:31873848-31873867 | MS.gene46962:intron | 0.0% |
| !!! | TTTTTATAAATTTAAAAAAT+TGG | - | chr3.1:31873847-31873866 | MS.gene46962:intron | 0.0% |
| !!! | TTTTTTAAATTTATAAAAAA+TGG | + | chr3.1:31873846-31873865 | None:intergenic | 0.0% |
| !! | AAAATATTTACTTATTATAG+TGG | - | chr3.1:31872836-31872855 | MS.gene46962:intron | 10.0% |
| !! | AAATATTTACTTATTATAGT+GGG | - | chr3.1:31872837-31872856 | MS.gene46962:intron | 10.0% |
| !! | AAATTAGAACAAAAAAAAAA+AGG | + | chr3.1:31872384-31872403 | None:intergenic | 10.0% |
| !! | AATTAGAACAAAAAAAAAAA+GGG | + | chr3.1:31872383-31872402 | None:intergenic | 10.0% |
| !! | AATTTATAAAAAATGGAAAA+TGG | + | chr3.1:31873839-31873858 | None:intergenic | 10.0% |
| !! | ACCTATTATATATATTATAA+TGG | + | chr3.1:31873350-31873369 | None:intergenic | 10.0% |
| !! | ATATTTAATATGATTAAAGA+TGG | - | chr3.1:31872896-31872915 | MS.gene46962:intron | 10.0% |
| !! | CAATAAATTACTTTAAATTA+TGG | + | chr3.1:31873420-31873439 | None:intergenic | 10.0% |
| !! | CCTATTATATATATTATAAT+GGG | + | chr3.1:31873349-31873368 | None:intergenic | 10.0% |
| !! | CTATTATATATATTATAATG+GGG | + | chr3.1:31873348-31873367 | None:intergenic | 10.0% |
| !! | TATTATATATATTATAATGG+GGG | + | chr3.1:31873347-31873366 | None:intergenic | 10.0% |
| !! | TATTTAATATGATTAAAGAT+GGG | - | chr3.1:31872897-31872916 | MS.gene46962:intron | 10.0% |
| !! | TGTTATATGAAAAAAAAATT+AGG | - | chr3.1:31872682-31872701 | MS.gene46962:intron | 10.0% |
| !!! | AAAAAATGATTTTTGTTTTT+TGG | - | chr3.1:31872587-31872606 | MS.gene46962:intron | 10.0% |
| !!! | AACAATAAATTATATTTTGA+TGG | - | chr3.1:31874485-31874504 | MS.gene46962:intron | 10.0% |
| !!! | AATAATTGTAACATATTTTT+TGG | - | chr3.1:31875084-31875103 | MS.gene46962:intron | 10.0% |
| !!! | AATTTTTTTTTCATATAACA+AGG | + | chr3.1:31872682-31872701 | None:intergenic | 10.0% |
| !!! | ACAATAAATTATATTTTGAT+GGG | - | chr3.1:31874486-31874505 | MS.gene46962:intron | 10.0% |
| !!! | ATTTGAAATAATAATATTTC+TGG | + | chr3.1:31876227-31876246 | None:intergenic | 10.0% |
| !!! | CAAAAAATCATAATTTTTAT+GGG | + | chr3.1:31874405-31874424 | None:intergenic | 10.0% |
| !!! | TAAATAATTAATTTTTGAAG+AGG | + | chr3.1:31873806-31873825 | None:intergenic | 10.0% |
| !!! | TATTTTATTTTTTTGTACAA+TGG | + | chr3.1:31876351-31876370 | None:intergenic | 10.0% |
| !! | AAAAATTGATACAAACTAAA+AGG | - | chr3.1:31876300-31876319 | MS.gene46962:intron | 15.0% |
| !! | AAAAGTCAAATTATTGTTTA+AGG | + | chr3.1:31873131-31873150 | None:intergenic | 15.0% |
| !! | AAAATAAAAAATGCATCATA+GGG | - | chr3.1:31876365-31876384 | MS.gene46962:intron | 15.0% |
| !! | AACTGTAATATAATAATAAG+AGG | + | chr3.1:31873778-31873797 | None:intergenic | 15.0% |
| !! | AATTAACATGAAAATTTGTA+AGG | - | chr3.1:31872933-31872952 | MS.gene46962:intron | 15.0% |
| !! | AGTAATTTATTGAAAACAAT+AGG | - | chr3.1:31873428-31873447 | MS.gene46962:intron | 15.0% |
| !! | ATGGTAAATATTAGAATTTA+CGG | - | chr3.1:31874099-31874118 | MS.gene46962:intron | 15.0% |
| !! | ATTAGAACAAAAAAAAAAAG+GGG | + | chr3.1:31872382-31872401 | None:intergenic | 15.0% |
| !! | CATTGAATAACTAATATTTA+TGG | - | chr3.1:31872707-31872726 | MS.gene46962:intron | 15.0% |
| !! | CCCATTATAATATATATAAT+AGG | - | chr3.1:31873346-31873365 | MS.gene46962:intron | 15.0% |
| !! | TAAAATAAAAAATGCATCAT+AGG | - | chr3.1:31876364-31876383 | MS.gene46962:intron | 15.0% |
| !! | TATATAGATTAAGTTATGTT+TGG | - | chr3.1:31876616-31876635 | MS.gene46962:intron | 15.0% |
| !! | TTAACTTACTTAAGAATTAT+AGG | - | chr3.1:31875039-31875058 | MS.gene46962:intron | 15.0% |
| !! | TTTAAATTCACACAAAAATT+AGG | + | chr3.1:31875315-31875334 | None:intergenic | 15.0% |
| !!! | AAAGTTTTGAATTACATTTT+AGG | + | chr3.1:31876404-31876423 | None:intergenic | 15.0% |
| !!! | AAATCAAAACAAATCTTTTT+TGG | + | chr3.1:31874430-31874449 | None:intergenic | 15.0% |
| !!! | AATGAATCTAAAATGTTTAT+TGG | - | chr3.1:31875877-31875896 | MS.gene46962:intron | 15.0% |
| !!! | ACAAATTAAATAATTTGTCT+AGG | - | chr3.1:31873041-31873060 | MS.gene46962:intron | 15.0% |
