Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025949.t1 | XP_003626516.2 | 92.3 | 117 | 9 | 0 | 1 | 117 | 1 | 117 | 1.50E-60 | 241.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025949.t1 | Q9CQZ7 | 39.5 | 114 | 60 | 3 | 3 | 116 | 4 | 108 | 3.9e-17 | 89.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025949.t1 | G7L310 | 92.3 | 117 | 9 | 0 | 1 | 117 | 1 | 117 | 1.1e-60 | 241.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene025949 | MS.gene050602 | PPI |
| MS.gene025949 | MS.gene65249 | PPI |
| MS.gene025949 | MS.gene56011 | PPI |
| MS.gene025949 | MS.gene027891 | PPI |
| MS.gene025949 | MS.gene004127 | PPI |
| MS.gene025949 | MS.gene036302 | PPI |
| MS.gene025949 | MS.gene004126 | PPI |
| MS.gene025949 | MS.gene64653 | PPI |
| MS.gene025949 | MS.gene049824 | PPI |
| MS.gene025949 | MS.gene058216 | PPI |
| MS.gene024486 | MS.gene025949 | PPI |
| MS.gene025949 | MS.gene65289 | PPI |
| MS.gene025949 | MS.gene024486 | PPI |
| MS.gene025949 | MS.gene24295 | PPI |
| MS.gene025949 | MS.gene26950 | PPI |
| MS.gene025949 | MS.gene22836 | PPI |
| MS.gene90078 | MS.gene025949 | PPI |
| MS.gene025949 | MS.gene051008 | PPI |
| MS.gene025949 | MS.gene81051 | PPI |
| MS.gene54479 | MS.gene025949 | PPI |
| MS.gene00182 | MS.gene025949 | PPI |
| MS.gene025949 | MS.gene27326 | PPI |
| MS.gene025949 | MS.gene049822 | PPI |
| MS.gene025949 | MS.gene54479 | PPI |
| MS.gene80957 | MS.gene025949 | PPI |
| MS.gene025949 | MS.gene08465 | PPI |
| MS.gene025949 | MS.gene00182 | PPI |
| MS.gene058216 | MS.gene025949 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025949.t1 | MTR_7g116750 | 92.308 | 117 | 9 | 0 | 1 | 117 | 1 | 117 | 1.43e-79 | 229 |
| MS.gene025949.t1 | MTR_5g030180 | 87.069 | 116 | 14 | 1 | 1 | 116 | 14 | 128 | 7.92e-73 | 213 |
| MS.gene025949.t1 | MTR_5g030180 | 87.069 | 116 | 14 | 1 | 1 | 116 | 1 | 115 | 8.98e-73 | 212 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025949.t1 | AT4G07950 | 43.966 | 116 | 54 | 4 | 1 | 116 | 1 | 105 | 7.70e-29 | 100 |
| MS.gene025949.t1 | AT1G01210 | 42.241 | 116 | 56 | 3 | 1 | 116 | 1 | 105 | 4.61e-28 | 99.0 |
| MS.gene025949.t1 | AT1G01210 | 42.241 | 116 | 56 | 3 | 1 | 116 | 1 | 105 | 4.61e-28 | 99.0 |
| MS.gene025949.t1 | AT1G01210 | 42.241 | 116 | 56 | 3 | 1 | 116 | 1 | 105 | 4.61e-28 | 99.0 |
Find 37 sgRNAs with CRISPR-Local
Find 129 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTGAGGATGGCGACAATT+TGG | 0.237510 | 7.1:-1283773 | None:intergenic |
| ATTTCATCATGGGAGATAAT+AGG | 0.283528 | 7.1:-1282257 | None:intergenic |
