Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21110.t1 | XP_024628068.1 | 98.9 | 266 | 3 | 0 | 1 | 266 | 1 | 266 | 1.40E-130 | 475.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21110.t1 | A7IPQ1 | 43.0 | 149 | 80 | 4 | 65 | 211 | 3 | 148 | 1.3e-20 | 101.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21110.t1 | A0A072VEX9 | 98.9 | 266 | 3 | 0 | 1 | 266 | 1 | 266 | 1.0e-130 | 475.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21110.t1 | MTR_1g031890 | 98.872 | 266 | 3 | 0 | 1 | 266 | 1 | 266 | 0.0 | 529 |
| MS.gene21110.t1 | MTR_1g031890 | 98.872 | 266 | 3 | 0 | 1 | 266 | 1 | 266 | 0.0 | 529 |
| MS.gene21110.t1 | MTR_1g085490 | 98.496 | 266 | 4 | 0 | 1 | 266 | 1 | 266 | 0.0 | 528 |
| MS.gene21110.t1 | MTR_4g118060 | 97.744 | 266 | 6 | 0 | 1 | 266 | 1 | 266 | 0.0 | 524 |
| MS.gene21110.t1 | MTR_1g031890 | 97.938 | 194 | 4 | 0 | 1 | 194 | 1 | 194 | 1.16e-137 | 385 |
| MS.gene21110.t1 | MTR_1g110750 | 31.977 | 172 | 102 | 7 | 74 | 233 | 78 | 246 | 9.35e-12 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21110.t1 | AT5G64670 | 74.182 | 275 | 54 | 5 | 1 | 266 | 1 | 267 | 2.74e-138 | 390 |
| MS.gene21110.t1 | AT3G25920 | 30.667 | 225 | 128 | 11 | 5 | 211 | 19 | 233 | 5.72e-13 | 67.8 |
Find 0 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATAATATTCAAAACTAT+AGG | - | 10911:26321-26340 | None:intergenic | 10.0% |
| !! | AACAAAAAAGATATATAAAC+AGG | - | 10911:26169-26188 | None:intergenic | 15.0% |
| !! | GAGATAAATAAATGTAAAAT+TGG | + | 10911:27874-27893 | MS.gene21110:intron | 15.0% |
| !!! | AAGATAAGATTTTTATTTCA+AGG | + | 10911:26588-26607 | MS.gene21110:intron | 15.0% |
| !!! | ATTATAATTCTGAGATTTAT+GGG | + | 10911:26333-26352 | MS.gene21110:intron | 15.0% |
| !!! | TAAGTATTTCTAAAGATTTA+AGG | - | 10911:27489-27508 | None:intergenic | 15.0% |
| !!! | TATTATAATTCTGAGATTTA+TGG | + | 10911:26332-26351 | MS.gene21110:intron | 15.0% |
| !! | AAATCTTCTGTAAACATATA+TGG | + | 10911:26617-26636 | MS.gene21110:intron | 20.0% |
| !! | ATAATAAACAAAAGAATGAG+AGG | - | 10911:27294-27313 | None:intergenic | 20.0% |
| !! | TAATAAACAAAAGAATGAGA+GGG | - | 10911:27293-27312 | None:intergenic | 20.0% |
| !! | TGAACTCTAATAATATACTA+AGG | - | 10911:26278-26297 | None:intergenic | 20.0% |
| !! | TTATTATTATTACCATACAC+AGG | + | 10911:27307-27326 | MS.gene21110:intron | 20.0% |
| !!! | AAACAAATTCATTTTAAGTG+AGG | - | 10911:27258-27277 | None:intergenic | 20.0% |
| !!! | ATCCTTTTTAATAATATTCC+TGG | - | 10911:26484-26503 | None:intergenic | 20.0% |
| !!! | TTTATTGTATTGACATTTGA+CGG | + | 10911:26765-26784 | MS.gene21110:intron | 20.0% |