| !!! | ATGAATCTAAAATGTTTATT+GGG | - | chr3.1:31875878-31875897 | MS.gene46962:intron | 15.0% |
| !!! | ATTATTGATGATATTACAAA+TGG | - | chr3.1:31874080-31874099 | MS.gene46962:intron | 15.0% |
| !!! | ATTTAGTATTGTTTTCTAAT+AGG | - | chr3.1:31872655-31872674 | MS.gene46962:intron | 15.0% |
| !!! | CAAATTAAATAATTTGTCTA+GGG | - | chr3.1:31873042-31873061 | MS.gene46962:intron | 15.0% |
| !!! | GCAAAAAATCATAATTTTTA+TGG | + | chr3.1:31874406-31874425 | None:intergenic | 15.0% |
| !!! | TAAAAAAAGTACATTCTTTA+AGG | + | chr3.1:31873183-31873202 | None:intergenic | 15.0% |
| !!! | TAATTATTTTAGATGCTATT+AGG | + | chr3.1:31875847-31875866 | None:intergenic | 15.0% |
| !! | AAAAATAAGACTACAGATAA+TGG | - | chr3.1:31874744-31874763 | MS.gene46962:intron | 20.0% |
| !! | AAAATAAGACTACAGATAAT+GGG | - | chr3.1:31874745-31874764 | MS.gene46962:intron | 20.0% |
| !! | AAAGAAAAAGTTTATTAACC+AGG | + | chr3.1:31874030-31874049 | None:intergenic | 20.0% |
| !! | AAATAAAAAATGCATCATAG+GGG | - | chr3.1:31876366-31876385 | MS.gene46962:intron | 20.0% |
| !! | AATATAAGTCATGAGATAAT+CGG | + | chr3.1:31874220-31874239 | None:intergenic | 20.0% |
| !! | ATAAATAATATGTATTCCAG+CGG | + | chr3.1:31873717-31873736 | None:intergenic | 20.0% |
| !! | ATGTGTATATAGAAAATTCA+AGG | - | chr3.1:31877190-31877209 | MS.gene46962:CDS | 20.0% |
| !! | GTATCATTAATTGAGTTAAT+TGG | - | chr3.1:31873481-31873500 | MS.gene46962:intron | 20.0% |
| !! | GTGAATAGTTTATATAAGAT+GGG | + | chr3.1:31873394-31873413 | None:intergenic | 20.0% |
| !! | TAGAAATACAATAGTATAGT+AGG | + | chr3.1:31873586-31873605 | None:intergenic | 20.0% |
| !! | TGAATAGTTTATATAAGATG+GGG | + | chr3.1:31873393-31873412 | None:intergenic | 20.0% |
| !! | TGTGAATAGTTTATATAAGA+TGG | + | chr3.1:31873395-31873414 | None:intergenic | 20.0% |
| !! | TTTGACCATACATTATTTAA+AGG | + | chr3.1:31874727-31874746 | None:intergenic | 20.0% |
| !!! | AATTACAATTAAGAGTGTTT+GGG | - | chr3.1:31877293-31877312 | MS.gene46962:CDS | 20.0% |
| !!! | ACAAACACAATTTTGTTTTT+TGG | - | chr3.1:31872529-31872548 | MS.gene46962:CDS | 20.0% |
| !!! | GACAAATTATTTAATTTGTG+TGG | + | chr3.1:31873040-31873059 | None:intergenic | 20.0% |
| !!! | TTCAAAAATTAGTTTACAAG+AGG | - | chr3.1:31876760-31876779 | MS.gene46962:intron | 20.0% |
| !!! | TTCTATTATCAAGTTGAATT+TGG | - | chr3.1:31874932-31874951 | MS.gene46962:intron | 20.0% |
| !!! | TTTTCTCAACAATTCTATTT+GGG | + | chr3.1:31875184-31875203 | None:intergenic | 20.0% |
| !!! | TTTTTCTCAACAATTCTATT+TGG | + | chr3.1:31875185-31875204 | None:intergenic | 20.0% |
| ! | AACATTACACTACCAAATAA+TGG | + | chr3.1:31875365-31875384 | None:intergenic | 25.0% |
| ! | AACGATTTCATAAGATGAAA+CGG | - | chr3.1:31874281-31874300 | MS.gene46962:intron | 25.0% |
| ! | ACAGAACATTGAATCAATTA+TGG | + | chr3.1:31875954-31875973 | None:intergenic | 25.0% |
| ! | ATGCTCCTTTAAATAATGTA+TGG | - | chr3.1:31874719-31874738 | MS.gene46962:intron | 25.0% |
| ! | ATTCTTTCAACAAGTTGTTT+AGG | - | chr3.1:31876030-31876049 | MS.gene46962:intron | 25.0% |
| ! | CCAGGTAATAAAAATGAAAT+TGG | + | chr3.1:31874012-31874031 | None:intergenic | 25.0% |
| ! | GGAATCAACATTAATAAGTT+TGG | + | chr3.1:31876550-31876569 | None:intergenic | 25.0% |
| ! | TAAATAATATGTATTCCAGC+GGG | + | chr3.1:31873716-31873735 | None:intergenic | 25.0% |
| ! | TAGAAACAAATCTCAGTAAA+AGG | + | chr3.1:31877366-31877385 | None:intergenic | 25.0% |
| ! | TATATAGAAAATTCAAGGCA+AGG | - | chr3.1:31877195-31877214 | MS.gene46962:CDS | 25.0% |
| ! | TATTCGATTTATTTATGTCC+TGG | - | chr3.1:31873690-31873709 | MS.gene46962:intron | 25.0% |
| ! | TCGATAAATGATCTTTACAA+TGG | - | chr3.1:31876576-31876595 | MS.gene46962:intron | 25.0% |
| ! | TGAGTATAAATAAATGATCG+AGG | - | chr3.1:31873006-31873025 | MS.gene46962:CDS | 25.0% |
| ! | TGGAATTCAAAAATTCAACA+AGG | + | chr3.1:31876207-31876226 | None:intergenic | 25.0% |
| ! | TGTGTGAATTTAAATGTGAT+TGG | - | chr3.1:31875321-31875340 | MS.gene46962:intron | 25.0% |
| ! | TTCAAAAATTCAACAAGGTT+TGG | + | chr3.1:31876202-31876221 | None:intergenic | 25.0% |
