Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024486.t1 | XP_003626516.2 | 92.3 | 117 | 9 | 0 | 1 | 117 | 1 | 117 | 1.50E-60 | 241.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024486.t1 | Q9CQZ7 | 39.5 | 114 | 60 | 3 | 3 | 116 | 4 | 108 | 3.9e-17 | 89.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024486.t1 | G7L310 | 92.3 | 117 | 9 | 0 | 1 | 117 | 1 | 117 | 1.1e-60 | 241.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene024486 | MS.gene64653 | PPI |
| MS.gene024486 | MS.gene050602 | PPI |
| MS.gene024486 | MS.gene65289 | PPI |
| MS.gene024486 | MS.gene22836 | PPI |
| MS.gene024486 | MS.gene81051 | PPI |
| MS.gene90078 | MS.gene024486 | PPI |
| MS.gene024486 | MS.gene004126 | PPI |
| MS.gene54479 | MS.gene024486 | PPI |
| MS.gene024486 | MS.gene025949 | PPI |
| MS.gene024486 | MS.gene049824 | PPI |
| MS.gene024486 | MS.gene058216 | PPI |
| MS.gene025949 | MS.gene024486 | PPI |
| MS.gene00182 | MS.gene024486 | PPI |
| MS.gene024486 | MS.gene24295 | PPI |
| MS.gene024486 | MS.gene049822 | PPI |
| MS.gene024486 | MS.gene26950 | PPI |
| MS.gene024486 | MS.gene051008 | PPI |
| MS.gene80957 | MS.gene024486 | PPI |
| MS.gene024486 | MS.gene00182 | PPI |
| MS.gene024486 | MS.gene27326 | PPI |
| MS.gene058216 | MS.gene024486 | PPI |
| MS.gene024486 | MS.gene54479 | PPI |
| MS.gene024486 | MS.gene65249 | PPI |
| MS.gene024486 | MS.gene56011 | PPI |
| MS.gene024486 | MS.gene08465 | PPI |
| MS.gene024486 | MS.gene027891 | PPI |
| MS.gene024486 | MS.gene004127 | PPI |
| MS.gene024486 | MS.gene036302 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024486.t1 | MTR_7g116750 | 92.308 | 117 | 9 | 0 | 1 | 117 | 1 | 117 | 1.43e-79 | 229 |
| MS.gene024486.t1 | MTR_5g030180 | 87.069 | 116 | 14 | 1 | 1 | 116 | 14 | 128 | 7.92e-73 | 213 |
| MS.gene024486.t1 | MTR_5g030180 | 87.069 | 116 | 14 | 1 | 1 | 116 | 1 | 115 | 8.98e-73 | 212 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024486.t1 | AT4G07950 | 43.966 | 116 | 54 | 4 | 1 | 116 | 1 | 105 | 7.70e-29 | 100 |
| MS.gene024486.t1 | AT1G01210 | 42.241 | 116 | 56 | 3 | 1 | 116 | 1 | 105 | 4.61e-28 | 99.0 |
| MS.gene024486.t1 | AT1G01210 | 42.241 | 116 | 56 | 3 | 1 | 116 | 1 | 105 | 4.61e-28 | 99.0 |
| MS.gene024486.t1 | AT1G01210 | 42.241 | 116 | 56 | 3 | 1 | 116 | 1 | 105 | 4.61e-28 | 99.0 |
Find 37 sgRNAs with CRISPR-Local
Find 128 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTGAGGATGGCGACAATT+TGG | 0.237510 | 7.2:-1309346 | None:intergenic |
| ATTTCATCATGGGAGATAAT+AGG | 0.283528 | 7.2:-1307828 | None:intergenic |
