Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019701.t1 | XP_013444760.1 | 83.6 | 207 | 34 | 0 | 1 | 207 | 23 | 229 | 7.60E-92 | 346.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019701.t1 | A0A072TZ19 | 83.6 | 207 | 34 | 0 | 1 | 207 | 23 | 229 | 5.5e-92 | 346.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene043435 | MS.gene019701 | PPI |
| MS.gene34167 | MS.gene019701 | PPI |
| MS.gene001687 | MS.gene019701 | PPI |
| MS.gene21111 | MS.gene019701 | PPI |
| MS.gene60589 | MS.gene019701 | PPI |
| MS.gene82915 | MS.gene019701 | PPI |
| MS.gene026968 | MS.gene019701 | PPI |
| MS.gene005399 | MS.gene019701 | PPI |
| MS.gene066059 | MS.gene019701 | PPI |
| MS.gene055808 | MS.gene019701 | PPI |
| MS.gene21110 | MS.gene019701 | PPI |
| MS.gene005865 | MS.gene019701 | PPI |
| MS.gene31468 | MS.gene019701 | PPI |
| MS.gene028903 | MS.gene019701 | PPI |
| MS.gene036564 | MS.gene019701 | PPI |
| MS.gene21227 | MS.gene019701 | PPI |
| MS.gene20938 | MS.gene019701 | PPI |
| MS.gene035256 | MS.gene019701 | PPI |
| MS.gene60861 | MS.gene019701 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019701.t1 | MTR_8g028485 | 97.101 | 207 | 6 | 0 | 1 | 207 | 23 | 229 | 1.15e-152 | 422 |
| MS.gene019701.t1 | MTR_8g087440 | 97.101 | 207 | 6 | 0 | 1 | 207 | 23 | 229 | 2.01e-151 | 419 |
| MS.gene019701.t1 | MTR_7g117435 | 87.313 | 134 | 17 | 0 | 29 | 162 | 4 | 137 | 1.22e-78 | 231 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019701.t1 | AT1G14620 | 74.396 | 207 | 53 | 0 | 1 | 207 | 27 | 233 | 1.23e-116 | 331 |
| MS.gene019701.t1 | AT1G14620 | 73.750 | 160 | 42 | 0 | 1 | 160 | 27 | 186 | 2.08e-85 | 252 |
Find 35 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCTCTATGGTGATGCTTA+TGG | 0.140363 | 8.1:+73119710 | MS.gene019701:CDS |
| ATAAACAATAGGGTCAATTT+TGG | 0.159588 | 8.1:-73116676 | None:intergenic |
| TTCTCTATGGTGATGCTTAT+GGG | 0.182684 | 8.1:+73119711 | MS.gene019701:CDS |
| GATCCTGTCTGCTCTTCTTT+AGG | 0.268390 | 8.1:-73120148 | None:intergenic |
| AGACTTTACCTTCTTCTCTA+TGG | 0.321156 | 8.1:+73119698 | MS.gene019701:CDS |
| TCTTGAAAAGCATAAACAAT+AGG | 0.362252 | 8.1:-73116687 | None:intergenic |
| GCTTCGGTGATTCGCGGTGC+TGG | 0.381981 | 8.1:-73119071 | None:intergenic |
| GCAAATGCGAGGACTTTGTT+TGG | 0.409693 | 8.1:+73120469 | MS.gene019701:CDS |
| CAAATGCGAGGACTTTGTTT+GGG | 0.426350 | 8.1:+73120470 | MS.gene019701:CDS |
| GGTGACTAAGGATGAATTGA+TGG | 0.429874 | 8.1:+73120491 | MS.gene019701:CDS |
| AAATGCTCCGATGGCTCATA+TGG | 0.433853 | 8.1:+73120117 | MS.gene019701:CDS |
| CTTGAAAAGCATAAACAATA+GGG | 0.439024 | 8.1:-73116686 | None:intergenic |
| GGACTTTGTTTGGGTGACTA+AGG | 0.440940 | 8.1:+73120479 | MS.gene019701:CDS |
| TCTCTTTAGGTCACTACAAA+GGG | 0.480712 | 8.1:+73119664 | MS.gene019701:intron |
| TGCCACACAGGCTTTCCACT+TGG | 0.491497 | 8.1:-73119737 | None:intergenic |
| TTTCAATGGCTAGGTTTCGA+TGG | 0.497557 | 8.1:+73118235 | MS.gene019701:intron |
| AAGCATCACCATAGAGAAGA+AGG | 0.501775 | 8.1:-73119706 | None:intergenic |
| TCTCTATGGTGATGCTTATG+GGG | 0.516069 | 8.1:+73119712 | MS.gene019701:CDS |
| GGATCTGTCTAGAAATTCAT+CGG | 0.534929 | 8.1:-73118283 | None:intergenic |
| GTCTCTTTAGGTCACTACAA+AGG | 0.536519 | 8.1:+73119663 | MS.gene019701:intron |
| GATCTGTCTAGAAATTCATC+GGG | 0.564894 | 8.1:-73118282 | None:intergenic |
| CAGCCTAAAGAAGAGCAGAC+AGG | 0.565138 | 8.1:+73120145 | MS.gene019701:CDS |
| TTGTCTGCTTCGGTGATTCG+CGG | 0.572285 | 8.1:-73119077 | None:intergenic |
| ATCAGAGGATACTATGCGTA+AGG | 0.577968 | 8.1:+73119781 | MS.gene019701:CDS |
| TTCTAGACAGATCCGATGCA+AGG | 0.596915 | 8.1:+73118292 | MS.gene019701:CDS |
| CTCCAAGTGGAAAGCCTGTG+TGG | 0.603277 | 8.1:+73119735 | MS.gene019701:CDS |
| TGAGTACCCATACCTTGCAT+CGG | 0.607480 | 8.1:-73118304 | None:intergenic |