| GCCTGGATTGGGCAAATATA+TGG | 0.304407 | 7.1:-1282086 | None:intergenic |
| CTTGAGGATGGCGACAATTT+GGG | 0.324696 | 7.1:-1283772 | None:intergenic |
| CACTCGTAAAATATTGTTGC+AGG | 0.338187 | 7.1:-1283833 | None:intergenic |
| TAACATACCCCTGCCTGGAT+TGG | 0.394502 | 7.1:-1282098 | None:intergenic |
| TTTCATCATGGGAGATAATA+GGG | 0.399931 | 7.1:-1282256 | None:intergenic |
| AAAGTAGTACTGTCGGCTTT+TGG | 0.405726 | 7.1:-1282293 | None:intergenic |
| AACATACCCCTGCCTGGATT+GGG | 0.431360 | 7.1:-1282097 | None:intergenic |
| TCCATATATTTGCCCAATCC+AGG | 0.439317 | 7.1:+1282085 | MS.gene025949:CDS |
| ATTCTTGTTGATTTCATCAT+GGG | 0.448511 | 7.1:-1282267 | None:intergenic |
| TATTCTTGTTGATTTCATCA+TGG | 0.453333 | 7.1:-1282268 | None:intergenic |
| GTGCCGTGACTCGTAGTATT+GGG | 0.460519 | 7.1:-1282029 | None:intergenic |
| ATATTTATCCCTCCTTCCAC+TGG | 0.465128 | 7.1:-1283877 | None:intergenic |
| AGAGAAGGCAAATGCTCGTC+AGG | 0.467028 | 7.1:+1282222 | MS.gene025949:CDS |
| TGTGCCGTGACTCGTAGTAT+TGG | 0.489174 | 7.1:-1282030 | None:intergenic |
| TATATTTGCCCAATCCAGGC+AGG | 0.490476 | 7.1:+1282089 | MS.gene025949:CDS |
| GGCAAATGCTCGTCAGGAAA+GGG | 0.498231 | 7.1:+1282228 | MS.gene025949:CDS |
| GTACATAACATACCCCTGCC+TGG | 0.528478 | 7.1:-1282103 | None:intergenic |
| AGGCAAATGCTCGTCAGGAA+AGG | 0.543690 | 7.1:+1282227 | MS.gene025949:CDS |
| TCCTCAAGCTAGTTATCGCA+TGG | 0.558375 | 7.1:+1283787 | MS.gene025949:CDS |
| TCAGCATGCTCCCACACATA+GGG | 0.562374 | 7.1:-1281995 | None:intergenic |
| ATCAGCATGCTCCCACACAT+AGG | 0.581470 | 7.1:-1281996 | None:intergenic |
| TACAGGTTAAGATTAAGAGA+AGG | 0.585633 | 7.1:+1282207 | MS.gene025949:intron |
| TGCGATAACTAGCTTGAGGA+TGG | 0.595177 | 7.1:-1283784 | None:intergenic |
| TGTGGACACCAGTGGAAGGA+GGG | 0.602718 | 7.1:+1283869 | MS.gene025949:CDS |
| ATATTTGCCCAATCCAGGCA+GGG | 0.610625 | 7.1:+1282090 | MS.gene025949:CDS |
| GGATGGCGACAATTTGGGCA+AGG | 0.613537 | 7.1:-1283767 | None:intergenic |
| GTGTGGACACCAGTGGAAGG+AGG | 0.617591 | 7.1:+1283868 | MS.gene025949:CDS |
| TATTTGCCCAATCCAGGCAG+GGG | 0.628783 | 7.1:+1282091 | MS.gene025949:CDS |
| TTACCCAATACTACGAGTCA+CGG | 0.630549 | 7.1:+1282026 | MS.gene025949:CDS |
| TCCATGCGATAACTAGCTTG+AGG | 0.632752 | 7.1:-1283788 | None:intergenic |
| AAAGTGTGGACACCAGTGGA+AGG | 0.634668 | 7.1:+1283865 | MS.gene025949:CDS |
| ATCAAAAGTGTGGACACCAG+TGG | 0.638482 | 7.1:+1283861 | MS.gene025949:CDS |
| GGCAAATATATGGACAAGTG+AGG | 0.649591 | 7.1:-1282076 | None:intergenic |
| ACGGCACATCTCATCGCACA+AGG | 0.653666 | 7.1:+1282045 | MS.gene025949:CDS |