| ! | TTCTATGATATTAACCTTCA+TGG | - | chr3.1:31877381-31877400 | MS.gene46962:CDS | 25.0% |
| ! | TTTAAGGAAGAAAGTTCTAT+CGG | + | chr3.1:31876520-31876539 | None:intergenic | 25.0% |
| !! | AAGATCATTTATCGAAGTTT+TGG | + | chr3.1:31876571-31876590 | None:intergenic | 25.0% |
| !! | ACTCTTGGAATTTAAAATGA+GGG | - | chr3.1:31874996-31875015 | MS.gene46962:intron | 25.0% |
| !! | ATAGAAGAGTACATCAATAA+TGG | + | chr3.1:31874918-31874937 | None:intergenic | 25.0% |
| !! | TAAAATCCCATATTTGGAAT+AGG | - | chr3.1:31875230-31875249 | MS.gene46962:intron | 25.0% |
| !! | TTAGGGTTAAAATTTTCATC+TGG | + | chr3.1:31877252-31877271 | None:intergenic | 25.0% |
| !!! | ACAATTTTGTTTTTTGGCTA+TGG | - | chr3.1:31872535-31872554 | MS.gene46962:CDS | 25.0% |
| !!! | AGGTATATAAGTTTTATCCA+CGG | - | chr3.1:31875547-31875566 | MS.gene46962:intron | 25.0% |
| !!! | ATTACAATTAAGAGTGTTTG+GGG | - | chr3.1:31877294-31877313 | MS.gene46962:CDS | 25.0% |
| !!! | CCAATTTCATTTTTATTACC+TGG | - | chr3.1:31874009-31874028 | MS.gene46962:intron | 25.0% |
| !!! | GAATTACAATTAAGAGTGTT+TGG | - | chr3.1:31877292-31877311 | MS.gene46962:CDS | 25.0% |
| !!! | TGATTTTTGTTTTTTGGCTA+TGG | - | chr3.1:31872593-31872612 | MS.gene46962:intron | 25.0% |
| !!! | TGTTTTTGGATTTTCACAAA+AGG | - | chr3.1:31877446-31877465 | MS.gene46962:CDS | 25.0% |
| AAATTCCTGCAGTAACTTTA+AGG | + | chr3.1:31875809-31875828 | None:intergenic | 30.0% | |
| ACAAGTTAAGGAGCTTAAAA+TGG | + | chr3.1:31874643-31874662 | None:intergenic | 30.0% | |
| ACCTATGAAAATAAGAGTGA+AGG | + | chr3.1:31876104-31876123 | None:intergenic | 30.0% | |
| AGAAATGGGAGAAGAAAATA+AGG | + | chr3.1:31872041-31872060 | None:intergenic | 30.0% | |
| AGAGATTAGGTTTCATAGAT+TGG | + | chr3.1:31876076-31876095 | None:intergenic | 30.0% | |
| ATCCACATTAAGACAAACAT+TGG | - | chr3.1:31877132-31877151 | MS.gene46962:intron | 30.0% | |
| ATGTGTGTTATATATAGTGG+CGG | - | chr3.1:31873505-31873524 | MS.gene46962:intron | 30.0% | |
| ATTAAGACAAACATTGGAAG+AGG | - | chr3.1:31877138-31877157 | MS.gene46962:intron | 30.0% | |
| ATTAGGTTTCATAGATTGGT+AGG | + | chr3.1:31876072-31876091 | None:intergenic | 30.0% | |
| CTAGACTAAAATCCCATATT+TGG | - | chr3.1:31875224-31875243 | MS.gene46962:intron | 30.0% | |
| GATGAATACGGTATTTCATA+CGG | - | chr3.1:31876970-31876989 | MS.gene46962:intron | 30.0% | |
| GGTATGTGTGTTATATATAG+TGG | - | chr3.1:31873502-31873521 | MS.gene46962:intron | 30.0% | |
| GGTGCAAAAATATAAATGTG+AGG | + | chr3.1:31873565-31873584 | None:intergenic | 30.0% | |
| GTGAATTTAAATGTGATTGG+AGG | - | chr3.1:31875324-31875343 | MS.gene46962:intron | 30.0% | |
| TAAAACCTTAAAGTTACTGC+AGG | - | chr3.1:31875801-31875820 | MS.gene46962:intron | 30.0% | |
| TAATTCAAAAGCAGGAGATT+CGG | + | chr3.1:31873896-31873915 | None:intergenic | 30.0% | |
| TACCATGTAAATATGACTCT+TGG | - | chr3.1:31874981-31875000 | MS.gene46962:intron | 30.0% | |
| TATCTCGTTAATTCAAAAGC+AGG | + | chr3.1:31873904-31873923 | None:intergenic | 30.0% | |
| TATGAAAATAAGAGTGAAGG+AGG | + | chr3.1:31876101-31876120 | None:intergenic | 30.0% | |
| TATGTGTTGTGACCATTATT+TGG | - | chr3.1:31875350-31875369 | MS.gene46962:intron | 30.0% | |
| TGTAAAGTTGAGCTTGAAAT+AGG | + | chr3.1:31872466-31872485 | None:intergenic | 30.0% | |
| TGTGTTTGTTTCATGTGATA+AGG | + | chr3.1:31872518-31872537 | None:intergenic | 30.0% | |
| TTCCAAGAGTCATATTTACA+TGG | + | chr3.1:31874986-31875005 | None:intergenic | 30.0% | |
| TTCCAATGTTTGTCTTAATG+TGG | + | chr3.1:31877137-31877156 | None:intergenic | 30.0% | |
| TTCCTTTCTTCATTCTTTAG+AGG | - | chr3.1:31875458-31875477 | MS.gene46962:intron | 30.0% | |
| TTGTCTCCTTAAAAGAAGTT+AGG | - | chr3.1:31876659-31876678 | MS.gene46962:intron | 30.0% | |
| TTTATAGGATTCAGCACTTA+AGG | - | chr3.1:31872199-31872218 | MS.gene46962:CDS | 30.0% | |
| ! | AACCTCTAAAGAATGAAGAA+AGG | + | chr3.1:31875463-31875482 | None:intergenic | 30.0% |
| ! | ATAAAAATTGCTGGTGATGT+AGG | - | chr3.1:31877219-31877238 | MS.gene46962:CDS | 30.0% |
| ! | ATGCGCTTATCTTTTATGTA+TGG | - | chr3.1:31876717-31876736 | MS.gene46962:intron | 30.0% |