| CAATGGCTAGGTTTCGATGG+CGG | 0.614979 | 8.1:+73118238 | MS.gene019701:intron |
| TGAACAACCATATGAGCCAT+CGG | 0.625422 | 8.1:-73120124 | None:intergenic |
| GCTGTTTGAGAGATTGCCTG+TGG | 0.631922 | 8.1:+73116647 | MS.gene019701:CDS |
| CAGACAAACAAAATGATCGA+AGG | 0.632787 | 8.1:+73119093 | MS.gene019701:CDS |
| GTTCGACATTGGCAAATGCG+AGG | 0.666005 | 8.1:+73120458 | MS.gene019701:CDS |
| TCTGCGTTGAAATCAGTCGT+AGG | 0.666687 | 8.1:+73120067 | MS.gene019701:CDS |
| GATGCTTATGGGGCTCCAAG+TGG | 0.683285 | 8.1:+73119722 | MS.gene019701:CDS |
| CAATCTCTCAAACAGCACAG+AGG | 0.749554 | 8.1:-73116640 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCTTATTATTTTAAATATCA+GGG | + | chr8.1:73117627-73117646 | MS.gene019701:intron | 10.0% |
| !!! | TTCTTATTATTTTAAATATC+AGG | + | chr8.1:73117626-73117645 | MS.gene019701:intron | 10.0% |
| !!! | TTTTATATTTTTTCGTTTAT+GGG | + | chr8.1:73118579-73118598 | MS.gene019701:intron | 10.0% |
| !! | ACACGATAAAAAAATAATAA+AGG | - | chr8.1:73119392-73119411 | None:intergenic | 15.0% |
| !! | TCTATTATTATCTAAGAAAT+AGG | - | chr8.1:73119506-73119525 | None:intergenic | 15.0% |
| !!! | AATACAAATTTTAACGAAAA+AGG | + | chr8.1:73117530-73117549 | MS.gene019701:intron | 15.0% |
| !!! | ATTACCCTTTTATTAAAAAT+GGG | - | chr8.1:73117963-73117982 | None:intergenic | 15.0% |
| !!! | CTTATTATTTTAAATATCAG+GGG | + | chr8.1:73117628-73117647 | MS.gene019701:intron | 15.0% |
| !!! | CTTTTATATTTTTTCGTTTA+TGG | + | chr8.1:73118578-73118597 | MS.gene019701:intron | 15.0% |
| !!! | TATTACCCTTTTATTAAAAA+TGG | - | chr8.1:73117964-73117983 | None:intergenic | 15.0% |
| !!! | TTCTTTTGTATTTTACAAAT+TGG | - | chr8.1:73117450-73117469 | None:intergenic | 15.0% |
| !!! | TTTATAACTACGTTTTTTAT+GGG | + | chr8.1:73118211-73118230 | MS.gene019701:intron | 15.0% |
| !!! | TTTTATAACTACGTTTTTTA+TGG | + | chr8.1:73118210-73118229 | MS.gene019701:intron | 15.0% |
| !! | AAAAATAGTTTACACTAGAA+GGG | + | chr8.1:73117790-73117809 | MS.gene019701:intron | 20.0% |
| !! | AAATATCAGTTACTTGTTTA+CGG | - | chr8.1:73118889-73118908 | None:intergenic | 20.0% |
| !! | AAATGTTTCATTTCAATTTC+TGG | + | chr8.1:73119161-73119180 | MS.gene019701:intron | 20.0% |
| !! | GTAAAAATATATGAGAAAGA+GGG | - | chr8.1:73117821-73117840 | None:intergenic | 20.0% |
| !! | TAAAAATAGTTTACACTAGA+AGG | + | chr8.1:73117789-73117808 | MS.gene019701:intron | 20.0% |
| !! | TGAAATGAAACATTTACTAA+TGG | - | chr8.1:73119156-73119175 | None:intergenic | 20.0% |
| !! | TGTAAAAATATATGAGAAAG+AGG | - | chr8.1:73117822-73117841 | None:intergenic | 20.0% |
| !! | TTCATACTAAAGAGAAAATA+AGG | + | chr8.1:73117885-73117904 | MS.gene019701:intron | 20.0% |
| !!! | AATAAAGCATCAAAGTAAAA+TGG | + | chr8.1:73116799-73116818 | MS.gene019701:intron | 20.0% |
| !!! | ATAAATCAGAAGTATTGAAA+AGG | - | chr8.1:73120341-73120360 | None:intergenic | 20.0% |
| !!! | CATTGATTAATTTAAAAGAG+AGG | + | chr8.1:73118363-73118382 | MS.gene019701:intron | 20.0% |
| !!! | TTACCCTTTTATTAAAAATG+GGG | - | chr8.1:73117962-73117981 | None:intergenic | 20.0% |
| !!! | TTATAACTACGTTTTTTATG+GGG | + | chr8.1:73118212-73118231 | MS.gene019701:intron | 20.0% |
| !!! | TTCCAATATGTTATTTCTAT+CGG | + | chr8.1:73120239-73120258 | MS.gene019701:intron | 20.0% |
| !!! | TTCTATCATAAACCATATTT+TGG | - | chr8.1:73117334-73117353 | None:intergenic | 20.0% |
| !!! | TTCTTTTTTCTCATTTAAGA+TGG | + | chr8.1:73118017-73118036 | MS.gene019701:intron | 20.0% |
| !!! | TTTCACGTTTAATTTAGTTT+TGG | + | chr8.1:73116829-73116848 | MS.gene019701:intron | 20.0% |
| !!! | TTTTACTATAGATGTTCTTA+TGG | + | chr8.1:73119334-73119353 | MS.gene019701:intron | 20.0% |
| ! | AAACCAAGCTAATAATTCAT+TGG | - | chr8.1:73119249-73119268 | None:intergenic | 25.0% |
| ! | AACGTTGATCAAAATGATTA+TGG | + | chr8.1:73116906-73116925 | MS.gene019701:intron | 25.0% |