| GAGTGCTTGAATCAAAAGTG+TGG | 0.674641 | 7.1:+1283851 | MS.gene025949:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTAACATTTTTTATGGTT+TGG | + | chr7.1:1283204-1283223 | MS.gene025949:intron | 15.0% |
| !! | AAAGAAATAACAAAGAAACA+AGG | - | chr7.1:1283679-1283698 | None:intergenic | 20.0% |
| !! | AATTAACATTGTTTATGGTT+TGG | + | chr7.1:1283339-1283358 | MS.gene025949:intron | 20.0% |
| !! | AGAAAAGGAAGAAATAAAAA+TGG | - | chr7.1:1283712-1283731 | None:intergenic | 20.0% |
| !! | TTCTTAAAAGCTCATAAATA+TGG | - | chr7.1:1282806-1282825 | None:intergenic | 20.0% |
| !! | TTGTGAATTAACATTGTTTA+TGG | + | chr7.1:1283334-1283353 | MS.gene025949:intron | 20.0% |
| !!! | AATACTGTTTGTTTTTGTTA+AGG | + | chr7.1:1283632-1283651 | MS.gene025949:intron | 20.0% |
| !!! | ATACATGATAAAAGTATTAC+AGG | - | chr7.1:1282692-1282711 | None:intergenic | 20.0% |
| !!! | ATACTGTTTGTTTTTGTTAA+GGG | + | chr7.1:1283633-1283652 | MS.gene025949:intron | 20.0% |
| !!! | ATCATGTTTTTTTACTTTAC+AGG | + | chr7.1:1282190-1282209 | MS.gene025949:intron | 20.0% |
| !!! | CTTTTCTTTTACATGATTTA+CGG | + | chr7.1:1283162-1283181 | MS.gene025949:intron | 20.0% |
| !!! | TAATACTGTTTTGTTCTTTT+TGG | + | chr7.1:1283599-1283618 | MS.gene025949:intron | 20.0% |
| !!! | TGTCTTTTTTACATGATTTA+CGG | + | chr7.1:1283432-1283451 | MS.gene025949:intron | 20.0% |
| !!! | TGTCTTTTTTACATGATTTT+CGG | + | chr7.1:1283297-1283316 | MS.gene025949:intron | 20.0% |
| !!! | TTGCGAATTAACATTTTTTA+TGG | + | chr7.1:1283199-1283218 | MS.gene025949:intron | 20.0% |
| ! | AACTAATTGGGTAATAGAAA+TGG | - | chr7.1:1282142-1282161 | None:intergenic | 25.0% |
| ! | AAGAAAGAAAGATGAATTGA+AGG | - | chr7.1:1282166-1282185 | None:intergenic | 25.0% |
| ! | AGAACAAAACAGTATTACAA+CGG | - | chr7.1:1283596-1283615 | None:intergenic | 25.0% |
| ! | ATAGCTTAAAAGTTCCTATT+AGG | - | chr7.1:1282925-1282944 | None:intergenic | 25.0% |
| ! | ATGAATTGAAGGTAACTAAT+TGG | - | chr7.1:1282155-1282174 | None:intergenic | 25.0% |
| ! | CATAAACCTTCCAAATATAT+TGG | - | chr7.1:1282643-1282662 | None:intergenic | 25.0% |
| ! | CATATCAAATTTCTGTGATT+TGG | + | chr7.1:1282751-1282770 | MS.gene025949:intron | 25.0% |
| ! | CTTTAGTCAATAAGATAAGA+GGG | - | chr7.1:1282518-1282537 | None:intergenic | 25.0% |
| ! | GAAAAAAAGAAAAGAGGAAT+GGG | - | chr7.1:1283737-1283756 | None:intergenic | 25.0% |
| ! | GATATAACTCCTAATAAGAA+TGG | + | chr7.1:1282963-1282982 | MS.gene025949:intron | 25.0% |
| ! | TAAAAGAAAAGTAGTACTGT+CGG | - | chr7.1:1282303-1282322 | None:intergenic | 25.0% |
