Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21227.t1 | XP_024627789.1 | 98.2 | 280 | 5 | 0 | 1 | 280 | 1 | 280 | 4.30E-138 | 500.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21227.t1 | A7IPQ1 | 43.0 | 149 | 80 | 4 | 65 | 211 | 3 | 148 | 1.4e-20 | 101.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21227.t1 | A0A072VEX9 | 98.2 | 280 | 5 | 0 | 1 | 280 | 1 | 280 | 3.1e-138 | 500.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21227.t1 | MTR_1g031890 | 98.214 | 280 | 5 | 0 | 1 | 280 | 1 | 280 | 0.0 | 553 |
| MS.gene21227.t1 | MTR_1g085490 | 97.857 | 280 | 6 | 0 | 1 | 280 | 1 | 280 | 0.0 | 551 |
| MS.gene21227.t1 | MTR_1g031890 | 98.195 | 277 | 5 | 0 | 1 | 277 | 1 | 277 | 0.0 | 548 |
| MS.gene21227.t1 | MTR_4g118060 | 97.143 | 280 | 8 | 0 | 1 | 280 | 1 | 280 | 0.0 | 546 |
| MS.gene21227.t1 | MTR_1g031890 | 97.938 | 194 | 4 | 0 | 1 | 194 | 1 | 194 | 2.58e-137 | 385 |
| MS.gene21227.t1 | MTR_1g110750 | 31.977 | 172 | 102 | 7 | 74 | 233 | 78 | 246 | 9.41e-12 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21227.t1 | AT5G64670 | 73.646 | 277 | 56 | 5 | 1 | 268 | 1 | 269 | 3.56e-138 | 391 |
| MS.gene21227.t1 | AT3G25920 | 30.667 | 225 | 128 | 11 | 5 | 211 | 19 | 233 | 7.69e-13 | 67.4 |
Find 0 sgRNAs with CRISPR-Local
Find 194 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATAATATTCAAAACTAT+AGG | + | 10910:4888-4907 | None:intergenic | 10.0% |
| !! | AACAAAAAAGATATATAAAC+AGG | + | 10910:4736-4755 | None:intergenic | 15.0% |
| !! | GAGATAAATAAATGTAAAAT+TGG | - | 10910:6441-6460 | MS.gene21227:CDS | 15.0% |
| !!! | AAGATAAGATTTTTATTTCA+AGG | - | 10910:5155-5174 | MS.gene21227:intron | 15.0% |
| !!! | ATTATAATTCTGAGATTTAT+GGG | - | 10910:4900-4919 | MS.gene21227:intron | 15.0% |
| !!! | TAAGTATTTCTAAAGATTTA+AGG | + | 10910:6056-6075 | None:intergenic | 15.0% |
| !!! | TATTATAATTCTGAGATTTA+TGG | - | 10910:4899-4918 | MS.gene21227:intron | 15.0% |
| !! | AAATCTTCTGTAAACATATA+TGG | - | 10910:5184-5203 | MS.gene21227:CDS | 20.0% |
| !! | ATAATAAACAAAAGAATGAG+AGG | + | 10910:5861-5880 | None:intergenic | 20.0% |
| !! | TAATAAACAAAAGAATGAGA+GGG | + | 10910:5860-5879 | None:intergenic | 20.0% |
| !! | TGAACTCTAATAATATACTA+AGG | + | 10910:4845-4864 | None:intergenic | 20.0% |
| !! | TTATTATTATTACCATACAC+AGG | - | 10910:5874-5893 | MS.gene21227:intron | 20.0% |
| !!! | AAACAAATTCATTTTAAGTG+AGG | + | 10910:5825-5844 | None:intergenic | 20.0% |
| !!! | ATCCTTTTTAATAATATTCC+TGG | + | 10910:5051-5070 | None:intergenic | 20.0% |
| !!! | TTTATTGTATTGACATTTGA+CGG | - | 10910:5332-5351 | MS.gene21227:intron | 20.0% |