| ! | CTAGAGTTTCACAAGTTTTA+TGG | + | chr3.1:31875208-31875227 | None:intergenic | 30.0% |
| ! | GACTCTTGGAATTTAAAATG+AGG | - | chr3.1:31874995-31875014 | MS.gene46962:intron | 30.0% |
| ! | GTTTGTCCTAACTTCTTTTA+AGG | + | chr3.1:31876668-31876687 | None:intergenic | 30.0% |
| ! | TAAGTTTGGAGCTAGATTTA+AGG | + | chr3.1:31876536-31876555 | None:intergenic | 30.0% |
| ! | TCTTCATTCTTTAGAGGTTA+TGG | - | chr3.1:31875464-31875483 | MS.gene46962:intron | 30.0% |
| ! | TTACTTATTATAGTGGGAAG+AGG | - | chr3.1:31872843-31872862 | MS.gene46962:intron | 30.0% |
| ! | TTCTTTAGAGGTTATGGAAT+TGG | - | chr3.1:31875470-31875489 | MS.gene46962:intron | 30.0% |
| !! | AGCATGCAATTTTCTTGTTT+TGG | + | chr3.1:31875909-31875928 | None:intergenic | 30.0% |
| !! | CTTATTTTCATAGGTGAGAA+TGG | - | chr3.1:31876109-31876128 | MS.gene46962:intron | 30.0% |
| !!! | CAGTAACTTTAAGGTTTTAG+AGG | + | chr3.1:31875800-31875819 | None:intergenic | 30.0% |
| !!! | CTTTTTAACTTATGCTCCAA+GGG | + | chr3.1:31874527-31874546 | None:intergenic | 30.0% |
| !!! | TCCTTCACTCTTATTTTCAT+AGG | - | chr3.1:31876100-31876119 | MS.gene46962:intron | 30.0% |
| AAAACATCAGAACACTTCCA+AGG | + | chr3.1:31877432-31877451 | None:intergenic | 35.0% | |
| AAAATAGCAACAAACCTGTG+TGG | + | chr3.1:31872334-31872353 | None:intergenic | 35.0% | |
| AAACTTATATACCTTCCTCC+TGG | + | chr3.1:31875541-31875560 | None:intergenic | 35.0% | |
| AACAGCTCATTCATGAACTA+TGG | - | chr3.1:31874776-31874795 | MS.gene46962:intron | 35.0% | |
| AACTTATATACCTTCCTCCT+GGG | + | chr3.1:31875540-31875559 | None:intergenic | 35.0% | |
| AAGAGATGTGTTCGATAACA+TGG | - | chr3.1:31874240-31874259 | MS.gene46962:intron | 35.0% | |
| AAGTTCAAATGTCTGCATAG+AGG | - | chr3.1:31876897-31876916 | MS.gene46962:intron | 35.0% | |
| AAGTTCTATCGGTATTTACC+TGG | + | chr3.1:31876509-31876528 | None:intergenic | 35.0% | |
| ACAAAACCAACTGCATAACA+TGG | + | chr3.1:31874892-31874911 | None:intergenic | 35.0% | |
| ACAATTGTTTGTGTTTCACC+TGG | - | chr3.1:31872483-31872502 | MS.gene46962:CDS | 35.0% | |
| AGAAGAAAATAAGGAAGAGG+AGG | + | chr3.1:31872032-31872051 | None:intergenic | 35.0% | |
| AGGCAAGGAATAAAAATTGC+TGG | - | chr3.1:31877210-31877229 | MS.gene46962:CDS | 35.0% | |
| AGGTGCAAAACAAAAAACTG+AGG | + | chr3.1:31873619-31873638 | None:intergenic | 35.0% | |
| AGTCCTCCTATTCCAAATAT+GGG | + | chr3.1:31875239-31875258 | None:intergenic | 35.0% | |
| AGTTCTATCGGTATTTACCT+GGG | + | chr3.1:31876508-31876527 | None:intergenic | 35.0% | |
| ATTGTAATTCCCTTCACAAC+TGG | + | chr3.1:31877282-31877301 | None:intergenic | 35.0% | |
| CAATTTCCATGTTATGCAGT+TGG | - | chr3.1:31874883-31874902 | MS.gene46962:intron | 35.0% | |
| CCTTGGAGCATAAGTTAAAA+AGG | - | chr3.1:31874525-31874544 | MS.gene46962:intron | 35.0% | |
| CTTCAAAGGACTAAAATCAG+TGG | - | chr3.1:31874809-31874828 | MS.gene46962:intron | 35.0% | |
| GATTTCAAAGTCAGATGCAA+AGG | + | chr3.1:31873642-31873661 | None:intergenic | 35.0% | |
| GGTGCAAAACAAAAAACTGA+GGG | + | chr3.1:31873618-31873637 | None:intergenic | 35.0% | |
| GTGAGAATGGAACAATTGAT+GGG | - | chr3.1:31876122-31876141 | MS.gene46962:intron | 35.0% | |
| GTGCAAAACAAAAAACTGAG+GGG | + | chr3.1:31873617-31873636 | None:intergenic | 35.0% | |
| TAATGTTGCAGCAAAATCTG+AGG | - | chr3.1:31875710-31875729 | MS.gene46962:intron | 35.0% | |
| TAGTCCTCCTATTCCAAATA+TGG | + | chr3.1:31875240-31875259 | None:intergenic | 35.0% | |
| TCATATTCCACAACATGTTC+CGG | - | chr3.1:31872075-31872094 | MS.gene46962:intron | 35.0% | |
| TCTATATAGTAAACCTGCCA+AGG | + | chr3.1:31876604-31876623 | None:intergenic | 35.0% | |
| TTTGCATTATACCACACATG+TGG | + | chr3.1:31875687-31875706 | None:intergenic | 35.0% | |
| ! | AATAATTTGTCTAGGGAGAG+TGG | - | chr3.1:31873049-31873068 | MS.gene46962:intron | 35.0% |
| ! | AATCCCATATTTGGAATAGG+AGG | - | chr3.1:31875233-31875252 | MS.gene46962:intron | 35.0% |
| ! | ACGATTTCCATAACCGATTT+CGG | - | chr3.1:31872126-31872145 | MS.gene46962:intron | 35.0% |
| ! | CATACATCTAGAGTGGTATT+GGG | - | chr3.1:31873306-31873325 | MS.gene46962:CDS | 35.0% |