| ! | TAAACTCAAAAGTTCCTATT+AGG | - | chr7.1:1283092-1283111 | None:intergenic | 25.0% |
| ! | TCTTTAGTCAATAAGATAAG+AGG | - | chr7.1:1282519-1282538 | None:intergenic | 25.0% |
| ! | TGAATTGAAGGTAACTAATT+GGG | - | chr7.1:1282154-1282173 | None:intergenic | 25.0% |
| ! | TTTAGTCAATAAGATAAGAG+GGG | - | chr7.1:1282517-1282536 | None:intergenic | 25.0% |
| ! | TTTGATTATCAACTCCTAAT+AGG | + | chr7.1:1282883-1282902 | MS.gene025949:intron | 25.0% |
| ! | TTTGATTATCAACTCCTAAT+TGG | + | chr7.1:1282883-1282902 | MS.gene025949:intron | 25.0% |
| !! | AACTGATTGTACTAGTTTAT+TGG | + | chr7.1:1282456-1282475 | MS.gene025949:intron | 25.0% |
| !! | ATTTATGGTCTTTAAGAAGT+AGG | + | chr7.1:1283001-1283020 | MS.gene025949:intron | 25.0% |
| !! | GAAATTTGATATGTATTGAC+AGG | - | chr7.1:1282744-1282763 | None:intergenic | 25.0% |
| !! | TTTATGGTCTTTAAGAAGTA+GGG | + | chr7.1:1283002-1283021 | MS.gene025949:intron | 25.0% |
| !!! | ATTCTTGTTGATTTCATCAT+GGG | - | chr7.1:1282270-1282289 | None:intergenic | 25.0% |
| !!! | GTGATTTGGTTTTAACTTTA+AGG | + | chr7.1:1282765-1282784 | MS.gene025949:intron | 25.0% |
| !!! | TATTCTTGTTGATTTCATCA+TGG | - | chr7.1:1282271-1282290 | None:intergenic | 25.0% |
| !!! | TTATGAGCTTTTAAGAAGTA+GGG | + | chr7.1:1282809-1282828 | MS.gene025949:intron | 25.0% |
| !!! | TTTATGAGCTTTTAAGAAGT+AGG | + | chr7.1:1282808-1282827 | MS.gene025949:intron | 25.0% |
| !!! | TTTGGTTTTAACTTTAAGGA+CGG | + | chr7.1:1282769-1282788 | MS.gene025949:intron | 25.0% |
| AAGTATTACAGGCTTAGATT+TGG | - | chr7.1:1282681-1282700 | None:intergenic | 30.0% | |
| AATTAACATTGTTCCTGGTT+TGG | + | chr7.1:1283474-1283493 | MS.gene025949:intron | 30.0% | |
| AGCAAGACAAACTTAATACA+AGG | - | chr7.1:1283119-1283138 | None:intergenic | 30.0% | |
| ATCTAATGCAAAGGGATAAA+TGG | + | chr7.1:1282560-1282579 | MS.gene025949:intron | 30.0% | |
| ATTTCATCATGGGAGATAAT+AGG | - | chr7.1:1282260-1282279 | None:intergenic | 30.0% | |
| GGAAAAAAAGAAAAGAGGAA+TGG | - | chr7.1:1283738-1283757 | None:intergenic | 30.0% | |
| TACAGGTTAAGATTAAGAGA+AGG | + | chr7.1:1282207-1282226 | MS.gene025949:intron | 30.0% | |
| TATGCTCAAAGCTGTATTTA+TGG | + | chr7.1:1282986-1283005 | MS.gene025949:intron | 30.0% | |
| TCTAATGCAAAGGGATAAAT+GGG | + | chr7.1:1282561-1282580 | MS.gene025949:intron | 30.0% | |
| TGAATGTGATCTAATGCAAA+GGG | + | chr7.1:1282552-1282571 | MS.gene025949:intron | 30.0% | |
| TTGAATGTGATCTAATGCAA+AGG | + | chr7.1:1282551-1282570 | MS.gene025949:intron | 30.0% | |
| TTGAGCATACCATTCTTATT+AGG | - | chr7.1:1282975-1282994 | None:intergenic | 30.0% | |