| GCCTGGATTGGGCAAATATA+TGG | 0.304407 | 7.2:-1307657 | None:intergenic |
| CTTGAGGATGGCGACAATTT+GGG | 0.324696 | 7.2:-1309345 | None:intergenic |
| CACTCGTAAAATATTGTTGC+AGG | 0.338187 | 7.2:-1309406 | None:intergenic |
| TAACATACCCCTGCCTGGAT+TGG | 0.394502 | 7.2:-1307669 | None:intergenic |
| TTTCATCATGGGAGATAATA+GGG | 0.399931 | 7.2:-1307827 | None:intergenic |
| AAAGTAGTACTGTCGGCTTT+TGG | 0.405726 | 7.2:-1307864 | None:intergenic |
| AACATACCCCTGCCTGGATT+GGG | 0.431360 | 7.2:-1307668 | None:intergenic |
| TCCATATATTTGCCCAATCC+AGG | 0.439317 | 7.2:+1307656 | MS.gene024486:CDS |
| ATTCTTGTTGATTTCATCAT+GGG | 0.448511 | 7.2:-1307838 | None:intergenic |
| TATTCTTGTTGATTTCATCA+TGG | 0.453333 | 7.2:-1307839 | None:intergenic |
| GTGCCGTGACTCGTAGTATT+GGG | 0.460519 | 7.2:-1307600 | None:intergenic |
| ATATTTATCCCTCCTTCCAC+TGG | 0.465128 | 7.2:-1309450 | None:intergenic |
| AGAGAAGGCAAATGCTCGTC+AGG | 0.467028 | 7.2:+1307793 | MS.gene024486:CDS |
| TGTGCCGTGACTCGTAGTAT+TGG | 0.489174 | 7.2:-1307601 | None:intergenic |
| TATATTTGCCCAATCCAGGC+AGG | 0.490476 | 7.2:+1307660 | MS.gene024486:CDS |
| GGCAAATGCTCGTCAGGAAA+GGG | 0.498231 | 7.2:+1307799 | MS.gene024486:CDS |
| GTACATAACATACCCCTGCC+TGG | 0.528478 | 7.2:-1307674 | None:intergenic |
| AGGCAAATGCTCGTCAGGAA+AGG | 0.543690 | 7.2:+1307798 | MS.gene024486:CDS |
| TCCTCAAGCTAGTTATCGCA+TGG | 0.558375 | 7.2:+1309360 | MS.gene024486:CDS |
| TCAGCATGCTCCCACACATA+GGG | 0.562374 | 7.2:-1307566 | None:intergenic |
| ATCAGCATGCTCCCACACAT+AGG | 0.581470 | 7.2:-1307567 | None:intergenic |
| TACAGGTTAAGATTAAGAGA+AGG | 0.585633 | 7.2:+1307778 | MS.gene024486:intron |
| TGCGATAACTAGCTTGAGGA+TGG | 0.595177 | 7.2:-1309357 | None:intergenic |
| TGTGGACACCAGTGGAAGGA+GGG | 0.602718 | 7.2:+1309442 | MS.gene024486:CDS |
| ATATTTGCCCAATCCAGGCA+GGG | 0.610625 | 7.2:+1307661 | MS.gene024486:CDS |
| GGATGGCGACAATTTGGGCA+AGG | 0.613537 | 7.2:-1309340 | None:intergenic |
| GTGTGGACACCAGTGGAAGG+AGG | 0.617591 | 7.2:+1309441 | MS.gene024486:CDS |
| TATTTGCCCAATCCAGGCAG+GGG | 0.628783 | 7.2:+1307662 | MS.gene024486:CDS |
| TTACCCAATACTACGAGTCA+CGG | 0.630549 | 7.2:+1307597 | MS.gene024486:CDS |
| TCCATGCGATAACTAGCTTG+AGG | 0.632752 | 7.2:-1309361 | None:intergenic |
| AAAGTGTGGACACCAGTGGA+AGG | 0.634668 | 7.2:+1309438 | MS.gene024486:CDS |
| ATCAAAAGTGTGGACACCAG+TGG | 0.638482 | 7.2:+1309434 | MS.gene024486:CDS |
| GGCAAATATATGGACAAGTG+AGG | 0.649591 | 7.2:-1307647 | None:intergenic |
