Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene021632.t1 | RHN76880.1 | 96.2 | 418 | 15 | 1 | 1 | 418 | 1 | 417 | 5.60E-219 | 770 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene021632.t1 | Q147G5 | 51.3 | 427 | 173 | 7 | 9 | 418 | 26 | 434 | 4.8e-102 | 372.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene021632.t1 | G7I6A9 | 96.2 | 418 | 15 | 1 | 1 | 418 | 6 | 422 | 4.1e-219 | 770.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene021632.t1 | MTR_1g011470 | 96.172 | 418 | 15 | 1 | 1 | 418 | 6 | 422 | 0.0 | 827 |
MS.gene021632.t1 | MTR_3g107970 | 58.261 | 460 | 140 | 6 | 9 | 418 | 17 | 474 | 0.0 | 522 |
MS.gene021632.t1 | MTR_2g102550 | 46.296 | 432 | 204 | 6 | 3 | 418 | 10 | 429 | 4.24e-117 | 348 |
MS.gene021632.t1 | MTR_2g102520 | 59.727 | 293 | 115 | 3 | 129 | 418 | 187 | 479 | 2.95e-115 | 345 |
MS.gene021632.t1 | MTR_3g088415 | 51.661 | 271 | 131 | 0 | 138 | 408 | 221 | 491 | 1.45e-97 | 301 |
MS.gene021632.t1 | MTR_3g088405 | 49.818 | 275 | 136 | 1 | 141 | 413 | 227 | 501 | 2.67e-94 | 293 |
MS.gene021632.t1 | MTR_1g018680 | 48.592 | 284 | 143 | 2 | 134 | 415 | 68 | 350 | 4.73e-89 | 274 |
MS.gene021632.t1 | MTR_3g102510 | 48.638 | 257 | 132 | 0 | 157 | 413 | 74 | 330 | 1.70e-84 | 262 |
MS.gene021632.t1 | MTR_3g102530 | 47.426 | 272 | 141 | 1 | 144 | 413 | 71 | 342 | 3.42e-82 | 256 |
MS.gene021632.t1 | MTR_3g088415 | 53.182 | 220 | 103 | 0 | 138 | 357 | 221 | 440 | 5.12e-81 | 256 |
MS.gene021632.t1 | MTR_3g102520 | 45.588 | 272 | 146 | 1 | 144 | 413 | 78 | 349 | 9.83e-80 | 251 |
MS.gene021632.t1 | MTR_3g102560 | 48.485 | 264 | 129 | 4 | 150 | 413 | 61 | 317 | 8.03e-73 | 231 |
MS.gene021632.t1 | MTR_3g102540 | 47.451 | 255 | 126 | 4 | 161 | 413 | 13 | 261 | 1.82e-68 | 218 |
MS.gene021632.t1 | MTR_3g088415 | 54.651 | 172 | 78 | 0 | 138 | 309 | 221 | 392 | 1.33e-63 | 209 |
MS.gene021632.t1 | MTR_5g023790 | 40.441 | 272 | 154 | 4 | 141 | 411 | 155 | 419 | 2.08e-60 | 202 |
MS.gene021632.t1 | MTR_7g089080 | 42.125 | 273 | 153 | 5 | 141 | 411 | 182 | 451 | 6.33e-59 | 208 |
MS.gene021632.t1 | MTR_5g088980 | 41.328 | 271 | 150 | 6 | 143 | 411 | 150 | 413 | 5.05e-58 | 196 |
MS.gene021632.t1 | MTR_8g074000 | 39.350 | 277 | 156 | 6 | 138 | 411 | 156 | 423 | 5.93e-58 | 196 |
MS.gene021632.t1 | MTR_5g023790 | 43.777 | 233 | 123 | 4 | 141 | 372 | 155 | 380 | 8.83e-57 | 191 |
MS.gene021632.t1 | MTR_5g023790 | 44.379 | 169 | 92 | 2 | 141 | 308 | 155 | 322 | 3.73e-41 | 149 |
MS.gene021632.t1 | MTR_3g060770 | 32.184 | 261 | 162 | 9 | 126 | 381 | 2 | 252 | 1.64e-28 | 114 |
MS.gene021632.t1 | MTR_3g061680 | 33.054 | 239 | 146 | 6 | 139 | 372 | 4 | 233 | 9.66e-28 | 111 |
MS.gene021632.t1 | MTR_3g060820 | 32.636 | 239 | 147 | 6 | 139 | 372 | 4 | 233 | 1.53e-26 | 108 |
MS.gene021632.t1 | MTR_3g060410 | 36.702 | 188 | 110 | 5 | 190 | 372 | 135 | 318 | 8.90e-26 | 107 |
MS.gene021632.t1 | MTR_3g060400 | 32.143 | 224 | 138 | 6 | 154 | 372 | 25 | 239 | 5.04e-25 | 103 |
MS.gene021632.t1 | MTR_3g460990 | 32.143 | 224 | 138 | 6 | 154 | 372 | 25 | 239 | 5.04e-25 | 103 |
MS.gene021632.t1 | MTR_1g032850 | 36.667 | 180 | 98 | 5 | 177 | 352 | 364 | 531 | 1.06e-19 | 91.7 |
MS.gene021632.t1 | MTR_5g044040 | 46.753 | 77 | 41 | 0 | 212 | 288 | 7 | 83 | 6.35e-19 | 82.8 |
MS.gene021632.t1 | MTR_6g045270 | 27.839 | 273 | 171 | 9 | 149 | 414 | 38 | 291 | 9.18e-16 | 78.2 |
MS.gene021632.t1 | MTR_5g011900 | 29.932 | 147 | 102 | 1 | 183 | 329 | 95 | 240 | 2.31e-15 | 75.9 |
MS.gene021632.t1 | MTR_3g100710 | 27.933 | 179 | 124 | 3 | 168 | 341 | 73 | 251 | 1.59e-14 | 75.1 |
MS.gene021632.t1 | MTR_4g080990 | 26.257 | 179 | 127 | 3 | 168 | 341 | 68 | 246 | 3.76e-13 | 70.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene021632.t1 | AT5G11300 | 51.408 | 426 | 174 | 6 | 9 | 418 | 26 | 434 | 6.09e-137 | 399 |
MS.gene021632.t1 | AT5G25380 | 49.764 | 424 | 193 | 8 | 8 | 418 | 25 | 441 | 6.63e-126 | 371 |
MS.gene021632.t1 | AT5G25380 | 49.762 | 420 | 193 | 6 | 8 | 418 | 25 | 435 | 2.24e-125 | 370 |
MS.gene021632.t1 | AT5G25380 | 49.762 | 420 | 193 | 6 | 8 | 418 | 25 | 435 | 2.24e-125 | 370 |
MS.gene021632.t1 | AT1G80370 | 47.891 | 403 | 208 | 1 | 10 | 410 | 48 | 450 | 9.37e-123 | 364 |
MS.gene021632.t1 | AT5G25380 | 49.628 | 403 | 186 | 5 | 8 | 402 | 25 | 418 | 8.97e-121 | 357 |
MS.gene021632.t1 | AT1G15570 | 44.469 | 461 | 202 | 9 | 1 | 418 | 1 | 450 | 7.50e-117 | 348 |
MS.gene021632.t1 | AT5G11300 | 48.901 | 364 | 154 | 5 | 9 | 357 | 26 | 372 | 1.03e-106 | 321 |
MS.gene021632.t1 | AT1G44110 | 51.685 | 267 | 129 | 0 | 141 | 407 | 178 | 444 | 1.34e-97 | 300 |
MS.gene021632.t1 | AT5G43080 | 51.292 | 271 | 132 | 0 | 143 | 413 | 73 | 343 | 4.70e-97 | 295 |
MS.gene021632.t1 | AT1G47210 | 51.648 | 273 | 130 | 1 | 143 | 413 | 88 | 360 | 5.83e-95 | 290 |