| TTGAGGTCATCCAATATATT+TGG | + | chr7.1:1282630-1282649 | MS.gene025949:intron | 30.0% | |
| TTGTGAATTAACATTGTTCC+TGG | + | chr7.1:1283469-1283488 | MS.gene025949:intron | 30.0% | |
| TTTCATCATGGGAGATAATA+GGG | - | chr7.1:1282259-1282278 | None:intergenic | 30.0% | |
| ! | CATGTAAAAGAAAAGCACAA+TGG | - | chr7.1:1283157-1283176 | None:intergenic | 30.0% |
| !! | TATGAGCTTTTAAGAAGTAG+GGG | + | chr7.1:1282810-1282829 | MS.gene025949:intron | 30.0% |
| !! | TTATGGTTTGGTTATATGAG+CGG | + | chr7.1:1283216-1283235 | MS.gene025949:intron | 30.0% |
| AGGAGGGAAAAAAAGAAAAG+AGG | - | chr7.1:1283743-1283762 | None:intergenic | 35.0% | |
| CACTCGTAAAATATTGTTGC+AGG | - | chr7.1:1283836-1283855 | None:intergenic | 35.0% | |
| CTAATGCAAAGGGATAAATG+GGG | + | chr7.1:1282562-1282581 | MS.gene025949:intron | 35.0% | |
| GGTCATCCAATATATTTGGA+AGG | + | chr7.1:1282634-1282653 | MS.gene025949:intron | 35.0% | |
| TACATGATTTACGGTTTGAG+CGG | + | chr7.1:1283171-1283190 | MS.gene025949:intron | 35.0% | |
| TTGACTCAACAGTTCCAATT+AGG | - | chr7.1:1282900-1282919 | None:intergenic | 35.0% | |
| ! | TATTTTTCCTAGCACTGTTG+AGG | + | chr7.1:1282613-1282632 | MS.gene025949:intron | 35.0% |
| ! | TCATTGTGGACTTGTTTACT+TGG | + | chr7.1:1282370-1282389 | MS.gene025949:intron | 35.0% |
| ! | TGTACTAGTTTATTGGACGT+TGG | + | chr7.1:1282463-1282482 | MS.gene025949:intron | 35.0% |
| !! | TACATGATTTTCGGTTTGAG+CGG | + | chr7.1:1283306-1283325 | MS.gene025949:intron | 35.0% |
| AAAGAGGAATGGGTGAGAAA+AGG | - | chr7.1:1283727-1283746 | None:intergenic | 40.0% | |
| AAGTAGGGAAGTAGAAGTCA+TGG | + | chr7.1:1283017-1283036 | MS.gene025949:intron | 40.0% | |
| AGTCCACAATGAGCTAAAGA+AGG | - | chr7.1:1282362-1282381 | None:intergenic | 40.0% | |
| CTGTTGAGTCAACTCCTAAT+AGG | + | chr7.1:1282908-1282927 | MS.gene025949:intron | 40.0% | |
| GAGTGCTTGAATCAAAAGTG+TGG | + | chr7.1:1283851-1283870 | MS.gene025949:CDS | 40.0% | |
| GGCAAATATATGGACAAGTG+AGG | - | chr7.1:1282079-1282098 | None:intergenic | 40.0% | |
| TCCATATATTTGCCCAATCC+AGG | + | chr7.1:1282085-1282104 | MS.gene025949:CDS | 40.0% | |
| TTACCCAATACTACGAGTCA+CGG | + | chr7.1:1282026-1282045 | MS.gene025949:CDS | 40.0% | |
| ! | CATCCTTCTTTAGCTCATTG+TGG | + | chr7.1:1282356-1282375 | MS.gene025949:intron | 40.0% |
| ! | TGGGGCTTTAGTTTAGTGTA+AGG | + | chr7.1:1282580-1282599 | MS.gene025949:intron | 40.0% |
| ! | TTCAACCACCGTTTTGTCTA+GGG | + | chr7.1:1283239-1283258 | MS.gene025949:intron | 40.0% |