| !!! | TTTTCAATTCTAAACACTTA+AGG | - | 10910:6469-6488 | MS.gene21227:CDS | 20.0% |
| ! | AAACTTTATAGGCATATAAG+AGG | - | 10910:6512-6531 | MS.gene21227:CDS | 25.0% |
| ! | AACTTTATAGGCATATAAGA+GGG | - | 10910:6513-6532 | MS.gene21227:CDS | 25.0% |
| ! | AAGGATAAAGAACAAAATGT+TGG | - | 10910:6244-6263 | MS.gene21227:intron | 25.0% |
| ! | AAGGTGTATTACAATAAGTT+AGG | - | 10910:6621-6640 | MS.gene21227:CDS | 25.0% |
| ! | AATGTCTAGATAAGTTTATG+TGG | - | 10910:5552-5571 | MS.gene21227:intron | 25.0% |
| ! | AATTGACATGTAGAAATAAG+AGG | + | 10910:5246-5265 | None:intergenic | 25.0% |
| ! | ACTGATAGATTGAGAAATAA+AGG | + | 10910:5651-5670 | None:intergenic | 25.0% |
| ! | ATTACAATAAGTTAGGCTTT+CGG | - | 10910:6628-6647 | MS.gene21227:CDS | 25.0% |
| ! | CTAAAGATTTAAGGATCAAA+AGG | + | 10910:6047-6066 | None:intergenic | 25.0% |
| ! | CTCCAGGAATATTATTAAAA+AGG | - | 10910:5046-5065 | MS.gene21227:intron | 25.0% |
| ! | CTGATAGATTGAGAAATAAA+GGG | + | 10910:5650-5669 | None:intergenic | 25.0% |
| ! | GAGTTCATTAGTTATAATTG+TGG | - | 10910:4858-4877 | MS.gene21227:intron | 25.0% |
| ! | TAAAATTTCTGTAGTGTCTA+AGG | - | 10910:6225-6244 | MS.gene21227:intron | 25.0% |
| ! | TAATAATATTCCTGGAGAAA+TGG | + | 10910:5043-5062 | None:intergenic | 25.0% |
| ! | TATACAGTCACAAACTTTAT+AGG | - | 10910:6501-6520 | MS.gene21227:CDS | 25.0% |
| ! | TGATAGATTGAGAAATAAAG+GGG | + | 10910:5649-5668 | None:intergenic | 25.0% |
| ! | TTGTAACATATTGAGTTTAC+AGG | - | 10910:6539-6558 | MS.gene21227:CDS | 25.0% |
| !!! | CTAAGTAATAAGTGTTTTTG+AGG | - | 10910:6009-6028 | MS.gene21227:intron | 25.0% |
| !!! | GTATGTATACTTTGATTTGA+AGG | - | 10910:5986-6005 | MS.gene21227:intron | 25.0% |
| !!! | TCAACTTTATCCTTTTGTTT+TGG | + | 10910:6720-6739 | None:intergenic | 25.0% |
| !!! | TTTTTAGTGCATATCATACT+TGG | + | 10910:5270-5289 | None:intergenic | 25.0% |
| AAAGATGGAGTAAGATTGAT+GGG | - | 10910:5923-5942 | MS.gene21227:intron | 30.0% | |
| ACTTTATAGGCATATAAGAG+GGG | - | 10910:6514-6533 | MS.gene21227:CDS | 30.0% | |
| ATACATACCTCTAGATGAAT+TGG | + | 10910:5974-5993 | None:intergenic | 30.0% | |
| ATGTTGCCAAAGTTAAAACA+TGG | + | 10910:6195-6214 | None:intergenic | 30.0% | |
| ATTATCTCTCAGATCATTCA+AGG | + | 10910:4513-4532 | None:intergenic | 30.0% | |
| ATTCTAAACACTTAAGGTGT+AGG | - | 10910:6475-6494 | MS.gene21227:CDS | 30.0% | |
| ATTCTTCTGTGTATTTAACC+GGG | - | 10910:4767-4786 | MS.gene21227:intron | 30.0% | |
| ATTGAGTTTACAGGTAACAA+GGG | - | 10910:6548-6567 | MS.gene21227:CDS | 30.0% | |
| ATTGCAACATTTATCAATGC+TGG | - | 10910:5740-5759 | MS.gene21227:intron | 30.0% | |
| ATTGTAATACACCTTTCTGA+CGG | + | 10910:6616-6635 | None:intergenic | 30.0% | |