| ! | AACTAATAAACTTGAATAGC+CGG | - | chr8.1:73118528-73118547 | None:intergenic | 25.0% |
| ! | AAGATATATGAAATACGAAG+GGG | - | chr8.1:73119828-73119847 | None:intergenic | 25.0% |
| ! | AATATCAGTTACTTGTTTAC+GGG | - | chr8.1:73118888-73118907 | None:intergenic | 25.0% |
| ! | AGATTTGGAGATTAATGAAT+TGG | + | chr8.1:73117307-73117326 | MS.gene019701:intron | 25.0% |
| ! | ATGAAAATATTAGAGAGTTG+AGG | + | chr8.1:73117143-73117162 | MS.gene019701:intron | 25.0% |
| ! | ATGAAAATTGTTTACTTTCC+AGG | + | chr8.1:73119018-73119037 | MS.gene019701:intron | 25.0% |
| ! | ATTAGCAATGATAAAGCAAA+TGG | - | chr8.1:73119577-73119596 | None:intergenic | 25.0% |
| ! | CAAAATATTGGATTCTCATT+GGG | + | chr8.1:73117758-73117777 | MS.gene019701:intron | 25.0% |
| ! | GAAGATATATGAAATACGAA+GGG | - | chr8.1:73119829-73119848 | None:intergenic | 25.0% |
| ! | TAAGCATATCTGCAAAATAT+TGG | + | chr8.1:73117746-73117765 | MS.gene019701:intron | 25.0% |
| ! | TAATGAATTGGACCAAAATA+TGG | + | chr8.1:73117319-73117338 | MS.gene019701:intron | 25.0% |
| ! | TACCGATAGAAATAACATAT+TGG | - | chr8.1:73120244-73120263 | None:intergenic | 25.0% |
| ! | TATCAGGGGATATATATATA+CGG | + | chr8.1:73117642-73117661 | MS.gene019701:intron | 25.0% |
| ! | TGAAAATTGTTTACTTTCCA+GGG | + | chr8.1:73119019-73119038 | MS.gene019701:intron | 25.0% |
| ! | TGCTGTTAATATTACATAGT+TGG | + | chr8.1:73118074-73118093 | MS.gene019701:intron | 25.0% |
| ! | TGGTTTATGATAGAACATTA+TGG | + | chr8.1:73117339-73117358 | MS.gene019701:intron | 25.0% |
| ! | TGTTGCTGTAAAACTAATTT+CGG | - | chr8.1:73117686-73117705 | None:intergenic | 25.0% |
| ! | TTATCGAATAGTTGTAAGAT+CGG | + | chr8.1:73117000-73117019 | MS.gene019701:intron | 25.0% |
| ! | TTCGTATTTCATATATCTTC+CGG | + | chr8.1:73119829-73119848 | MS.gene019701:intron | 25.0% |
| !! | AGAAAAAGTATATGAATCAG+AGG | + | chr8.1:73119766-73119785 | MS.gene019701:CDS | 25.0% |
| !! | ATAAACAATAGGGTCAATTT+TGG | - | chr8.1:73116679-73116698 | None:intergenic | 25.0% |
| !! | ATATTTTATGAAGAGTAACG+TGG | + | chr8.1:73118903-73118922 | MS.gene019701:intron | 25.0% |
| !! | ATTTTCTCTTTAGTATGAAG+AGG | - | chr8.1:73117884-73117903 | None:intergenic | 25.0% |
| !! | CATTTAAGATGGAAAAAATG+AGG | + | chr8.1:73118028-73118047 | MS.gene019701:intron | 25.0% |
| !! | CTTGAAAAGCATAAACAATA+GGG | - | chr8.1:73116689-73116708 | None:intergenic | 25.0% |
| !! | CTTTCGAATACATATTTTGT+CGG | + | chr8.1:73120094-73120113 | MS.gene019701:CDS | 25.0% |
| !! | TAAACAATAGGGTCAATTTT+GGG | - | chr8.1:73116678-73116697 | None:intergenic | 25.0% |
| !! | TCTTGAAAAGCATAAACAAT+AGG | - | chr8.1:73116690-73116709 | None:intergenic | 25.0% |
| !! | TTTTGCAGATATGCTTAAAA+AGG | - | chr8.1:73117743-73117762 | None:intergenic | 25.0% |
| !!! | AGTATTGAAAAGGCTAATTT+TGG | - | chr8.1:73120331-73120350 | None:intergenic | 25.0% |
| !!! | ATCTTTTAAGGTATGCTTAT+AGG | + | chr8.1:73120174-73120193 | MS.gene019701:intron | 25.0% |
| !!! | CACATTTCAATCTTTTTTGT+AGG | - | chr8.1:73118771-73118790 | None:intergenic | 25.0% |
| !!! | GTGTTTTAGCTTTGTAATAT+TGG | + | chr8.1:73119408-73119427 | MS.gene019701:intron | 25.0% |
| !!! | TAAAACTAATTTCGGGTTTA+AGG | - | chr8.1:73117678-73117697 | None:intergenic | 25.0% |
| !!! | TCTGATTCATATACTTTTTC+TGG | - | chr8.1:73119767-73119786 | None:intergenic | 25.0% |
| !!! | TGTCCCCATTTTTAATAAAA+GGG | + | chr8.1:73117956-73117975 | MS.gene019701:intron | 25.0% |
| !!! | TTGTCCCCATTTTTAATAAA+AGG | + | chr8.1:73117955-73117974 | MS.gene019701:intron | 25.0% |
| !!! | TTTTCTGAAAATGACTTTGT+AGG | + | chr8.1:73120274-73120293 | MS.gene019701:intron | 25.0% |
| AAAATTGTTTACTTTCCAGG+GGG | + | chr8.1:73119021-73119040 | MS.gene019701:intron | 30.0% | |