| !!! | TTTTCAATTCTAAACACTTA+AGG | + | 10911:27902-27921 | MS.gene21110:intron | 20.0% |
| ! | AAACTTTATAGGCATATAAG+AGG | + | 10911:27945-27964 | MS.gene21110:intron | 25.0% |
| ! | AACTTTATAGGCATATAAGA+GGG | + | 10911:27946-27965 | MS.gene21110:intron | 25.0% |
| ! | AAGGATAAAGAACAAAATGT+TGG | + | 10911:27677-27696 | MS.gene21110:intron | 25.0% |
| ! | AAGGTGTATTACAATAAGTT+AGG | + | 10911:28054-28073 | MS.gene21110:CDS | 25.0% |
| ! | AATGTCTAGATAAGTTTATG+TGG | + | 10911:26985-27004 | MS.gene21110:intron | 25.0% |
| ! | AATTGACATGTAGAAATAAG+AGG | - | 10911:26679-26698 | None:intergenic | 25.0% |
| ! | ACTGATAGATTGAGAAATAA+AGG | - | 10911:27084-27103 | None:intergenic | 25.0% |
| ! | ATTACAATAAGTTAGGCTTT+CGG | + | 10911:28061-28080 | MS.gene21110:CDS | 25.0% |
| ! | CTAAAGATTTAAGGATCAAA+AGG | - | 10911:27480-27499 | None:intergenic | 25.0% |
| ! | CTCCAGGAATATTATTAAAA+AGG | + | 10911:26479-26498 | MS.gene21110:intron | 25.0% |
| ! | CTGATAGATTGAGAAATAAA+GGG | - | 10911:27083-27102 | None:intergenic | 25.0% |
| ! | GAGTTCATTAGTTATAATTG+TGG | + | 10911:26291-26310 | MS.gene21110:intron | 25.0% |
| ! | TAAAATTTCTGTAGTGTCTA+AGG | + | 10911:27658-27677 | MS.gene21110:intron | 25.0% |
| ! | TAATAATATTCCTGGAGAAA+TGG | - | 10911:26476-26495 | None:intergenic | 25.0% |
| ! | TATACAGTCACAAACTTTAT+AGG | + | 10911:27934-27953 | MS.gene21110:intron | 25.0% |
| ! | TGATAGATTGAGAAATAAAG+GGG | - | 10911:27082-27101 | None:intergenic | 25.0% |
| ! | TTGTAACATATTGAGTTTAC+AGG | + | 10911:27972-27991 | MS.gene21110:intron | 25.0% |
| !!! | CTAAGTAATAAGTGTTTTTG+AGG | + | 10911:27442-27461 | MS.gene21110:intron | 25.0% |
| !!! | GTATGTATACTTTGATTTGA+AGG | + | 10911:27419-27438 | MS.gene21110:intron | 25.0% |
| !!! | TCAACTTTATCCTTTTGTTT+TGG | - | 10911:28153-28172 | None:intergenic | 25.0% |
| !!! | TTTTTAGTGCATATCATACT+TGG | - | 10911:26703-26722 | None:intergenic | 25.0% |
| AAAGATGGAGTAAGATTGAT+GGG | + | 10911:27356-27375 | MS.gene21110:CDS | 30.0% | |
| ACTTTATAGGCATATAAGAG+GGG | + | 10911:27947-27966 | MS.gene21110:intron | 30.0% | |
| ATACATACCTCTAGATGAAT+TGG | - | 10911:27407-27426 | None:intergenic | 30.0% | |
| ATGTTGCCAAAGTTAAAACA+TGG | - | 10911:27628-27647 | None:intergenic | 30.0% | |
| ATTATCTCTCAGATCATTCA+AGG | - | 10911:25946-25965 | None:intergenic | 30.0% | |
| ATTCTAAACACTTAAGGTGT+AGG | + | 10911:27908-27927 | MS.gene21110:intron | 30.0% | |
| ATTCTTCTGTGTATTTAACC+GGG | + | 10911:26200-26219 | MS.gene21110:intron | 30.0% | |
| ATTGAGTTTACAGGTAACAA+GGG | + | 10911:27981-28000 | MS.gene21110:intron | 30.0% | |