MS.gene021632.t1 | AT5G43080 | 51.292 | 271 | 127 | 1 | 143 | 413 | 73 | 338 | 7.65e-95 | 289 |
MS.gene021632.t1 | AT1G77390 | 45.846 | 325 | 170 | 2 | 87 | 407 | 106 | 428 | 2.56e-93 | 288 |
MS.gene021632.t1 | AT1G47230 | 49.638 | 276 | 133 | 2 | 142 | 413 | 80 | 353 | 1.23e-90 | 278 |
MS.gene021632.t1 | AT1G47230 | 49.458 | 277 | 133 | 3 | 142 | 413 | 80 | 354 | 7.88e-89 | 274 |
MS.gene021632.t1 | AT1G47220 | 50.554 | 271 | 128 | 2 | 143 | 409 | 42 | 310 | 2.51e-85 | 263 |
MS.gene021632.t1 | AT1G76310 | 40.925 | 281 | 157 | 5 | 133 | 411 | 152 | 425 | 2.78e-62 | 207 |
MS.gene021632.t1 | AT1G20610 | 39.706 | 272 | 156 | 4 | 141 | 411 | 160 | 424 | 7.52e-60 | 201 |
MS.gene021632.t1 | AT1G76310 | 43.802 | 242 | 127 | 5 | 133 | 372 | 152 | 386 | 1.69e-57 | 193 |
MS.gene021632.t1 | AT1G76310 | 37.217 | 309 | 157 | 6 | 133 | 411 | 152 | 453 | 2.80e-56 | 192 |
MS.gene021632.t1 | AT5G06150 | 42.279 | 272 | 148 | 5 | 141 | 411 | 165 | 428 | 2.87e-56 | 192 |
MS.gene021632.t1 | AT2G26760 | 37.764 | 331 | 186 | 11 | 76 | 398 | 47 | 365 | 7.23e-54 | 184 |
MS.gene021632.t1 | AT3G11520 | 42.353 | 255 | 139 | 4 | 157 | 411 | 159 | 405 | 8.53e-53 | 182 |
MS.gene021632.t1 | AT4G37490 | 39.209 | 278 | 154 | 7 | 141 | 411 | 148 | 417 | 1.55e-51 | 179 |
MS.gene021632.t1 | AT2G17620 | 36.056 | 355 | 193 | 9 | 55 | 407 | 92 | 414 | 1.90e-51 | 179 |
MS.gene021632.t1 | AT3G11520 | 45.291 | 223 | 114 | 4 | 157 | 379 | 159 | 373 | 1.26e-50 | 175 |
MS.gene021632.t1 | AT4G35620 | 40.221 | 271 | 148 | 7 | 141 | 407 | 155 | 415 | 1.38e-49 | 174 |
MS.gene021632.t1 | AT1G16330 | 37.647 | 255 | 152 | 3 | 157 | 411 | 395 | 642 | 8.62e-48 | 173 |
MS.gene021632.t1 | AT4G35620 | 42.797 | 236 | 121 | 7 | 141 | 372 | 155 | 380 | 9.20e-46 | 162 |
MS.gene021632.t1 | AT1G76310 | 45.251 | 179 | 95 | 3 | 133 | 309 | 152 | 329 | 9.10e-44 | 156 |
MS.gene021632.t1 | AT5G06150 | 45.294 | 170 | 90 | 3 | 141 | 309 | 165 | 332 | 7.74e-38 | 140 |
MS.gene021632.t1 | AT1G20590 | 43.312 | 157 | 83 | 2 | 216 | 372 | 63 | 213 | 3.08e-36 | 134 |
MS.gene021632.t1 | AT1G47210 | 51.402 | 107 | 46 | 2 | 143 | 245 | 88 | 192 | 9.16e-30 | 114 |
MS.gene021632.t1 | AT1G34460 | 36.095 | 169 | 85 | 4 | 141 | 308 | 241 | 387 | 1.83e-20 | 93.6 |
MS.gene021632.t1 | AT1G34460 | 36.095 | 169 | 85 | 4 | 141 | 308 | 255 | 401 | 2.08e-20 | 93.6 |
MS.gene021632.t1 | AT1G34460 | 36.095 | 169 | 85 | 4 | 141 | 308 | 255 | 401 | 2.08e-20 | 93.6 |
MS.gene021632.t1 | AT1G34460 | 36.095 | 169 | 85 | 4 | 141 | 308 | 255 | 401 | 2.08e-20 | 93.6 |
MS.gene021632.t1 | AT1G34460 | 36.095 | 169 | 85 | 4 | 141 | 308 | 255 | 401 | 2.08e-20 | 93.6 |
MS.gene021632.t1 | AT1G34460 | 36.095 | 169 | 85 | 4 | 141 | 308 | 255 | 401 | 2.10e-20 | 93.6 |
MS.gene021632.t1 | AT1G34460 | 36.095 | 169 | 85 | 4 | 141 | 308 | 255 | 401 | 2.22e-20 | 93.6 |
MS.gene021632.t1 | AT1G34460 | 36.095 | 169 | 85 | 4 | 141 | 308 | 252 | 398 | 2.38e-20 | 93.6 |
MS.gene021632.t1 | AT1G34460 | 36.095 | 169 | 85 | 4 | 141 | 308 | 252 | 398 | 2.38e-20 | 93.6 |
MS.gene021632.t1 | AT1G14750 | 32.432 | 185 | 112 | 5 | 166 | 346 | 365 | 540 | 8.85e-17 | 82.8 |
MS.gene021632.t1 | AT1G14750 | 32.432 | 185 | 112 | 5 | 166 | 346 | 365 | 540 | 1.01e-16 | 82.8 |
MS.gene021632.t1 | AT1G14750 | 32.432 | 185 | 112 | 5 | 166 | 346 | 197 | 372 | 1.03e-16 | 82.0 |
MS.gene021632.t1 | AT1G14750 | 32.432 | 185 | 111 | 6 | 166 | 346 | 197 | 371 | 1.53e-15 | 78.6 |
MS.gene021632.t1 | AT1G70210 | 30.472 | 233 | 144 | 7 | 121 | 344 | 15 | 238 | 3.14e-15 | 77.0 |
Find 86 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATGAACAAGCTGTTGTTAT+TGG | 0.143407 | 1.4:+9165112 | MS.gene021632:CDS |
CTGCAAGGTTTCCATGTAAT+TGG | 0.188546 | 1.4:-9167454 | None:intergenic |
AGTTAAAGGATTCTCCTATT+TGG | 0.207301 | 1.4:+9167213 | MS.gene021632:CDS |
CTCTTTCTTTGCATCCTCTT+TGG | 0.213831 | 1.4:-9166513 | None:intergenic |
GGACATTGATTCGAAGTTAA+AGG | 0.247922 | 1.4:+9167199 | MS.gene021632:CDS |
TGAATACTAGTGTATATATC+AGG | 0.293341 | 1.4:-9167248 | None:intergenic |
TCCCGGCATGAGGGGAATTC+TGG | 0.318331 | 1.4:+9167488 | MS.gene021632:CDS |
TCAAGCTGACCTGGAATTCC+TGG | 0.325987 | 1.4:+9169111 | MS.gene021632:CDS |
AAAAGAGATTCCACCGGTTT+CGG | 0.329052 | 1.4:-9169646 | None:intergenic |
TTGATGTCTCCTTGCAAGTT+TGG | 0.336175 | 1.4:+9166486 | MS.gene021632:CDS |
CACAGCAGATGCAGCTATCT+TGG | 0.343056 | 1.4:-9169191 | None:intergenic |
AGCAAAATGGACAAAGAAAA+TGG | 0.345326 | 1.4:+9165034 | None:intergenic |
ATATTGATAGGTATTGAAAA+TGG | 0.354850 | 1.4:+9168659 | MS.gene021632:intron |
GGCAAATTTGTCTCCGAAAC+CGG | 0.382668 | 1.4:+9169633 | MS.gene021632:CDS |
CTGAGAAATGTCTTGATTGT+TGG | 0.391036 | 1.4:-9168723 | None:intergenic |