| AAATAAGGAAACTTGTCTTC+TGG | + | chr8.1:73117900-73117919 | MS.gene019701:intron | 30.0% | |
| AAATATATCAATGTGAGGAC+AGG | + | chr8.1:73119465-73119484 | MS.gene019701:intron | 30.0% | |
| AAATGATCAGTCTGCTAAAT+TGG | - | chr8.1:73119125-73119144 | None:intergenic | 30.0% | |
| AAGTACAACAAACAACAGAA+GGG | - | chr8.1:73118162-73118181 | None:intergenic | 30.0% | |
| AATGATTATGGTGGTTGAAA+TGG | + | chr8.1:73116918-73116937 | MS.gene019701:intron | 30.0% | |
| ACTATAGATGTTCTTATGGA+AGG | + | chr8.1:73119338-73119357 | MS.gene019701:intron | 30.0% | |
| AGAGACATGAAAACTTAATC+AGG | + | chr8.1:73119551-73119570 | MS.gene019701:intron | 30.0% | |
| AGATGAAAAGAAGGATCTAT+TGG | - | chr8.1:73118992-73119011 | None:intergenic | 30.0% | |
| ATGGAGAGTAGATTAAATGA+AGG | + | chr8.1:73117248-73117267 | MS.gene019701:intron | 30.0% | |
| CATGATAGTAGATGAAAAGA+AGG | - | chr8.1:73119001-73119020 | None:intergenic | 30.0% | |
| CATTTCTGTCATCACTTAAA+CGG | - | chr8.1:73118403-73118422 | None:intergenic | 30.0% | |
| CTATAGTTATATCATCGCTA+AGG | - | chr8.1:73119871-73119890 | None:intergenic | 30.0% | |
| CTCCATACTACAAAATCTAT+AGG | - | chr8.1:73117234-73117253 | None:intergenic | 30.0% | |
| CTGAGAAATATATCAATGTG+AGG | + | chr8.1:73119460-73119479 | MS.gene019701:intron | 30.0% | |
| CTTATGTCTTCAGTGAAATT+TGG | + | chr8.1:73117931-73117950 | MS.gene019701:intron | 30.0% | |
| GAAAATTGTTTACTTTCCAG+GGG | + | chr8.1:73119020-73119039 | MS.gene019701:intron | 30.0% | |
| GCAAAATATTGGATTCTCAT+TGG | + | chr8.1:73117757-73117776 | MS.gene019701:intron | 30.0% | |
| GGAAGATATATGAAATACGA+AGG | - | chr8.1:73119830-73119849 | None:intergenic | 30.0% | |
| GTAAGGTGAACATTCTTATA+TGG | + | chr8.1:73119798-73119817 | MS.gene019701:intron | 30.0% | |
| GTTGATCAAAATGATTATGG+TGG | + | chr8.1:73116909-73116928 | MS.gene019701:intron | 30.0% | |
| GTTGCTGTAAAACTAATTTC+GGG | - | chr8.1:73117685-73117704 | None:intergenic | 30.0% | |
| GTTGTTGCTAATACAATTTC+AGG | + | chr8.1:73117415-73117434 | MS.gene019701:intron | 30.0% | |
| TAAAACCACACCAAAGAAAA+AGG | - | chr8.1:73119311-73119330 | None:intergenic | 30.0% | |
| TACTTCAATCTACTATTGGA+AGG | + | chr8.1:73120208-73120227 | MS.gene019701:intron | 30.0% | |
| TATGCTTATAGGAATTTGTG+TGG | + | chr8.1:73120185-73120204 | MS.gene019701:intron | 30.0% | |
| TCTCCAATGAATTATTAGCT+TGG | + | chr8.1:73119243-73119262 | MS.gene019701:intron | 30.0% | |
| TGAGAATAAAATCAACGTAG+CGG | + | chr8.1:73117066-73117085 | MS.gene019701:intron | 30.0% | |
| TGTACTTCTAACTGATATTG+TGG | + | chr8.1:73118175-73118194 | MS.gene019701:intron | 30.0% | |
| TTTATTACTATGCTCTGCTT+GGG | + | chr8.1:73116764-73116783 | MS.gene019701:intron | 30.0% | |
| ! | AAAAAGGTATGTTGCTATTG+TGG | + | chr8.1:73117546-73117565 | MS.gene019701:intron | 30.0% |
| ! | AAAAGGTATGTTGCTATTGT+GGG | + | chr8.1:73117547-73117566 | MS.gene019701:intron | 30.0% |
| ! | ACTTCTGATTTATTTCTCTG+TGG | + | chr8.1:73120348-73120367 | MS.gene019701:intron | 30.0% |
| ! | AGGTTAATGTCTGAAACATA+AGG | + | chr8.1:73118048-73118067 | MS.gene019701:intron | 30.0% |
| ! | AGTATGAAGAGGTGTAAATA+TGG | - | chr8.1:73117873-73117892 | None:intergenic | 30.0% |
| ! | GACCTATAGATTTTGTAGTA+TGG | + | chr8.1:73117229-73117248 | MS.gene019701:intron | 30.0% |
| ! | GGTTAATGTCTGAAACATAA+GGG | + | chr8.1:73118049-73118068 | MS.gene019701:intron | 30.0% |
| ! | GTATGAAGAGGTGTAAATAT+GGG | - | chr8.1:73117872-73117891 | None:intergenic | 30.0% |
| ! | TTTTATTACTATGCTCTGCT+TGG | + | chr8.1:73116763-73116782 | MS.gene019701:intron | 30.0% |
| !! | ATCATTTTGTTTGTCTGCTT+CGG | - | chr8.1:73119090-73119109 | None:intergenic | 30.0% |
| !! | TAGAAAAGATGGTGGAAAAT+AGG | + | chr8.1:73117178-73117197 | MS.gene019701:intron | 30.0% |
| !! | TTATTTCTATCGGTATGTGT+TGG | + | chr8.1:73120249-73120268 | MS.gene019701:intron | 30.0% |