| CACACACAGTTAAAATACAT+TGG | + | 10910:5365-5384 | None:intergenic | 30.0% | |
| CCATGCTTAATGCAAATATT+AGG | - | 10910:5103-5122 | MS.gene21227:intron | 30.0% | |
| CCTAATATTTGCATTAAGCA+TGG | + | 10910:5106-5125 | None:intergenic | 30.0% | |
| CCTTCAACTAAAAATGGAAT+TGG | + | 10910:6774-6793 | None:intergenic | 30.0% | |
| GATTCTTCTGTGTATTTAAC+CGG | - | 10910:4766-4785 | MS.gene21227:intron | 30.0% | |
| TAAAGATGGAGTAAGATTGA+TGG | - | 10910:5922-5941 | MS.gene21227:intron | 30.0% | |
| TATTGAGTTTACAGGTAACA+AGG | - | 10910:6547-6566 | MS.gene21227:CDS | 30.0% | |
| TCAAGCAGAATAGTCTTTAT+TGG | + | 10910:4999-5018 | None:intergenic | 30.0% | |
| TTACAATAAGTTAGGCTTTC+GGG | - | 10910:6629-6648 | MS.gene21227:CDS | 30.0% | |
| ! | AAAAATGGAATTGGCTTCTT+CGG | + | 10910:6765-6784 | None:intergenic | 30.0% |
| ! | AATGGTTTTCTTTCTTGGAA+TGG | + | 10910:5025-5044 | None:intergenic | 30.0% |
| ! | AATTCTGAAAAAGTCTCAGA+TGG | + | 10910:4955-4974 | None:intergenic | 30.0% |
| ! | TTTAACTTTGGCAACATGAA+TGG | - | 10910:6198-6217 | MS.gene21227:intron | 30.0% |
| ! | TTTCTTCTTTTACAGCCAAT+AGG | - | 10910:5707-5726 | MS.gene21227:intron | 30.0% |
| !! | AAGAACAAAATGTTGGCTTT+AGG | - | 10910:6251-6270 | MS.gene21227:intron | 30.0% |
| !! | AAGGATAAAGTTGATAGCAT+TGG | - | 10910:6726-6745 | MS.gene21227:CDS | 30.0% |
| !! | ATAAAGTTGATAGCATTGGA+CGG | - | 10910:6730-6749 | MS.gene21227:CDS | 30.0% |
| !! | ATAATTCTGAGATTTATGGG+TGG | - | 10910:4903-4922 | MS.gene21227:intron | 30.0% |
| !! | ATTCATTTTAAGTGAGGAAG+CGG | + | 10910:5819-5838 | None:intergenic | 30.0% |
| !! | CTCTAAAACCTTGAAAATCT+GGG | + | 10910:4475-4494 | None:intergenic | 30.0% |
| !!! | ACTTTATCCTTTTGTTTTGG+AGG | + | 10910:6717-6736 | None:intergenic | 30.0% |
| !!! | CCAATTCCATTTTTAGTTGA+AGG | - | 10910:6771-6790 | MS.gene21227:CDS | 30.0% |
| !!! | TTTTGAGCTTATTTTGATGC+TGG | - | 10910:6108-6127 | MS.gene21227:intron | 30.0% |
| AAGATGGAGTAAGATTGATG+GGG | - | 10910:5924-5943 | MS.gene21227:intron | 35.0% | |
| AAGGGATGAAATTGGATAGA+CGG | + | 10910:4401-4420 | None:intergenic | 35.0% | |
| AGAAAGAAAACCATTTCTCC+AGG | - | 10910:5030-5049 | MS.gene21227:intron | 35.0% | |
| AGATTGAGAAATAAAGGGGA+AGG | + | 10910:5645-5664 | None:intergenic | 35.0% | |
| AGCAAACATTAGATAGCCAA+TGG | + | 10910:4800-4819 | None:intergenic | 35.0% | |
| ATGGTTTACACTTGCCAAAA+GGG | + | 10910:6157-6176 | None:intergenic | 35.0% | |
| CAAGTGTAAACCATCAAAAG+TGG | - | 10910:6163-6182 | MS.gene21227:intron | 35.0% | |
| CTTGACACTCATAAATCTGA+AGG | + | 10910:5455-5474 | None:intergenic | 35.0% | |