| ATTGCAACATTTATCAATGC+TGG | + | 10911:27173-27192 | MS.gene21110:CDS | 30.0% | |
| ATTGTAATACACCTTTCTGA+CGG | - | 10911:28049-28068 | None:intergenic | 30.0% | |
| CACACACAGTTAAAATACAT+TGG | - | 10911:26798-26817 | None:intergenic | 30.0% | |
| CCATGCTTAATGCAAATATT+AGG | + | 10911:26536-26555 | MS.gene21110:intron | 30.0% | |
| CCTAATATTTGCATTAAGCA+TGG | - | 10911:26539-26558 | None:intergenic | 30.0% | |
| GATTCTTCTGTGTATTTAAC+CGG | + | 10911:26199-26218 | MS.gene21110:intron | 30.0% | |
| TAAAGATGGAGTAAGATTGA+TGG | + | 10911:27355-27374 | MS.gene21110:CDS | 30.0% | |
| TATTGAGTTTACAGGTAACA+AGG | + | 10911:27980-27999 | MS.gene21110:intron | 30.0% | |
| TCAAGCAGAATAGTCTTTAT+TGG | - | 10911:26432-26451 | None:intergenic | 30.0% | |
| TTACAATAAGTTAGGCTTTC+GGG | + | 10911:28062-28081 | MS.gene21110:CDS | 30.0% | |
| ! | AATGGTTTTCTTTCTTGGAA+TGG | - | 10911:26458-26477 | None:intergenic | 30.0% |
| ! | AATTCTGAAAAAGTCTCAGA+TGG | - | 10911:26388-26407 | None:intergenic | 30.0% |
| ! | TAAAATGGAATTGGCTTCTT+CGG | - | 10911:28198-28217 | None:intergenic | 30.0% |
| ! | TTTAACTTTGGCAACATGAA+TGG | + | 10911:27631-27650 | MS.gene21110:intron | 30.0% |
| ! | TTTCTTCTTTTACAGCCAAT+AGG | + | 10911:27140-27159 | MS.gene21110:intron | 30.0% |
| !! | AAGAACAAAATGTTGGCTTT+AGG | + | 10911:27684-27703 | MS.gene21110:intron | 30.0% |
| !! | AAGGATAAAGTTGATAGCAT+TGG | + | 10911:28159-28178 | MS.gene21110:CDS | 30.0% |
| !! | ATAAAGTTGATAGCATTGGA+CGG | + | 10911:28163-28182 | MS.gene21110:CDS | 30.0% |
| !! | ATAATTCTGAGATTTATGGG+TGG | + | 10911:26336-26355 | MS.gene21110:intron | 30.0% |
| !! | ATTCATTTTAAGTGAGGAAG+CGG | - | 10911:27252-27271 | None:intergenic | 30.0% |
| !! | CTCTAAAACCTTGAAAATCT+GGG | - | 10911:25908-25927 | None:intergenic | 30.0% |
| !!! | ACTTTATCCTTTTGTTTTGG+AGG | - | 10911:28150-28169 | None:intergenic | 30.0% |
| !!! | TTTTGAGCTTATTTTGATGC+TGG | + | 10911:27541-27560 | MS.gene21110:intron | 30.0% |
| AAGATGGAGTAAGATTGATG+GGG | + | 10911:27357-27376 | MS.gene21110:CDS | 35.0% | |
| AAGGGATGAAATTGGATAGA+CGG | - | 10911:25834-25853 | None:intergenic | 35.0% | |
| AGAAAGAAAACCATTTCTCC+AGG | + | 10911:26463-26482 | MS.gene21110:intron | 35.0% | |
| AGATTGAGAAATAAAGGGGA+AGG | - | 10911:27078-27097 | None:intergenic | 35.0% | |
| AGCAAACATTAGATAGCCAA+TGG | - | 10911:26233-26252 | None:intergenic | 35.0% | |
| ATGGTTTACACTTGCCAAAA+GGG | - | 10911:27590-27609 | None:intergenic | 35.0% | |
| CAAGTGTAAACCATCAAAAG+TGG | + | 10911:27596-27615 | MS.gene21110:intron | 35.0% | |
| CTTGACACTCATAAATCTGA+AGG | - | 10911:26888-26907 | None:intergenic | 35.0% | |