GTTTCCATGTAATTGGCTAA+TGG | 0.400537 | 1.4:-9167447 | None:intergenic |
AGTTATTTATACCTCTTGTC+TGG | 0.400903 | 1.4:-9168553 | None:intergenic |
TGACTGGTTGAGGGTCCATC+TGG | 0.412265 | 1.4:-9169221 | None:intergenic |
AATAGTTTGCCAGGAATTCC+AGG | 0.413734 | 1.4:-9169120 | None:intergenic |
GGGGCATAAGAAGTCCAAAT+AGG | 0.432031 | 1.4:-9167227 | None:intergenic |
AGCATTGAGACGACAGCCTT+TGG | 0.432531 | 1.4:-9169438 | None:intergenic |
ACGGATGCTCTGACTGGTTG+AGG | 0.439625 | 1.4:-9169231 | None:intergenic |
AATTCTGGTTGACTGGCTTG+TGG | 0.442775 | 1.4:+9167503 | MS.gene021632:CDS |
AAGCAACTGCAGCCTTCGTT+TGG | 0.443429 | 1.4:-9167960 | None:intergenic |
GTTGCAAATCTATCAGTTCA+AGG | 0.445104 | 1.4:-9169409 | None:intergenic |
TGAGGGGAATTCTGGTTGAC+TGG | 0.454644 | 1.4:+9167496 | MS.gene021632:CDS |
ACTAAGTGCCTCAGTTGGCT+TGG | 0.457791 | 1.4:+9167169 | MS.gene021632:CDS |
ACAGCAAGGTAAAGTGTGTC+TGG | 0.458805 | 1.4:-9167899 | None:intergenic |
TCGTTTGGTAATCAAACGTT+GGG | 0.460508 | 1.4:-9167945 | None:intergenic |
CTAAGTGCCTCAGTTGGCTT+GGG | 0.464985 | 1.4:+9167170 | MS.gene021632:CDS |
CTCAGTTGGCTTGGGAATTG+TGG | 0.470396 | 1.4:+9167178 | MS.gene021632:CDS |
CACAGAAGGTTGCACTTGCA+AGG | 0.472581 | 1.4:-9166579 | None:intergenic |
TTTGTATAGTGCTCCAGAGT+TGG | 0.476724 | 1.4:-9169356 | None:intergenic |
CGGATGCTCTGACTGGTTGA+GGG | 0.478583 | 1.4:-9169230 | None:intergenic |
TCCATTACACAGAAGAAAGA+AGG | 0.481135 | 1.4:+9166428 | MS.gene021632:intron |
TATGAAGAGATTTGTGCTCC+TGG | 0.491959 | 1.4:+9168492 | MS.gene021632:CDS |
GGTATTGAAAATGGAGAAAG+AGG | 0.497773 | 1.4:+9168668 | MS.gene021632:intron |
TCAGGTTGCTCAAGCTGACC+TGG | 0.500817 | 1.4:+9169102 | MS.gene021632:intron |
GAGTGTCCTGCATTGAGAGC+AGG | 0.501654 | 1.4:-9166610 | None:intergenic |
ACCAGAATTCCCCTCATGCC+GGG | 0.504323 | 1.4:-9167489 | None:intergenic |
AAACGAAGGCTGCAGTTGCT+TGG | 0.504335 | 1.4:+9167962 | MS.gene021632:CDS |
CTTGCAAGTGCAACCTTCTG+TGG | 0.514382 | 1.4:+9166580 | MS.gene021632:CDS |
AACCAGAATTCCCCTCATGC+CGG | 0.516850 | 1.4:-9167490 | None:intergenic |
CAACAATCAAGACATTTCTC+AGG | 0.517270 | 1.4:+9168724 | MS.gene021632:CDS |
ACTCTCAACTCTCCAAATAC+AGG | 0.521458 | 1.4:+9166629 | MS.gene021632:CDS |
AGACCCACGGATGCTCTGAC+TGG | 0.522371 | 1.4:-9169237 | None:intergenic |
TTAAATCTCTCCAGTGTGAA+AGG | 0.524126 | 1.4:+9167421 | MS.gene021632:intron |
TGGTAATCAAACGTTGGGAA+AGG | 0.528424 | 1.4:-9167940 | None:intergenic |
TTATTTGCAGAATCCAACTC+TGG | 0.529754 | 1.4:+9169343 | MS.gene021632:intron |
TTTGGTTGTCCAAACTTGCA+AGG | 0.533560 | 1.4:-9166495 | None:intergenic |
GCTCTGCTAAATAGTTTGCC+AGG | 0.535403 | 1.4:-9169129 | None:intergenic |
AGTGTCCTGCATTGAGAGCA+GGG | 0.537519 | 1.4:-9166609 | None:intergenic |
CTGCTGTGTTACTTGCCAGA+TGG | 0.539850 | 1.4:+9169206 | MS.gene021632:CDS |
ATCAACTTCTGAAGCTACAT+TGG | 0.548064 | 1.4:-9166468 | None:intergenic |
TTCGTTTGGTAATCAAACGT+TGG | 0.551985 | 1.4:-9167946 | None:intergenic |
GAATACTAGTGTATATATCA+GGG | 0.553135 | 1.4:-9167247 | None:intergenic |
AGTAGCACAAACTTCTTCCA+AGG | 0.554621 | 1.4:+9168845 | MS.gene021632:CDS |
TTGCAGCAAGACATCACTCC+CGG | 0.557538 | 1.4:+9167471 | MS.gene021632:CDS |
AAGAAAATGGTGTGAATGTG+AGG | 0.565412 | 1.4:+9165047 | MS.gene021632:CDS |
TCTGGTTGACTGGCTTGTGG+AGG | 0.565987 | 1.4:+9167506 | MS.gene021632:CDS |
GCAGATGCAGCTATCTTGGA+AGG | 0.568316 | 1.4:-9169187 | None:intergenic |
TCAACCAGTCAGAGCATCCG+TGG | 0.573235 | 1.4:+9169233 | MS.gene021632:CDS |
AGACATCACTCCCGGCATGA+GGG | 0.583884 | 1.4:+9167479 | MS.gene021632:CDS |
AAGACATCACTCCCGGCATG+AGG | 0.589789 | 1.4:+9167478 | MS.gene021632:CDS |
GAGGCCATTAGCCAATTACA+TGG | 0.590812 | 1.4:+9167443 | MS.gene021632:CDS |
ATGTGAGGGTGACTCGAGCA+AGG | 0.595779 | 1.4:+9165062 | MS.gene021632:CDS |
GGGAGTGATGTCTTGCTGCA+AGG | 0.604746 | 1.4:-9167469 | None:intergenic |
TCCTAGAAAAGAGATTCCAC+CGG | 0.607987 | 1.4:-9169652 | None:intergenic |
GACATCACTCCCGGCATGAG+GGG | 0.614351 | 1.4:+9167480 | MS.gene021632:CDS |
GATCAATGAGATTCACAGCA+AGG | 0.622155 | 1.4:-9167913 | None:intergenic |
GCAAGTTTGGACAACCAAAG+AGG | 0.622371 | 1.4:+9166499 | MS.gene021632:CDS |
GATTTGCAACTTAACACCAA+AGG | 0.622706 | 1.4:+9169422 | MS.gene021632:CDS |
TAATACATACTCCAGACAAG+AGG | 0.630206 | 1.4:+9168542 | MS.gene021632:CDS |
TGTCCTGCATTGAGAGCAGG+GGG | 0.630645 | 1.4:-9166607 | None:intergenic |
TGTGAGGGTGACTCGAGCAA+GGG | 0.633321 | 1.4:+9165063 | MS.gene021632:CDS |
AACGTTTGATTACCAAACGA+AGG | 0.634318 | 1.4:+9167948 | MS.gene021632:CDS |
CACTAGTATTCATGTCAGAG+AGG | 0.642881 | 1.4:+9167259 | MS.gene021632:CDS |
GAGAAACTAAGTGCCTCAGT+TGG | 0.643191 | 1.4:+9167164 | MS.gene021632:CDS |
CACAATTCCCAAGCCAACTG+AGG | 0.645149 | 1.4:-9167177 | None:intergenic |
CCTATGACAGTTCAATAGCG+TGG | 0.652934 | 1.4:+9169612 | MS.gene021632:intron |