| CTTGGGAAGCAAATTAAAGA+TGG | - | 10910:5908-5927 | MS.gene21227:intron | 35.0% | |
| GAGTGTCAAGTAACTTCTAA+GGG | - | 10910:5465-5484 | MS.gene21227:intron | 35.0% | |
| GATCACAATGAAAACACTCA+AGG | - | 10910:5784-5803 | MS.gene21227:intron | 35.0% | |
| TGAGTGTCAAGTAACTTCTA+AGG | - | 10910:5464-5483 | MS.gene21227:intron | 35.0% | |
| TGGCTTCCTTCAACTAAAAA+TGG | + | 10910:6780-6799 | None:intergenic | 35.0% | |
| TGGTTACTTGTGAGCAATAA+TGG | - | 10910:4923-4942 | MS.gene21227:intron | 35.0% | |
| TGTAAACATATATGGCTGAG+TGG | - | 10910:5192-5211 | MS.gene21227:CDS | 35.0% | |
| ! | AGAAGTATACCTGAAAAGTG+AGG | + | 10910:4712-4731 | None:intergenic | 35.0% |
| ! | CTTTCCTTGTCTTCTGTTTT+CGG | + | 10910:4541-4560 | None:intergenic | 35.0% |
| ! | CTTTTACAGCCAATAGGTTT+GGG | - | 10910:5713-5732 | MS.gene21227:intron | 35.0% |
| ! | GCAATTTTTCCCAAACCTAT+TGG | + | 10910:5725-5744 | None:intergenic | 35.0% |
| ! | GGAGAAATGGTTTTCTTTCT+TGG | + | 10910:5030-5049 | None:intergenic | 35.0% |
| ! | TATCTAATGTTTGCTGCATC+AGG | - | 10910:4805-4824 | MS.gene21227:intron | 35.0% |
| ! | TCTTTTACAGCCAATAGGTT+TGG | - | 10910:5712-5731 | MS.gene21227:intron | 35.0% |
| ! | TTTCCTTGTCTTCTGTTTTC+GGG | + | 10910:4540-4559 | None:intergenic | 35.0% |
| !! | ATAAGTGTTTTTGAGGACCA+CGG | - | 10910:6016-6035 | MS.gene21227:intron | 35.0% |
| !! | GCTCTAAAACCTTGAAAATC+TGG | + | 10910:4476-4495 | None:intergenic | 35.0% |
| !! | TCGATTTTGCTATGAAGAGT+TGG | - | 10910:6284-6303 | MS.gene21227:intron | 35.0% |
| !!! | ATTTTTAGTTGAAGGAAGCC+AGG | - | 10910:6779-6798 | MS.gene21227:CDS | 35.0% |
| !!! | TGACAGCCATGTTTTAACTT+TGG | - | 10910:6186-6205 | MS.gene21227:intron | 35.0% |
| !!! | TTATCCTTTTGTTTTGGAGG+AGG | + | 10910:6714-6733 | None:intergenic | 35.0% |
| !!! | TTTTAGAGCTTACAGTCTTC+TGG | - | 10910:4487-4506 | MS.gene21227:CDS | 35.0% |
| AAAGATACGAGCTTGAACCA+CGG | + | 10910:5602-5621 | None:intergenic | 40.0% | |
| ACCTGAAAAGTGAGGCTAAA+TGG | + | 10910:4704-4723 | None:intergenic | 40.0% | |
| ACTCACAACAAATCCGTTCT+CGG | - | 10910:4371-4390 | MS.gene21227:CDS | 40.0% | |
| AGGGATGAAATTGGATAGAC+GGG | + | 10910:4400-4419 | None:intergenic | 40.0% | |
| ATTACCATACACAGGATGCA+GGG | - | 10910:5882-5901 | MS.gene21227:intron | 40.0% | |
| CCTGAAAAGTGAGGCTAAAT+GGG | + | 10910:4703-4722 | None:intergenic | 40.0% | |
| CGAAAACAGAAGACAAGGAA+AGG | - | 10910:4539-4558 | MS.gene21227:CDS | 40.0% | |
| GATGGTTTACACTTGCCAAA+AGG | + | 10910:6158-6177 | None:intergenic | 40.0% | |
| GCCAAAGTGAACTACACATT+TGG | + | 10910:5421-5440 | None:intergenic | 40.0% | |
| GCCAAATGTGTAGTTCACTT+TGG | - | 10910:5417-5436 | MS.gene21227:intron | 40.0% | |