| ! | CTTGGAATTTAAAATGAGGG+TGG | - | chr3.1:31874999-31875018 | MS.gene46962:intron | 35.0% |
| ! | GATGGTAAAGGTGCAATTAA+AGG | + | chr3.1:31875496-31875515 | None:intergenic | 35.0% |
| ! | TGTTCGATATGTCACGATTT+TGG | - | chr3.1:31876448-31876467 | MS.gene46962:intron | 35.0% |
| ! | TTCTAAGAGAAACACTTGTG+TGG | + | chr3.1:31876809-31876828 | None:intergenic | 35.0% |
| ! | TTTCACAAAAGGTTAGTCCT+TGG | - | chr3.1:31877457-31877476 | MS.gene46962:CDS | 35.0% |
| !! | ATGAGTATGGTTCTAAGTTG+TGG | - | chr3.1:31875655-31875674 | MS.gene46962:intron | 35.0% |
| !! | TTTTCAAGAATTCTCCCTTC+TGG | - | chr3.1:31876251-31876270 | MS.gene46962:intron | 35.0% |
| !!! | ATTTTAGTCCTTTGAAGCTC+AGG | + | chr3.1:31874806-31874825 | None:intergenic | 35.0% |
| !!! | CCTTTTTAACTTATGCTCCA+AGG | + | chr3.1:31874528-31874547 | None:intergenic | 35.0% |
| !!! | TGGAAGTGTTCTGATGTTTT+TGG | - | chr3.1:31877432-31877451 | MS.gene46962:CDS | 35.0% |
| !!! | TGTTATGCAGTTGGTTTTGT+TGG | - | chr3.1:31874892-31874911 | MS.gene46962:intron | 35.0% |
| AAAATGCATCATAGGGGTAG+AGG | - | chr3.1:31876372-31876391 | MS.gene46962:intron | 40.0% | |
| AACTGGATGTATGTTCCAGA+AGG | + | chr3.1:31876269-31876288 | None:intergenic | 40.0% | |
| AAGACAAACATTGGAAGAGG+AGG | - | chr3.1:31877141-31877160 | MS.gene46962:intron | 40.0% | |
| AAGAGTGGATGGGATGAATA+CGG | - | chr3.1:31876958-31876977 | MS.gene46962:intron | 40.0% | |
| AATAAGGAAGAGGAGGAAAG+TGG | + | chr3.1:31872025-31872044 | None:intergenic | 40.0% | |
| AATACTGATGGAATTGACCC+AGG | - | chr3.1:31876488-31876507 | MS.gene46962:intron | 40.0% | |
| AATGCTCTACCAGTTGTGAA+GGG | - | chr3.1:31877270-31877289 | MS.gene46962:CDS | 40.0% | |
| ACACATCAACCTCTTCAACA+TGG | - | chr3.1:31877101-31877120 | MS.gene46962:intron | 40.0% | |
| ACTGGATGTATGTTCCAGAA+GGG | + | chr3.1:31876268-31876287 | None:intergenic | 40.0% | |
| AGCTCATTCATGAACTATGG+TGG | - | chr3.1:31874779-31874798 | MS.gene46962:intron | 40.0% | |
| AGGCAGAGATAGAAGAGAAA+TGG | + | chr3.1:31872056-31872075 | None:intergenic | 40.0% | |
| ATATAAATGTGAGGACGTGC+AGG | + | chr3.1:31873556-31873575 | None:intergenic | 40.0% | |
| ATCAACAGGAGATGATCTTG+TGG | - | chr3.1:31876930-31876949 | MS.gene46962:intron | 40.0% | |
| ATCGGTTATGGAAATCGTGT+CGG | + | chr3.1:31872124-31872143 | None:intergenic | 40.0% | |
| ATGACTCTTTATCTTGCTGC+TGG | - | chr3.1:31872294-31872313 | MS.gene46962:CDS | 40.0% | |
| ATTAACCTTCATGGTGAGAC+AGG | - | chr3.1:31877390-31877409 | MS.gene46962:CDS | 40.0% | |
| ATTGCACCTTTACCATCCTA+TGG | - | chr3.1:31875499-31875518 | MS.gene46962:intron | 40.0% | |
| CAAAGGACTAAAATCAGTGG+TGG | - | chr3.1:31874812-31874831 | MS.gene46962:intron | 40.0% | |
| CAACAACATTGCTGCAATGA+AGG | + | chr3.1:31876430-31876449 | None:intergenic | 40.0% | |
| CAAGAGGAGAAAATCTTGTG+TGG | - | chr3.1:31876776-31876795 | MS.gene46962:intron | 40.0% | |
| CACATCAACCTCTTCAACAT+GGG | - | chr3.1:31877102-31877121 | MS.gene46962:intron | 40.0% | |
| CAGCAAAATCTGAGGAAATG+TGG | - | chr3.1:31875718-31875737 | MS.gene46962:intron | 40.0% | |
| CAGTTTCACAACCACTATTG+TGG | + | chr3.1:31875768-31875787 | None:intergenic | 40.0% | |
| CATTCAGGGCAGCTATTTAT+AGG | - | chr3.1:31872184-31872203 | MS.gene46962:CDS | 40.0% | |
| CCAATACCACTCTAGATGTA+TGG | + | chr3.1:31873308-31873327 | None:intergenic | 40.0% | |
| CTAGATCCATACATCTAGAG+TGG | - | chr3.1:31873299-31873318 | MS.gene46962:CDS | 40.0% | |
| CTTAGAACCATACTCATCAC+TGG | + | chr3.1:31875652-31875671 | None:intergenic | 40.0% | |
| GAGGACTCATACATATCAAC+AGG | - | chr3.1:31876916-31876935 | MS.gene46962:intron | 40.0% | |
| GCTCATTCATGAACTATGGT+GGG | - | chr3.1:31874780-31874799 | MS.gene46962:intron | 40.0% | |
| GGAACATGTTGTGGAATATG+AGG | + | chr3.1:31872076-31872095 | None:intergenic | 40.0% | |
| GGAGAGTGGTAACAAGTTTA+AGG | - | chr3.1:31873063-31873082 | MS.gene46962:intron | 40.0% | |
| GGCAGAGATAGAAGAGAAAT+GGG | + | chr3.1:31872055-31872074 | None:intergenic | 40.0% | |
| GGGAGAAGAAAATAAGGAAG+AGG | + | chr3.1:31872035-31872054 | None:intergenic | 40.0% | |