AAATTTGTCTCCGAAACCGG+TGG | 0.653167 | 1.4:+9169636 | MS.gene021632:CDS |
GTGTCCTGCATTGAGAGCAG+GGG | 0.656805 | 1.4:-9166608 | None:intergenic |
AATCTCTCCAGTGTGAAAGG+AGG | 0.664729 | 1.4:+9167424 | MS.gene021632:intron |
CAACCAGTCAGAGCATCCGT+GGG | 0.669646 | 1.4:+9169234 | MS.gene021632:CDS |
AATACTAGTGTATATATCAG+GGG | 0.674606 | 1.4:-9167246 | None:intergenic |
AGAAAATGGTGTGAATGTGA+GGG | 0.707664 | 1.4:+9165048 | MS.gene021632:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATTATTATTATTATTATTA+TGG | + | chr1.4:9165236-9165255 | MS.gene021632:intron | 0.0% |
!! | AAAATATATACATAATTTCT+TGG | + | chr1.4:9165634-9165653 | MS.gene021632:intron | 10.0% |
!! | ATTATTATTATTATTGAGAT+TGG | + | chr1.4:9165270-9165289 | MS.gene021632:intron | 10.0% |
!! | AAATTCCTTAGTAATTTAAA+TGG | + | chr1.4:9165499-9165518 | MS.gene021632:intron | 15.0% |
!! | AGTTACAAATTAATTTAAAC+AGG | - | chr1.4:9166390-9166409 | None:intergenic | 15.0% |
!! | CATAATCACTAATATAATAA+GGG | - | chr1.4:9167605-9167624 | None:intergenic | 15.0% |
!!! | ACATTTCATATTTTTAAACT+TGG | - | chr1.4:9168174-9168193 | None:intergenic | 15.0% |
!!! | TATGAATTGAAATAATTTGT+AGG | + | chr1.4:9165330-9165349 | MS.gene021632:intron | 15.0% |
!!! | TTAATTTGTAACTATTGATT+TGG | + | chr1.4:9166397-9166416 | MS.gene021632:intron | 15.0% |
!!! | TTGTTATTTTTTATCTTGAT+TGG | + | chr1.4:9167115-9167134 | MS.gene021632:intron | 15.0% |
!! | AAATGAAAAATACCTGTATT+TGG | - | chr1.4:9166644-9166663 | None:intergenic | 20.0% |
!! | AACCAACAAATGAATATAAA+AGG | - | chr1.4:9165781-9165800 | None:intergenic | 20.0% |
!! | ACTGATAGTATAAATATACA+AGG | + | chr1.4:9166951-9166970 | MS.gene021632:intron | 20.0% |
!! | AGTAATTTAAATGGTTAACA+TGG | + | chr1.4:9165508-9165527 | MS.gene021632:intron | 20.0% |
!! | ATGTGAATCTAATTAGATTT+AGG | - | chr1.4:9169317-9169336 | None:intergenic | 20.0% |
!! | CTAATACTATGAATCTATAA+TGG | - | chr1.4:9167538-9167557 | None:intergenic | 20.0% |
!! | GCATAATCACTAATATAATA+AGG | - | chr1.4:9167606-9167625 | None:intergenic | 20.0% |
!! | GTTAACCATTTAAATTACTA+AGG | - | chr1.4:9165507-9165526 | None:intergenic | 20.0% |
!! | TAATGAAAGAACAATAGAAA+AGG | - | chr1.4:9169502-9169521 | None:intergenic | 20.0% |
!! | TTTAGTAAAACTTCAAATGA+TGG | - | chr1.4:9166001-9166020 | None:intergenic | 20.0% |
!! | TTTCATTTATTGGATATAAC+TGG | + | chr1.4:9166656-9166675 | MS.gene021632:intron | 20.0% |
!!! | AATGAGATTTTGTAAATCAT+TGG | + | chr1.4:9166338-9166357 | MS.gene021632:intron | 20.0% |
!!! | AATTGAATTGCATCAATTTT+TGG | + | chr1.4:9167809-9167828 | MS.gene021632:intron | 20.0% |
!!! | ATAAAAACAAGCATTTTGTA+TGG | + | chr1.4:9165378-9165397 | MS.gene021632:intron | 20.0% |
!!! | ATATTGATAGGTATTGAAAA+TGG | + | chr1.4:9168659-9168678 | MS.gene021632:intron | 20.0% |
!!! | ATATTTTAACACAATTTGAG+TGG | - | chr1.4:9165621-9165640 | None:intergenic | 20.0% |
!!! | GTAATTTTTTTTCTGTTATC+AGG | + | chr1.4:9169084-9169103 | MS.gene021632:intron | 20.0% |
!!! | GTGTGTTTTTTTTTTTCATT+TGG | + | chr1.4:9167297-9167316 | MS.gene021632:intron | 20.0% |
!!! | TACAGGTATTTTTCATTTAT+TGG | + | chr1.4:9166646-9166665 | MS.gene021632:intron | 20.0% |
!!! | TTTTTATTACGTACAATAGA+TGG | + | chr1.4:9165542-9165561 | MS.gene021632:intron | 20.0% |
! | AAAGGGAAACACATTTAATT+TGG | - | chr1.4:9169556-9169575 | None:intergenic | 25.0% |
! | AATAATAGCAAAGCAAAACT+TGG | - | chr1.4:9168273-9168292 | None:intergenic | 25.0% |
! | AATACTAGTGTATATATCAG+GGG | - | chr1.4:9167249-9167268 | None:intergenic | 25.0% |
! | AGCTTCTTCATTATGTTAAA+GGG | - | chr1.4:9169573-9169592 | None:intergenic | 25.0% |
! | AGTCAAATAGTTCTTAATCA+TGG | - | chr1.4:9166289-9166308 | None:intergenic | 25.0% |
! | CAACAAATGAATATAAAAGG+TGG | - | chr1.4:9165778-9165797 | None:intergenic | 25.0% |
! | GAATACTAGTGTATATATCA+GGG | - | chr1.4:9167250-9167269 | None:intergenic | 25.0% |
! | TAGCTTCTTCATTATGTTAA+AGG | - | chr1.4:9169574-9169593 | None:intergenic | 25.0% |
! | TAGTAATTACTAACTGAACA+AGG | + | chr1.4:9166927-9166946 | MS.gene021632:intron | 25.0% |
! | TCCTTAAAGTCAAATTTACA+CGG | + | chr1.4:9168079-9168098 | MS.gene021632:intron | 25.0% |
! | TGAATACTAGTGTATATATC+AGG | - | chr1.4:9167251-9167270 | None:intergenic | 25.0% |
! | TGTTGCATATATAAAAGAGT+TGG | + | chr1.4:9165845-9165864 | MS.gene021632:intron | 25.0% |
! | TTGAATGTGAAATGAGAAAT+AGG | - | chr1.4:9166837-9166856 | None:intergenic | 25.0% |
!! | AAAAGGCAATTATGTTTTCA+TGG | + | chr1.4:9166070-9166089 | MS.gene021632:intron | 25.0% |
!! | AATGATTGTGTACTTTGAAA+GGG | + | chr1.4:9166045-9166064 | MS.gene021632:intron | 25.0% |
!! | ATTTAAGATTAGTCCATGTT+TGG | - | chr1.4:9166106-9166125 | None:intergenic | 25.0% |
!! | CAATACTTTGTAATTTTCCT+AGG | + | chr1.4:9168016-9168035 | MS.gene021632:intron | 25.0% |