| TAGACCTCCTCCAAAACAAA+AGG | - | 10910:6707-6726 | MS.gene21227:CDS | 40.0% | |
| TATTACCATACACAGGATGC+AGG | - | 10910:5881-5900 | MS.gene21227:intron | 40.0% | |
| TGAAAATCTGGGTGAGCATT+GGG | + | 10910:4464-4483 | None:intergenic | 40.0% | |
| TTCAGCTTCACAATGATGCT+CGG | + | 10910:5080-5099 | None:intergenic | 40.0% | |
| TTGAAAATCTGGGTGAGCAT+TGG | + | 10910:4465-4484 | None:intergenic | 40.0% | |
| ! | AATGCTCACCCAGATTTTCA+AGG | - | 10910:4464-4483 | MS.gene21227:CDS | 40.0% |
| ! | TTCCTTGTCTTCTGTTTTCG+GGG | + | 10910:4539-4558 | None:intergenic | 40.0% |
| !! | GTGAGCATTGGGATTAAATG+TGG | + | 10910:4453-4472 | None:intergenic | 40.0% |
| AAAGGGGAAGGATACCAAAC+AGG | + | 10910:5633-5652 | None:intergenic | 45.0% | |
| AACCACGTTTAGGCATCCTA+CGG | + | 10910:4673-4692 | None:intergenic | 45.0% | |
| AAGGGGAAGGATACCAAACA+GGG | + | 10910:5632-5651 | None:intergenic | 45.0% | |
| ACAAGGAAAGGTCGTGGTAT+TGG | - | 10910:4551-4570 | MS.gene21227:CDS | 45.0% | |
| AGCCAGGAAAGGTTCAAAGT+TGG | - | 10910:4619-4638 | MS.gene21227:intron | 45.0% | |
| ATAGCCAATGGTCAAGTTCC+CGG | + | 10910:4788-4807 | None:intergenic | 45.0% | |
| ATCTTTGGACCTTCCCTGTT+TGG | - | 10910:5616-5635 | MS.gene21227:intron | 45.0% | |
| CACGAACGTTGAAAGAGTGA+GGG | + | 10910:4430-4449 | None:intergenic | 45.0% | |
| CCAATGGCCAATTCATCTAG+AGG | - | 10910:5964-5983 | MS.gene21227:intron | 45.0% | |
| CCAGGAAAGGTTCAAAGTTG+GGG | - | 10910:4621-4640 | MS.gene21227:intron | 45.0% | |
| CCTCTAGATGAATTGGCCAT+TGG | + | 10910:5967-5986 | None:intergenic | 45.0% | |
| CCTGAGTGGTTTGAGAAGAA+AGG | - | 10910:6663-6682 | MS.gene21227:CDS | 45.0% | |
| CCTTTCTTCTCAAACCACTC+AGG | + | 10910:6666-6685 | None:intergenic | 45.0% | |
| GCCAGGAAAGGTTCAAAGTT+GGG | - | 10910:4620-4639 | MS.gene21227:intron | 45.0% | |
| GGGTTCTTGAAACCACGTTT+AGG | + | 10910:4683-4702 | None:intergenic | 45.0% | |
| GTGGTTCAAGCTCGTATCTT+TGG | - | 10910:5601-5620 | MS.gene21227:intron | 45.0% | |
| TAGTCATAAATCCCTAGCCG+TGG | - | 10910:5582-5601 | MS.gene21227:intron | 45.0% | |
| TCAGCTTCACAATGATGCTC+GGG | + | 10910:5079-5098 | None:intergenic | 45.0% | |
| TTAACCGGGAACTTGACCAT+TGG | - | 10910:4781-4800 | MS.gene21227:intron | 45.0% | |
| TTACCATACACAGGATGCAG+GGG | - | 10910:5883-5902 | MS.gene21227:intron | 45.0% | |
| TTCCCCGAAAACAGAAGACA+AGG | - | 10910:4534-4553 | MS.gene21227:CDS | 45.0% | |
| ! | AAAGGTCGTGGTATTGGATC+TGG | - | 10910:4557-4576 | MS.gene21227:CDS | 45.0% |
| ! | CAAAAGGGAAAAGAGAGTGC+AGG | + | 10910:6142-6161 | None:intergenic | 45.0% |
| ! | CGTGGTATTGGATCTGGAAA+GGG | - | 10910:4563-4582 | MS.gene21227:CDS | 45.0% |