| GGGTCAATTCCATCAGTATT+AGG | + | chr3.1:31876488-31876507 | None:intergenic | 40.0% | |
| GGTGAGAATGGAACAATTGA+TGG | - | chr3.1:31876121-31876140 | MS.gene46962:intron | 40.0% | |
| GGTGTGACAAGAAAATGATG+TGG | + | chr3.1:31876330-31876349 | None:intergenic | 40.0% | |
| TAATGCTCTACCAGTTGTGA+AGG | - | chr3.1:31877269-31877288 | MS.gene46962:CDS | 40.0% | |
| TATCTCACCAGTGATGAGTA+TGG | - | chr3.1:31875642-31875661 | MS.gene46962:intron | 40.0% | |
| TGATCTTTACAATGGCTCCT+TGG | - | chr3.1:31876584-31876603 | MS.gene46962:intron | 40.0% | |
| TGCTGTTATTAAAGCCACAC+AGG | - | chr3.1:31872317-31872336 | MS.gene46962:CDS | 40.0% | |
| TTCAAAGTCAGATGCAAAGG+AGG | + | chr3.1:31873639-31873658 | None:intergenic | 40.0% | |
| TTGTGTTTCACCTGGTAAAG+TGG | - | chr3.1:31872491-31872510 | MS.gene46962:CDS | 40.0% | |
| ! | AATGGAACAATTGATGGGCA+AGG | - | chr3.1:31876127-31876146 | MS.gene46962:intron | 40.0% |
| ! | ATTTCCATAACCGATTTCGG+CGG | - | chr3.1:31872129-31872148 | MS.gene46962:intron | 40.0% |
| ! | CCATACATCTAGAGTGGTAT+TGG | - | chr3.1:31873305-31873324 | MS.gene46962:CDS | 40.0% |
| ! | GTGGTTGTGAAACTGTTTTG+CGG | - | chr3.1:31875773-31875792 | MS.gene46962:intron | 40.0% |
| ! | TCACAACTGGTAGAGCATTA+GGG | + | chr3.1:31877269-31877288 | None:intergenic | 40.0% |
| ! | TTCACAACTGGTAGAGCATT+AGG | + | chr3.1:31877270-31877289 | None:intergenic | 40.0% |
| !! | AATAGTATCGGCCACAATAG+TGG | - | chr3.1:31875754-31875773 | MS.gene46962:intron | 40.0% |
| !! | ATAAGTTTTATCCACGGCGA+TGG | - | chr3.1:31875553-31875572 | MS.gene46962:intron | 40.0% |
| !! | ATGGTTCTAAGTTGTGGATC+TGG | - | chr3.1:31875661-31875680 | MS.gene46962:intron | 40.0% |
| !! | CATGTTAACTTGTGCCCTAA+GGG | + | chr3.1:31874667-31874686 | None:intergenic | 40.0% |
| !! | GAAATGTTAACTTGTGCCCT+TGG | - | chr3.1:31874508-31874527 | MS.gene46962:intron | 40.0% |
| !! | GACTACAGATAATGGGTTGT+CGG | - | chr3.1:31874752-31874771 | MS.gene46962:intron | 40.0% |
| !! | GTTGAAGAGGTTGATGTGTT+CGG | + | chr3.1:31877100-31877119 | None:intergenic | 40.0% |
| !! | TCATGTTAACTTGTGCCCTA+AGG | + | chr3.1:31874668-31874687 | None:intergenic | 40.0% |
| AACCTCTTCAACATGGGAGT+TGG | - | chr3.1:31877108-31877127 | MS.gene46962:intron | 45.0% | |
| ACATCAGAACACTTCCAAGG+TGG | + | chr3.1:31877429-31877448 | None:intergenic | 45.0% | |
| ACCATCCTATGGAAGAGGAA+GGG | - | chr3.1:31875510-31875529 | MS.gene46962:intron | 45.0% | |
| AGGACTAAAATCAGTGGTGG+TGG | - | chr3.1:31874815-31874834 | MS.gene46962:intron | 45.0% | |
| AGTGAAGGAGGAGAGAGATT+AGG | + | chr3.1:31876089-31876108 | None:intergenic | 45.0% | |
| ATCACGATCCGACGTATAAC+CGG | - | chr3.1:31877009-31877028 | MS.gene46962:intron | 45.0% | |
| ATTCAGCACTTAAGGAGACG+TGG | - | chr3.1:31872207-31872226 | MS.gene46962:CDS | 45.0% | |
| CCTCTTCCATAGGATGGTAA+AGG | + | chr3.1:31875508-31875527 | None:intergenic | 45.0% | |
| CCTTTACCATCCTATGGAAG+AGG | - | chr3.1:31875505-31875524 | MS.gene46962:intron | 45.0% | |
| CGATACTATTGTGCCAGCAT+CGG | + | chr3.1:31875744-31875763 | None:intergenic | 45.0% | |
| CGATGCTGGCACAATAGTAT+CGG | - | chr3.1:31875742-31875761 | MS.gene46962:intron | 45.0% | |
| GAGAAAATCTTGTGTGGTCC+TGG | - | chr3.1:31876782-31876801 | MS.gene46962:intron | 45.0% | |
| GCGATGTAATCATCACAGGT+TGG | - | chr3.1:31875581-31875600 | MS.gene46962:intron | 45.0% | |
| GGACTAAAATCAGTGGTGGT+GGG | - | chr3.1:31874816-31874835 | MS.gene46962:intron | 45.0% | |
| GTGATAAGGACCACTTTACC+AGG | + | chr3.1:31872504-31872523 | None:intergenic | 45.0% | |
| GTTCGCGATGTAATCATCAC+AGG | - | chr3.1:31875577-31875596 | MS.gene46962:intron | 45.0% | |
| TACCAACTCCCATGTTGAAG+AGG | + | chr3.1:31877113-31877132 | None:intergenic | 45.0% | |
| TACCATCCTATGGAAGAGGA+AGG | - | chr3.1:31875509-31875528 | MS.gene46962:intron | 45.0% | |
| TCGTGATACCATTGCTAGGA+CGG | + | chr3.1:31876996-31877015 | None:intergenic | 45.0% | |
| TCTGCATGGTTGCATGTGAA+TGG | - | chr3.1:31874845-31874864 | MS.gene46962:intron | 45.0% | |
| ! | AAAAGCAGGAGATTCGGTCT+TGG | + | chr3.1:31873890-31873909 | None:intergenic | 45.0% |