| ACGGCACATCTCATCGCACA+AGG | 0.653666 | 7.2:+1307616 | MS.gene024486:CDS |
| GAGTGCTTGAATCAAAAGTG+TGG | 0.674641 | 7.2:+1309424 | MS.gene024486:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAGAGGAA+TGG | - | chr7.2:1309309-1309328 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAAAAGAGGAAT+GGG | - | chr7.2:1309308-1309327 | None:intergenic | 15.0% |
| !!! | AATTAACATTTTTTATGGTT+TGG | + | chr7.2:1308775-1308794 | MS.gene024486:intron | 15.0% |
| !! | AAAGAAATAACAAAGAAACA+AGG | - | chr7.2:1309250-1309269 | None:intergenic | 20.0% |
| !! | AATTAACATTGTTTATGGTT+TGG | + | chr7.2:1308910-1308929 | MS.gene024486:intron | 20.0% |
| !! | AGAAAAGGAAGAAATAAAAA+TGG | - | chr7.2:1309283-1309302 | None:intergenic | 20.0% |
| !! | TTCTTAAAAGCTCATAAATA+TGG | - | chr7.2:1308377-1308396 | None:intergenic | 20.0% |
| !! | TTGTGAATTAACATTGTTTA+TGG | + | chr7.2:1308905-1308924 | MS.gene024486:intron | 20.0% |
| !!! | AATACTGTTTGTTTTTGTTA+AGG | + | chr7.2:1309203-1309222 | MS.gene024486:intron | 20.0% |
| !!! | ATACATGATAAAAGTATTAC+AGG | - | chr7.2:1308263-1308282 | None:intergenic | 20.0% |
| !!! | ATACTGTTTGTTTTTGTTAA+GGG | + | chr7.2:1309204-1309223 | MS.gene024486:intron | 20.0% |
| !!! | ATCATGTTTTTTTACTTTAC+AGG | + | chr7.2:1307761-1307780 | MS.gene024486:intron | 20.0% |
| !!! | CTTTTCTTTTACATGATTTA+CGG | + | chr7.2:1308733-1308752 | MS.gene024486:intron | 20.0% |
| !!! | TAATACTGTTTTGTTCTTTT+TGG | + | chr7.2:1309170-1309189 | MS.gene024486:intron | 20.0% |
| !!! | TGTCTTTTTTACATGATTTA+CGG | + | chr7.2:1309003-1309022 | MS.gene024486:intron | 20.0% |
| !!! | TGTCTTTTTTACATGATTTT+CGG | + | chr7.2:1308868-1308887 | MS.gene024486:intron | 20.0% |
| !!! | TTGCGAATTAACATTTTTTA+TGG | + | chr7.2:1308770-1308789 | MS.gene024486:intron | 20.0% |
| ! | AACTAATTGGGTAATAGAAA+TGG | - | chr7.2:1307713-1307732 | None:intergenic | 25.0% |
| ! | AAGAAAGAAAGATGAATTGA+AGG | - | chr7.2:1307737-1307756 | None:intergenic | 25.0% |
| ! | AGAACAAAACAGTATTACAA+CGG | - | chr7.2:1309167-1309186 | None:intergenic | 25.0% |
| ! | ATAGCTTAAAAGTTCCTATT+AGG | - | chr7.2:1308496-1308515 | None:intergenic | 25.0% |
| ! | ATGAATTGAAGGTAACTAAT+TGG | - | chr7.2:1307726-1307745 | None:intergenic | 25.0% |
| ! | CATAAACCTTCCAAATATAT+TGG | - | chr7.2:1308214-1308233 | None:intergenic | 25.0% |
| ! | CATATCAAATTTCTGTGATT+TGG | + | chr7.2:1308322-1308341 | MS.gene024486:intron | 25.0% |
| ! | CTTTAGTCAATAAGATAAGA+GGG | - | chr7.2:1308089-1308108 | None:intergenic | 25.0% |