!! | CACCTTTTATATTCATTTGT+TGG | + | chr1.4:9165776-9165795 | MS.gene021632:intron | 25.0% |
!! | CATTCATGATCAAAATTTTG+TGG | - | chr1.4:9168348-9168367 | None:intergenic | 25.0% |
!! | CTCTATATTTTGTCCATAAA+AGG | + | chr1.4:9166307-9166326 | MS.gene021632:intron | 25.0% |
!! | GCAATTTAGTTTAAGCTTAA+TGG | + | chr1.4:9168782-9168801 | MS.gene021632:intron | 25.0% |
!! | TACTCATACATCAAATTTTG+AGG | + | chr1.4:9165180-9165199 | MS.gene021632:CDS | 25.0% |
!! | TCATTCAATTAGTCCTTTTA+TGG | - | chr1.4:9166323-9166342 | None:intergenic | 25.0% |
!!! | ATCAATTTTTGGCTGTTTAA+TGG | + | chr1.4:9167820-9167839 | MS.gene021632:intron | 25.0% |
!!! | CAAGAGGTATAAATAACTTT+TGG | + | chr1.4:9168558-9168577 | MS.gene021632:intron | 25.0% |
!!! | GAATTTTGATGTCAAACTTA+TGG | - | chr1.4:9165485-9165504 | None:intergenic | 25.0% |
!!! | GCTTTGTTATATTCTTTTTC+AGG | + | chr1.4:9167853-9167872 | MS.gene021632:intron | 25.0% |
!!! | GTGAATTCCTGATATTTTTT+CGG | + | chr1.4:9168231-9168250 | MS.gene021632:intron | 25.0% |
!!! | TCGCAATATAATGGTTTTAA+AGG | - | chr1.4:9166245-9166264 | None:intergenic | 25.0% |
!!! | TCTTCTTGATAAGTTGATAA+CGG | - | chr1.4:9168426-9168445 | None:intergenic | 25.0% |
!!! | TTCGGATATTTTAAATACCT+TGG | - | chr1.4:9168865-9168884 | None:intergenic | 25.0% |
!!! | TTCTTTTTTTCTTTCTTTCG+TGG | + | chr1.4:9168458-9168477 | MS.gene021632:intron | 25.0% |
AAAGGAAAATTCTAACCTTC+TGG | - | chr1.4:9169484-9169503 | None:intergenic | 30.0% | |
AACACAATTTGAGTGGTTAA+TGG | - | chr1.4:9165614-9165633 | None:intergenic | 30.0% | |
AACTTACTAAGAGACTGTTT+AGG | - | chr1.4:9167741-9167760 | None:intergenic | 30.0% | |
AATGAACAAGCTGTTGTTAT+TGG | + | chr1.4:9165112-9165131 | MS.gene021632:CDS | 30.0% | |
AATGGTTAACATGGTTCAAA+TGG | + | chr1.4:9165517-9165536 | MS.gene021632:intron | 30.0% | |
ACACATTTGAACTCAAATCA+TGG | - | chr1.4:9165690-9165709 | None:intergenic | 30.0% | |
ACGTACAATAGATGGTTAAA+CGG | + | chr1.4:9165550-9165569 | MS.gene021632:intron | 30.0% | |
AGTACACAATCATTGAGTTT+AGG | - | chr1.4:9166039-9166058 | None:intergenic | 30.0% | |
AGTTAAAGGATTCTCCTATT+TGG | + | chr1.4:9167213-9167232 | MS.gene021632:CDS | 30.0% | |
AGTTATTTATACCTCTTGTC+TGG | - | chr1.4:9168556-9168575 | None:intergenic | 30.0% | |
ATATAACTGGTATGCACTAT+CGG | + | chr1.4:9166669-9166688 | MS.gene021632:intron | 30.0% | |
ATGGTTAACATGGTTCAAAT+GGG | + | chr1.4:9165518-9165537 | MS.gene021632:intron | 30.0% | |
ATTACATGATGAGATGTGAT+TGG | + | chr1.4:9166772-9166791 | MS.gene021632:intron | 30.0% | |
CAAAGCAAAACTTGGTAAAT+CGG | - | chr1.4:9168265-9168284 | None:intergenic | 30.0% | |
CAATGATTGTGTACTTTGAA+AGG | + | chr1.4:9166044-9166063 | MS.gene021632:intron | 30.0% | |
TCTTAAATCTGTGTATGAGT+TGG | + | chr1.4:9166118-9166137 | MS.gene021632:intron | 30.0% | |
TGAAAAATATCAACACCAGA+AGG | + | chr1.4:9169466-9169485 | MS.gene021632:CDS | 30.0% | |
TGGATAATCTTAACCAAACA+TGG | + | chr1.4:9166090-9166109 | MS.gene021632:intron | 30.0% | |
TTGTAGTTAATTGTGTTGAG+TGG | + | chr1.4:9165735-9165754 | MS.gene021632:intron | 30.0% | |
TTTGATATTGCATCAAAACG+CGG | + | chr1.4:9166187-9166206 | MS.gene021632:intron | 30.0% | |
! | AACTAATGCCTTAGGATTTT+GGG | + | chr1.4:9165875-9165894 | MS.gene021632:intron | 30.0% |
! | ACCGTGTAAATTTGACTTTA+AGG | - | chr1.4:9168083-9168102 | None:intergenic | 30.0% |
! | ATCCTAAGGCATTAGTTATA+TGG | - | chr1.4:9165872-9165891 | None:intergenic | 30.0% |
! | ATGTGATTTTGCAGAAATGT+TGG | - | chr1.4:9165152-9165171 | None:intergenic | 30.0% |
! | TAACTAATGCCTTAGGATTT+TGG | + | chr1.4:9165874-9165893 | MS.gene021632:intron | 30.0% |
! | TACTCTTTTCTAACTCTTCA+TGG | - | chr1.4:9168302-9168321 | None:intergenic | 30.0% |
! | TACTTTGTAATTTTCCTAGG+TGG | + | chr1.4:9168019-9168038 | MS.gene021632:intron | 30.0% |
! | TCCTAAGGCATTAGTTATAT+GGG | - | chr1.4:9165871-9165890 | None:intergenic | 30.0% |
! | TGTACTTTGAAAGGGAAAAA+AGG | + | chr1.4:9166053-9166072 | MS.gene021632:intron | 30.0% |
!! | AAATAAGCTGAAAGTGCTTA+TGG | + | chr1.4:9167686-9167705 | MS.gene021632:intron | 30.0% |
!! | AAGTTGATGGTTAATGATGT+TGG | - | chr1.4:9165967-9165986 | None:intergenic | 30.0% |
!! | AGTTGATGGTTAATGATGTT+GGG | - | chr1.4:9165966-9165985 | None:intergenic | 30.0% |
!! | GAGTTTGTTTGTTTTCCTAA+TGG | - | chr1.4:9169055-9169074 | None:intergenic | 30.0% |
!! | GGTTAATTACGTTAAGTTGA+TGG | - | chr1.4:9165980-9165999 | None:intergenic | 30.0% |
AAATGTGTACTTGAAAGTCG+TGG | + | chr1.4:9165702-9165721 | MS.gene021632:intron | 35.0% | |
AACGTTTGATTACCAAACGA+AGG | + | chr1.4:9167948-9167967 | MS.gene021632:CDS | 35.0% | |
AACTTGCATCTGACATAATC+AGG | - | chr1.4:9168046-9168065 | None:intergenic | 35.0% | |
AAGAAAATGGTGTGAATGTG+AGG | + | chr1.4:9165047-9165066 | MS.gene021632:CDS | 35.0% | |