| !!! | CGTTGATTTTATTCTCATGT+TGG | - | chr8.1:73117063-73117082 | None:intergenic | 30.0% |
| !!! | TTTTTTCGTTTATGGGTTGA+TGG | + | chr8.1:73118586-73118605 | MS.gene019701:intron | 30.0% |
| AAAATAAAGCAGCAGAAACG+TGG | - | chr8.1:73118499-73118518 | None:intergenic | 35.0% | |
| ACCTATAGTAGAAAAGATGG+TGG | + | chr8.1:73117170-73117189 | MS.gene019701:intron | 35.0% | |
| AGACTTTACCTTCTTCTCTA+TGG | + | chr8.1:73119698-73119717 | MS.gene019701:CDS | 35.0% | |
| AGAGGATATAGACAAAAGCT+TGG | - | chr8.1:73118963-73118982 | None:intergenic | 35.0% | |
| AGCACCTATAGTAGAAAAGA+TGG | + | chr8.1:73117167-73117186 | MS.gene019701:intron | 35.0% | |
| AGGATCTATTGGTATTTGAG+AGG | - | chr8.1:73118981-73119000 | None:intergenic | 35.0% | |
| CAACATGCACTATGCAATAA+AGG | - | chr8.1:73119994-73120013 | None:intergenic | 35.0% | |
| CAGACAAACAAAATGATCGA+AGG | + | chr8.1:73119093-73119112 | MS.gene019701:CDS | 35.0% | |
| CGTTTAAGTGATGACAGAAA+TGG | + | chr8.1:73118401-73118420 | MS.gene019701:intron | 35.0% | |
| GAAGTACAACAAACAACAGA+AGG | - | chr8.1:73118163-73118182 | None:intergenic | 35.0% | |
| GATCTGTCTAGAAATTCATC+GGG | - | chr8.1:73118285-73118304 | None:intergenic | 35.0% | |
| GCTAAAAACAAGTTCGACAT+TGG | + | chr8.1:73120447-73120466 | MS.gene019701:CDS | 35.0% | |
| GGATCTGTCTAGAAATTCAT+CGG | - | chr8.1:73118286-73118305 | None:intergenic | 35.0% | |
| GTGGTACTTCAATCTACTAT+TGG | + | chr8.1:73120204-73120223 | MS.gene019701:intron | 35.0% | |
| TCAAATGAGTGTGTGTTCAT+AGG | + | chr8.1:73118930-73118949 | MS.gene019701:intron | 35.0% | |
| TCGTCAAATAGTTGCTATAG+TGG | + | chr8.1:73119954-73119973 | MS.gene019701:intron | 35.0% | |
| TCTCTTTAGGTCACTACAAA+GGG | + | chr8.1:73119664-73119683 | MS.gene019701:intron | 35.0% | |
| TGAACACACACTCATTTGAT+AGG | - | chr8.1:73118929-73118948 | None:intergenic | 35.0% | |
| TGCAGATATGCTTAAAAAGG+CGG | - | chr8.1:73117740-73117759 | None:intergenic | 35.0% | |
| TGTACAACCAAACAAAGCAA+AGG | - | chr8.1:73120300-73120319 | None:intergenic | 35.0% | |
| ! | AAAATAGGCTTAGGTGGTTT+TGG | + | chr8.1:73117193-73117212 | MS.gene019701:intron | 35.0% |
| ! | AACCAATGCTCACAATTTTG+AGG | + | chr8.1:73117476-73117495 | MS.gene019701:intron | 35.0% |
| ! | AATGTCCTTTTTCTTTGGTG+TGG | + | chr8.1:73119303-73119322 | MS.gene019701:intron | 35.0% |
| ! | GACAGGATCAACATCTTTTA+AGG | + | chr8.1:73120162-73120181 | MS.gene019701:CDS | 35.0% |
| ! | GAGCAAATGTCCTTTTTCTT+TGG | + | chr8.1:73119298-73119317 | MS.gene019701:intron | 35.0% |
| ! | TCCACCATCTTTTCTACTAT+AGG | - | chr8.1:73117174-73117193 | None:intergenic | 35.0% |
| ! | TCTAAGAAATAGGAGAGCAT+TGG | - | chr8.1:73119496-73119515 | None:intergenic | 35.0% |
| ! | TTAAAAAACTCAGCTTGCTC+AGG | - | chr8.1:73120525-73120544 | None:intergenic | 35.0% |
| ! | TTCTCTATGGTGATGCTTAT+GGG | + | chr8.1:73119711-73119730 | MS.gene019701:CDS | 35.0% |
| ! | TTGGTAGTAGCATTTCTCAT+CGG | - | chr8.1:73118434-73118453 | None:intergenic | 35.0% |
| !! | CATAGTTGGTAATTGTGCTA+TGG | + | chr8.1:73118088-73118107 | MS.gene019701:intron | 35.0% |
| !! | CTAATTTCGGGTTTAAGGTT+TGG | - | chr8.1:73117673-73117692 | None:intergenic | 35.0% |
| !! | CTTTTGCTACTTGTCTCTTT+AGG | + | chr8.1:73119651-73119670 | MS.gene019701:intron | 35.0% |
| !! | TACAAAAGTACCACTCATGT+TGG | + | chr8.1:73116967-73116986 | MS.gene019701:intron | 35.0% |
| !! | TCAATTTTGGGAATAACCAC+AGG | - | chr8.1:73116666-73116685 | None:intergenic | 35.0% |
| !!! | CGTTTCTGCTGCTTTATTTT+TGG | + | chr8.1:73118499-73118518 | MS.gene019701:intron | 35.0% |
| !!! | CGTTTTTTATGGGGTTTCAA+TGG | + | chr8.1:73118221-73118240 | MS.gene019701:intron | 35.0% |
| AAGCATCACCATAGAGAAGA+AGG | - | chr8.1:73119709-73119728 | None:intergenic | 40.0% | |