| ! | GAGGGAAAAAAAAAAAAAAG+AGG | - | chr7.2:1309314-1309333 | None:intergenic | 25.0% |
| ! | GATATAACTCCTAATAAGAA+TGG | + | chr7.2:1308534-1308553 | MS.gene024486:intron | 25.0% |
| ! | TAAAAGAAAAGTAGTACTGT+CGG | - | chr7.2:1307874-1307893 | None:intergenic | 25.0% |
| ! | TAAACTCAAAAGTTCCTATT+AGG | - | chr7.2:1308663-1308682 | None:intergenic | 25.0% |
| ! | TCTTTAGTCAATAAGATAAG+AGG | - | chr7.2:1308090-1308109 | None:intergenic | 25.0% |
| ! | TGAATTGAAGGTAACTAATT+GGG | - | chr7.2:1307725-1307744 | None:intergenic | 25.0% |
| ! | TTTAGTCAATAAGATAAGAG+GGG | - | chr7.2:1308088-1308107 | None:intergenic | 25.0% |
| ! | TTTGATTATCAACTCCTAAT+AGG | + | chr7.2:1308454-1308473 | MS.gene024486:intron | 25.0% |
| ! | TTTGATTATCAACTCCTAAT+TGG | + | chr7.2:1308454-1308473 | MS.gene024486:intron | 25.0% |
| !! | AACTGATTGTACTAGTTTAT+TGG | + | chr7.2:1308027-1308046 | MS.gene024486:intron | 25.0% |
| !! | ATTTATGGTCTTTAAGAAGT+AGG | + | chr7.2:1308572-1308591 | MS.gene024486:intron | 25.0% |
| !! | GAAATTTGATATGTATTGAC+AGG | - | chr7.2:1308315-1308334 | None:intergenic | 25.0% |
| !! | TTTATGGTCTTTAAGAAGTA+GGG | + | chr7.2:1308573-1308592 | MS.gene024486:intron | 25.0% |
| !!! | ATTCTTGTTGATTTCATCAT+GGG | - | chr7.2:1307841-1307860 | None:intergenic | 25.0% |
| !!! | GTGATTTGGTTTTAACTTTA+AGG | + | chr7.2:1308336-1308355 | MS.gene024486:intron | 25.0% |
| !!! | TATTCTTGTTGATTTCATCA+TGG | - | chr7.2:1307842-1307861 | None:intergenic | 25.0% |
| !!! | TTATGAGCTTTTAAGAAGTA+GGG | + | chr7.2:1308380-1308399 | MS.gene024486:intron | 25.0% |
| !!! | TTTATGAGCTTTTAAGAAGT+AGG | + | chr7.2:1308379-1308398 | MS.gene024486:intron | 25.0% |
| !!! | TTTGGTTTTAACTTTAAGGA+CGG | + | chr7.2:1308340-1308359 | MS.gene024486:intron | 25.0% |
| AAGTATTACAGGCTTAGATT+TGG | - | chr7.2:1308252-1308271 | None:intergenic | 30.0% | |
| AATTAACATTGTTCGTGGTT+TGG | + | chr7.2:1309045-1309064 | MS.gene024486:intron | 30.0% | |
| AGCAAGACAAACTTAATACA+AGG | - | chr7.2:1308690-1308709 | None:intergenic | 30.0% | |
| ATCTAATGCAAAGGGATAAA+TGG | + | chr7.2:1308131-1308150 | MS.gene024486:intron | 30.0% | |
| ATTTCATCATGGGAGATAAT+AGG | - | chr7.2:1307831-1307850 | None:intergenic | 30.0% | |
| TACAGGTTAAGATTAAGAGA+AGG | + | chr7.2:1307778-1307797 | MS.gene024486:intron | 30.0% | |
| TATGCTCAAAGCTGTATTTA+TGG | + | chr7.2:1308557-1308576 | MS.gene024486:intron | 30.0% | |
| TCTAATGCAAAGGGATAAAT+GGG | + | chr7.2:1308132-1308151 | MS.gene024486:intron | 30.0% | |
| TGAATGTGATCTAATGCAAA+GGG | + | chr7.2:1308123-1308142 | MS.gene024486:intron | 30.0% | |