AATGAAGAAGCTAATGACAG+TGG | + | chr1.4:9169581-9169600 | MS.gene021632:intron | 35.0% | |
AATGTCTGATCTTCATCGAA+CGG | + | chr1.4:9168189-9168208 | MS.gene021632:intron | 35.0% | |
ACACAAAAATCTTCAACTCC+AGG | - | chr1.4:9168513-9168532 | None:intergenic | 35.0% | |
ACCTTCTTTCTTCTGTGTAA+TGG | - | chr1.4:9166432-9166451 | None:intergenic | 35.0% | |
AGAAAATGGTGTGAATGTGA+GGG | + | chr1.4:9165048-9165067 | MS.gene021632:CDS | 35.0% | |
AGTTAATTGTGTTGAGTGGA+TGG | + | chr1.4:9165739-9165758 | MS.gene021632:intron | 35.0% | |
AGTTTAACCACAGAGAGAAT+AGG | - | chr1.4:9169526-9169545 | None:intergenic | 35.0% | |
ATGCTACAAGACCACAATTA+AGG | - | chr1.4:9165918-9165937 | None:intergenic | 35.0% | |
CAACAATCAAGACATTTCTC+AGG | + | chr1.4:9168724-9168743 | MS.gene021632:CDS | 35.0% | |
CTGAGAAATGTCTTGATTGT+TGG | - | chr1.4:9168726-9168745 | None:intergenic | 35.0% | |
GATTTGCAACTTAACACCAA+AGG | + | chr1.4:9169422-9169441 | MS.gene021632:CDS | 35.0% | |
GCATAGTTAATCAGAACCTT+TGG | + | chr1.4:9168106-9168125 | MS.gene021632:intron | 35.0% | |
GGAACTATAACCATCTTCTT+TGG | + | chr1.4:9168803-9168822 | MS.gene021632:intron | 35.0% | |
GTTGCAAATCTATCAGTTCA+AGG | - | chr1.4:9169412-9169431 | None:intergenic | 35.0% | |
GTTTCCATGTAATTGGCTAA+TGG | - | chr1.4:9167450-9167469 | None:intergenic | 35.0% | |
TAATACATACTCCAGACAAG+AGG | + | chr1.4:9168542-9168561 | MS.gene021632:CDS | 35.0% | |
TCATTAACCTATTCTCTCTG+TGG | + | chr1.4:9169516-9169535 | MS.gene021632:intron | 35.0% | |
TCCATTACACAGAAGAAAGA+AGG | + | chr1.4:9166428-9166447 | MS.gene021632:intron | 35.0% | |
TGCTAGTAGCTTCTAATAGT+AGG | - | chr1.4:9167072-9167091 | None:intergenic | 35.0% | |
TGGTATCACAATGATGATTG+TGG | - | chr1.4:9166213-9166232 | None:intergenic | 35.0% | |
TTAAATCTCTCCAGTGTGAA+AGG | + | chr1.4:9167421-9167440 | MS.gene021632:intron | 35.0% | |
TTATGTCAGATGCAAGTTCT+TGG | + | chr1.4:9168048-9168067 | MS.gene021632:intron | 35.0% | |
TTATTTGCAGAATCCAACTC+TGG | + | chr1.4:9169343-9169362 | MS.gene021632:intron | 35.0% | |
TTGCTGACCGAAAAAATATC+AGG | - | chr1.4:9168241-9168260 | None:intergenic | 35.0% | |
! | GATGTTTTCATAAGCTATCC+CGG | + | chr1.4:9167652-9167671 | MS.gene021632:intron | 35.0% |
! | GGTATTGAAAATGGAGAAAG+AGG | + | chr1.4:9168668-9168687 | MS.gene021632:intron | 35.0% |
! | GTTGCTTTGTCTAAGAAACA+AGG | - | chr1.4:9167768-9167787 | None:intergenic | 35.0% |
! | TCGTTTGGTAATCAAACGTT+GGG | - | chr1.4:9167948-9167967 | None:intergenic | 35.0% |
! | TTCGTTTGGTAATCAAACGT+TGG | - | chr1.4:9167949-9167968 | None:intergenic | 35.0% |
! | TTTGTTGGTTGAAGTTTGTG+CGG | + | chr1.4:9165791-9165810 | MS.gene021632:intron | 35.0% |
!! | ATCAACTTCTGAAGCTACAT+TGG | - | chr1.4:9166471-9166490 | None:intergenic | 35.0% |
!! | CGTTGACTCTTGATATTGAT+AGG | + | chr1.4:9168647-9168666 | MS.gene021632:intron | 35.0% |
!! | GATAACGGAGAAAAAGAAGA+CGG | - | chr1.4:9168411-9168430 | None:intergenic | 35.0% |
!! | GGACATTGATTCGAAGTTAA+AGG | + | chr1.4:9167199-9167218 | MS.gene021632:CDS | 35.0% |
!! | GTTGATGGTTAATGATGTTG+GGG | - | chr1.4:9165965-9165984 | None:intergenic | 35.0% |
!! | TAATTGTGGTCTTGTAGCAT+TGG | + | chr1.4:9165918-9165937 | MS.gene021632:intron | 35.0% |
!!! | TCATGCTTATTTTGACCACA+GGG | - | chr1.4:9168895-9168914 | None:intergenic | 35.0% |
!!! | TTCATGCTTATTTTGACCAC+AGG | - | chr1.4:9168896-9168915 | None:intergenic | 35.0% |
ACTCTCAACTCTCCAAATAC+AGG | + | chr1.4:9166629-9166648 | MS.gene021632:CDS | 40.0% | |
AGTAGCACAAACTTCTTCCA+AGG | + | chr1.4:9168845-9168864 | MS.gene021632:CDS | 40.0% | |
AGTTAATGTTCACAGACCCA+CGG | - | chr1.4:9169253-9169272 | None:intergenic | 40.0% | |
CACTAGTATTCATGTCAGAG+AGG | + | chr1.4:9167259-9167278 | MS.gene021632:CDS | 40.0% | |
CGATTGTGGTCGCAATATAA+TGG | - | chr1.4:9166254-9166273 | None:intergenic | 40.0% | |
CTCTTTCTTTGCATCCTCTT+TGG | - | chr1.4:9166516-9166535 | None:intergenic | 40.0% | |
CTGCAAGGTTTCCATGTAAT+TGG | - | chr1.4:9167457-9167476 | None:intergenic | 40.0% | |
CTTATTTCCATAAGCTCACC+GGG | - | chr1.4:9167673-9167692 | None:intergenic | 40.0% | |
GATCAATGAGATTCACAGCA+AGG | - | chr1.4:9167916-9167935 | None:intergenic | 40.0% | |
GCCCATATAACTAATGCCTT+AGG | + | chr1.4:9165867-9165886 | MS.gene021632:intron | 40.0% | |
GCTTATTTCCATAAGCTCAC+CGG | - | chr1.4:9167674-9167693 | None:intergenic | 40.0% | |
GTCAGAATAGGCCTAAATTG+CGG | + | chr1.4:9166140-9166159 | MS.gene021632:intron | 40.0% | |
TATGAAGAGATTTGTGCTCC+TGG | + | chr1.4:9168492-9168511 | MS.gene021632:CDS | 40.0% | |
TCTAATGAGATCAGAACCGA+TGG | + | chr1.4:9168917-9168936 | MS.gene021632:intron | 40.0% | |
TGGTAATCAAACGTTGGGAA+AGG | - | chr1.4:9167943-9167962 | None:intergenic | 40.0% | |
TTGATGTCTCCTTGCAAGTT+TGG | + | chr1.4:9166486-9166505 | MS.gene021632:CDS | 40.0% | |