| !! | TCCTGGTTTGGTTATTTGAG+CGG | + | chr7.1:1283486-1283505 | MS.gene025949:intron | 40.0% |
| !!! | AAAGTAGTACTGTCGGCTTT+TGG | - | chr7.1:1282296-1282315 | None:intergenic | 40.0% |
| ACCGCTCAAATAACCAAACC+AGG | - | chr7.1:1283490-1283509 | None:intergenic | 45.0% | |
| ATATTTGCCCAATCCAGGCA+GGG | + | chr7.1:1282090-1282109 | MS.gene025949:CDS | 45.0% | |
| CTCAAACCAAGACAGAACAG+TGG | - | chr7.1:1283517-1283536 | None:intergenic | 45.0% | |
| CTTGAGGATGGCGACAATTT+GGG | - | chr7.1:1283775-1283794 | None:intergenic | 45.0% | |
| GTTCAACCACTGTTCTGTCT+TGG | + | chr7.1:1283508-1283527 | MS.gene025949:intron | 45.0% | |
| TATATTTGCCCAATCCAGGC+AGG | + | chr7.1:1282089-1282108 | MS.gene025949:CDS | 45.0% | |
| TATTACAACGGACATCGAGC+AGG | - | chr7.1:1283584-1283603 | None:intergenic | 45.0% | |
| TCCTCAAGCTAGTTATCGCA+TGG | + | chr7.1:1283787-1283806 | MS.gene025949:CDS | 45.0% | |
| ! | AATTTGGGCAAGGTACTAGG+AGG | - | chr7.1:1283760-1283779 | None:intergenic | 45.0% |
| ! | AGTAGGGGAAGTATAAGTCG+TGG | + | chr7.1:1282825-1282844 | MS.gene025949:intron | 45.0% |
| ! | ATCAAAAGTGTGGACACCAG+TGG | + | chr7.1:1283861-1283880 | MS.gene025949:CDS | 45.0% |
| ! | ATGGAGTTTTGCCCTATGTG+TGG | + | chr7.1:1281984-1282003 | MS.gene025949:CDS | 45.0% |
| ! | ATTTGGGCAAGGTACTAGGA+GGG | - | chr7.1:1283759-1283778 | None:intergenic | 45.0% |
| ! | CTGTTCTGTCTTGGTTTGAG+CGG | + | chr7.1:1283517-1283536 | MS.gene025949:intron | 45.0% |
| ! | GACAATTTGGGCAAGGTACT+AGG | - | chr7.1:1283763-1283782 | None:intergenic | 45.0% |
| ! | GCCTGGATTGGGCAAATATA+TGG | - | chr7.1:1282089-1282108 | None:intergenic | 45.0% |
| ! | GTTCAACCACCGTTTTGTCT+AGG | + | chr7.1:1283238-1283257 | MS.gene025949:intron | 45.0% |
| ! | TCCATGCGATAACTAGCTTG+AGG | - | chr7.1:1283791-1283810 | None:intergenic | 45.0% |
| ! | TGCGATAACTAGCTTGAGGA+TGG | - | chr7.1:1283787-1283806 | None:intergenic | 45.0% |
| ! | TGGAGTTTTGCCCTATGTGT+GGG | + | chr7.1:1281985-1282004 | MS.gene025949:CDS | 45.0% |
| AAAGTGTGGACACCAGTGGA+AGG | + | chr7.1:1283865-1283884 | MS.gene025949:CDS | 50.0% | |
| AACATACCCCTGCCTGGATT+GGG | - | chr7.1:1282100-1282119 | None:intergenic | 50.0% | |
| AGAGAAGGCAAATGCTCGTC+AGG | + | chr7.1:1282222-1282241 | MS.gene025949:CDS | 50.0% | |
| AGGCAAATGCTCGTCAGGAA+AGG | + | chr7.1:1282227-1282246 | MS.gene025949:CDS | 50.0% | |
| ATCAGCATGCTCCCACACAT+AGG | - | chr7.1:1281999-1282018 | None:intergenic | 50.0% | |
| CCGCTTGACCCTAGACAAAA+CGG | - | chr7.1:1283385-1283404 | None:intergenic | 50.0% | |
| CTTGACCCTAGACAAAACGG+TGG | - | chr7.1:1283382-1283401 | None:intergenic | 50.0% | |