| TTGAATGTGATCTAATGCAA+AGG | + | chr7.2:1308122-1308141 | MS.gene024486:intron | 30.0% | |
| TTGAGCATACCATTCTTATT+AGG | - | chr7.2:1308546-1308565 | None:intergenic | 30.0% | |
| TTGAGGTCATCCAATATATT+TGG | + | chr7.2:1308201-1308220 | MS.gene024486:intron | 30.0% | |
| TTGTGAATTAACATTGTTCG+TGG | + | chr7.2:1309040-1309059 | MS.gene024486:intron | 30.0% | |
| TTTCATCATGGGAGATAATA+GGG | - | chr7.2:1307830-1307849 | None:intergenic | 30.0% | |
| ! | CATGTAAAAGAAAAGCACAA+TGG | - | chr7.2:1308728-1308747 | None:intergenic | 30.0% |
| !! | TATGAGCTTTTAAGAAGTAG+GGG | + | chr7.2:1308381-1308400 | MS.gene024486:intron | 30.0% |
| !! | TTATGGTTTGGTTATATGAG+CGG | + | chr7.2:1308787-1308806 | MS.gene024486:intron | 30.0% |
| CACTCGTAAAATATTGTTGC+AGG | - | chr7.2:1309409-1309428 | None:intergenic | 35.0% | |
| CTAATGCAAAGGGATAAATG+GGG | + | chr7.2:1308133-1308152 | MS.gene024486:intron | 35.0% | |
| GGTCATCCAATATATTTGGA+AGG | + | chr7.2:1308205-1308224 | MS.gene024486:intron | 35.0% | |
| TACATGATTTACGGTTTGAG+CGG | + | chr7.2:1308742-1308761 | MS.gene024486:intron | 35.0% | |
| TTGACTCAACAGTTCCAATT+AGG | - | chr7.2:1308471-1308490 | None:intergenic | 35.0% | |
| ! | TATTTTTCCTAGCACTGTTG+AGG | + | chr7.2:1308184-1308203 | MS.gene024486:intron | 35.0% |
| ! | TCATTGTGGACTTGTTTACT+TGG | + | chr7.2:1307941-1307960 | MS.gene024486:intron | 35.0% |
| ! | TGTACTAGTTTATTGGACGT+TGG | + | chr7.2:1308034-1308053 | MS.gene024486:intron | 35.0% |
| !! | TACATGATTTTCGGTTTGAG+CGG | + | chr7.2:1308877-1308896 | MS.gene024486:intron | 35.0% |
| AAAGAGGAATGGGTGAGAAA+AGG | - | chr7.2:1309298-1309317 | None:intergenic | 40.0% | |
| AAGTAGGGAAGTAGAAGTCA+TGG | + | chr7.2:1308588-1308607 | MS.gene024486:intron | 40.0% | |
| AGTCCACAATGAGCTAAAGA+AGG | - | chr7.2:1307933-1307952 | None:intergenic | 40.0% | |
| CTGTTGAGTCAACTCCTAAT+AGG | + | chr7.2:1308479-1308498 | MS.gene024486:intron | 40.0% | |
| GAGTGCTTGAATCAAAAGTG+TGG | + | chr7.2:1309424-1309443 | MS.gene024486:CDS | 40.0% | |
| GGCAAATATATGGACAAGTG+AGG | - | chr7.2:1307650-1307669 | None:intergenic | 40.0% | |
| TCCATATATTTGCCCAATCC+AGG | + | chr7.2:1307656-1307675 | MS.gene024486:CDS | 40.0% | |
| TTACCCAATACTACGAGTCA+CGG | + | chr7.2:1307597-1307616 | MS.gene024486:CDS | 40.0% | |
| ! | CATCCTTCTTTAGCTCATTG+TGG | + | chr7.2:1307927-1307946 | MS.gene024486:intron | 40.0% |
| ! | TGGGGCTTTAGTTTAGTGTA+AGG | + | chr7.2:1308151-1308170 | MS.gene024486:intron | 40.0% |
| ! | TTCAACCACCGTTTTGTCTA+GGG | + | chr7.2:1308810-1308829 | MS.gene024486:intron | 40.0% |