TTTGGTTGTCCAAACTTGCA+AGG | - | chr1.4:9166498-9166517 | None:intergenic | 40.0% | |
TTTGTATAGTGCTCCAGAGT+TGG | - | chr1.4:9169359-9169378 | None:intergenic | 40.0% | |
! | AATAGTTTGCCAGGAATTCC+AGG | - | chr1.4:9169123-9169142 | None:intergenic | 40.0% |
! | TAATGCCTTAGGATTTTGGG+TGG | + | chr1.4:9165878-9165897 | MS.gene021632:intron | 40.0% |
!! | AAAAGAGATTCCACCGGTTT+CGG | - | chr1.4:9169649-9169668 | None:intergenic | 40.0% |
!! | AACCATCTTCTTTGGCTTTC+AGG | + | chr1.4:9168811-9168830 | MS.gene021632:intron | 40.0% |
!! | GTGTATGAGTTGGTCAGAAT+AGG | + | chr1.4:9166128-9166147 | MS.gene021632:intron | 40.0% |
!!! | TATTTTGACCACAGGGAATC+TGG | - | chr1.4:9168888-9168907 | None:intergenic | 40.0% |
AAATTTGTCTCCGAAACCGG+TGG | + | chr1.4:9169636-9169655 | MS.gene021632:CDS | 45.0% | |
AATCTCTCCAGTGTGAAAGG+AGG | + | chr1.4:9167424-9167443 | MS.gene021632:intron | 45.0% | |
ACAGCAAGGTAAAGTGTGTC+TGG | - | chr1.4:9167902-9167921 | None:intergenic | 45.0% | |
ATTCACCGCAGTCAGTAAGT+TGG | - | chr1.4:9168217-9168236 | None:intergenic | 45.0% | |
CATCTCCACCCAAAATCCTA+AGG | - | chr1.4:9165886-9165905 | None:intergenic | 45.0% | |
CCACGCTATTGAACTGTCAT+AGG | - | chr1.4:9169615-9169634 | None:intergenic | 45.0% | |
CCTATGACAGTTCAATAGCG+TGG | + | chr1.4:9169612-9169631 | MS.gene021632:intron | 45.0% | |
CTCCTGAAAGCCAAAGAAGA+TGG | - | chr1.4:9168816-9168835 | None:intergenic | 45.0% | |
GAGAAACTAAGTGCCTCAGT+TGG | + | chr1.4:9167164-9167183 | MS.gene021632:CDS | 45.0% | |
GAGGCCATTAGCCAATTACA+TGG | + | chr1.4:9167443-9167462 | MS.gene021632:CDS | 45.0% | |
GCAAGTTTGGACAACCAAAG+AGG | + | chr1.4:9166499-9166518 | MS.gene021632:CDS | 45.0% | |
GCTCTATGAAGAAACTGGCA+CGG | - | chr1.4:9169020-9169039 | None:intergenic | 45.0% | |
GGCAAATTTGTCTCCGAAAC+CGG | + | chr1.4:9169633-9169652 | MS.gene021632:CDS | 45.0% | |
GGGGCATAAGAAGTCCAAAT+AGG | - | chr1.4:9167230-9167249 | None:intergenic | 45.0% | |
GGTTAATGATGTTGGGGAGT+CGG | - | chr1.4:9165959-9165978 | None:intergenic | 45.0% | |
GTGAACCAGTCTTGATCCAT+CGG | - | chr1.4:9168936-9168955 | None:intergenic | 45.0% | |
GTTAATGATGTTGGGGAGTC+GGG | - | chr1.4:9165958-9165977 | None:intergenic | 45.0% | |
TGACATAATCAGGACCACCT+AGG | - | chr1.4:9168036-9168055 | None:intergenic | 45.0% | |
TGCGGTGTCTACCTTAATTG+TGG | + | chr1.4:9165904-9165923 | MS.gene021632:intron | 45.0% | |
TTAATGATGTTGGGGAGTCG+GGG | - | chr1.4:9165957-9165976 | None:intergenic | 45.0% | |
! | GCTCTGCTAAATAGTTTGCC+AGG | - | chr1.4:9169132-9169151 | None:intergenic | 45.0% |
!! | AATTCTGGTTGACTGGCTTG+TGG | + | chr1.4:9167503-9167522 | MS.gene021632:CDS | 45.0% |
!! | AGCAAGGGCTAGAGTTTTGA+AGG | + | chr1.4:9165078-9165097 | MS.gene021632:CDS | 45.0% |
!! | CATCTTCTTTGGCTTTCAGG+AGG | + | chr1.4:9168814-9168833 | MS.gene021632:intron | 45.0% |
!! | TAGGATTTTGGGTGGAGATG+CGG | + | chr1.4:9165886-9165905 | MS.gene021632:intron | 45.0% |
!!! | GGTTTTAAAGGTCTCGACAG+TGG | - | chr1.4:9166233-9166252 | None:intergenic | 45.0% |
AAACGAAGGCTGCAGTTGCT+TGG | + | chr1.4:9167962-9167981 | MS.gene021632:CDS | 50.0% | |
AACCAGAATTCCCCTCATGC+CGG | - | chr1.4:9167493-9167512 | None:intergenic | 50.0% | |
AAGCAACTGCAGCCTTCGTT+TGG | - | chr1.4:9167963-9167982 | None:intergenic | 50.0% | |
AAGCTATCCCGGTGAGCTTA+TGG | + | chr1.4:9167663-9167682 | MS.gene021632:intron | 50.0% | |
ACTAAGTGCCTCAGTTGGCT+TGG | + | chr1.4:9167169-9167188 | MS.gene021632:CDS | 50.0% | |
AGTGTCCTGCATTGAGAGCA+GGG | - | chr1.4:9166612-9166631 | None:intergenic | 50.0% | |
CACAATTCCCAAGCCAACTG+AGG | - | chr1.4:9167180-9167199 | None:intergenic | 50.0% | |
CACAGAAGGTTGCACTTGCA+AGG | - | chr1.4:9166582-9166601 | None:intergenic | 50.0% | |
CACAGCAGATGCAGCTATCT+TGG | - | chr1.4:9169194-9169213 | None:intergenic | 50.0% | |
CAGAACCGATGGATCAAGAC+TGG | + | chr1.4:9168928-9168947 | MS.gene021632:intron | 50.0% | |
CTAATGGCCTCCTTTCACAC+TGG | - | chr1.4:9167434-9167453 | None:intergenic | 50.0% | |
CTGCAACTGTGCCGCAATTT+AGG | - | chr1.4:9166154-9166173 | None:intergenic | 50.0% | |
CTTGCAAGTGCAACCTTCTG+TGG | + | chr1.4:9166580-9166599 | MS.gene021632:CDS | 50.0% | |
GAGCTGTCTGACTCATCCAA+AGG | - | chr1.4:9168125-9168144 | None:intergenic | 50.0% | |
GCAGATGCAGCTATCTTGGA+AGG | - | chr1.4:9169190-9169209 | None:intergenic | 50.0% | |
GGTCTGCAAAGTTGCGATTG+TGG | - | chr1.4:9166268-9166287 | None:intergenic | 50.0% | |
TAATGATGTTGGGGAGTCGG+GGG | - | chr1.4:9165956-9165975 | None:intergenic | 50.0% | |
TATCCGAACCAGATTCCCTG+TGG | + | chr1.4:9168877-9168896 | MS.gene021632:intron | 50.0% | |
TCAAGCTGACCTGGAATTCC+TGG | + | chr1.4:9169111-9169130 | MS.gene021632:CDS | 50.0% | |
TGACCACAGGGAATCTGGTT+CGG | - | chr1.4:9168883-9168902 | None:intergenic | 50.0% | |
TTGCAGCAAGACATCACTCC+CGG | + | chr1.4:9167471-9167490 | MS.gene021632:CDS | 50.0% | |