| ! | AAAGCAGGAGATTCGGTCTT+GGG | + | chr3.1:31873889-31873908 | None:intergenic | 45.0% |
| ! | ATGTATGGTGGAACATGTGG+AGG | - | chr3.1:31876152-31876171 | MS.gene46962:intron | 45.0% |
| ! | CTAGAGTGGTATTGGGAATG+CGG | - | chr3.1:31873313-31873332 | MS.gene46962:CDS | 45.0% |
| ! | GAGATGTATGGTGGAACATG+TGG | - | chr3.1:31876149-31876168 | MS.gene46962:intron | 45.0% |
| ! | TTGATGGGCAAGGAGATGTA+TGG | - | chr3.1:31876137-31876156 | MS.gene46962:intron | 45.0% |
| !! | CTCCTTAACTTGTGCCCTTA+GGG | - | chr3.1:31874650-31874669 | MS.gene46962:intron | 45.0% |
| !! | CTGCAAGCTGGTTTGATACA+TGG | - | chr3.1:31877327-31877346 | MS.gene46962:CDS | 45.0% |
| !! | GCTGAACTCAAAGGCATTCA+GGG | - | chr3.1:31872170-31872189 | MS.gene46962:CDS | 45.0% |
| !! | TAAGAGTGTTTGGGGTGTGA+AGG | - | chr3.1:31877302-31877321 | MS.gene46962:CDS | 45.0% |
| !! | AATAAATTACTTTAAATTAT+GGG | + | chr3.1:31873419-31873438 | None:intergenic | 5.0% |
| AAGGAAGAGGAGGAAAGTGG+AGG | + | chr3.1:31872022-31872041 | None:intergenic | 50.0% | |
| AATATGTATTCCAGCGGGCC+AGG | + | chr3.1:31873711-31873730 | None:intergenic | 50.0% | |
| AGGAAGAGGAGGAAAGTGGA+GGG | + | chr3.1:31872021-31872040 | None:intergenic | 50.0% | |
| ATGGGCAAGGAGATGTATGG+TGG | - | chr3.1:31876140-31876159 | MS.gene46962:intron | 50.0% | |
| CACTATGCCGGAACATGTTG+TGG | + | chr3.1:31872085-31872104 | None:intergenic | 50.0% | |
| CGCGACTCTCCTAATACTGA+TGG | - | chr3.1:31876476-31876495 | MS.gene46962:intron | 50.0% | |
| CGGATCGTGATACCATTGCT+AGG | + | chr3.1:31877000-31877019 | None:intergenic | 50.0% | |
| CGGCAAAACGCTGAACTCAA+AGG | - | chr3.1:31872161-31872180 | MS.gene46962:intron | 50.0% | |
| CTCTCCGTTAAGTACACACC+AGG | + | chr3.1:31872255-31872274 | None:intergenic | 50.0% | |
| CTGATCCTGTCTCACCATGA+AGG | + | chr3.1:31877398-31877417 | None:intergenic | 50.0% | |
| CTTCATGGTGAGACAGGATC+AGG | - | chr3.1:31877396-31877415 | MS.gene46962:CDS | 50.0% | |
| CTTTACAATGGCTCCTTGGC+AGG | - | chr3.1:31876588-31876607 | MS.gene46962:intron | 50.0% | |
| GAGAAACACTTGTGTGGACC+AGG | + | chr3.1:31876803-31876822 | None:intergenic | 50.0% | |
| GAGACGATCCGGTTATACGT+CGG | + | chr3.1:31877020-31877039 | None:intergenic | 50.0% | |
| GATCAGGTAGATCTCCACCT+TGG | - | chr3.1:31877412-31877431 | MS.gene46962:CDS | 50.0% | |
| GATCTTGTGGCTGTGAAGAG+TGG | - | chr3.1:31876943-31876962 | MS.gene46962:intron | 50.0% | |
| GCCTCCTGGTGTGTACTTAA+CGG | - | chr3.1:31872248-31872267 | MS.gene46962:CDS | 50.0% | |
| GCCTGATGTTTCACTGCCTA+CGG | + | chr3.1:31877058-31877077 | None:intergenic | 50.0% | |
| GTAGGCAGTGAAACATCAGG+CGG | - | chr3.1:31877057-31877076 | MS.gene46962:intron | 50.0% | |
| TCAGTATTAGGAGAGTCGCG+AGG | + | chr3.1:31876476-31876495 | None:intergenic | 50.0% | |
| TCCCTTCCTCTTCCATAGGA+TGG | + | chr3.1:31875514-31875533 | None:intergenic | 50.0% | |
| TCCGTTAAGTACACACCAGG+AGG | + | chr3.1:31872252-31872271 | None:intergenic | 50.0% | |
| TGTGGCTGTGAAGAGTGGAT+GGG | - | chr3.1:31876948-31876967 | MS.gene46962:intron | 50.0% | |
| TTATTTATGTCCTGGCCCGC+TGG | - | chr3.1:31873698-31873717 | MS.gene46962:intron | 50.0% | |
| TTGTGGCTGTGAAGAGTGGA+TGG | - | chr3.1:31876947-31876966 | MS.gene46962:intron | 50.0% | |
| ! | ACACACCAGGAGGCACATAA+AGG | + | chr3.1:31872242-31872261 | None:intergenic | 50.0% |
| ! | ATAACCGATTTCGGCGGTGT+CGG | - | chr3.1:31872135-31872154 | MS.gene46962:intron | 50.0% |
| ! | TGCCCTAAGGGCACAAGTTA+AGG | + | chr3.1:31874655-31874674 | None:intergenic | 50.0% |
| ! | TTATGGAAATCGTGTCGGCG+CGG | + | chr3.1:31872119-31872138 | None:intergenic | 50.0% |
| !! | AAATCAGTGGTGGTGGGTCT+TGG | - | chr3.1:31874822-31874841 | MS.gene46962:intron | 50.0% |
| !! | CGCTGAACTCAAAGGCATTC+AGG | - | chr3.1:31872169-31872188 | MS.gene46962:CDS | 50.0% |
| !! | GCTCCTTAACTTGTGCCCTT+AGG | - | chr3.1:31874649-31874668 | MS.gene46962:intron | 50.0% |
| ACCGGATCGTCTCCATTTGC+CGG | - | chr3.1:31877027-31877046 | MS.gene46962:intron | 55.0% | |
| ACGCTCCTTTATGTGCCTCC+TGG | - | chr3.1:31872234-31872253 | MS.gene46962:CDS | 55.0% | |