| !! | TCGTGGTTTGGTTATTTGAG+CGG | + | chr7.2:1309057-1309076 | MS.gene024486:intron | 40.0% |
| !!! | AAAGTAGTACTGTCGGCTTT+TGG | - | chr7.2:1307867-1307886 | None:intergenic | 40.0% |
| ATATTTGCCCAATCCAGGCA+GGG | + | chr7.2:1307661-1307680 | MS.gene024486:CDS | 45.0% | |
| CTCAAACCAAGACAGAACAG+TGG | - | chr7.2:1309088-1309107 | None:intergenic | 45.0% | |
| CTTGAGGATGGCGACAATTT+GGG | - | chr7.2:1309348-1309367 | None:intergenic | 45.0% | |
| GTTCAACCACTGTTCTGTCT+TGG | + | chr7.2:1309079-1309098 | MS.gene024486:intron | 45.0% | |
| TATATTTGCCCAATCCAGGC+AGG | + | chr7.2:1307660-1307679 | MS.gene024486:CDS | 45.0% | |
| TATTACAACGGACATCGAGC+AGG | - | chr7.2:1309155-1309174 | None:intergenic | 45.0% | |
| TCCTCAAGCTAGTTATCGCA+TGG | + | chr7.2:1309360-1309379 | MS.gene024486:CDS | 45.0% | |
| ! | AATTTGGGCAAGGTACTAGG+AGG | - | chr7.2:1309333-1309352 | None:intergenic | 45.0% |
| ! | AGTAGGGGAAGTATAAGTCG+TGG | + | chr7.2:1308396-1308415 | MS.gene024486:intron | 45.0% |
| ! | ATCAAAAGTGTGGACACCAG+TGG | + | chr7.2:1309434-1309453 | MS.gene024486:CDS | 45.0% |
| ! | ATGGAGTTTTGCCCTATGTG+TGG | + | chr7.2:1307555-1307574 | MS.gene024486:CDS | 45.0% |
| ! | ATTTGGGCAAGGTACTAGGA+GGG | - | chr7.2:1309332-1309351 | None:intergenic | 45.0% |
| ! | CTGTTCTGTCTTGGTTTGAG+CGG | + | chr7.2:1309088-1309107 | MS.gene024486:intron | 45.0% |
| ! | GACAATTTGGGCAAGGTACT+AGG | - | chr7.2:1309336-1309355 | None:intergenic | 45.0% |
| ! | GCCTGGATTGGGCAAATATA+TGG | - | chr7.2:1307660-1307679 | None:intergenic | 45.0% |
| ! | GTTCAACCACCGTTTTGTCT+AGG | + | chr7.2:1308809-1308828 | MS.gene024486:intron | 45.0% |
| ! | TCCATGCGATAACTAGCTTG+AGG | - | chr7.2:1309364-1309383 | None:intergenic | 45.0% |
| ! | TGCGATAACTAGCTTGAGGA+TGG | - | chr7.2:1309360-1309379 | None:intergenic | 45.0% |
| ! | TGGAGTTTTGCCCTATGTGT+GGG | + | chr7.2:1307556-1307575 | MS.gene024486:CDS | 45.0% |
| AAAGTGTGGACACCAGTGGA+AGG | + | chr7.2:1309438-1309457 | MS.gene024486:CDS | 50.0% | |
| AACATACCCCTGCCTGGATT+GGG | - | chr7.2:1307671-1307690 | None:intergenic | 50.0% | |
| AGAGAAGGCAAATGCTCGTC+AGG | + | chr7.2:1307793-1307812 | MS.gene024486:CDS | 50.0% | |
| AGGCAAATGCTCGTCAGGAA+AGG | + | chr7.2:1307798-1307817 | MS.gene024486:CDS | 50.0% | |
| ATCAGCATGCTCCCACACAT+AGG | - | chr7.2:1307570-1307589 | None:intergenic | 50.0% | |
| CCGCTTGACCCTAGACAAAA+CGG | - | chr7.2:1308956-1308975 | None:intergenic | 50.0% | |
| CTTGACCCTAGACAAAACGG+TGG | - | chr7.2:1308953-1308972 | None:intergenic | 50.0% | |