| AAGGATAGTCAAATCCCTTG+AGG | + | chr8.1:73117267-73117286 | MS.gene019701:intron | 40.0% | |
| ATCAGAGGATACTATGCGTA+AGG | + | chr8.1:73119781-73119800 | MS.gene019701:CDS | 40.0% | |
| ATTGGATTCTCATTGGGCTT+CGG | + | chr8.1:73117764-73117783 | MS.gene019701:intron | 40.0% | |
| CTGACAGAAGATTTGAGCAA+AGG | - | chr8.1:73120400-73120419 | None:intergenic | 40.0% | |
| CTTCAGAGATTATTGCTGTG+TGG | + | chr8.1:73119619-73119638 | MS.gene019701:intron | 40.0% | |
| GGTGACTAAGGATGAATTGA+TGG | + | chr8.1:73120491-73120510 | MS.gene019701:CDS | 40.0% | |
| GTATAGTTGAAGGATGGTGA+TGG | + | chr8.1:73118637-73118656 | MS.gene019701:intron | 40.0% | |
| GTCCTCAAAATTGTGAGCAT+TGG | - | chr8.1:73117481-73117500 | None:intergenic | 40.0% | |
| GTCTCTTTAGGTCACTACAA+AGG | + | chr8.1:73119663-73119682 | MS.gene019701:intron | 40.0% | |
| GTGGTAAGACTAGATAGGAT+AGG | + | chr8.1:73117113-73117132 | MS.gene019701:intron | 40.0% | |
| GTTGTATGGAACTGAGTGTT+GGG | + | chr8.1:73117027-73117046 | MS.gene019701:intron | 40.0% | |
| TATCAATGTGAGGACAGGAT+AGG | + | chr8.1:73119470-73119489 | MS.gene019701:intron | 40.0% | |
| TGAACAACCATATGAGCCAT+CGG | - | chr8.1:73120127-73120146 | None:intergenic | 40.0% | |
| TGGTTGTAAAGATGAGGAAG+AGG | + | chr8.1:73118606-73118625 | MS.gene019701:intron | 40.0% | |
| TGTGGGCAATAGAAAATGAC+AGG | + | chr8.1:73117564-73117583 | MS.gene019701:intron | 40.0% | |
| TGTTGTATGGAACTGAGTGT+TGG | + | chr8.1:73117026-73117045 | MS.gene019701:intron | 40.0% | |
| TTAAAAAGGCGGCTACAAAG+TGG | - | chr8.1:73117729-73117748 | None:intergenic | 40.0% | |
| TTGGCTGTATAGTTGAAGGA+TGG | + | chr8.1:73118631-73118650 | MS.gene019701:intron | 40.0% | |
| TTTATGGGGTTTCAATGGCT+AGG | + | chr8.1:73118226-73118245 | MS.gene019701:intron | 40.0% | |
| TTTCAATGGCTAGGTTTCGA+TGG | + | chr8.1:73118235-73118254 | MS.gene019701:intron | 40.0% | |
| ! | AAAGTACCACTCATGTTGGA+GGG | + | chr8.1:73116971-73116990 | MS.gene019701:intron | 40.0% |
| ! | CAAATGCGAGGACTTTGTTT+GGG | + | chr8.1:73120470-73120489 | MS.gene019701:CDS | 40.0% |
| ! | CTTCTCTATGGTGATGCTTA+TGG | + | chr8.1:73119710-73119729 | MS.gene019701:CDS | 40.0% |
| ! | TAAAGATGAGGAAGAGGTGT+TGG | + | chr8.1:73118612-73118631 | MS.gene019701:intron | 40.0% |
| ! | TCTCTATGGTGATGCTTATG+GGG | + | chr8.1:73119712-73119731 | MS.gene019701:CDS | 40.0% |
| ! | TGATGGATATGGCAGGTATT+CGG | + | chr8.1:73118678-73118697 | MS.gene019701:intron | 40.0% |
| ! | TTGTAGGCCTTTGCTTTGTT+TGG | + | chr8.1:73120290-73120309 | MS.gene019701:intron | 40.0% |
| ! | TTGTTTACGGGCTAAACAAG+TGG | - | chr8.1:73118876-73118895 | None:intergenic | 40.0% |
| !! | AAAAGTACCACTCATGTTGG+AGG | + | chr8.1:73116970-73116989 | MS.gene019701:intron | 40.0% |
| !! | AGATGGTGGAAAATAGGCTT+AGG | + | chr8.1:73117184-73117203 | MS.gene019701:intron | 40.0% |
| !! | CGTAAGTTGATCTATGTAGC+CGG | + | chr8.1:73117362-73117381 | MS.gene019701:intron | 40.0% |
| !! | CTTCCGGTGTTGTTAAATAG+CGG | + | chr8.1:73119845-73119864 | MS.gene019701:intron | 40.0% |
| !! | GAGGGCATTTAGGAAAGATT+TGG | + | chr8.1:73117292-73117311 | MS.gene019701:intron | 40.0% |
| !! | GATGGAGGTTTTGATGGATA+TGG | + | chr8.1:73118667-73118686 | MS.gene019701:intron | 40.0% |
| !! | GGTTGATGGTTGTAAAGATG+AGG | + | chr8.1:73118600-73118619 | MS.gene019701:intron | 40.0% |
| !! | GGTTTAGATGGAGGTTTTGA+TGG | + | chr8.1:73118661-73118680 | MS.gene019701:intron | 40.0% |
| !! | TTTTCTGGAAAATGCCACAC+AGG | - | chr8.1:73119752-73119771 | None:intergenic | 40.0% |
| !!! | GCTGCTTTATTTTTGGCTAC+CGG | + | chr8.1:73118506-73118525 | MS.gene019701:intron | 40.0% |
| AAATGCTCCGATGGCTCATA+TGG | + | chr8.1:73120117-73120136 | MS.gene019701:CDS | 45.0% | |
| AAGTACCACTCATGTTGGAG+GGG | + | chr8.1:73116972-73116991 | MS.gene019701:intron | 45.0% | |