| CTTGGGAAGCAAATTAAAGA+TGG | + | 10911:27341-27360 | MS.gene21110:CDS | 35.0% | |
| GAGTGTCAAGTAACTTCTAA+GGG | + | 10911:26898-26917 | MS.gene21110:intron | 35.0% | |
| GATCACAATGAAAACACTCA+AGG | + | 10911:27217-27236 | MS.gene21110:CDS | 35.0% | |
| TGAGTGTCAAGTAACTTCTA+AGG | + | 10911:26897-26916 | MS.gene21110:intron | 35.0% | |
| TGGTTACTTGTGAGCAATAA+TGG | + | 10911:26356-26375 | MS.gene21110:intron | 35.0% | |
| TGTAAACATATATGGCTGAG+TGG | + | 10911:26625-26644 | MS.gene21110:intron | 35.0% | |
| ! | AGAAGTATACCTGAAAAGTG+AGG | - | 10911:26145-26164 | None:intergenic | 35.0% |
| ! | CTTTCCTTGTCTTCTGTTTT+CGG | - | 10911:25974-25993 | None:intergenic | 35.0% |
| ! | CTTTTACAGCCAATAGGTTT+GGG | + | 10911:27146-27165 | MS.gene21110:intron | 35.0% |
| ! | GCAATTTTTCCCAAACCTAT+TGG | - | 10911:27158-27177 | None:intergenic | 35.0% |
| ! | GGAGAAATGGTTTTCTTTCT+TGG | - | 10911:26463-26482 | None:intergenic | 35.0% |
| ! | TATCTAATGTTTGCTGCATC+AGG | + | 10911:26238-26257 | MS.gene21110:intron | 35.0% |
| ! | TCTTTTACAGCCAATAGGTT+TGG | + | 10911:27145-27164 | MS.gene21110:intron | 35.0% |
| ! | TTTCCTTGTCTTCTGTTTTC+GGG | - | 10911:25973-25992 | None:intergenic | 35.0% |
| !! | ATAAGTGTTTTTGAGGACCA+CGG | + | 10911:27449-27468 | MS.gene21110:intron | 35.0% |
| !! | GCTCTAAAACCTTGAAAATC+TGG | - | 10911:25909-25928 | None:intergenic | 35.0% |
| !! | TCGATTTTGCTATGAAGAGT+TGG | + | 10911:27717-27736 | MS.gene21110:intron | 35.0% |
| !!! | TGACAGCCATGTTTTAACTT+TGG | + | 10911:27619-27638 | MS.gene21110:intron | 35.0% |
| !!! | TTATCCTTTTGTTTTGGAGG+AGG | - | 10911:28147-28166 | None:intergenic | 35.0% |
| !!! | TTTTAGAGCTTACAGTCTTC+TGG | + | 10911:25920-25939 | MS.gene21110:CDS | 35.0% |
| AAAGATACGAGCTTGAACCA+CGG | - | 10911:27035-27054 | None:intergenic | 40.0% | |
| ACCTGAAAAGTGAGGCTAAA+TGG | - | 10911:26137-26156 | None:intergenic | 40.0% | |
| ACTCACAACAAATCCGTTCT+CGG | + | 10911:25804-25823 | MS.gene21110:CDS | 40.0% | |
| AGGGATGAAATTGGATAGAC+GGG | - | 10911:25833-25852 | None:intergenic | 40.0% | |
| ATTACCATACACAGGATGCA+GGG | + | 10911:27315-27334 | MS.gene21110:intron | 40.0% | |
| CCTGAAAAGTGAGGCTAAAT+GGG | - | 10911:26136-26155 | None:intergenic | 40.0% | |
| CGAAAACAGAAGACAAGGAA+AGG | + | 10911:25972-25991 | MS.gene21110:CDS | 40.0% | |
| GATGGTTTACACTTGCCAAA+AGG | - | 10911:27591-27610 | None:intergenic | 40.0% | |
| GCCAAAGTGAACTACACATT+TGG | - | 10911:26854-26873 | None:intergenic | 40.0% | |
| GCCAAATGTGTAGTTCACTT+TGG | + | 10911:26850-26869 | MS.gene21110:intron | 40.0% | |