| GCTTGAGGATGGCGACAATT+TGG | - | chr7.1:1283776-1283795 | None:intergenic | 50.0% | |
| GGCAAATGCTCGTCAGGAAA+GGG | + | chr7.1:1282228-1282247 | MS.gene025949:CDS | 50.0% | |
| GGGAAGTAGAAGTCATGGTC+TGG | + | chr7.1:1283022-1283041 | MS.gene025949:intron | 50.0% | |
| GTACATAACATACCCCTGCC+TGG | - | chr7.1:1282106-1282125 | None:intergenic | 50.0% | |
| GTGCCGTGACTCGTAGTATT+GGG | - | chr7.1:1282032-1282051 | None:intergenic | 50.0% | |
| TAACATACCCCTGCCTGGAT+TGG | - | chr7.1:1282101-1282120 | None:intergenic | 50.0% | |
| TATTTGCCCAATCCAGGCAG+GGG | + | chr7.1:1282091-1282110 | MS.gene025949:CDS | 50.0% | |
| TCAGCATGCTCCCACACATA+GGG | - | chr7.1:1281998-1282017 | None:intergenic | 50.0% | |
| TGGATGACCTCAACAGTGCT+AGG | - | chr7.1:1282623-1282642 | None:intergenic | 50.0% | |
| TGTGCCGTGACTCGTAGTAT+TGG | - | chr7.1:1282033-1282052 | None:intergenic | 50.0% | |
| ! | GGGAAGTATAAGTCGTGGTG+TGG | + | chr7.1:1282830-1282849 | MS.gene025949:intron | 50.0% |
| !! | CCGTTTTGTCTAGGGTCAAG+CGG | + | chr7.1:1283382-1283401 | MS.gene025949:intron | 50.0% |
| ACGGCACATCTCATCGCACA+AGG | + | chr7.1:1282045-1282064 | MS.gene025949:CDS | 55.0% | |
| CCGCTCGACCCTAGACAAAA+CGG | - | chr7.1:1283250-1283269 | None:intergenic | 55.0% | |
| CTCGACCCTAGACAAAACGG+TGG | - | chr7.1:1283247-1283266 | None:intergenic | 55.0% | |
| GGATGGCGACAATTTGGGCA+AGG | - | chr7.1:1283770-1283789 | None:intergenic | 55.0% | |
| TGTGGACACCAGTGGAAGGA+GGG | + | chr7.1:1283869-1283888 | MS.gene025949:CDS | 55.0% | |
| !! | CCGTTTTGTCTAGGGTCGAG+CGG | + | chr7.1:1283247-1283266 | MS.gene025949:intron | 55.0% |
| GTGTGGACACCAGTGGAAGG+AGG | + | chr7.1:1283868-1283887 | MS.gene025949:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 1281984 | 1283895 | 1281984 | ID=MS.gene025949 |
| chr7.1 | mRNA | 1281984 | 1283895 | 1281984 | ID=MS.gene025949.t1;Parent=MS.gene025949 |
| chr7.1 | exon | 1281984 | 1282112 | 1281984 | ID=MS.gene025949.t1.exon1;Parent=MS.gene025949.t1 |
| chr7.1 | CDS | 1281984 | 1282112 | 1281984 | ID=cds.MS.gene025949.t1;Parent=MS.gene025949.t1 |
| chr7.1 | exon | 1282212 | 1282305 | 1282212 | ID=MS.gene025949.t1.exon2;Parent=MS.gene025949.t1 |
| chr7.1 | CDS | 1282212 | 1282305 | 1282212 | ID=cds.MS.gene025949.t1;Parent=MS.gene025949.t1 |
| chr7.1 | exon | 1283765 | 1283895 | 1283765 | ID=MS.gene025949.t1.exon3;Parent=MS.gene025949.t1 |
| chr7.1 | CDS | 1283765 | 1283895 | 1283765 | ID=cds.MS.gene025949.t1;Parent=MS.gene025949.t1 |
| Gene Sequence |
| Protein sequence |