| CAGCACTTAAGGAGACGTGG+TGG | - | chr3.1:31872210-31872229 | MS.gene46962:CDS | 55.0% | |
| GACACCGCCGAAATCGGTTA+TGG | + | chr3.1:31872136-31872155 | None:intergenic | 55.0% | |
| GAGCTCCCTTCCTCTTCCAT+AGG | + | chr3.1:31875518-31875537 | None:intergenic | 55.0% | |
| GCCGTAGGCAGTGAAACATC+AGG | - | chr3.1:31877054-31877073 | MS.gene46962:intron | 55.0% | |
| GGAAGAGGAGGAAAGTGGAG+GGG | + | chr3.1:31872020-31872039 | None:intergenic | 55.0% | |
| GGTGTGAAGGTTCTGCAAGC+TGG | - | chr3.1:31877315-31877334 | MS.gene46962:CDS | 55.0% | |
| TCATACGGCCGTCCTAGCAA+TGG | - | chr3.1:31876985-31877004 | MS.gene46962:intron | 55.0% | |
| TGAGGAAATGTGGCCGATGC+TGG | - | chr3.1:31875728-31875747 | MS.gene46962:intron | 55.0% | |
| TGCATCCCCTGAGATGAACG+TGG | + | chr3.1:31873533-31873552 | None:intergenic | 55.0% | |
| TGTGGATCTGGCCACATGTG+TGG | - | chr3.1:31875673-31875692 | MS.gene46962:intron | 55.0% | |
| TTCACTGCCTACGGCAATGC+CGG | + | chr3.1:31877049-31877068 | None:intergenic | 55.0% | |
| !! | ATGGTGGGCCTGAGCTTCAA+AGG | - | chr3.1:31874795-31874814 | MS.gene46962:intron | 55.0% |
| CCATTTGCCGGCATTGCCGT+AGG | - | chr3.1:31877039-31877058 | MS.gene46962:intron | 60.0% | |
| CCTACGGCAATGCCGGCAAA+TGG | + | chr3.1:31877042-31877061 | None:intergenic | 60.0% | |
| CGGAGCCACGTTCATCTCAG+GGG | - | chr3.1:31873525-31873544 | MS.gene46962:intron | 60.0% | |
| GAGGAGGAAAGTGGAGGGGA+TGG | + | chr3.1:31872016-31872035 | None:intergenic | 60.0% | |
| GCCGGCAAATGGAGACGATC+CGG | + | chr3.1:31877031-31877050 | None:intergenic | 60.0% | |
| GCGGAGCCACGTTCATCTCA+GGG | - | chr3.1:31873524-31873543 | MS.gene46962:intron | 60.0% | |
| GTGTCGGAACGGCACTATGC+CGG | + | chr3.1:31872097-31872116 | None:intergenic | 60.0% | |
| ! | AAATCGTGTCGGCGCGGTGT+CGG | + | chr3.1:31872113-31872132 | None:intergenic | 60.0% |
| !! | GTGGTGGGTCTTGGTCTGCA+TGG | - | chr3.1:31874831-31874850 | MS.gene46962:intron | 60.0% |
| AGAGGAAGGGAGCTCCCAGG+AGG | - | chr3.1:31875523-31875542 | MS.gene46962:intron | 65.0% | |
| CATCGCGAACTCCATCGCCG+TGG | + | chr3.1:31875567-31875586 | None:intergenic | 65.0% | |
| GAAGGGAGCTCCCAGGAGGA+AGG | - | chr3.1:31875527-31875546 | MS.gene46962:intron | 65.0% | |
| GGAAGAGGAAGGGAGCTCCC+AGG | - | chr3.1:31875520-31875539 | MS.gene46962:intron | 65.0% | |
| GGCGGAGCCACGTTCATCTC+AGG | - | chr3.1:31873523-31873542 | MS.gene46962:intron | 65.0% | |
| GTCGCCGACACCGCCGAAAT+CGG | + | chr3.1:31872142-31872161 | None:intergenic | 65.0% | |
| !! | GATTTCGGCGGTGTCGGCGA+CGG | - | chr3.1:31872141-31872160 | MS.gene46962:intron | 65.0% |
| ! | GTGTCGGCGCGGTGTCGGAA+CGG | + | chr3.1:31872108-31872127 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 31871991 | 31877495 | 31871991 | ID=MS.gene46962 |
| chr3.1 | mRNA | 31871991 | 31877495 | 31871991 | ID=MS.gene46962.t1;Parent=MS.gene46962 |
| chr3.1 | exon | 31877148 | 31877495 | 31877148 | ID=MS.gene46962.t1.exon1;Parent=MS.gene46962.t1 |
| chr3.1 | CDS | 31877148 | 31877495 | 31877148 | ID=cds.MS.gene46962.t1;Parent=MS.gene46962.t1 |
| chr3.1 | exon | 31873888 | 31874008 | 31873888 | ID=MS.gene46962.t1.exon2;Parent=MS.gene46962.t1 |
| chr3.1 | CDS | 31873888 | 31874008 | 31873888 | ID=cds.MS.gene46962.t1;Parent=MS.gene46962.t1 |
| chr3.1 | exon | 31873190 | 31873364 | 31873190 | ID=MS.gene46962.t1.exon3;Parent=MS.gene46962.t1 |
| chr3.1 | CDS | 31873190 | 31873364 | 31873190 | ID=cds.MS.gene46962.t1;Parent=MS.gene46962.t1 |
| chr3.1 | exon | 31872977 | 31873047 | 31872977 | ID=MS.gene46962.t1.exon4;Parent=MS.gene46962.t1 |
| chr3.1 | CDS | 31872977 | 31873047 | 31872977 | ID=cds.MS.gene46962.t1;Parent=MS.gene46962.t1 |
| chr3.1 | exon | 31872163 | 31872593 | 31872163 | ID=MS.gene46962.t1.exon5;Parent=MS.gene46962.t1 |
| chr3.1 | CDS | 31872163 | 31872593 | 31872163 | ID=cds.MS.gene46962.t1;Parent=MS.gene46962.t1 |
| chr3.1 | exon | 31871991 | 31872074 | 31871991 | ID=MS.gene46962.t1.exon6;Parent=MS.gene46962.t1 |
| chr3.1 | CDS | 31871991 | 31872074 | 31871991 | ID=cds.MS.gene46962.t1;Parent=MS.gene46962.t1 |
| Gene Sequence |
| Protein sequence |