| TAGACCTCCTCCAAAACAAA+AGG | + | 10911:28140-28159 | MS.gene21110:CDS | 40.0% | |
| TATTACCATACACAGGATGC+AGG | + | 10911:27314-27333 | MS.gene21110:intron | 40.0% | |
| TGAAAATCTGGGTGAGCATT+GGG | - | 10911:25897-25916 | None:intergenic | 40.0% | |
| TTCAGCTTCACAATGATGCT+CGG | - | 10911:26513-26532 | None:intergenic | 40.0% | |
| TTGAAAATCTGGGTGAGCAT+TGG | - | 10911:25898-25917 | None:intergenic | 40.0% | |
| ! | AATGCTCACCCAGATTTTCA+AGG | + | 10911:25897-25916 | MS.gene21110:CDS | 40.0% |
| ! | TTCCTTGTCTTCTGTTTTCG+GGG | - | 10911:25972-25991 | None:intergenic | 40.0% |
| !! | GTGAGCATTGGGATTAAATG+TGG | - | 10911:25886-25905 | None:intergenic | 40.0% |
| AAAGGGGAAGGATACCAAAC+AGG | - | 10911:27066-27085 | None:intergenic | 45.0% | |
| AACCACGTTTAGGCATCCTA+CGG | - | 10911:26106-26125 | None:intergenic | 45.0% | |
| AAGGGGAAGGATACCAAACA+GGG | - | 10911:27065-27084 | None:intergenic | 45.0% | |
| ACAAGGAAAGGTCGTGGTAT+TGG | + | 10911:25984-26003 | MS.gene21110:CDS | 45.0% | |
| AGCCAGGAAAGGTTCAAAGT+TGG | + | 10911:26052-26071 | MS.gene21110:CDS | 45.0% | |
| ATAGCCAATGGTCAAGTTCC+CGG | - | 10911:26221-26240 | None:intergenic | 45.0% | |
| ATCTTTGGACCTTCCCTGTT+TGG | + | 10911:27049-27068 | MS.gene21110:intron | 45.0% | |
| CACGAACGTTGAAAGAGTGA+GGG | - | 10911:25863-25882 | None:intergenic | 45.0% | |
| CCAATGGCCAATTCATCTAG+AGG | + | 10911:27397-27416 | MS.gene21110:CDS | 45.0% | |
| CCAGGAAAGGTTCAAAGTTG+GGG | + | 10911:26054-26073 | MS.gene21110:CDS | 45.0% | |
| CCTCTAGATGAATTGGCCAT+TGG | - | 10911:27400-27419 | None:intergenic | 45.0% | |
| CCTGAGTGGTTTGAGAAGAA+AGG | + | 10911:28096-28115 | MS.gene21110:CDS | 45.0% | |
| CCTTTCTTCTCAAACCACTC+AGG | - | 10911:28099-28118 | None:intergenic | 45.0% | |
| GCCAGGAAAGGTTCAAAGTT+GGG | + | 10911:26053-26072 | MS.gene21110:CDS | 45.0% | |
| GGGTTCTTGAAACCACGTTT+AGG | - | 10911:26116-26135 | None:intergenic | 45.0% | |
| GTGGTTCAAGCTCGTATCTT+TGG | + | 10911:27034-27053 | MS.gene21110:intron | 45.0% | |
| TAGTCATAAATCCCTAGCCG+TGG | + | 10911:27015-27034 | MS.gene21110:intron | 45.0% | |
| TCAGCTTCACAATGATGCTC+GGG | - | 10911:26512-26531 | None:intergenic | 45.0% | |
| TTAACCGGGAACTTGACCAT+TGG | + | 10911:26214-26233 | MS.gene21110:intron | 45.0% | |
| TTACCATACACAGGATGCAG+GGG | + | 10911:27316-27335 | MS.gene21110:intron | 45.0% | |
| TTCCCCGAAAACAGAAGACA+AGG | + | 10911:25967-25986 | MS.gene21110:CDS | 45.0% | |
| ! | AAAGGTCGTGGTATTGGATC+TGG | + | 10911:25990-26009 | MS.gene21110:CDS | 45.0% |
| ! | CAAAAGGGAAAAGAGAGTGC+AGG | - | 10911:27575-27594 | None:intergenic | 45.0% |