| GCTTGAGGATGGCGACAATT+TGG | - | chr7.2:1309349-1309368 | None:intergenic | 50.0% | |
| GGCAAATGCTCGTCAGGAAA+GGG | + | chr7.2:1307799-1307818 | MS.gene024486:CDS | 50.0% | |
| GGGAAGTAGAAGTCATGGTC+TGG | + | chr7.2:1308593-1308612 | MS.gene024486:intron | 50.0% | |
| GTACATAACATACCCCTGCC+TGG | - | chr7.2:1307677-1307696 | None:intergenic | 50.0% | |
| GTGCCGTGACTCGTAGTATT+GGG | - | chr7.2:1307603-1307622 | None:intergenic | 50.0% | |
| TAACATACCCCTGCCTGGAT+TGG | - | chr7.2:1307672-1307691 | None:intergenic | 50.0% | |
| TATTTGCCCAATCCAGGCAG+GGG | + | chr7.2:1307662-1307681 | MS.gene024486:CDS | 50.0% | |
| TCAGCATGCTCCCACACATA+GGG | - | chr7.2:1307569-1307588 | None:intergenic | 50.0% | |
| TGGATGACCTCAACAGTGCT+AGG | - | chr7.2:1308194-1308213 | None:intergenic | 50.0% | |
| TGTGCCGTGACTCGTAGTAT+TGG | - | chr7.2:1307604-1307623 | None:intergenic | 50.0% | |
| ! | GGGAAGTATAAGTCGTGGTG+TGG | + | chr7.2:1308401-1308420 | MS.gene024486:intron | 50.0% |
| !! | CCGTTTTGTCTAGGGTCAAG+CGG | + | chr7.2:1308953-1308972 | MS.gene024486:intron | 50.0% |
| ACGGCACATCTCATCGCACA+AGG | + | chr7.2:1307616-1307635 | MS.gene024486:CDS | 55.0% | |
| CCGCTCGACCCTAGACAAAA+CGG | - | chr7.2:1308821-1308840 | None:intergenic | 55.0% | |
| CTCGACCCTAGACAAAACGG+TGG | - | chr7.2:1308818-1308837 | None:intergenic | 55.0% | |
| GGATGGCGACAATTTGGGCA+AGG | - | chr7.2:1309343-1309362 | None:intergenic | 55.0% | |
| TGTGGACACCAGTGGAAGGA+GGG | + | chr7.2:1309442-1309461 | MS.gene024486:CDS | 55.0% | |
| !! | CCGTTTTGTCTAGGGTCGAG+CGG | + | chr7.2:1308818-1308837 | MS.gene024486:intron | 55.0% |
| GTGTGGACACCAGTGGAAGG+AGG | + | chr7.2:1309441-1309460 | MS.gene024486:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 1307555 | 1309468 | 1307555 | ID=MS.gene024486 |
| chr7.2 | mRNA | 1307555 | 1309468 | 1307555 | ID=MS.gene024486.t1;Parent=MS.gene024486 |
| chr7.2 | exon | 1307555 | 1307683 | 1307555 | ID=MS.gene024486.t1.exon1;Parent=MS.gene024486.t1 |
| chr7.2 | CDS | 1307555 | 1307683 | 1307555 | ID=cds.MS.gene024486.t1;Parent=MS.gene024486.t1 |
| chr7.2 | exon | 1307783 | 1307876 | 1307783 | ID=MS.gene024486.t1.exon2;Parent=MS.gene024486.t1 |
| chr7.2 | CDS | 1307783 | 1307876 | 1307783 | ID=cds.MS.gene024486.t1;Parent=MS.gene024486.t1 |
| chr7.2 | exon | 1309338 | 1309468 | 1309338 | ID=MS.gene024486.t1.exon3;Parent=MS.gene024486.t1 |
| chr7.2 | CDS | 1309338 | 1309468 | 1309338 | ID=cds.MS.gene024486.t1;Parent=MS.gene024486.t1 |
| Gene Sequence |
| Protein sequence |