| AATTTCCCCTCCAACATGAG+TGG | - | chr8.1:73116980-73116999 | None:intergenic | 45.0% | |
| ACAGATCCGATGCAAGGTAT+GGG | + | chr8.1:73118298-73118317 | MS.gene019701:intron | 45.0% | |
| AGGCCGCTATTTAACAACAC+CGG | - | chr8.1:73119851-73119870 | None:intergenic | 45.0% | |
| AGGTATGGGTACTCAAGAGT+AGG | + | chr8.1:73118312-73118331 | MS.gene019701:intron | 45.0% | |
| ATGCTGTCCTCATCTTCCTT+TGG | + | chr8.1:73119272-73119291 | MS.gene019701:intron | 45.0% | |
| CAATCTCTCAAACAGCACAG+AGG | - | chr8.1:73116643-73116662 | None:intergenic | 45.0% | |
| GACGTGTGGTAAGACTAGAT+AGG | + | chr8.1:73117108-73117127 | MS.gene019701:intron | 45.0% | |
| GATCCTGTCTGCTCTTCTTT+AGG | - | chr8.1:73120151-73120170 | None:intergenic | 45.0% | |
| GATGGATATGGCAGGTATTC+GGG | + | chr8.1:73118679-73118698 | MS.gene019701:intron | 45.0% | |
| GCAAATGCGAGGACTTTGTT+TGG | + | chr8.1:73120469-73120488 | MS.gene019701:CDS | 45.0% | |
| GTAAGATCGGCGATGTTGTA+TGG | + | chr8.1:73117013-73117032 | MS.gene019701:intron | 45.0% | |
| TACGGCATGAGTAGACAAAC+TGG | - | chr8.1:73117503-73117522 | None:intergenic | 45.0% | |
| TCTGCGTTGAAATCAGTCGT+AGG | + | chr8.1:73120067-73120086 | MS.gene019701:CDS | 45.0% | |
| TGAGTACCCATACCTTGCAT+CGG | - | chr8.1:73118307-73118326 | None:intergenic | 45.0% | |
| TGCTCTGCTTGGGTTTGAAT+TGG | + | chr8.1:73116774-73116793 | MS.gene019701:intron | 45.0% | |
| TGGTGGAAAATAGGCTTAGG+TGG | + | chr8.1:73117187-73117206 | MS.gene019701:intron | 45.0% | |
| TGTTTACTTTCCAGGGGGAA+AGG | + | chr8.1:73119026-73119045 | MS.gene019701:intron | 45.0% | |
| TTCTAGACAGATCCGATGCA+AGG | + | chr8.1:73118292-73118311 | MS.gene019701:CDS | 45.0% | |
| ! | CAATCAAGCCTTTTCCGACT+AGG | - | chr8.1:73117393-73117412 | None:intergenic | 45.0% |
| ! | GGACTTTGTTTGGGTGACTA+AGG | + | chr8.1:73120479-73120498 | MS.gene019701:CDS | 45.0% |
| ! | TCGCTGGATGAAGGTTTTCA+TGG | + | chr8.1:73118734-73118753 | MS.gene019701:intron | 45.0% |
| ! | TTTTGTCGGAAATGCTCCGA+TGG | + | chr8.1:73120108-73120127 | MS.gene019701:CDS | 45.0% |
| !! | GAGGTTTTGATGGATATGGC+AGG | + | chr8.1:73118671-73118690 | MS.gene019701:intron | 45.0% |
| !! | GATGGTGATGGTGGTTTAGA+TGG | + | chr8.1:73118649-73118668 | MS.gene019701:intron | 45.0% |
| !! | GGTGTTGGCTGTATAGTTGA+AGG | + | chr8.1:73118627-73118646 | MS.gene019701:intron | 45.0% |
| !! | GTATTCAGCTCTAGCTTGCT+TGG | - | chr8.1:73117850-73117869 | None:intergenic | 45.0% |
| !! | TAGTTGAAGGATGGTGATGG+TGG | + | chr8.1:73118640-73118659 | MS.gene019701:intron | 45.0% |
| !! | AAATTTGTATTAATTTATTA+CGG | - | chr8.1:73117521-73117540 | None:intergenic | 5.0% |
| AGGACATTTGCTCGCTCCAA+AGG | - | chr8.1:73119291-73119310 | None:intergenic | 50.0% | |
| AGTCAAATCCCTTGAGGCAG+AGG | + | chr8.1:73117273-73117292 | MS.gene019701:intron | 50.0% | |
| CAATGGCTAGGTTTCGATGG+CGG | + | chr8.1:73118238-73118257 | MS.gene019701:intron | 50.0% | |
| CAGCCTAAAGAAGAGCAGAC+AGG | + | chr8.1:73120145-73120164 | MS.gene019701:CDS | 50.0% | |
| CTAAATGCCCTCTGCCTCAA+GGG | - | chr8.1:73117284-73117303 | None:intergenic | 50.0% | |
| CTGATAATCACCTTTCCCCC+TGG | - | chr8.1:73119039-73119058 | None:intergenic | 50.0% | |
| GACAGATCCGATGCAAGGTA+TGG | + | chr8.1:73118297-73118316 | MS.gene019701:intron | 50.0% | |
| GCTGTTTGAGAGATTGCCTG+TGG | + | chr8.1:73116647-73116666 | MS.gene019701:CDS | 50.0% | |
| GTCAAATCCCTTGAGGCAGA+GGG | + | chr8.1:73117274-73117293 | MS.gene019701:intron | 50.0% | |
| GTGAACACACGCGCATGTAT+TGG | + | chr8.1:73118472-73118491 | MS.gene019701:intron | 50.0% | |
| GTTCGACATTGGCAAATGCG+AGG | + | chr8.1:73120458-73120477 | MS.gene019701:CDS | 50.0% | |
| TATGGCAGGTATTCGGGAAG+TGG | + | chr8.1:73118685-73118704 | MS.gene019701:intron | 50.0% | |
| TGGTGGTTGAAATGGAGACG+AGG | + | chr8.1:73116926-73116945 | MS.gene019701:intron | 50.0% | |