| ! | CGTGGTATTGGATCTGGAAA+GGG | + | 10911:25996-26015 | MS.gene21110:CDS | 45.0% |
| ! | CTGCACTCTCTTTTCCCTTT+TGG | + | 10911:27573-27592 | MS.gene21110:intron | 45.0% |
| ! | TCGTGGTATTGGATCTGGAA+AGG | + | 10911:25995-26014 | MS.gene21110:CDS | 45.0% |
| !! | ATGGCTGTCACCACTTTTGA+TGG | - | 10911:27609-27628 | None:intergenic | 45.0% |
| !! | CCCATTTAGCCTCACTTTTC+AGG | + | 10911:26133-26152 | MS.gene21110:CDS | 45.0% |
| !! | GTGGTTCTGAGAAGATCCAA+TGG | + | 10911:27381-27400 | MS.gene21110:CDS | 45.0% |
| AAAGAGTGAGGGAGCTGCAA+GGG | - | 10911:25852-25871 | None:intergenic | 50.0% | |
| AAAGGGAAAGACTGCTGGGA+GGG | + | 10911:26013-26032 | MS.gene21110:CDS | 50.0% | |
| AGGTAACAAGGGTCACTGTC+AGG | + | 10911:27992-28011 | MS.gene21110:intron | 50.0% | |
| CAGAAGACAAGGAAAGGTCG+TGG | + | 10911:25978-25997 | MS.gene21110:CDS | 50.0% | |
| CCCCAACTTTGAACCTTTCC+TGG | - | 10911:26057-26076 | None:intergenic | 50.0% | |
| CTGGAAAGGGAAAGACTGCT+GGG | + | 10911:26009-26028 | MS.gene21110:CDS | 50.0% | |
| GATAGACGGGTATCCGAGAA+CGG | - | 10911:25820-25839 | None:intergenic | 50.0% | |
| GCACGAACGTTGAAAGAGTG+AGG | - | 10911:25864-25883 | None:intergenic | 50.0% | |
| GGAAGGATACCAAACAGGGA+AGG | - | 10911:27061-27080 | None:intergenic | 50.0% | |
| GGAGCTGCAAGGGATGAAAT+TGG | - | 10911:25842-25861 | None:intergenic | 50.0% | |
| GGTAACAAGGGTCACTGTCA+GGG | + | 10911:27993-28012 | MS.gene21110:intron | 50.0% | |
| GGTTCAAAGTTGGGGTTCGA+AGG | + | 10911:26062-26081 | MS.gene21110:CDS | 50.0% | |
| TCAAAGTTGGGGTTCGAAGG+AGG | + | 10911:26065-26084 | MS.gene21110:CDS | 50.0% | |
| TCTGGAAAGGGAAAGACTGC+TGG | + | 10911:26008-26027 | MS.gene21110:CDS | 50.0% | |
| ! | TTGAACCTTTCCTGGCTCTC+TGG | - | 10911:26049-26068 | None:intergenic | 50.0% |
| !! | AGGATCAAAAGGCATCACCG+TGG | - | 10911:27469-27488 | None:intergenic | 50.0% |
| AAAGGCCAGAGAGCCAGGAA+AGG | + | 10911:26041-26060 | MS.gene21110:CDS | 55.0% | |
| AAGCAGTTGAAGCGGCTGGT+GGG | + | 10911:28022-28041 | MS.gene21110:CDS | 55.0% | |
| AAGGAAGCAGTTGAAGCGGC+TGG | + | 10911:28018-28037 | MS.gene21110:CDS | 55.0% | |
| AAGGGAAAGACTGCTGGGAG+GGG | + | 10911:26014-26033 | MS.gene21110:CDS | 55.0% | |
| ACGAGCTTGAACCACGGCTA+GGG | - | 10911:27029-27048 | None:intergenic | 55.0% | |
| AGCCGCTTCAACTGCTTCCT+TGG | - | 10911:28019-28038 | None:intergenic | 55.0% | |
| GAAAGAGTGAGGGAGCTGCA+AGG | - | 10911:25853-25872 | None:intergenic | 55.0% | |
| GAAAGGGAAAGACTGCTGGG+AGG | + | 10911:26012-26031 | MS.gene21110:CDS | 55.0% | |
| GCTGAGTGGCTTGACTGTGT+TGG | + | 10911:26639-26658 | MS.gene21110:intron | 55.0% | |