| ! | CTGCACTCTCTTTTCCCTTT+TGG | - | 10910:6140-6159 | MS.gene21227:intron | 45.0% |
| ! | TCGTGGTATTGGATCTGGAA+AGG | - | 10910:4562-4581 | MS.gene21227:CDS | 45.0% |
| !! | ATGGCTGTCACCACTTTTGA+TGG | + | 10910:6176-6195 | None:intergenic | 45.0% |
| !! | CCCATTTAGCCTCACTTTTC+AGG | - | 10910:4700-4719 | MS.gene21227:intron | 45.0% |
| !! | GTGGTTCTGAGAAGATCCAA+TGG | - | 10910:5948-5967 | MS.gene21227:intron | 45.0% |
| AAAGAGTGAGGGAGCTGCAA+GGG | + | 10910:4419-4438 | None:intergenic | 50.0% | |
| AAAGGGAAAGACTGCTGGGA+GGG | - | 10910:4580-4599 | MS.gene21227:intron | 50.0% | |
| AGGTAACAAGGGTCACTGTC+AGG | - | 10910:6559-6578 | MS.gene21227:CDS | 50.0% | |
| CAGAAGACAAGGAAAGGTCG+TGG | - | 10910:4545-4564 | MS.gene21227:CDS | 50.0% | |
| CCCCAACTTTGAACCTTTCC+TGG | + | 10910:4624-4643 | None:intergenic | 50.0% | |
| CTGGAAAGGGAAAGACTGCT+GGG | - | 10910:4576-4595 | MS.gene21227:intron | 50.0% | |
| GATAGACGGGTATCCGAGAA+CGG | + | 10910:4387-4406 | None:intergenic | 50.0% | |
| GCACGAACGTTGAAAGAGTG+AGG | + | 10910:4431-4450 | None:intergenic | 50.0% | |
| GGAAGGATACCAAACAGGGA+AGG | + | 10910:5628-5647 | None:intergenic | 50.0% | |
| GGAGCTGCAAGGGATGAAAT+TGG | + | 10910:4409-4428 | None:intergenic | 50.0% | |
| GGTAACAAGGGTCACTGTCA+GGG | - | 10910:6560-6579 | MS.gene21227:CDS | 50.0% | |
| GGTTCAAAGTTGGGGTTCGA+AGG | - | 10910:4629-4648 | MS.gene21227:intron | 50.0% | |
| TCAAAGTTGGGGTTCGAAGG+AGG | - | 10910:4632-4651 | MS.gene21227:intron | 50.0% | |
| TCTGGAAAGGGAAAGACTGC+TGG | - | 10910:4575-4594 | MS.gene21227:intron | 50.0% | |
| ! | TTGAACCTTTCCTGGCTCTC+TGG | + | 10910:4616-4635 | None:intergenic | 50.0% |
| !! | AGGATCAAAAGGCATCACCG+TGG | + | 10910:6036-6055 | None:intergenic | 50.0% |
| AAAGGCCAGAGAGCCAGGAA+AGG | - | 10910:4608-4627 | MS.gene21227:intron | 55.0% | |
| AAGCAGTTGAAGCGGCTGGT+GGG | - | 10910:6589-6608 | MS.gene21227:CDS | 55.0% | |
| AAGGAAGCAGTTGAAGCGGC+TGG | - | 10910:6585-6604 | MS.gene21227:CDS | 55.0% | |
| AAGGGAAAGACTGCTGGGAG+GGG | - | 10910:4581-4600 | MS.gene21227:intron | 55.0% | |
| ACGAGCTTGAACCACGGCTA+GGG | + | 10910:5596-5615 | None:intergenic | 55.0% | |
| AGCCGCTTCAACTGCTTCCT+TGG | + | 10910:6586-6605 | None:intergenic | 55.0% | |
| GAAAGAGTGAGGGAGCTGCA+AGG | + | 10910:4420-4439 | None:intergenic | 55.0% | |
| GAAAGGGAAAGACTGCTGGG+AGG | - | 10910:4579-4598 | MS.gene21227:intron | 55.0% | |
| GCTGACCTACTGGAAGATCC+TGG | + | 10910:6800-6819 | None:intergenic | 55.0% | |
| GCTGAGTGGCTTGACTGTGT+TGG | - | 10910:5206-5225 | MS.gene21227:CDS | 55.0% | |