| TTGAAATGGAGACGAGGCTC+TGG | + | chr8.1:73116932-73116951 | MS.gene019701:intron | 50.0% | |
| TTGTCTGCTTCGGTGATTCG+CGG | - | chr8.1:73119080-73119099 | None:intergenic | 50.0% | |
| ! | AAATCAACGTAGCGGAGACG+AGG | + | chr8.1:73117074-73117093 | MS.gene019701:intron | 50.0% |
| ! | CAAGCCTTTTCCGACTAGGT+GGG | - | chr8.1:73117389-73117408 | None:intergenic | 50.0% |
| ! | CTGTGTAGTGTTGCTATCGC+TGG | + | chr8.1:73118718-73118737 | MS.gene019701:intron | 50.0% |
| ! | GTGTTGCTATCGCTGGATGA+AGG | + | chr8.1:73118725-73118744 | MS.gene019701:intron | 50.0% |
| ! | TCAAGCCTTTTCCGACTAGG+TGG | - | chr8.1:73117390-73117409 | None:intergenic | 50.0% |
| !! | GGTGATGGTGGTTTAGATGG+AGG | + | chr8.1:73118652-73118671 | MS.gene019701:intron | 50.0% |
| !! | GTATGGAACTGAGTGTTGGG+AGG | + | chr8.1:73117030-73117049 | MS.gene019701:intron | 50.0% |
| AGGATGTTGCGTTGGACGTG+TGG | + | chr8.1:73117094-73117113 | MS.gene019701:intron | 55.0% | |
| CCTAAATGCCCTCTGCCTCA+AGG | - | chr8.1:73117285-73117304 | None:intergenic | 55.0% | |
| CTCCAAGTGGAAAGCCTGTG+TGG | + | chr8.1:73119735-73119754 | MS.gene019701:CDS | 55.0% | |
| GATGCTTATGGGGCTCCAAG+TGG | + | chr8.1:73119722-73119741 | MS.gene019701:CDS | 55.0% | |
| GCAGGTATTCGGGAAGTGGA+CGG | + | chr8.1:73118689-73118708 | MS.gene019701:intron | 55.0% | |
| GCTCGCTCCAAAGGAAGATG+AGG | - | chr8.1:73119282-73119301 | None:intergenic | 55.0% | |
| TATTCGGGAAGTGGACGGTG+AGG | + | chr8.1:73118694-73118713 | MS.gene019701:intron | 55.0% | |
| TGCCACACAGGCTTTCCACT+TGG | - | chr8.1:73119740-73119759 | None:intergenic | 55.0% | |
| ! | CTTTTCCGACTAGGTGGGTC+CGG | - | chr8.1:73117384-73117403 | None:intergenic | 55.0% |
| ! | GTGTGTTCACGAGAGAGCGT+TGG | - | chr8.1:73118462-73118481 | None:intergenic | 55.0% |
| !! | CCTTGAGGCAGAGGGCATTT+AGG | + | chr8.1:73117282-73117301 | MS.gene019701:intron | 55.0% |
| CGGACCCACCTAGTCGGAAA+AGG | + | chr8.1:73117382-73117401 | MS.gene019701:intron | 60.0% | |
| CGGAGACGAGGATGTTGCGT+TGG | + | chr8.1:73117086-73117105 | MS.gene019701:intron | 60.0% | |
| TGTAGCCGGACCCACCTAGT+CGG | + | chr8.1:73117376-73117395 | MS.gene019701:intron | 60.0% | |
| !! | CGAGAGAGCGTTGGAGCGTT+TGG | - | chr8.1:73118453-73118472 | None:intergenic | 60.0% |
| GCTTCGGTGATTCGCGGTGC+TGG | - | chr8.1:73119074-73119093 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 73116633 | 73120563 | 73116633 | ID=MS.gene019701 |
| chr8.1 | mRNA | 73116633 | 73120563 | 73116633 | ID=MS.gene019701.t1;Parent=MS.gene019701 |
| chr8.1 | exon | 73116633 | 73116715 | 73116633 | ID=MS.gene019701.t1.exon1;Parent=MS.gene019701.t1 |
| chr8.1 | CDS | 73116633 | 73116715 | 73116633 | ID=cds.MS.gene019701.t1;Parent=MS.gene019701.t1 |
| chr8.1 | exon | 73118248 | 73118313 | 73118248 | ID=MS.gene019701.t1.exon2;Parent=MS.gene019701.t1 |
| chr8.1 | CDS | 73118248 | 73118313 | 73118248 | ID=cds.MS.gene019701.t1;Parent=MS.gene019701.t1 |
| chr8.1 | exon | 73119040 | 73119114 | 73119040 | ID=MS.gene019701.t1.exon3;Parent=MS.gene019701.t1 |
| chr8.1 | CDS | 73119040 | 73119114 | 73119040 | ID=cds.MS.gene019701.t1;Parent=MS.gene019701.t1 |
| chr8.1 | exon | 73119673 | 73119802 | 73119673 | ID=MS.gene019701.t1.exon4;Parent=MS.gene019701.t1 |
| chr8.1 | CDS | 73119673 | 73119802 | 73119673 | ID=cds.MS.gene019701.t1;Parent=MS.gene019701.t1 |
| chr8.1 | exon | 73120058 | 73120183 | 73120058 | ID=MS.gene019701.t1.exon5;Parent=MS.gene019701.t1 |
| chr8.1 | CDS | 73120058 | 73120183 | 73120058 | ID=cds.MS.gene019701.t1;Parent=MS.gene019701.t1 |
| chr8.1 | exon | 73120420 | 73120563 | 73120420 | ID=MS.gene019701.t1.exon6;Parent=MS.gene019701.t1 |
| chr8.1 | CDS | 73120420 | 73120563 | 73120420 | ID=cds.MS.gene019701.t1;Parent=MS.gene019701.t1 |
| Gene Sequence |
| Protein sequence |