! | AGCATTGAGACGACAGCCTT+TGG | - | chr1.4:9169441-9169460 | None:intergenic | 50.0% |
! | CGGTTCCAACTTACTGACTG+CGG | + | chr1.4:9168209-9168228 | MS.gene021632:intron | 50.0% |
! | CTAAGTGCCTCAGTTGGCTT+GGG | + | chr1.4:9167170-9167189 | MS.gene021632:CDS | 50.0% |
! | TGAGGGGAATTCTGGTTGAC+TGG | + | chr1.4:9167496-9167515 | MS.gene021632:CDS | 50.0% |
!! | CTCAGTTGGCTTGGGAATTG+TGG | + | chr1.4:9167178-9167197 | MS.gene021632:CDS | 50.0% |
!! | CTGCTGTGTTACTTGCCAGA+TGG | + | chr1.4:9169206-9169225 | MS.gene021632:CDS | 50.0% |
AAACCCCCTGCTCTCAATGC+AGG | + | chr1.4:9166604-9166623 | MS.gene021632:CDS | 55.0% | |
AAGACATCACTCCCGGCATG+AGG | + | chr1.4:9167478-9167497 | MS.gene021632:CDS | 55.0% | |
ACCAGAATTCCCCTCATGCC+GGG | - | chr1.4:9167492-9167511 | None:intergenic | 55.0% | |
AGACATCACTCCCGGCATGA+GGG | + | chr1.4:9167479-9167498 | MS.gene021632:CDS | 55.0% | |
ATGTGAGGGTGACTCGAGCA+AGG | + | chr1.4:9165062-9165081 | MS.gene021632:CDS | 55.0% | |
GAGTGTCCTGCATTGAGAGC+AGG | - | chr1.4:9166613-9166632 | None:intergenic | 55.0% | |
GGGAGTGATGTCTTGCTGCA+AGG | - | chr1.4:9167472-9167491 | None:intergenic | 55.0% | |
GTGTCCTGCATTGAGAGCAG+GGG | - | chr1.4:9166611-9166630 | None:intergenic | 55.0% | |
TGTCCTGCATTGAGAGCAGG+GGG | - | chr1.4:9166610-9166629 | None:intergenic | 55.0% | |
TGTGAGGGTGACTCGAGCAA+GGG | + | chr1.4:9165063-9165082 | MS.gene021632:CDS | 55.0% | |
! | ACGGATGCTCTGACTGGTTG+AGG | - | chr1.4:9169234-9169253 | None:intergenic | 55.0% |
! | AGCAGGGGGTTTTCCACAGA+AGG | - | chr1.4:9166596-9166615 | None:intergenic | 55.0% |
! | CAACCAGTCAGAGCATCCGT+GGG | + | chr1.4:9169234-9169253 | MS.gene021632:CDS | 55.0% |
! | CGGATGCTCTGACTGGTTGA+GGG | - | chr1.4:9169233-9169252 | None:intergenic | 55.0% |
! | TCAACCAGTCAGAGCATCCG+TGG | + | chr1.4:9169233-9169252 | MS.gene021632:CDS | 55.0% |
! | TCAGGTTGCTCAAGCTGACC+TGG | + | chr1.4:9169102-9169121 | MS.gene021632:intron | 55.0% |
! | TGACTGGTTGAGGGTCCATC+TGG | - | chr1.4:9169224-9169243 | None:intergenic | 55.0% |
!! | TCTGGTTGACTGGCTTGTGG+AGG | + | chr1.4:9167506-9167525 | MS.gene021632:CDS | 55.0% |
AGACCCACGGATGCTCTGAC+TGG | - | chr1.4:9169240-9169259 | None:intergenic | 60.0% | |
GACATCACTCCCGGCATGAG+GGG | + | chr1.4:9167480-9167499 | MS.gene021632:CDS | 60.0% | |
TCCCGGCATGAGGGGAATTC+TGG | + | chr1.4:9167488-9167507 | MS.gene021632:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 9165040 | 9169672 | 9165040 | ID=MS.gene021632 |
chr1.4 | mRNA | 9165040 | 9169672 | 9165040 | ID=MS.gene021632.t1;Parent=MS.gene021632 |
chr1.4 | exon | 9165040 | 9165201 | 9165040 | ID=MS.gene021632.t1.exon1;Parent=MS.gene021632.t1 |
chr1.4 | CDS | 9165040 | 9165201 | 9165040 | ID=cds.MS.gene021632.t1;Parent=MS.gene021632.t1 |
chr1.4 | exon | 9166440 | 9166650 | 9166440 | ID=MS.gene021632.t1.exon2;Parent=MS.gene021632.t1 |
chr1.4 | CDS | 9166440 | 9166650 | 9166440 | ID=cds.MS.gene021632.t1;Parent=MS.gene021632.t1 |
chr1.4 | exon | 9167147 | 9167280 | 9167147 | ID=MS.gene021632.t1.exon3;Parent=MS.gene021632.t1 |
chr1.4 | CDS | 9167147 | 9167280 | 9167147 | ID=cds.MS.gene021632.t1;Parent=MS.gene021632.t1 |
chr1.4 | exon | 9167435 | 9167527 | 9167435 | ID=MS.gene021632.t1.exon4;Parent=MS.gene021632.t1 |
chr1.4 | CDS | 9167435 | 9167527 | 9167435 | ID=cds.MS.gene021632.t1;Parent=MS.gene021632.t1 |
chr1.4 | exon | 9167875 | 9168008 | 9167875 | ID=MS.gene021632.t1.exon5;Parent=MS.gene021632.t1 |
chr1.4 | CDS | 9167875 | 9168008 | 9167875 | ID=cds.MS.gene021632.t1;Parent=MS.gene021632.t1 |
chr1.4 | exon | 9168488 | 9168563 | 9168488 | ID=MS.gene021632.t1.exon6;Parent=MS.gene021632.t1 |
chr1.4 | CDS | 9168488 | 9168563 | 9168488 | ID=cds.MS.gene021632.t1;Parent=MS.gene021632.t1 |
chr1.4 | exon | 9168669 | 9168745 | 9168669 | ID=MS.gene021632.t1.exon7;Parent=MS.gene021632.t1 |
chr1.4 | CDS | 9168669 | 9168745 | 9168669 | ID=cds.MS.gene021632.t1;Parent=MS.gene021632.t1 |
chr1.4 | exon | 9168833 | 9168866 | 9168833 | ID=MS.gene021632.t1.exon8;Parent=MS.gene021632.t1 |
chr1.4 | CDS | 9168833 | 9168866 | 9168833 | ID=cds.MS.gene021632.t1;Parent=MS.gene021632.t1 |
chr1.4 | exon | 9169106 | 9169255 | 9169106 | ID=MS.gene021632.t1.exon9;Parent=MS.gene021632.t1 |
chr1.4 | CDS | 9169106 | 9169255 | 9169106 | ID=cds.MS.gene021632.t1;Parent=MS.gene021632.t1 |
chr1.4 | exon | 9169353 | 9169487 | 9169353 | ID=MS.gene021632.t1.exon10;Parent=MS.gene021632.t1 |
chr1.4 | CDS | 9169353 | 9169487 | 9169353 | ID=cds.MS.gene021632.t1;Parent=MS.gene021632.t1 |
chr1.4 | exon | 9169622 | 9169672 | 9169622 | ID=MS.gene021632.t1.exon11;Parent=MS.gene021632.t1 |
chr1.4 | CDS | 9169622 | 9169672 | 9169622 | ID=cds.MS.gene021632.t1;Parent=MS.gene021632.t1 |
Gene Sequence |
Protein sequence |