| GGAAGCCAGGATCTTCCAGT+AGG | - | 10910:6792-6811 | MS.gene21227:CDS | 55.0% | |
| GGAGTAAGATTGATGGGGCG+TGG | - | 10910:5929-5948 | MS.gene21227:intron | 55.0% | |
| GGCCAAGGAAGCAGTTGAAG+CGG | - | 10910:6581-6600 | MS.gene21227:CDS | 55.0% | |
| GTACCCCTGCATCCTGTGTA+TGG | + | 10910:5889-5908 | None:intergenic | 55.0% | |
| TACGAGCTTGAACCACGGCT+AGG | + | 10910:5597-5616 | None:intergenic | 55.0% | |
| TAGGCATCCTACGGCGAAGA+GGG | + | 10910:4664-4683 | None:intergenic | 55.0% | |
| TTAGGCATCCTACGGCGAAG+AGG | + | 10910:4665-4684 | None:intergenic | 55.0% | |
| ! | GGAATTGGCTTCTTCGGAGC+AGG | + | 10910:6759-6778 | None:intergenic | 55.0% |
| ! | GGAGGAGGTCTAGCTGCTTT+AGG | + | 10910:6699-6718 | None:intergenic | 55.0% |
| !! | ACACAGGATGCAGGGGTACT+TGG | - | 10910:5890-5909 | MS.gene21227:intron | 55.0% |
| !! | CACAGGATGCAGGGGTACTT+GGG | - | 10910:5891-5910 | MS.gene21227:intron | 55.0% |
| AAGGGTCACTGTCAGGGCCA+AGG | - | 10910:6566-6585 | MS.gene21227:CDS | 60.0% | |
| ACTGCTGGGAGGGGTCACAA+AGG | - | 10910:4590-4609 | MS.gene21227:intron | 60.0% | |
| AGGCATCCTACGGCGAAGAG+GGG | + | 10910:4663-4682 | None:intergenic | 60.0% | |
| CGCCGTAGGATGCCTAAACG+TGG | - | 10910:4668-4687 | MS.gene21227:intron | 60.0% | |
| GAAGCAGTTGAAGCGGCTGG+TGG | - | 10910:6588-6607 | MS.gene21227:CDS | 60.0% | |
| GTCACAAAGGCCAGAGAGCC+AGG | - | 10910:4603-4622 | MS.gene21227:intron | 60.0% | |
| TCCTACGGCGAAGAGGGGTT+TGG | + | 10910:4658-4677 | None:intergenic | 60.0% | |
| ! | GGGCACTGTTGAAGCCTGAG+TGG | - | 10910:6649-6668 | MS.gene21227:CDS | 60.0% |
| GCCAAACCCCTCTTCGCCGT+AGG | - | 10910:4654-4673 | MS.gene21227:intron | 65.0% | |
| ! | GGCTGGTGGGTCCGTCAGAA+AGG | - | 10910:6602-6621 | MS.gene21227:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 10910 | gene | 4320 | 6827 | 4320 | ID=MS.gene21227 |
| 10910 | mRNA | 4320 | 6827 | 4320 | ID=MS.gene21227.t1;Parent=MS.gene21227 |
| 10910 | exon | 6426 | 6827 | 6426 | ID=MS.gene21227.t1.exon1;Parent=MS.gene21227.t1 |
| 10910 | CDS | 6426 | 6827 | 6426 | ID=cds.MS.gene21227.t1;Parent=MS.gene21227.t1 |
| 10910 | exon | 5342 | 5425 | 5342 | ID=MS.gene21227.t1.exon2;Parent=MS.gene21227.t1 |
| 10910 | CDS | 5342 | 5425 | 5342 | ID=cds.MS.gene21227.t1;Parent=MS.gene21227.t1 |
| 10910 | exon | 5162 | 5251 | 5162 | ID=MS.gene21227.t1.exon3;Parent=MS.gene21227.t1 |
| 10910 | CDS | 5162 | 5251 | 5162 | ID=cds.MS.gene21227.t1;Parent=MS.gene21227.t1 |
| 10910 | exon | 4320 | 4586 | 4320 | ID=MS.gene21227.t1.exon4;Parent=MS.gene21227.t1 |
| 10910 | CDS | 4320 | 4586 | 4320 | ID=cds.MS.gene21227.t1;Parent=MS.gene21227.t1 |
| Gene Sequence |
| Protein sequence |