| GGAGTAAGATTGATGGGGCG+TGG | + | 10911:27362-27381 | MS.gene21110:CDS | 55.0% | |
| GGCCAAGGAAGCAGTTGAAG+CGG | + | 10911:28014-28033 | MS.gene21110:CDS | 55.0% | |
| GTACCCCTGCATCCTGTGTA+TGG | - | 10911:27322-27341 | None:intergenic | 55.0% | |
| TACGAGCTTGAACCACGGCT+AGG | - | 10911:27030-27049 | None:intergenic | 55.0% | |
| TAGGCATCCTACGGCGAAGA+GGG | - | 10911:26097-26116 | None:intergenic | 55.0% | |
| TTAGGCATCCTACGGCGAAG+AGG | - | 10911:26098-26117 | None:intergenic | 55.0% | |
| ! | GGAATTGGCTTCTTCGGAGC+AGG | - | 10911:28192-28211 | None:intergenic | 55.0% |
| ! | GGAGGAGGTCTAGCTGCTTT+AGG | - | 10911:28132-28151 | None:intergenic | 55.0% |
| !! | ACACAGGATGCAGGGGTACT+TGG | + | 10911:27323-27342 | MS.gene21110:intron | 55.0% |
| !! | CACAGGATGCAGGGGTACTT+GGG | + | 10911:27324-27343 | MS.gene21110:intron | 55.0% |
| AAGGGTCACTGTCAGGGCCA+AGG | + | 10911:27999-28018 | MS.gene21110:CDS | 60.0% | |
| ACTGCTGGGAGGGGTCACAA+AGG | + | 10911:26023-26042 | MS.gene21110:CDS | 60.0% | |
| AGGCATCCTACGGCGAAGAG+GGG | - | 10911:26096-26115 | None:intergenic | 60.0% | |
| CGCCGTAGGATGCCTAAACG+TGG | + | 10911:26101-26120 | MS.gene21110:CDS | 60.0% | |
| GAAGCAGTTGAAGCGGCTGG+TGG | + | 10911:28021-28040 | MS.gene21110:CDS | 60.0% | |
| GTCACAAAGGCCAGAGAGCC+AGG | + | 10911:26036-26055 | MS.gene21110:CDS | 60.0% | |
| TCCTACGGCGAAGAGGGGTT+TGG | - | 10911:26091-26110 | None:intergenic | 60.0% | |
| ! | GGGCACTGTTGAAGCCTGAG+TGG | + | 10911:28082-28101 | MS.gene21110:CDS | 60.0% |
| GCCAAACCCCTCTTCGCCGT+AGG | + | 10911:26087-26106 | MS.gene21110:CDS | 65.0% | |
| ! | GGCTGGTGGGTCCGTCAGAA+AGG | + | 10911:28035-28054 | MS.gene21110:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 10911 | gene | 25753 | 28218 | 25753 | ID=MS.gene21110 |
| 10911 | mRNA | 25753 | 28218 | 25753 | ID=MS.gene21110.t1;Parent=MS.gene21110 |
| 10911 | exon | 25753 | 26154 | 25753 | ID=MS.gene21110.t1.exon1;Parent=MS.gene21110.t1 |
| 10911 | CDS | 25753 | 26154 | 25753 | ID=cds.MS.gene21110.t1;Parent=MS.gene21110.t1 |
| 10911 | exon | 27155 | 27238 | 27155 | ID=MS.gene21110.t1.exon2;Parent=MS.gene21110.t1 |
| 10911 | CDS | 27155 | 27238 | 27155 | ID=cds.MS.gene21110.t1;Parent=MS.gene21110.t1 |
| 10911 | exon | 27329 | 27418 | 27329 | ID=MS.gene21110.t1.exon3;Parent=MS.gene21110.t1 |
| 10911 | CDS | 27329 | 27418 | 27329 | ID=cds.MS.gene21110.t1;Parent=MS.gene21110.t1 |
| 10911 | exon | 27994 | 28218 | 27994 | ID=MS.gene21110.t1.exon4;Parent=MS.gene21110.t1 |
| 10911 | CDS | 27994 | 28218 | 27994 | ID=cds.MS.gene21110.t1;Parent=MS.gene21110.t1 |
| Gene Sequence |
| Protein sequence |
